locus-tag	class	description
VIBHAR_00005	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VIBHAR_00009	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIBHAR_00010	COG0735	belongs to the Fur family
VIBHAR_00014	COG0432	Pfam Uncharacterised protein family UPF0047
VIBHAR_00016	COG3385	transposase activity
VIBHAR_00017	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VIBHAR_00018	COG0305	Participates in initiation and elongation during chromosome replication
VIBHAR_00022	COG2965	DNA replication, synthesis of RNA primer
VIBHAR_00024	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
VIBHAR_00025	COG0338	D12 class N6 adenine-specific DNA methyltransferase
VIBHAR_00034	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
VIBHAR_00036	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VIBHAR_00036	COG0678	peroxiredoxin activity
VIBHAR_00037	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBHAR_00040	COG0165	Argininosuccinate lyase
VIBHAR_00040	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VIBHAR_00043	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
VIBHAR_00045	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
VIBHAR_00047	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VIBHAR_00048	COG0527	aspartate kinase activity
VIBHAR_00048	COG0460	homoserine dehydrogenase
VIBHAR_00049	COG0626	cystathionine gamma-synthase activity
VIBHAR_00051	COG0281	malic enzyme
VIBHAR_00053	COG2906	2 iron, 2 sulfur cluster binding
VIBHAR_00055	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VIBHAR_00058	COG2168	tRNA wobble position uridine thiolation
VIBHAR_00059	COG2923	Belongs to the DsrF TusC family
VIBHAR_00060	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
VIBHAR_00061	COG2964	Protein conserved in bacteria
VIBHAR_00062	COG0545	Peptidyl-prolyl cis-trans isomerase
VIBHAR_00065	COG1446	asparaginase
VIBHAR_00066	COG1047	Peptidyl-prolyl cis-trans
VIBHAR_00069	COG2249	NAD(P)H dehydrogenase (quinone) activity
VIBHAR_00070	COG0488	(ABC) transporter
VIBHAR_00072	COG0429	hydrolase of the alpha beta-hydrolase fold
VIBHAR_00074	COG3954	Phosphoribulokinase
VIBHAR_00075	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBHAR_00079	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VIBHAR_00080	COG0512	Glutamine amidotransferase of anthranilate synthase
VIBHAR_00083	COG0546	phosphoglycolate phosphatase activity
VIBHAR_00084	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIBHAR_00085	COG0557	exoribonuclease II activity
VIBHAR_00087	COG1017	nitric oxide dioxygenase activity
VIBHAR_00087	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VIBHAR_00088	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
VIBHAR_00089	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VIBHAR_00090	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
VIBHAR_00091	COG0330	HflC and HflK could
VIBHAR_00092	COG0330	HflC and HflK could
VIBHAR_00093	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VIBHAR_00096	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VIBHAR_00097	COG0860	N-Acetylmuramoyl-L-alanine amidase
VIBHAR_00098	COG0802	atpase or kinase
VIBHAR_00099	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VIBHAR_00113	COG1162	GTPase activity
VIBHAR_00118	COG0471	metal ion transport
VIBHAR_00122	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VIBHAR_00125	COG1045	serine acetyltransferase
VIBHAR_00126	COG4942	peptidase
VIBHAR_00131	COG1053	succinate dehydrogenase
VIBHAR_00132	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
VIBHAR_00138	COG1509	lysine 2,3-aminomutase activity
VIBHAR_00141	COG3344	reverse transcriptase
VIBHAR_00143	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VIBHAR_00144	COG0534	Mate efflux family protein
VIBHAR_00149	COG0745	RESPONSE REGULATOR receiver
VIBHAR_00150	COG2205	protein histidine kinase activity
VIBHAR_00152	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
VIBHAR_00153	COG3030	protein affecting phage T7 exclusion by the F plasmid
VIBHAR_00154	COG1027	Aspartate ammonia-lyase
VIBHAR_00155	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VIBHAR_00156	COG4232	protein-disulfide reductase activity
VIBHAR_00158	COG2095	MarC family integral membrane protein
VIBHAR_00160	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VIBHAR_00164	COG2205	protein histidine kinase activity
VIBHAR_00164	COG0784	Response regulator, receiver
VIBHAR_00166	COG2814	Major facilitator Superfamily
VIBHAR_00169	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIBHAR_00170	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VIBHAR_00171	COG0511	ligase activity, forming carbon-carbon bonds
VIBHAR_00172	COG0439	Biotin carboxylase
VIBHAR_00174	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIBHAR_00175	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
VIBHAR_00176	COG5001	Diguanylate cyclase
VIBHAR_00176	COG3300	MHYT domain
VIBHAR_00179	COG2433	Pfam Transposase IS66
VIBHAR_00182	COG4584	PFAM Integrase catalytic
VIBHAR_00183	COG1484	DNA-dependent DNA replication
VIBHAR_00184	COG3335	DDE superfamily endonuclease
VIBHAR_00186	COG3335	DDE superfamily endonuclease
VIBHAR_00188	COG3335	DDE superfamily endonuclease
VIBHAR_00190	COG3335	DDE superfamily endonuclease
VIBHAR_00192	COG3335	DDE superfamily endonuclease
VIBHAR_00205	COG1982	Orn Lys Arg decarboxylase major
VIBHAR_00206	COG0531	amino acid
VIBHAR_00207	COG3710	Transcriptional regulator
VIBHAR_00208	COG0789	Transcriptional regulator
VIBHAR_00211	COG0151	Belongs to the GarS family
VIBHAR_00214	COG1253	flavin adenine dinucleotide binding
VIBHAR_00215	COG3068	Protein conserved in bacteria
VIBHAR_00217	COG1573	uracil-dna glycosylase
VIBHAR_00222	COG2816	NAD+ diphosphatase activity
VIBHAR_00223	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
VIBHAR_00227	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VIBHAR_00230	COG0250	Participates in transcription elongation, termination and antitermination
VIBHAR_00231	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VIBHAR_00241	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VIBHAR_00243	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VIBHAR_00266	COG0534	Mate efflux family protein
VIBHAR_00269	COG2937	Belongs to the GPAT DAPAT family
VIBHAR_00271	COG3344	reverse transcriptase
VIBHAR_00273	COG3161	chorismate lyase activity
VIBHAR_00274	COG1580	Controls the rotational direction of flagella during chemotaxis
VIBHAR_00275	COG0705	Rhomboid family
VIBHAR_00278	COG2177	Part of the ABC transporter FtsEX involved in
VIBHAR_00279	COG2884	Cell division ATP-binding protein ftsE
VIBHAR_00280	COG0552	protein localization to endoplasmic reticulum
VIBHAR_00281	COG0742	ribosomal rna small subunit methyltransferase
VIBHAR_00283	COG2095	MarC family integral membrane protein
VIBHAR_00289	COG3293	Transposase
VIBHAR_00296	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VIBHAR_00297	COG0640	Transcriptional regulator
VIBHAR_00298	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VIBHAR_00299	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_00300	COG2267	carboxylic ester hydrolase activity
VIBHAR_00301	COG0561	phosphatase activity
VIBHAR_00305	COG2199	diguanylate cyclase activity
VIBHAR_00305	COG3287	FIST C domain
VIBHAR_00305	COG2200	EAL domain
VIBHAR_00306	COG1011	Hydrolase
VIBHAR_00310	COG0019	diaminopimelate decarboxylase activity
VIBHAR_00313	COG3072	Adenylate cyclase
VIBHAR_00315	COG1587	Uroporphyrinogen-III synthase
VIBHAR_00316	COG2959	enzyme of heme biosynthesis
VIBHAR_00317	COG3071	HemY protein
VIBHAR_00319	COG3335	DDE superfamily endonuclease
VIBHAR_00321	COG3335	DDE superfamily endonuclease
VIBHAR_00323	COG3335	DDE superfamily endonuclease
VIBHAR_00333	COG0633	Ferredoxin
VIBHAR_00334	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
VIBHAR_00336	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
VIBHAR_00337	COG3118	belongs to the thioredoxin family
VIBHAR_00341	COG3344	reverse transcriptase
VIBHAR_00342	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
VIBHAR_00344	COG0514	ATP-dependent DNA helicase (RecQ)
VIBHAR_00345	COG2962	Rard protein
VIBHAR_00347	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_00348	COG0405	Gamma-glutamyltransferase
VIBHAR_00350	COG3344	reverse transcriptase
VIBHAR_00351	COG0210	DNA helicase
VIBHAR_00353	COG3220	belongs to the UPF0276 family
VIBHAR_00358	COG2814	Major facilitator Superfamily
VIBHAR_00360	COG0006	proline dipeptidase activity
VIBHAR_00360	COG0006	proline dipeptidase activity
VIBHAR_00363	COG2104	thiamine diphosphate biosynthetic process
VIBHAR_00364	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VIBHAR_00368	COG2132	Multicopper oxidase
VIBHAR_00370	COG3335	DDE superfamily endonuclease
VIBHAR_00372	COG3335	DDE superfamily endonuclease
VIBHAR_00380	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VIBHAR_00385	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
VIBHAR_00386	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
VIBHAR_00387	COG0551	DNA topoisomerase type I activity
VIBHAR_00389	COG0758	DNA mediated transformation
VIBHAR_00393	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VIBHAR_00393	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VIBHAR_00394	COG0569	domain protein
VIBHAR_00395	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIBHAR_00397	COG1272	protein, Hemolysin III
VIBHAR_00398	COG4326	sporulation control protein
VIBHAR_00401	COG3084	Protein conserved in bacteria
VIBHAR_00403	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
VIBHAR_00404	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VIBHAR_00405	COG3385	transposase activity
VIBHAR_00406	COG0204	Acyl-transferase
VIBHAR_00408	COG2199	diguanylate cyclase activity
VIBHAR_00409	COG0606	chelatase, subunit chli
VIBHAR_00411	COG3978	acetolactate synthase activity
VIBHAR_00412	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VIBHAR_00413	COG0129	dihydroxy-acid dehydratase activity
VIBHAR_00415	COG0583	DNA-binding transcription factor activity
VIBHAR_00416	COG2814	Major facilitator Superfamily
VIBHAR_00417	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBHAR_00418	COG0765	amino acid transport
VIBHAR_00420	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VIBHAR_00422	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VIBHAR_00423	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VIBHAR_00429	COG3312	ion transport
VIBHAR_00430	COG1475	DNA binding
VIBHAR_00431	COG1192	Involved in chromosome partitioning
VIBHAR_00434	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VIBHAR_00439	COG1126	abc transporter atp-binding protein
VIBHAR_00443	COG0592	DNA-directed DNA polymerase activity
VIBHAR_00445	COG0187	DNA topoisomerase II activity
VIBHAR_00446	COG0071	Belongs to the small heat shock protein (HSP20) family
VIBHAR_00447	COG3977	Valine--pyruvate aminotransferase
VIBHAR_00448	COG3385	transposase activity
VIBHAR_00451	COG2119	membrane
VIBHAR_00458	COG0604	alcohol dehydrogenase
VIBHAR_00459	COG0183	Belongs to the thiolase family
VIBHAR_00461	COG1739	Uncharacterized protein family UPF0029
VIBHAR_00462	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIBHAR_00474	COG3335	DDE superfamily endonuclease
VIBHAR_00475	COG3335	DDE superfamily endonuclease
VIBHAR_00477	COG0583	DNA-binding transcription factor activity
VIBHAR_00478	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VIBHAR_00479	COG2960	long-chain fatty acid transporting porin activity
VIBHAR_00480	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBHAR_00481	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_00493	COG4166	transmembrane transport
VIBHAR_00495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBHAR_00502	COG3293	Transposase
VIBHAR_00506	COG0515	serine threonine protein kinase
VIBHAR_00507	COG1609	Transcriptional regulator
VIBHAR_00508	COG0583	DNA-binding transcription factor activity
VIBHAR_00509	COG2076	Multidrug Resistance protein
VIBHAR_00511	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_00512	COG0129	dihydroxy-acid dehydratase activity
VIBHAR_00513	COG3265	gluconokinase activity
VIBHAR_00514	COG2610	gluconate transmembrane transporter activity
VIBHAR_00515	COG0800	Aldolase
VIBHAR_00516	COG1278	Cold shock
VIBHAR_00523	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBHAR_00525	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
VIBHAR_00527	COG1522	sequence-specific DNA binding
VIBHAR_00528	COG5001	Diguanylate cyclase
VIBHAR_00528	COG5002	protein histidine kinase activity
VIBHAR_00531	COG0697	spore germination
VIBHAR_00532	COG0589	response to stress
VIBHAR_00534	COG1528	Iron-storage protein
VIBHAR_00536	COG2081	HI0933 family
VIBHAR_00540	COG4372	Transposase
VIBHAR_00548	COG3469	chitinase activity
VIBHAR_00556	COG1910	domain protein
VIBHAR_00557	COG3293	Transposase
VIBHAR_00558	COG3385	transposase activity
VIBHAR_00561	COG1322	Protein conserved in bacteria
VIBHAR_00563	COG3165	ubiquinone biosynthetic process from chorismate
VIBHAR_00567	COG0805	protein transport
VIBHAR_00569	COG0084	hydrolase, TatD family'
VIBHAR_00572	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIBHAR_00572	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VIBHAR_00574	COG0218	Necessary for normal cell division and for the maintenance of normal septation
VIBHAR_00581	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VIBHAR_00582	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VIBHAR_00584	COG2204	response regulator
VIBHAR_00585	COG3852	Histidine kinase
VIBHAR_00588	COG0174	glutamine synthetase
VIBHAR_00594	COG1490	D-aminoacyl-tRNA deacylase activity
VIBHAR_00595	COG0456	acetyltransferase
VIBHAR_00599	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VIBHAR_00600	COG3031	protein transport across the cell outer membrane
VIBHAR_00602	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VIBHAR_00603	COG1459	type II secretion system
VIBHAR_00604	COG2165	general secretion pathway protein
VIBHAR_00605	COG2165	general secretion pathway protein
VIBHAR_00606	COG2165	general secretion pathway protein
VIBHAR_00607	COG4795	General secretion pathway protein
VIBHAR_00608	COG3156	type II secretion system protein K
VIBHAR_00609	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VIBHAR_00610	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VIBHAR_00612	COG1218	3'(2'),5'-bisphosphate nucleotidase
VIBHAR_00613	COG0494	nUDIX hydrolase
VIBHAR_00615	COG1040	competence protein
VIBHAR_00618	COG2183	response to ionizing radiation
VIBHAR_00620	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VIBHAR_00621	COG0745	RESPONSE REGULATOR receiver
VIBHAR_00622	COG2205	protein histidine kinase activity
VIBHAR_00623	COG2233	PERMEase
VIBHAR_00625	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VIBHAR_00626	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIBHAR_00627	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VIBHAR_00629	COG1758	RNA polymerase activity
VIBHAR_00630	COG0194	GDP metabolic process
VIBHAR_00634	COG0848	biopolymer transport protein
VIBHAR_00635	COG0811	peptide transport
VIBHAR_00639	COG4174	ABC transporter (Permease)
VIBHAR_00640	COG4239	(ABC) transporter, permease
VIBHAR_00641	COG0747	negative chemotaxis
VIBHAR_00642	COG0444	Belongs to the ABC transporter superfamily
VIBHAR_00643	COG4608	Belongs to the ABC transporter superfamily
VIBHAR_00647	COG1561	YicC-like family, N-terminal region
VIBHAR_00648	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
VIBHAR_00650	COG1560	Kdo2-lipid A biosynthetic process
VIBHAR_00652	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
VIBHAR_00660	COG0438	transferase activity, transferring glycosyl groups
VIBHAR_00661	COG0463	Glycosyl transferase, family 2
VIBHAR_00662	COG0859	PFAM glycosyl transferase family 9
VIBHAR_00663	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VIBHAR_00664	COG3642	lipopolysaccharide core region biosynthetic process
VIBHAR_00668	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
VIBHAR_00670	COG2089	acid synthase
VIBHAR_00671	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
VIBHAR_00675	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VIBHAR_00677	COG1083	cytidylyl-transferase
VIBHAR_00679	COG1519	Transferase
VIBHAR_00681	COG1560	Kdo2-lipid A biosynthetic process
VIBHAR_00683	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBHAR_00689	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
VIBHAR_00690	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
VIBHAR_00704	COG1482	cell wall glycoprotein biosynthetic process
VIBHAR_00705	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VIBHAR_00709	COG0149	triose-phosphate isomerase activity
VIBHAR_00712	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_00717	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_00718	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_00719	COG1494	fructose-1,6-bisphosphatase
VIBHAR_00721	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VIBHAR_00722	COG1575	Belongs to the MenA family. Type 1 subfamily
VIBHAR_00726	COG1609	Transcriptional regulator
VIBHAR_00727	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VIBHAR_00748	COG1841	ribosomal large subunit assembly
VIBHAR_00750	COG0201	protein transport
VIBHAR_00752	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
VIBHAR_00755	COG0203	ribosomal protein L17
VIBHAR_00757	COG0545	Peptidyl-prolyl cis-trans isomerase
VIBHAR_00759	COG3344	reverse transcriptase
VIBHAR_00761	COG2153	protein acetylation
VIBHAR_00762	COG0513	Belongs to the DEAD box helicase family
VIBHAR_00764	COG0737	Belongs to the 5'-nucleotidase family
VIBHAR_00765	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VIBHAR_00765	COG1648	precorrin-2 dehydrogenase activity
VIBHAR_00768	COG0471	metal ion transport
VIBHAR_00768	COG3273	potassium ion transport
VIBHAR_00769	COG0529	Catalyzes the synthesis of activated sulfate
VIBHAR_00773	COG1136	(ABC) transporter
VIBHAR_00776	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
VIBHAR_00778	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBHAR_00779	COG0729	surface antigen
VIBHAR_00781	COG2105	PFAM AIG2 family protein
VIBHAR_00783	COG3385	transposase activity
VIBHAR_00784	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
VIBHAR_00786	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VIBHAR_00787	COG0163	prenyltransferase activity
VIBHAR_00788	COG4143	(ABC) transporter
VIBHAR_00789	COG1178	ABC-type Fe3 transport system permease component
VIBHAR_00790	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
VIBHAR_00797	COG3385	transposase activity
VIBHAR_00798	COG0142	geranyltranstransferase activity
VIBHAR_00800	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VIBHAR_00803	COG2966	Psort location CytoplasmicMembrane, score
VIBHAR_00804	COG3610	response to peptide
VIBHAR_00809	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VIBHAR_00810	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VIBHAR_00811	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
VIBHAR_00812	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
VIBHAR_00816	COG0473	3-isopropylmalate dehydrogenase activity
VIBHAR_00817	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VIBHAR_00823	COG0583	DNA-binding transcription factor activity
VIBHAR_00824	COG1022	Amp-dependent synthetase and ligase
VIBHAR_00825	COG0028	Belongs to the TPP enzyme family
VIBHAR_00826	COG0440	acetolactate synthase activity
VIBHAR_00827	COG3706	GGDEF domain
VIBHAR_00829	COG0469	pyruvate kinase activity
VIBHAR_00830	COG1349	DNA-binding transcription factor activity
VIBHAR_00831	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VIBHAR_00832	COG3722	fumarate hydratase activity
VIBHAR_00834	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_00834	COG2213	PTS system mannitol-specific
VIBHAR_00839	COG0582	viral genome integration into host DNA
VIBHAR_00844	COG2433	Pfam Transposase IS66
VIBHAR_00848	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VIBHAR_00849	COG0358	DNA primase activity
VIBHAR_00850	COG1610	YqeY-like protein
VIBHAR_00851	COG0828	Belongs to the bacterial ribosomal protein bS21 family
VIBHAR_00852	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
VIBHAR_00853	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
VIBHAR_00855	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VIBHAR_00856	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VIBHAR_00859	COG3409	Peptidoglycan-binding domain 1 protein
VIBHAR_00859	COG3267	Type II secretory pathway component ExeA
VIBHAR_00861	COG4991	sh3 domain protein
VIBHAR_00862	COG0306	phosphate transporter
VIBHAR_00863	COG1392	Phosphate transport regulator
VIBHAR_00864	COG3025	triphosphatase activity
VIBHAR_00865	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VIBHAR_00867	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
VIBHAR_00869	COG1538	Outer membrane efflux protein
VIBHAR_00870	COG0494	nUDIX hydrolase
VIBHAR_00871	COG3151	Protein conserved in bacteria
VIBHAR_00873	COG3150	esterase
VIBHAR_00875	COG0187	DNA topoisomerase II activity
VIBHAR_00876	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
VIBHAR_00877	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VIBHAR_00878	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VIBHAR_00879	COG3105	Protein conserved in bacteria
VIBHAR_00880	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
VIBHAR_00883	COG0723	plastoquinol--plastocyanin reductase activity
VIBHAR_00884	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
VIBHAR_00885	COG2857	Cytochrome c1
VIBHAR_00886	COG0625	glutathione transferase activity
VIBHAR_00887	COG2969	positive regulation of protein catabolic process
VIBHAR_00888	COG2823	Periplasmic or secreted lipoprotein
VIBHAR_00889	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VIBHAR_00892	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
VIBHAR_00895	COG3116	cell division
VIBHAR_00896	COG0768	penicillin binding
VIBHAR_00897	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VIBHAR_00898	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VIBHAR_00901	COG0772	Belongs to the SEDS family
VIBHAR_00904	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
VIBHAR_00905	COG0849	cell division
VIBHAR_00906	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
VIBHAR_00910	COG0494	nUDIX hydrolase
VIBHAR_00912	COG0505	Belongs to the CarA family
VIBHAR_00913	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VIBHAR_00918	COG0730	response to heat
VIBHAR_00919	COG0583	DNA-binding transcription factor activity
VIBHAR_00920	COG2860	membrane
VIBHAR_00925	COG0493	'glutamate synthase
VIBHAR_00926	COG0067	glutamate synthase
VIBHAR_00926	COG0070	glutamate synthase
VIBHAR_00926	COG0069	glutamate synthase activity
VIBHAR_00928	COG0069	glutamate synthase activity
VIBHAR_00928	COG0070	glutamate synthase
VIBHAR_00928	COG0067	glutamate synthase
VIBHAR_00929	COG1242	4 iron, 4 sulfur cluster binding
VIBHAR_00930	COG2203	Gaf domain
VIBHAR_00930	COG4251	negative regulation of phosphorylation
VIBHAR_00930	COG3706	GGDEF domain
VIBHAR_00930	COG5001	Diguanylate cyclase
VIBHAR_00931	COG5002	protein histidine kinase activity
VIBHAR_00931	COG2198	Histidine kinase
VIBHAR_00931	COG0784	Response regulator, receiver
VIBHAR_00933	COG0745	RESPONSE REGULATOR receiver
VIBHAR_00934	COG3385	transposase activity
VIBHAR_00936	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VIBHAR_00940	COG0083	homoserine kinase activity
VIBHAR_00941	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VIBHAR_00948	COG1115	amino acid carrier protein
VIBHAR_00949	COG3022	response to hydroperoxide
VIBHAR_00952	COG0513	Belongs to the DEAD box helicase family
VIBHAR_00955	COG0716	FMN binding
VIBHAR_00957	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VIBHAR_00958	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VIBHAR_00959	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
VIBHAR_00964	COG0667	Aldo Keto reductase
VIBHAR_00969	COG0730	response to heat
VIBHAR_00972	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_00974	COG1283	sodium-dependent phosphate transmembrane transporter activity
VIBHAR_00975	COG0583	DNA-binding transcription factor activity
VIBHAR_00976	COG0640	Transcriptional regulator
VIBHAR_00977	COG0268	Binds directly to 16S ribosomal RNA
VIBHAR_00978	COG0728	peptidoglycan biosynthetic process
VIBHAR_00979	COG0196	riboflavin kinase activity
VIBHAR_00982	COG1047	Peptidyl-prolyl cis-trans
VIBHAR_00983	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
VIBHAR_00984	COG3279	Response regulator of the LytR AlgR family
VIBHAR_00985	COG3275	phosphorelay sensor kinase activity
VIBHAR_00986	COG1966	Carbon starvation protein
VIBHAR_00990	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
VIBHAR_00991	COG1472	Belongs to the glycosyl hydrolase 3 family
VIBHAR_00992	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VIBHAR_00993	COG1605	Chorismate mutase
VIBHAR_00993	COG0287	Prephenate dehydrogenase
VIBHAR_00994	COG3385	transposase activity
VIBHAR_00995	COG0739	heme binding
VIBHAR_00997	COG0488	(ABC) transporter
VIBHAR_01000	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
VIBHAR_01001	COG0077	Prephenate dehydratase
VIBHAR_01001	COG1605	Chorismate mutase
VIBHAR_01002	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VIBHAR_01003	COG0741	lytic transglycosylase activity
VIBHAR_01004	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBHAR_01005	COG0564	pseudouridine synthase activity
VIBHAR_01007	COG0542	response to heat
VIBHAR_01017	COG3335	DDE superfamily endonuclease
VIBHAR_01023	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VIBHAR_01026	COG0745	RESPONSE REGULATOR receiver
VIBHAR_01027	COG5002	protein histidine kinase activity
VIBHAR_01029	COG0248	Ppx GppA phosphatase
VIBHAR_01030	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VIBHAR_01031	COG0573	inorganic phosphate transmembrane transporter activity
VIBHAR_01032	COG0581	inorganic phosphate transmembrane transporter activity
VIBHAR_01033	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VIBHAR_01034	COG0704	Plays a role in the regulation of phosphate uptake
VIBHAR_01036	COG3335	DDE superfamily endonuclease
VIBHAR_01039	COG0450	alkyl hydroperoxide reductase
VIBHAR_01040	COG0583	DNA-binding transcription factor activity
VIBHAR_01041	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
VIBHAR_01043	COG0517	IMP dehydrogenase activity
VIBHAR_01047	COG1862	Preprotein translocase
VIBHAR_01048	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIBHAR_01049	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIBHAR_01052	COG0483	inositol monophosphate 1-phosphatase activity
VIBHAR_01053	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
VIBHAR_01056	COG0822	iron-sulfur transferase activity
VIBHAR_01057	COG0316	Belongs to the HesB IscA family
VIBHAR_01060	COG0633	Ferredoxin
VIBHAR_01061	COG2975	iron-sulfur cluster assembly
VIBHAR_01062	COG3385	transposase activity
VIBHAR_01069	COG2976	Protein conserved in bacteria
VIBHAR_01070	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBHAR_01076	COG0516	GMP reductase activity
VIBHAR_01076	COG0517	IMP dehydrogenase activity
VIBHAR_01078	COG1757	Na H antiporter
VIBHAR_01079	COG3385	transposase activity
VIBHAR_01080	COG1757	Na H antiporter
VIBHAR_01082	COG1584	GPR1 FUN34 yaaH family protein
VIBHAR_01083	COG3344	reverse transcriptase
VIBHAR_01084	COG1115	amino acid carrier protein
VIBHAR_01086	COG0583	DNA-binding transcription factor activity
VIBHAR_01087	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VIBHAR_01088	COG0668	transmembrane transport
VIBHAR_01089	COG3335	DDE superfamily endonuclease
VIBHAR_01090	COG3344	reverse transcriptase
VIBHAR_01103	COG2433	Pfam Transposase IS66
VIBHAR_01106	COG1289	transmembrane transporter activity
VIBHAR_01107	COG0583	DNA-binding transcription factor activity
VIBHAR_01118	COG3385	transposase activity
VIBHAR_01119	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VIBHAR_01122	COG0582	viral genome integration into host DNA
VIBHAR_01125	COG2867	negative regulation of translational initiation
VIBHAR_01126	COG2914	Belongs to the UPF0125 (RnfH) family
VIBHAR_01128	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VIBHAR_01129	COG0456	acetyltransferase
VIBHAR_01130	COG0497	DNA recombination
VIBHAR_01133	COG1301	dicarboxylic acid transport
VIBHAR_01141	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VIBHAR_01142	COG0590	tRNA wobble adenosine to inosine editing
VIBHAR_01146	COG2433	Pfam Transposase IS66
VIBHAR_01148	COG2433	Pfam Transposase IS66
VIBHAR_01150	COG0047	phosphoribosylformylglycinamidine synthase activity
VIBHAR_01150	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VIBHAR_01152	COG3293	Transposase
VIBHAR_01156	COG3385	transposase activity
VIBHAR_01157	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIBHAR_01158	COG2252	PERMEase
VIBHAR_01163	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VIBHAR_01165	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
VIBHAR_01166	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VIBHAR_01166	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VIBHAR_01171	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
VIBHAR_01172	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
VIBHAR_01174	COG0142	geranyltranstransferase activity
VIBHAR_01176	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VIBHAR_01181	COG2433	Pfam Transposase IS66
VIBHAR_01183	COG0583	DNA-binding transcription factor activity
VIBHAR_01185	COG2363	Small membrane protein
VIBHAR_01188	COG3293	Transposase
VIBHAR_01190	COG1611	Belongs to the LOG family
VIBHAR_01191	COG3706	GGDEF domain
VIBHAR_01191	COG0745	RESPONSE REGULATOR receiver
VIBHAR_01195	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
VIBHAR_01200	COG1464	Belongs to the NlpA lipoprotein family
VIBHAR_01201	COG2011	ABC-type metal ion transport system permease component
VIBHAR_01202	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
VIBHAR_01203	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VIBHAR_01205	COG1263	PTS System
VIBHAR_01205	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBHAR_01206	COG0366	Alpha amylase catalytic
VIBHAR_01207	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
VIBHAR_01208	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VIBHAR_01209	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01210	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01214	COG1686	Belongs to the peptidase S11 family
VIBHAR_01215	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VIBHAR_01216	COG0772	Belongs to the SEDS family
VIBHAR_01217	COG0768	penicillin binding
VIBHAR_01219	COG0799	negative regulation of ribosome biogenesis
VIBHAR_01220	COG1466	dna polymerase III delta subunit
VIBHAR_01221	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
VIBHAR_01223	COG2888	peptidyl-tyrosine sulfation
VIBHAR_01226	COG0815	Transfers the fatty acyl group on membrane lipoproteins
VIBHAR_01227	COG4535	Mg2 and Co2 transporter CorC
VIBHAR_01229	COG1702	phosphate starvation-inducible protein PhoH
VIBHAR_01232	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBHAR_01244	COG0012	GTP binding
VIBHAR_01246	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VIBHAR_01251	COG2890	protein-(glutamine-N5) methyltransferase activity
VIBHAR_01252	COG3094	Invasion gene expression up-regulator, SirB
VIBHAR_01253	COG2912	Transglutaminase-like superfamily
VIBHAR_01256	COG0737	Belongs to the 5'-nucleotidase family
VIBHAR_01257	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
VIBHAR_01258	COG1187	pseudouridine synthase activity
VIBHAR_01259	COG2840	Smr protein MutS2
VIBHAR_01268	COG2608	mercury ion transmembrane transporter activity
VIBHAR_01268	COG2217	Heavy metal translocating P-type atpase
VIBHAR_01270	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VIBHAR_01282	COG0784	Response regulator, receiver
VIBHAR_01282	COG0835	chemotaxis
VIBHAR_01283	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
VIBHAR_01286	COG1815	bacterial-type flagellum-dependent cell motility
VIBHAR_01287	COG1558	bacterial-type flagellum-dependent cell motility
VIBHAR_01288	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
VIBHAR_01289	COG1749	Flagellar hook protein flgE
VIBHAR_01291	COG4787	bacterial-type flagellum-dependent cell motility
VIBHAR_01292	COG4786	Flagellar basal body rod
VIBHAR_01293	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
VIBHAR_01294	COG1706	bacterial-type flagellum-dependent cell motility
VIBHAR_01295	COG3951	Flagellar rod assembly protein muramidase FlgJ
VIBHAR_01295	COG1705	Flagellar rod assembly protein muramidase FlgJ
VIBHAR_01296	COG3344	reverse transcriptase
VIBHAR_01300	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_01301	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_01302	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_01304	COG3335	DDE superfamily endonuclease
VIBHAR_01305	COG3344	reverse transcriptase
VIBHAR_01306	COG2190	(PTS) system
VIBHAR_01307	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VIBHAR_01308	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_01309	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
VIBHAR_01310	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
VIBHAR_01317	COG0330	HflC and HflK could
VIBHAR_01318	COG3118	belongs to the thioredoxin family
VIBHAR_01319	COG0300	oxidoreductase activity
VIBHAR_01320	COG1090	epimerase
VIBHAR_01322	COG0622	Phosphoesterase
VIBHAR_01326	COG3710	Transcriptional regulator
VIBHAR_01329	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
VIBHAR_01330	COG3104	oligopeptide transport
VIBHAR_01332	COG0367	asparagine synthase
VIBHAR_01333	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VIBHAR_01333	COG4651	solute:proton antiporter activity
VIBHAR_01334	COG1940	carbohydrate kinase activity
VIBHAR_01334	COG1846	Transcriptional regulator
VIBHAR_01335	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VIBHAR_01336	COG2190	(PTS) system
VIBHAR_01336	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBHAR_01336	COG1263	PTS System
VIBHAR_01338	COG2165	general secretion pathway protein
VIBHAR_01339	COG0735	belongs to the Fur family
VIBHAR_01343	COG0596	Alpha beta hydrolase
VIBHAR_01345	COG0033	Phosphoglucomutase
VIBHAR_01348	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
VIBHAR_01349	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01351	COG2009	succinate dehydrogenase
VIBHAR_01352	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
VIBHAR_01353	COG1053	succinate dehydrogenase
VIBHAR_01355	COG0567	Dehydrogenase, E1 component
VIBHAR_01356	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBHAR_01359	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VIBHAR_01360	COG1121	(ABC) transporter
VIBHAR_01361	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
VIBHAR_01362	COG4977	sequence-specific DNA binding
VIBHAR_01363	COG1918	ferrous iron import across plasma membrane
VIBHAR_01369	COG3102	Protein conserved in bacteria
VIBHAR_01373	COG0788	formyltetrahydrofolate deformylase activity
VIBHAR_01374	COG1199	ATP-dependent helicase activity
VIBHAR_01375	COG1214	PFAM Peptidase M22, glycoprotease
VIBHAR_01377	COG3065	identical protein binding
VIBHAR_01378	COG2267	carboxylic ester hydrolase activity
VIBHAR_01379	COG0318	PFAM AMP-dependent synthetase and ligase
VIBHAR_01380	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
VIBHAR_01381	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01382	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01383	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
VIBHAR_01384	COG2894	cell division
VIBHAR_01388	COG2951	lytic endotransglycosylase activity
VIBHAR_01390	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VIBHAR_01396	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_01398	COG1169	isochorismate synthase
VIBHAR_01399	COG1021	2,3-dihydroxybenzoate-AMP ligase
VIBHAR_01400	COG1535	isochorismatase
VIBHAR_01400	COG3433	isochorismatase activity
VIBHAR_01401	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBHAR_01401	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBHAR_01403	COG2977	Belongs to the P-Pant transferase superfamily
VIBHAR_01404	COG4771	TonB-dependent receptor
VIBHAR_01406	COG0513	Belongs to the DEAD box helicase family
VIBHAR_01407	COG0569	domain protein
VIBHAR_01408	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VIBHAR_01412	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBHAR_01413	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBHAR_01419	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
VIBHAR_01420	COG0776	regulation of translation
VIBHAR_01421	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VIBHAR_01422	COG1555	photosystem II stabilization
VIBHAR_01426	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
VIBHAR_01427	COG0436	Aminotransferase
VIBHAR_01428	COG1169	isochorismate synthase
VIBHAR_01430	COG0596	Alpha beta hydrolase
VIBHAR_01431	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
VIBHAR_01432	COG1441	menaquinone biosynthetic process
VIBHAR_01436	COG2855	membrane
VIBHAR_01444	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_01445	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBHAR_01449	COG1522	sequence-specific DNA binding
VIBHAR_01450	COG1946	Acyl-CoA thioesterase
VIBHAR_01451	COG3126	Type III secretion system lipoprotein chaperone (YscW)
VIBHAR_01454	COG3706	GGDEF domain
VIBHAR_01461	COG2433	Pfam Transposase IS66
VIBHAR_01467	COG2433	Pfam Transposase IS66
VIBHAR_01475	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01484	COG4372	Transposase
VIBHAR_01487	COG2433	Pfam Transposase IS66
VIBHAR_01488	COG2433	Pfam Transposase IS66
VIBHAR_01509	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VIBHAR_01510	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
VIBHAR_01511	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
VIBHAR_01513	COG0517	IMP dehydrogenase activity
VIBHAR_01513	COG0516	GMP reductase activity
VIBHAR_01515	COG2217	Heavy metal translocating P-type atpase
VIBHAR_01519	COG0537	adenosine 5'-monophosphoramidase activity
VIBHAR_01525	COG1252	NADH dehydrogenase
VIBHAR_01528	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VIBHAR_01530	COG4591	ABC-type transport system involved in lipoprotein release permease component
VIBHAR_01531	COG1136	(ABC) transporter
VIBHAR_01532	COG4591	ABC-type transport system involved in lipoprotein release permease component
VIBHAR_01534	COG0658	competence protein
VIBHAR_01534	COG2333	competence protein COMEC
VIBHAR_01535	COG1132	(ABC) transporter
VIBHAR_01539	COG2719	SpoVR family
VIBHAR_01540	COG2718	Belongs to the UPF0229 family
VIBHAR_01541	COG2766	serine protein kinase
VIBHAR_01544	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VIBHAR_01546	COG1882	Formate acetyltransferase
VIBHAR_01551	COG4215	(ABC) transporter
VIBHAR_01553	COG0708	Exodeoxyribonuclease III
VIBHAR_01555	COG3923	Primosomal replication protein n
VIBHAR_01556	COG0730	response to heat
VIBHAR_01557	COG1199	ATP-dependent helicase activity
VIBHAR_01559	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VIBHAR_01560	COG1187	pseudouridine synthase activity
VIBHAR_01564	COG1278	Cold shock
VIBHAR_01567	COG0542	response to heat
VIBHAR_01568	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
VIBHAR_01574	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VIBHAR_01575	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VIBHAR_01576	COG0297	glycogen (starch) synthase activity
VIBHAR_01580	COG3070	regulator of competence-specific genes
VIBHAR_01583	COG0745	RESPONSE REGULATOR receiver
VIBHAR_01584	COG3385	transposase activity
VIBHAR_01585	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VIBHAR_01586	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VIBHAR_01588	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
VIBHAR_01589	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VIBHAR_01593	COG0189	ligase activity
VIBHAR_01593	COG4067	protein conserved in archaea
VIBHAR_01596	COG1801	Protein of unknown function DUF72
VIBHAR_01599	COG0840	transmembrane signaling receptor activity
VIBHAR_01600	COG0632	four-way junction helicase activity
VIBHAR_01602	COG1271	oxidase subunit
VIBHAR_01603	COG1294	oxidase, subunit
VIBHAR_01604	COG4890	Cyd operon protein YbgT
VIBHAR_01606	COG0824	Thioesterase
VIBHAR_01607	COG0811	peptide transport
VIBHAR_01610	COG0823	Involved in the tonB-independent uptake of proteins
VIBHAR_01611	COG2885	chlorophyll binding
VIBHAR_01613	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
VIBHAR_01616	COG3766	membrane
VIBHAR_01618	COG0754	glutathionylspermidine amidase activity
VIBHAR_01620	COG2205	protein histidine kinase activity
VIBHAR_01620	COG0784	Response regulator, receiver
VIBHAR_01623	COG0582	viral genome integration into host DNA
VIBHAR_01626	COG2433	Pfam Transposase IS66
VIBHAR_01632	COG0280	phosphate acetyltransferase
VIBHAR_01633	COG3426	butyrate kinase activity
VIBHAR_01634	COG4689	acetoacetate decarboxylase
VIBHAR_01635	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIBHAR_01645	COG3335	DDE superfamily endonuclease
VIBHAR_01646	COG2433	Pfam Transposase IS66
VIBHAR_01658	COG2433	Pfam Transposase IS66
VIBHAR_01662	COG3335	DDE superfamily endonuclease
VIBHAR_01670	COG5433	transposase activity
VIBHAR_01686	COG3385	transposase activity
VIBHAR_01707	COG4669	(LipO)protein
VIBHAR_01713	COG3177	Filamentation induced by cAMP protein fic
VIBHAR_01714	COG3335	DDE superfamily endonuclease
VIBHAR_01716	COG3335	DDE superfamily endonuclease
VIBHAR_01719	COG3335	DDE superfamily endonuclease
VIBHAR_01722	COG0583	DNA-binding transcription factor activity
VIBHAR_01723	COG4792	protein secretion
VIBHAR_01724	COG4791	protein targeting
VIBHAR_01725	COG4794	Type iii secretion
VIBHAR_01726	COG4790	Type iii secretion
VIBHAR_01727	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VIBHAR_01740	COG0457	Tetratricopeptide repeat
VIBHAR_01746	COG3385	transposase activity
VIBHAR_01751	COG2824	Alkylphosphonate utilization operon protein PhnA
VIBHAR_01755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_01756	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBHAR_01758	COG2186	Transcriptional regulator
VIBHAR_01760	COG1288	antiporter activity
VIBHAR_01764	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_01765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_01766	COG1120	ATPase activity
VIBHAR_01770	COG3293	Transposase
VIBHAR_01772	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VIBHAR_01775	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01777	COG3568	Endonuclease Exonuclease Phosphatase
VIBHAR_01783	COG2433	Pfam Transposase IS66
VIBHAR_01787	COG0402	S-adenosylhomocysteine deaminase activity
VIBHAR_01790	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_01793	COG0583	DNA-binding transcription factor activity
VIBHAR_01795	COG0686	Belongs to the AlaDH PNT family
VIBHAR_01797	COG1674	ftsk spoiiie
VIBHAR_01799	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VIBHAR_01801	COG3335	DDE superfamily endonuclease
VIBHAR_01805	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
VIBHAR_01809	COG2226	methyltransferase
VIBHAR_01811	COG3344	reverse transcriptase
VIBHAR_01815	COG0300	oxidoreductase activity
VIBHAR_01818	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VIBHAR_01822	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
VIBHAR_01826	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBHAR_01828	COG1757	Na H antiporter
VIBHAR_01831	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VIBHAR_01833	COG0131	Imidazoleglycerol-phosphate dehydratase
VIBHAR_01833	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VIBHAR_01834	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
VIBHAR_01837	COG0140	phosphoribosyl-ATP diphosphatase activity
VIBHAR_01837	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VIBHAR_01838	COG3012	SEC-C Motif Domain Protein
VIBHAR_01840	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIBHAR_01841	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VIBHAR_01842	COG0215	cysteine-tRNA ligase activity
VIBHAR_01843	COG1435	thymidine kinase activity
VIBHAR_01846	COG3344	reverse transcriptase
VIBHAR_01847	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VIBHAR_01852	COG2116	formate transmembrane transporter activity
VIBHAR_01854	COG0390	transport system, permease component
VIBHAR_01855	COG4459	periplasmic nitrate reductase
VIBHAR_01857	COG0243	molybdopterin cofactor binding
VIBHAR_01860	COG1227	inorganic diphosphatase activity
VIBHAR_01866	COG4172	Belongs to the ABC transporter superfamily
VIBHAR_01868	COG4171	peptide transport system, permease
VIBHAR_01869	COG4168	peptide transport system, permease
VIBHAR_01871	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
VIBHAR_01872	COG1842	Phage shock protein A
VIBHAR_01874	COG1983	PspC domain protein
VIBHAR_01878	COG2818	Glycosylase
VIBHAR_01880	COG3335	DDE superfamily endonuclease
VIBHAR_01882	COG1846	Transcriptional regulator
VIBHAR_01883	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBHAR_01890	COG1448	Aminotransferase
VIBHAR_01891	COG3437	response regulator, receiver
VIBHAR_01891	COG2770	Histidine kinase
VIBHAR_01894	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBHAR_01897	COG0017	Asparaginyl-tRNA synthetase
VIBHAR_01900	COG0720	synthase
VIBHAR_01901	COG2197	response regulator
VIBHAR_01905	COG3385	transposase activity
VIBHAR_01908	COG1760	l-serine dehydratase
VIBHAR_01909	COG0814	amino acid
VIBHAR_01913	COG0784	Response regulator, receiver
VIBHAR_01913	COG2205	protein histidine kinase activity
VIBHAR_01914	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VIBHAR_01917	COG3106	COG3106 Predicted ATPase
VIBHAR_01920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VIBHAR_01930	COG2433	Pfam Transposase IS66
VIBHAR_01935	COG4584	PFAM Integrase catalytic
VIBHAR_01936	COG1484	DNA-dependent DNA replication
VIBHAR_01937	COG2433	Pfam Transposase IS66
VIBHAR_01941	COG2433	Pfam Transposase IS66
VIBHAR_01948	COG0582	viral genome integration into host DNA
VIBHAR_01951	COG5532	Uncharacterized conserved protein (DUF2303)
VIBHAR_01955	COG3620	sequence-specific DNA binding
VIBHAR_01960	COG1802	Transcriptional regulator
VIBHAR_01960	COG4626	Terminase
VIBHAR_01963	COG1403	HNH endonuclease
VIBHAR_01965	COG3501	Rhs element vgr protein
VIBHAR_01975	COG3772	lysozyme
VIBHAR_01981	COG1030	water channel activity
VIBHAR_02012	COG3344	reverse transcriptase
VIBHAR_02018	COG2433	Pfam Transposase IS66
VIBHAR_02022	COG3335	DDE superfamily endonuclease
VIBHAR_02025	COG2433	Pfam Transposase IS66
VIBHAR_02026	COG3335	DDE superfamily endonuclease
VIBHAR_02028	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VIBHAR_02031	COG3706	GGDEF domain
VIBHAR_02031	COG0745	RESPONSE REGULATOR receiver
VIBHAR_02032	COG0471	metal ion transport
VIBHAR_02033	COG2949	membrane
VIBHAR_02035	COG1643	Atp-dependent helicase
VIBHAR_02051	COG2433	Pfam Transposase IS66
VIBHAR_02063	COG0247	lactate metabolic process
VIBHAR_02063	COG0277	FAD linked oxidase domain protein
VIBHAR_02072	COG2986	histidine ammonia-lyase
VIBHAR_02074	COG0010	Belongs to the arginase family
VIBHAR_02083	COG2433	Pfam Transposase IS66
VIBHAR_02087	COG0251	oxidation-reduction process
VIBHAR_02093	COG0072	phenylalanine-tRNA ligase activity
VIBHAR_02093	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIBHAR_02094	COG2433	Pfam Transposase IS66
VIBHAR_02097	COG1535	isochorismatase
VIBHAR_02097	COG3433	isochorismatase activity
VIBHAR_02101	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBHAR_02103	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
VIBHAR_02104	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VIBHAR_02105	COG4774	siderophore transport
VIBHAR_02106	COG4607	ABC-type enterochelin transport system periplasmic component
VIBHAR_02107	COG4605	iron ion homeostasis
VIBHAR_02108	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_02117	COG1346	cytolysis
VIBHAR_02119	COG2925	Exonuclease
VIBHAR_02123	COG0702	epimerase
VIBHAR_02124	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
VIBHAR_02127	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
VIBHAR_02129	COG2062	phosphohistidine phosphatase, SixA
VIBHAR_02132	COG4139	cobalamin transport
VIBHAR_02134	COG3335	DDE superfamily endonuclease
VIBHAR_02139	COG0583	DNA-binding transcription factor activity
VIBHAR_02142	COG2433	Pfam Transposase IS66
VIBHAR_02144	COG1451	nucleotide metabolic process
VIBHAR_02146	COG3335	DDE superfamily endonuclease
VIBHAR_02155	COG3335	DDE superfamily endonuclease
VIBHAR_02171	COG3335	DDE superfamily endonuclease
VIBHAR_02174	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIBHAR_02175	COG3335	DDE superfamily endonuclease
VIBHAR_02178	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
VIBHAR_02180	COG0625	glutathione transferase activity
VIBHAR_02184	COG0657	acetylesterase activity
VIBHAR_02189	COG0668	transmembrane transport
VIBHAR_02193	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
VIBHAR_02197	COG0668	transmembrane transport
VIBHAR_02198	COG3247	response to pH
VIBHAR_02201	COG1846	Transcriptional regulator
VIBHAR_02207	COG0110	maltose O-acetyltransferase activity
VIBHAR_02212	COG3850	Histidine kinase
VIBHAR_02212	COG4999	Histidine kinase
VIBHAR_02212	COG2205	protein histidine kinase activity
VIBHAR_02212	COG3437	response regulator, receiver
VIBHAR_02213	COG5001	Diguanylate cyclase
VIBHAR_02213	COG3300	MHYT domain
VIBHAR_02218	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIBHAR_02219	COG1215	transferase activity, transferring glycosyl groups
VIBHAR_02220	COG0438	transferase activity, transferring glycosyl groups
VIBHAR_02226	COG0438	transferase activity, transferring glycosyl groups
VIBHAR_02227	COG0438	transferase activity, transferring glycosyl groups
VIBHAR_02228	COG2204	response regulator
VIBHAR_02232	COG2885	chlorophyll binding
VIBHAR_02236	COG0534	Mate efflux family protein
VIBHAR_02237	COG0307	riboflavin synthase, alpha
VIBHAR_02240	COG2201	protein-glutamate methylesterase activity
VIBHAR_02241	COG3706	GGDEF domain
VIBHAR_02243	COG0791	NLP P60 protein
VIBHAR_02244	COG0840	transmembrane signaling receptor activity
VIBHAR_02249	COG3344	reverse transcriptase
VIBHAR_02257	COG1940	carbohydrate kinase activity
VIBHAR_02260	COG0303	'Molybdopterin
VIBHAR_02262	COG3842	ATPase activity
VIBHAR_02263	COG4662	Binding-protein-dependent transport system inner membrane component
VIBHAR_02265	COG2204	response regulator
VIBHAR_02266	COG4191	Histidine kinase
VIBHAR_02269	COG0488	(ABC) transporter
VIBHAR_02271	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VIBHAR_02275	COG3381	protein complex oligomerization
VIBHAR_02278	COG0243	molybdopterin cofactor binding
VIBHAR_02278	COG3383	formate dehydrogenase (NAD+) activity
VIBHAR_02279	COG0437	4 iron, 4 sulfur cluster binding
VIBHAR_02284	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
VIBHAR_02285	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VIBHAR_02286	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VIBHAR_02287	COG1177	transmembrane transport
VIBHAR_02288	COG1176	ABC-type spermidine putrescine transport system, permease component I
VIBHAR_02289	COG3842	ATPase activity
VIBHAR_02294	COG0589	response to stress
VIBHAR_02295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBHAR_02298	COG2217	Heavy metal translocating P-type atpase
VIBHAR_02300	COG2010	Cytochrome c
VIBHAR_02303	COG3278	Belongs to the heme-copper respiratory oxidase family
VIBHAR_02306	COG2205	protein histidine kinase activity
VIBHAR_02306	COG0784	Response regulator, receiver
VIBHAR_02331	COG1067	ATP-dependent peptidase activity
VIBHAR_02342	COG2902	Dehydrogenase
VIBHAR_02344	COG0308	aminopeptidase N
VIBHAR_02347	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
VIBHAR_02348	COG1956	GAF domain-containing protein
VIBHAR_02349	COG1132	(ABC) transporter
VIBHAR_02350	COG2995	paraquat-inducible protein a
VIBHAR_02351	COG3008	intermembrane lipid transfer
VIBHAR_02357	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VIBHAR_02361	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBHAR_02362	COG4597	amino acid ABC transporter
VIBHAR_02363	COG0765	amino acid transport
VIBHAR_02364	COG1126	abc transporter atp-binding protein
VIBHAR_02365	COG0670	Belongs to the BI1 family
VIBHAR_02366	COG2920	part of a sulfur-relay system
VIBHAR_02367	COG1254	Belongs to the acylphosphatase family
VIBHAR_02377	COG2433	Pfam Transposase IS66
VIBHAR_02383	COG3706	GGDEF domain
VIBHAR_02385	COG0602	queuosine metabolic process
VIBHAR_02386	COG0561	phosphatase activity
VIBHAR_02394	COG2828	Protein conserved in bacteria
VIBHAR_02396	COG0372	Belongs to the citrate synthase family
VIBHAR_02397	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
VIBHAR_02399	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VIBHAR_02400	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VIBHAR_02401	COG2433	Pfam Transposase IS66
VIBHAR_02406	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VIBHAR_02410	COG2433	Pfam Transposase IS66
VIBHAR_02417	COG0730	response to heat
VIBHAR_02418	COG0840	transmembrane signaling receptor activity
VIBHAR_02420	COG1012	belongs to the aldehyde dehydrogenase family
VIBHAR_02421	COG3284	Transcriptional regulator
VIBHAR_02426	COG3344	reverse transcriptase
VIBHAR_02427	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
VIBHAR_02428	COG0363	glucosamine-6-phosphate deaminase activity
VIBHAR_02429	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VIBHAR_02430	COG4565	transcriptional regulatory protein
VIBHAR_02431	COG3290	protein histidine kinase activity
VIBHAR_02435	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_02442	COG2433	Pfam Transposase IS66
VIBHAR_02449	COG1404	Belongs to the peptidase S8 family
VIBHAR_02450	COG1858	cytochrome C peroxidase
VIBHAR_02451	COG0527	aspartate kinase activity
VIBHAR_02453	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VIBHAR_02454	COG0456	acetyltransferase
VIBHAR_02455	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBHAR_02457	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
VIBHAR_02459	COG0215	cysteine-tRNA ligase activity
VIBHAR_02463	COG3335	DDE superfamily endonuclease
VIBHAR_02464	COG1368	sulfuric ester hydrolase activity
VIBHAR_02469	COG1115	amino acid carrier protein
VIBHAR_02476	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_02477	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
VIBHAR_02482	COG1560	Kdo2-lipid A biosynthetic process
VIBHAR_02483	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_02485	COG0531	amino acid
VIBHAR_02490	COG3344	reverse transcriptase
VIBHAR_02492	COG3385	transposase activity
VIBHAR_02493	COG3063	Type IV pilus biogenesis stability protein PilW
VIBHAR_02496	COG3293	Transposase
VIBHAR_02501	COG1643	Atp-dependent helicase
VIBHAR_02502	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
VIBHAR_02505	COG3302	dmso reductase anchor subunit
VIBHAR_02506	COG0437	4 iron, 4 sulfur cluster binding
VIBHAR_02507	COG0243	molybdopterin cofactor binding
VIBHAR_02509	COG3227	Zinc metalloprotease (Elastase)
VIBHAR_02517	COG3706	GGDEF domain
VIBHAR_02519	COG0443	Heat shock 70 kDa protein
VIBHAR_02520	COG0443	Heat shock 70 kDa protein
VIBHAR_02524	COG1132	(ABC) transporter
VIBHAR_02525	COG1132	(ABC) transporter
VIBHAR_02530	COG0814	amino acid
VIBHAR_02531	COG1454	alcohol dehydrogenase
VIBHAR_02532	COG4221	oxidoreductase activity
VIBHAR_02536	COG0861	Integral membrane protein TerC family
VIBHAR_02539	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VIBHAR_02540	COG1328	CTP reductase activity
VIBHAR_02548	COG3335	DDE superfamily endonuclease
VIBHAR_02551	COG0596	Alpha beta hydrolase
VIBHAR_02556	COG1609	Transcriptional regulator
VIBHAR_02558	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBHAR_02564	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VIBHAR_02565	COG3385	transposase activity
VIBHAR_02569	COG3340	Belongs to the peptidase S51 family
VIBHAR_02574	COG2433	Pfam Transposase IS66
VIBHAR_02583	COG3344	reverse transcriptase
VIBHAR_02591	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02598	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02599	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02603	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02605	COG3335	DDE superfamily endonuclease
VIBHAR_02606	COG0492	ferredoxin-NADP+ reductase activity
VIBHAR_02607	COG4988	ABC transporter
VIBHAR_02608	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
VIBHAR_02610	COG0583	DNA-binding transcription factor activity
VIBHAR_02611	COG0583	DNA-binding transcription factor activity
VIBHAR_02613	COG3293	Transposase
VIBHAR_02614	COG2200	EAL domain
VIBHAR_02616	COG3293	Transposase
VIBHAR_02620	COG5001	Diguanylate cyclase
VIBHAR_02623	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VIBHAR_02625	COG4191	Histidine kinase
VIBHAR_02625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBHAR_02628	COG3070	regulator of competence-specific genes
VIBHAR_02630	COG2431	L-lysine efflux transmembrane transporter activity
VIBHAR_02632	COG0076	glutamate decarboxylase activity
VIBHAR_02633	COG1737	Transcriptional regulator
VIBHAR_02635	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VIBHAR_02637	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VIBHAR_02638	COG1960	acyl-CoA dehydrogenase activity
VIBHAR_02644	COG2433	Pfam Transposase IS66
VIBHAR_02649	COG4181	ATPase activity
VIBHAR_02650	COG0534	Mate efflux family protein
VIBHAR_02651	COG0702	epimerase
VIBHAR_02652	COG3344	reverse transcriptase
VIBHAR_02654	COG2814	Major facilitator Superfamily
VIBHAR_02655	COG1187	pseudouridine synthase activity
VIBHAR_02656	COG1061	Type III restriction enzyme res subunit
VIBHAR_02658	COG0745	RESPONSE REGULATOR receiver
VIBHAR_02659	COG2205	protein histidine kinase activity
VIBHAR_02667	COG3313	Fe-S protein
VIBHAR_02670	COG0659	secondary active sulfate transmembrane transporter activity
VIBHAR_02677	COG0398	Pfam SNARE associated Golgi protein
VIBHAR_02678	COG4134	Bacterial extracellular solute-binding protein
VIBHAR_02679	COG4135	transport system, permease component
VIBHAR_02680	COG4136	ATPase activity
VIBHAR_02681	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
VIBHAR_02683	COG2814	Major facilitator Superfamily
VIBHAR_02686	COG3604	Transcriptional regulator
VIBHAR_02687	COG1151	hydroxylamine reductase activity
VIBHAR_02688	COG3335	DDE superfamily endonuclease
VIBHAR_02690	COG0564	pseudouridine synthase activity
VIBHAR_02692	COG0733	neurotransmitter:sodium symporter activity
VIBHAR_02695	COG0626	cystathionine gamma-synthase activity
VIBHAR_02696	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
VIBHAR_02698	COG3335	DDE superfamily endonuclease
VIBHAR_02701	COG3335	DDE superfamily endonuclease
VIBHAR_02705	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VIBHAR_02708	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VIBHAR_02709	COG3108	Peptidase M15
VIBHAR_02710	COG2989	Protein conserved in bacteria
VIBHAR_02720	COG3088	subunit of a heme lyase
VIBHAR_02720	COG4235	cytochrome complex assembly
VIBHAR_02722	COG1138	Cytochrome C-type biogenesis protein
VIBHAR_02723	COG3301	Polysulphide reductase, NrfD
VIBHAR_02724	COG0437	4 iron, 4 sulfur cluster binding
VIBHAR_02725	COG0437	4 iron, 4 sulfur cluster binding
VIBHAR_02727	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
VIBHAR_02733	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VIBHAR_02734	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VIBHAR_02736	COG1546	Belongs to the CinA family
VIBHAR_02736	COG1058	Belongs to the CinA family
VIBHAR_02739	COG0019	diaminopimelate decarboxylase activity
VIBHAR_02747	COG0322	excinuclease ABC activity
VIBHAR_02748	COG2197	response regulator
VIBHAR_02749	COG0417	DNA replication proofreading
VIBHAR_02753	COG1187	pseudouridine synthase activity
VIBHAR_02755	COG0009	L-threonylcarbamoyladenylate synthase
VIBHAR_02756	COG0613	PHP domain protein
VIBHAR_02758	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VIBHAR_02759	COG0512	Glutamine amidotransferase of anthranilate synthase
VIBHAR_02761	COG0134	indole-3-glycerol-phosphate synthase activity
VIBHAR_02761	COG0135	phosphoribosylanthranilate isomerase activity
VIBHAR_02763	COG0159	tryptophan synthase activity
VIBHAR_02764	COG1301	dicarboxylic acid transport
VIBHAR_02769	COG1607	acyl-coa hydrolase
VIBHAR_02770	COG2350	Protein conserved in bacteria
VIBHAR_02773	COG0583	DNA-binding transcription factor activity
VIBHAR_02776	COG5001	Diguanylate cyclase
VIBHAR_02776	COG1716	ATPase activity
VIBHAR_02777	COG1032	radical SAM domain protein
VIBHAR_02782	COG0446	pyridine nucleotide-disulphide oxidoreductase
VIBHAR_02784	COG0251	oxidation-reduction process
VIBHAR_02785	COG2964	Protein conserved in bacteria
VIBHAR_02787	COG2175	clavaminate synthase activity
VIBHAR_02788	COG0840	transmembrane signaling receptor activity
VIBHAR_02790	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VIBHAR_02791	COG0463	Glycosyl transferase, family 2
VIBHAR_02792	COG0745	RESPONSE REGULATOR receiver
VIBHAR_02793	COG3850	Histidine kinase
VIBHAR_02793	COG5002	protein histidine kinase activity
VIBHAR_02799	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02800	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VIBHAR_02812	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02830	COG2176	DNA-directed DNA polymerase activity
VIBHAR_02834	COG1136	(ABC) transporter
VIBHAR_02834	COG0577	efflux transmembrane transporter activity
VIBHAR_02838	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_02844	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VIBHAR_02847	COG4232	protein-disulfide reductase activity
VIBHAR_02850	COG2995	paraquat-inducible protein a
VIBHAR_02851	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VIBHAR_02851	COG3008	intermembrane lipid transfer
VIBHAR_02852	COG3009	Protein conserved in bacteria
VIBHAR_02855	COG4166	transmembrane transport
VIBHAR_02857	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
VIBHAR_02858	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
VIBHAR_02860	COG0539	negative regulation of cytoplasmic translation
VIBHAR_02863	COG0616	signal peptide processing
VIBHAR_02865	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_02869	COG0835	chemotaxis
VIBHAR_02869	COG0784	Response regulator, receiver
VIBHAR_02870	COG1940	carbohydrate kinase activity
VIBHAR_02873	COG2433	Pfam Transposase IS66
VIBHAR_02879	COG2272	Belongs to the type-B carboxylesterase lipase family
VIBHAR_02889	COG2433	Pfam Transposase IS66
VIBHAR_02892	COG4667	esterase of the alpha-beta hydrolase superfamily
VIBHAR_02896	COG0733	neurotransmitter:sodium symporter activity
VIBHAR_02898	COG3385	transposase activity
VIBHAR_02900	COG1263	PTS System
VIBHAR_02900	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBHAR_02901	COG0084	hydrolase, TatD family'
VIBHAR_02904	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VIBHAR_02910	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VIBHAR_02913	COG1399	metal-binding, possibly nucleic acid-binding protein
VIBHAR_02914	COG0424	maF-like protein
VIBHAR_02915	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_02917	COG0564	pseudouridine synthase activity
VIBHAR_02918	COG1530	ribonuclease E activity
VIBHAR_02920	COG0659	secondary active sulfate transmembrane transporter activity
VIBHAR_02921	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VIBHAR_02922	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
VIBHAR_02929	COG2186	Transcriptional regulator
VIBHAR_02931	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
VIBHAR_02932	COG0653	protein targeting
VIBHAR_02933	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VIBHAR_02934	COG0745	RESPONSE REGULATOR receiver
VIBHAR_02934	COG3706	GGDEF domain
VIBHAR_02937	COG0366	Alpha amylase catalytic
VIBHAR_02938	COG1122	ATPase activity
VIBHAR_02939	COG4120	Belongs to the binding-protein-dependent transport system permease family
VIBHAR_02943	COG0857	belongs to the CobB CobQ family
VIBHAR_02943	COG0280	phosphate acetyltransferase
VIBHAR_02944	COG0435	Glutathione S-transferase
VIBHAR_02946	COG0444	Belongs to the ABC transporter superfamily
VIBHAR_02947	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBHAR_02948	COG0601	transmembrane transport
VIBHAR_02950	COG0314	molybdopterin synthase activity
VIBHAR_02951	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
VIBHAR_02953	COG0521	Mo-molybdopterin cofactor biosynthetic process
VIBHAR_02954	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
VIBHAR_02955	COG0391	Required for morphogenesis under gluconeogenic growth conditions
VIBHAR_02956	COG2433	Pfam Transposase IS66
VIBHAR_02961	COG0556	nucleotide-excision repair
VIBHAR_02963	COG1882	Formate acetyltransferase
VIBHAR_02966	COG4656	Part of a membrane complex involved in electron transport
VIBHAR_02967	COG4658	electron transport chain
VIBHAR_02968	COG4659	FMN binding
VIBHAR_02969	COG4660	Part of a membrane complex involved in electron transport
VIBHAR_02970	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VIBHAR_02974	COG3385	transposase activity
VIBHAR_02975	COG3344	reverse transcriptase
VIBHAR_02979	COG2433	Pfam Transposase IS66
VIBHAR_02986	COG0840	transmembrane signaling receptor activity
VIBHAR_02987	COG3344	reverse transcriptase
VIBHAR_02988	COG0346	lactoylglutathione lyase activity
VIBHAR_02990	COG2885	chlorophyll binding
VIBHAR_02993	COG2056	Na+-H+ antiporter family
VIBHAR_03001	COG3451	type IV secretory pathway VirB4
VIBHAR_03003	COG2433	Pfam Transposase IS66
VIBHAR_03006	COG0745	RESPONSE REGULATOR receiver
VIBHAR_03006	COG3706	GGDEF domain
VIBHAR_03010	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VIBHAR_03013	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VIBHAR_03016	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_03017	COG3344	reverse transcriptase
VIBHAR_03018	COG1454	alcohol dehydrogenase
VIBHAR_03018	COG1012	belongs to the aldehyde dehydrogenase family
VIBHAR_03019	COG2095	MarC family integral membrane protein
VIBHAR_03020	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBHAR_03021	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VIBHAR_03022	COG1757	Na H antiporter
VIBHAR_03025	COG3385	transposase activity
VIBHAR_03028	COG3083	sulfuric ester hydrolase activity
VIBHAR_03030	COG3344	reverse transcriptase
VIBHAR_03031	COG3385	transposase activity
VIBHAR_03033	COG4269	membrane
VIBHAR_03035	COG0123	including yeast histone deacetylase and acetoin utilization protein
VIBHAR_03041	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VIBHAR_03042	COG0778	Nitroreductase
VIBHAR_03043	COG1902	pentaerythritol trinitrate reductase activity
VIBHAR_03043	COG0446	pyridine nucleotide-disulphide oxidoreductase
VIBHAR_03044	COG0616	signal peptide processing
VIBHAR_03045	COG0252	asparaginase activity
VIBHAR_03046	COG3139	Protein of unknown function (DUF1315)
VIBHAR_03048	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBHAR_03049	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VIBHAR_03053	COG2226	methyltransferase
VIBHAR_03057	COG1785	Belongs to the alkaline phosphatase family
VIBHAR_03060	COG0346	lactoylglutathione lyase activity
VIBHAR_03062	COG0668	transmembrane transport
VIBHAR_03063	COG0076	glutamate decarboxylase activity
VIBHAR_03065	COG2985	domain, Protein
VIBHAR_03066	COG2261	transglycosylase associated protein
VIBHAR_03080	COG2964	Protein conserved in bacteria
VIBHAR_03082	COG0251	oxidation-reduction process
VIBHAR_03084	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VIBHAR_03087	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
VIBHAR_03089	COG2832	Protein of unknown function (DUF454)
VIBHAR_03091	COG0745	RESPONSE REGULATOR receiver
VIBHAR_03092	COG0583	DNA-binding transcription factor activity
VIBHAR_03093	COG3385	transposase activity
VIBHAR_03095	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
VIBHAR_03096	COG1286	toxin biosynthetic process
VIBHAR_03097	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
VIBHAR_03098	COG0285	dihydrofolate synthase activity
VIBHAR_03103	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VIBHAR_03104	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIBHAR_03105	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VIBHAR_03111	COG3101	peptidyl-lysine hydroxylation
VIBHAR_03112	COG2860	membrane
VIBHAR_03115	COG2890	protein-(glutamine-N5) methyltransferase activity
VIBHAR_03117	COG2062	phosphohistidine phosphatase, SixA
VIBHAR_03119	COG3344	reverse transcriptase
VIBHAR_03121	COG0183	Belongs to the thiolase family
VIBHAR_03124	COG2067	long-chain fatty acid transport protein
VIBHAR_03125	COG2067	long-chain fatty acid transport protein
VIBHAR_03126	COG2853	Lipoprotein
VIBHAR_03127	COG4235	cytochrome complex assembly
VIBHAR_03127	COG3088	subunit of a heme lyase
VIBHAR_03129	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VIBHAR_03130	COG1138	Cytochrome C-type biogenesis protein
VIBHAR_03133	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VIBHAR_03134	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VIBHAR_03135	COG4133	protoheme IX ABC transporter activity
VIBHAR_03137	COG0835	chemotaxis
VIBHAR_03139	COG1192	Involved in chromosome partitioning
VIBHAR_03140	COG2201	protein-glutamate methylesterase activity
VIBHAR_03141	COG0643	Histidine kinase
VIBHAR_03141	COG2198	Histidine kinase
VIBHAR_03142	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
VIBHAR_03145	COG0455	bacterial-type flagellum organization
VIBHAR_03149	COG1684	flagellar biosynthetic protein fliR
VIBHAR_03150	COG1987	bacterial-type flagellum assembly
VIBHAR_03161	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VIBHAR_03163	COG1677	Flagellar hook-basal body complex protein FliE
VIBHAR_03164	COG2204	response regulator
VIBHAR_03165	COG4191	Histidine kinase
VIBHAR_03166	COG2204	response regulator
VIBHAR_03167	COG1516	flagellar protein fliS
VIBHAR_03169	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
VIBHAR_03170	COG1334	flagellar protein FlaG
VIBHAR_03171	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_03173	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_03174	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_03177	COG2837	iron assimilation
VIBHAR_03182	COG1393	Belongs to the ArsC family
VIBHAR_03187	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VIBHAR_03188	COG2716	regulation of RNA biosynthetic process
VIBHAR_03189	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VIBHAR_03193	COG4783	chaperone-mediated protein folding
VIBHAR_03194	COG1393	Belongs to the ArsC family
VIBHAR_03198	COG2233	PERMEase
VIBHAR_03199	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
VIBHAR_03201	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
VIBHAR_03202	COG0121	glutamine amidotransferase
VIBHAR_03203	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VIBHAR_03204	COG1960	acyl-CoA dehydrogenase activity
VIBHAR_03210	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VIBHAR_03212	COG2226	methyltransferase
VIBHAR_03214	COG0741	lytic transglycosylase activity
VIBHAR_03214	COG1388	LysM domain
VIBHAR_03218	COG0347	Belongs to the P(II) protein family
VIBHAR_03222	COG0587	DNA-directed DNA polymerase activity
VIBHAR_03227	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VIBHAR_03228	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
VIBHAR_03230	COG0750	zinc metalloprotease
VIBHAR_03232	COG0575	Belongs to the CDS family
VIBHAR_03233	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VIBHAR_03238	COG0024	Methionine aminopeptidase
VIBHAR_03241	COG0564	pseudouridine synthase activity
VIBHAR_03243	COG3098	single-species biofilm formation
VIBHAR_03248	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VIBHAR_03251	COG1720	tRNA m6t6A37 methyltransferase activity
VIBHAR_03257	COG0733	neurotransmitter:sodium symporter activity
VIBHAR_03259	COG3385	transposase activity
VIBHAR_03261	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VIBHAR_03262	COG0514	ATP-dependent DNA helicase (RecQ)
VIBHAR_03264	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VIBHAR_03265	COG0745	RESPONSE REGULATOR receiver
VIBHAR_03265	COG3706	GGDEF domain
VIBHAR_03266	COG3344	reverse transcriptase
VIBHAR_03269	COG1477	protein flavinylation
VIBHAR_03276	COG0271	Belongs to the BolA IbaG family
VIBHAR_03284	COG1595	DNA-templated transcription, initiation
VIBHAR_03288	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VIBHAR_03289	COG0693	protein deglycase activity
VIBHAR_03290	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VIBHAR_03291	COG2166	iron-sulfur cluster assembly
VIBHAR_03292	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VIBHAR_03293	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
VIBHAR_03295	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VIBHAR_03295	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VIBHAR_03297	COG3385	transposase activity
VIBHAR_03300	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VIBHAR_03301	COG1074	ATP-dependent DNA helicase activity
VIBHAR_03302	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
VIBHAR_03306	COG3141	response to X-ray
VIBHAR_03309	COG2171	N-acyltransferase activity
VIBHAR_03310	COG0584	glycerophosphoryl diester phosphodiesterase
VIBHAR_03311	COG2271	Major facilitator Superfamily
VIBHAR_03312	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VIBHAR_03314	COG1349	DNA-binding transcription factor activity
VIBHAR_03315	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
VIBHAR_03319	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIBHAR_03321	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VIBHAR_03324	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBHAR_03324	COG1263	PTS System
VIBHAR_03325	COG1609	Transcriptional regulator
VIBHAR_03326	COG2017	converts alpha-aldose to the beta-anomer
VIBHAR_03329	COG1085	galactose-1-phosphate uridylyltransferase
VIBHAR_03330	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_03331	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VIBHAR_03333	COG0768	penicillin binding
VIBHAR_03334	COG1609	Transcriptional regulator
VIBHAR_03337	COG3250	beta-galactosidase activity
VIBHAR_03338	COG2731	YhcH YjgK YiaL family protein
VIBHAR_03339	COG0531	amino acid
VIBHAR_03340	COG0583	DNA-binding transcription factor activity
VIBHAR_03353	COG4964	Belongs to the GSP D family
VIBHAR_03357	COG2433	Pfam Transposase IS66
VIBHAR_03361	COG0583	DNA-binding transcription factor activity
VIBHAR_03362	COG0741	lytic transglycosylase activity
VIBHAR_03363	COG1022	Amp-dependent synthetase and ligase
VIBHAR_03369	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VIBHAR_03370	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
VIBHAR_03372	COG0560	Phosphoserine phosphatase
VIBHAR_03374	COG0813	purine-nucleoside phosphorylase activity
VIBHAR_03376	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
VIBHAR_03378	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VIBHAR_03379	COG0084	hydrolase, TatD family'
VIBHAR_03385	COG3153	acetyltransferase
VIBHAR_03390	COG0534	Mate efflux family protein
VIBHAR_03397	COG0195	Participates in both transcription termination and antitermination
VIBHAR_03401	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VIBHAR_03403	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VIBHAR_03404	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VIBHAR_03406	COG1534	Rna-binding protein
VIBHAR_03407	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VIBHAR_03408	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VIBHAR_03409	COG2027	D-alanyl-D-alanine carboxypeptidase
VIBHAR_03412	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VIBHAR_03413	COG0739	heme binding
VIBHAR_03420	COG0628	permease
VIBHAR_03422	COG0784	Response regulator, receiver
VIBHAR_03422	COG2205	protein histidine kinase activity
VIBHAR_03422	COG2198	Histidine kinase
VIBHAR_03422	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBHAR_03423	COG0747	negative chemotaxis
VIBHAR_03425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VIBHAR_03426	COG0444	Belongs to the ABC transporter superfamily
VIBHAR_03427	COG4608	Belongs to the ABC transporter superfamily
VIBHAR_03429	COG2971	BadF BadG BcrA BcrD
VIBHAR_03432	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VIBHAR_03433	COG3842	ATPase activity
VIBHAR_03435	COG1840	ABC-type Fe3 transport system, periplasmic component
VIBHAR_03436	COG0004	ammonium transporteR
VIBHAR_03439	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_03440	COG1049	propionate catabolic process, 2-methylcitrate cycle
VIBHAR_03442	COG1752	Esterase of the alpha-beta hydrolase superfamily
VIBHAR_03443	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VIBHAR_03444	COG1643	Atp-dependent helicase
VIBHAR_03446	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
VIBHAR_03447	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VIBHAR_03449	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VIBHAR_03452	COG1560	Kdo2-lipid A biosynthetic process
VIBHAR_03454	COG0842	Transport permease protein
VIBHAR_03455	COG1131	(ABC) transporter
VIBHAR_03456	COG0659	secondary active sulfate transmembrane transporter activity
VIBHAR_03457	COG0288	reversible hydration of carbon dioxide
VIBHAR_03462	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VIBHAR_03463	COG0508	dehydrogenase complex catalyzes the overall conversion of
VIBHAR_03464	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
VIBHAR_03465	COG2186	Transcriptional regulator
VIBHAR_03469	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VIBHAR_03470	COG1459	type II secretion system
VIBHAR_03472	COG0237	dephospho-CoA kinase activity
VIBHAR_03473	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
VIBHAR_03474	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
VIBHAR_03475	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_03476	COG3344	reverse transcriptase
VIBHAR_03481	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VIBHAR_03482	COG4137	Cytochrome C assembly protein
VIBHAR_03483	COG4536	flavin adenine dinucleotide binding
VIBHAR_03487	COG0612	Peptidase, M16
VIBHAR_03488	COG1238	metal cluster binding
VIBHAR_03490	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VIBHAR_03491	COG5016	pyruvate
VIBHAR_03491	COG0511	ligase activity, forming carbon-carbon bonds
VIBHAR_03510	COG0527	aspartate kinase activity
VIBHAR_03513	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
VIBHAR_03514	COG1546	Belongs to the CinA family
VIBHAR_03516	COG3385	transposase activity
VIBHAR_03517	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VIBHAR_03523	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VIBHAR_03525	COG0148	phosphopyruvate hydratase activity
VIBHAR_03527	COG3956	TIGRFAM MazG family protein
VIBHAR_03528	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VIBHAR_03531	COG3385	transposase activity
VIBHAR_03533	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
VIBHAR_03534	COG1381	Involved in DNA repair and RecF pathway recombination
VIBHAR_03535	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VIBHAR_03537	COG0681	Belongs to the peptidase S26 family
VIBHAR_03539	COG3086	response to oxidative stress
VIBHAR_03542	COG1595	DNA-templated transcription, initiation
VIBHAR_03543	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
VIBHAR_03545	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
VIBHAR_03549	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBHAR_03550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VIBHAR_03552	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
VIBHAR_03554	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
VIBHAR_03556	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VIBHAR_03557	COG2968	Membrane
VIBHAR_03558	COG0583	DNA-binding transcription factor activity
VIBHAR_03562	COG0668	transmembrane transport
VIBHAR_03564	COG0191	fructose-bisphosphate aldolase activity
VIBHAR_03567	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VIBHAR_03571	COG2356	endonuclease I
VIBHAR_03572	COG1385	rRNA (uridine-N3-)-methyltransferase activity
VIBHAR_03573	COG0189	ligase activity
VIBHAR_03574	COG1678	Uncharacterized ACR, COG1678
VIBHAR_03575	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VIBHAR_03578	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VIBHAR_03579	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
VIBHAR_03580	COG0762	integral membrane protein
VIBHAR_03583	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
VIBHAR_03584	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VIBHAR_03608	COG1012	belongs to the aldehyde dehydrogenase family
VIBHAR_03619	COG3437	response regulator, receiver
VIBHAR_03622	COG1486	melibiose metabolic process
VIBHAR_03623	COG1447	Phosphotransferase system cellobiose-specific component IIA
VIBHAR_03625	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
VIBHAR_03626	COG0726	polysaccharide deacetylase
VIBHAR_03631	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_03633	COG0795	lipopolysaccharide-transporting ATPase activity
VIBHAR_03634	COG0795	lipopolysaccharide-transporting ATPase activity
VIBHAR_03636	COG2927	DNA polymerase III (CHI subunit)
VIBHAR_03637	COG0525	valine-tRNA ligase activity
VIBHAR_03639	COG0456	acetyltransferase
VIBHAR_03649	COG0251	oxidation-reduction process
VIBHAR_03650	COG3344	reverse transcriptase
VIBHAR_03651	COG0204	Acyl-transferase
VIBHAR_03653	COG5007	Belongs to the BolA IbaG family
VIBHAR_03655	COG2854	intermembrane phospholipid transfer
VIBHAR_03656	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VIBHAR_03657	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VIBHAR_03658	COG1127	ABC transporter
VIBHAR_03660	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VIBHAR_03660	COG0517	IMP dehydrogenase activity
VIBHAR_03662	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
VIBHAR_03663	COG1137	ATPase activity
VIBHAR_03665	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VIBHAR_03666	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_03668	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_03669	COG2239	Acts as a magnesium transporter
VIBHAR_03670	COG3344	reverse transcriptase
VIBHAR_03671	COG0312	modulator of DNA gyrase
VIBHAR_03673	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIBHAR_03674	COG0564	pseudouridine synthase activity
VIBHAR_03677	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
VIBHAR_03678	COG0312	modulator of DNA gyrase
VIBHAR_03679	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VIBHAR_03680	COG3164	Protein of unknown function
VIBHAR_03681	COG1530	ribonuclease E activity
VIBHAR_03682	COG0424	maF-like protein
VIBHAR_03683	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
VIBHAR_03684	COG1792	Involved in formation and maintenance of cell shape
VIBHAR_03685	COG1077	Cell shape determining protein MreB Mrl
VIBHAR_03694	COG1459	type II secretion system
VIBHAR_03695	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VIBHAR_03697	COG3409	Peptidoglycan-binding domain 1 protein
VIBHAR_03697	COG3267	Type II secretory pathway component ExeA
VIBHAR_03702	COG2200	EAL domain
VIBHAR_03702	COG2199	diguanylate cyclase activity
VIBHAR_03705	COG0629	single-stranded DNA binding
VIBHAR_03708	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
VIBHAR_03710	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VIBHAR_03711	COG0527	aspartate kinase activity
VIBHAR_03712	COG1410	methionine synthase
VIBHAR_03712	COG0646	methionine synthase
VIBHAR_03715	COG3335	DDE superfamily endonuclease
VIBHAR_04729	COG5464	transposase or invertase
VIBHAR_04743	COG1522	sequence-specific DNA binding
VIBHAR_04745	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
VIBHAR_04749	COG1349	DNA-binding transcription factor activity
VIBHAR_04750	COG2084	Dehydrogenase
VIBHAR_04751	COG3395	kinase activity
VIBHAR_04752	COG0235	Class ii aldolase
VIBHAR_04753	COG3622	Belongs to the hyi family
VIBHAR_04754	COG2610	gluconate transmembrane transporter activity
VIBHAR_04761	COG3634	alkyl hydroperoxide reductase activity
VIBHAR_04762	COG0450	alkyl hydroperoxide reductase
VIBHAR_04763	COG1846	Transcriptional regulator
VIBHAR_04764	COG1764	response to oxidative stress
VIBHAR_04772	COG1136	(ABC) transporter
VIBHAR_04773	COG1335	isochorismatase
VIBHAR_04777	COG2249	NAD(P)H dehydrogenase (quinone) activity
VIBHAR_04785	COG0612	Peptidase, M16
VIBHAR_04794	COG3188	usher protein
VIBHAR_04795	COG3121	Chaperone
VIBHAR_04800	COG3344	reverse transcriptase
VIBHAR_04804	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBHAR_04807	COG0739	heme binding
VIBHAR_04812	COG1609	Transcriptional regulator
VIBHAR_04817	COG1760	l-serine dehydratase
VIBHAR_04824	COG0366	Alpha amylase catalytic
VIBHAR_04827	COG2356	endonuclease I
VIBHAR_04833	COG1982	Orn Lys Arg decarboxylase major
VIBHAR_04834	COG0531	amino acid
VIBHAR_04838	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
VIBHAR_04839	COG1162	GTPase activity
VIBHAR_04840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VIBHAR_04840	COG1263	PTS System
VIBHAR_04842	COG1999	signal sequence binding
VIBHAR_04849	COG0058	SHG alpha-glucan phosphorylase activity
VIBHAR_04850	COG1640	4-alpha-glucanotransferase
VIBHAR_04851	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
VIBHAR_04852	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VIBHAR_04858	COG0366	Alpha amylase catalytic
VIBHAR_04863	COG3366	ferrous iron transmembrane transporter activity
VIBHAR_04864	COG0700	Nucleoside recognition
VIBHAR_04865	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VIBHAR_04866	COG3339	Conserved Protein
VIBHAR_04867	COG1301	dicarboxylic acid transport
VIBHAR_04868	COG3335	DDE superfamily endonuclease
VIBHAR_04870	COG3385	transposase activity
VIBHAR_04871	COG3240	lipase activity
VIBHAR_04877	COG1840	ABC-type Fe3 transport system, periplasmic component
VIBHAR_04880	COG3842	ATPase activity
VIBHAR_04886	COG2990	Protein conserved in bacteria
VIBHAR_04888	COG3385	transposase activity
VIBHAR_04889	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VIBHAR_04891	COG2866	Carboxypeptidase
VIBHAR_04893	COG0583	DNA-binding transcription factor activity
VIBHAR_04899	COG1760	l-serine dehydratase
VIBHAR_04905	COG1388	LysM domain
VIBHAR_04905	COG0741	lytic transglycosylase activity
VIBHAR_04909	COG1815	bacterial-type flagellum-dependent cell motility
VIBHAR_04910	COG1558	bacterial-type flagellum-dependent cell motility
VIBHAR_04911	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
VIBHAR_04912	COG1749	Flagellar hook protein flgE
VIBHAR_04913	COG4787	bacterial-type flagellum-dependent cell motility
VIBHAR_04914	COG4786	Flagellar basal body rod
VIBHAR_04915	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
VIBHAR_04916	COG1706	bacterial-type flagellum-dependent cell motility
VIBHAR_04919	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_04927	COG1522	sequence-specific DNA binding
VIBHAR_04930	COG3335	DDE superfamily endonuclease
VIBHAR_04931	COG1473	amidohydrolase
VIBHAR_04932	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VIBHAR_04934	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VIBHAR_04947	COG0384	phenazine biosynthesis protein PhzF
VIBHAR_04949	COG1360	Flagellar Motor Protein
VIBHAR_04950	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VIBHAR_04951	COG1191	sigma factor activity
VIBHAR_04952	COG1580	Controls the rotational direction of flagella during chemotaxis
VIBHAR_04955	COG1516	flagellar protein fliS
VIBHAR_04956	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
VIBHAR_04961	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VIBHAR_04964	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
VIBHAR_04966	COG1987	bacterial-type flagellum assembly
VIBHAR_04971	COG2204	response regulator
VIBHAR_04974	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VIBHAR_04978	COG2200	EAL domain
VIBHAR_04992	COG0745	RESPONSE REGULATOR receiver
VIBHAR_04997	COG3385	transposase activity
VIBHAR_05000	COG0156	8-amino-7-oxononanoate synthase activity
VIBHAR_05001	COG1063	alcohol dehydrogenase
VIBHAR_05002	COG4974	Belongs to the 'phage' integrase family
VIBHAR_05024	COG4695	Portal protein
VIBHAR_05053	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_05061	COG1063	alcohol dehydrogenase
VIBHAR_05068	COG2433	Pfam Transposase IS66
VIBHAR_05075	COG2433	Pfam Transposase IS66
VIBHAR_05076	COG3335	DDE superfamily endonuclease
VIBHAR_05078	COG3706	GGDEF domain
VIBHAR_05079	COG3335	DDE superfamily endonuclease
VIBHAR_05080	COG3335	DDE superfamily endonuclease
VIBHAR_05083	COG3335	DDE superfamily endonuclease
VIBHAR_05087	COG3385	transposase activity
VIBHAR_05088	COG0668	transmembrane transport
VIBHAR_05091	COG1620	l-lactate permease
VIBHAR_05092	COG0583	DNA-binding transcription factor activity
VIBHAR_05093	COG1505	serine-type exopeptidase activity
VIBHAR_05094	COG4172	Belongs to the ABC transporter superfamily
VIBHAR_05096	COG1067	ATP-dependent peptidase activity
VIBHAR_05099	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VIBHAR_05103	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VIBHAR_05108	COG1122	ATPase activity
VIBHAR_05111	COG1566	PFAM secretion protein HlyD family protein
VIBHAR_05115	COG3706	GGDEF domain
VIBHAR_05118	COG0813	purine-nucleoside phosphorylase activity
VIBHAR_05120	COG3272	Protein of unknown function (DUF1722)
VIBHAR_05121	COG0789	Transcriptional regulator
VIBHAR_05122	COG0415	Belongs to the DNA photolyase family
VIBHAR_05123	COG1376	ErfK ybiS ycfS ynhG family protein
VIBHAR_05123	COG1388	LysM domain
VIBHAR_05125	COG0513	Belongs to the DEAD box helicase family
VIBHAR_05127	COG1770	oligopeptidase
VIBHAR_05137	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
VIBHAR_05138	COG0573	inorganic phosphate transmembrane transporter activity
VIBHAR_05139	COG0581	inorganic phosphate transmembrane transporter activity
VIBHAR_05143	COG2304	oxidoreductase activity
VIBHAR_05147	COG0714	Associated with various cellular activities
VIBHAR_05149	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VIBHAR_05152	COG2197	response regulator
VIBHAR_05158	COG2204	response regulator
VIBHAR_05159	COG4191	Histidine kinase
VIBHAR_05160	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_05164	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VIBHAR_05164	COG2885	chlorophyll binding
VIBHAR_05168	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
VIBHAR_05169	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
VIBHAR_05171	COG1252	NADH dehydrogenase
VIBHAR_05172	COG1301	dicarboxylic acid transport
VIBHAR_05174	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VIBHAR_05175	COG3385	transposase activity
VIBHAR_05184	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_05184	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_05184	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_05185	COG2207	Transcriptional regulator
VIBHAR_05187	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_05188	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_05191	COG2084	Dehydrogenase
VIBHAR_05192	COG0753	catalase activity
VIBHAR_05194	COG2130	NADP-dependent
VIBHAR_05195	COG1309	transcriptional regulator
VIBHAR_05204	COG3206	protein involved in exopolysaccharide biosynthesis
VIBHAR_05204	COG0489	protein tyrosine kinase activity
VIBHAR_05207	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VIBHAR_05209	COG2433	Pfam Transposase IS66
VIBHAR_05212	COG3335	DDE superfamily endonuclease
VIBHAR_05213	COG3842	ATPase activity
VIBHAR_05215	COG1175	transmembrane transport
VIBHAR_05226	COG2354	Protein conserved in bacteria
VIBHAR_05228	COG0401	homolog of Blt101
VIBHAR_05231	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
VIBHAR_05239	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VIBHAR_05240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_05242	COG0848	biopolymer transport protein
VIBHAR_05243	COG0811	peptide transport
VIBHAR_05244	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
VIBHAR_05246	COG3721	Heme iron utilization protein
VIBHAR_05247	COG0748	coenzyme F420 binding
VIBHAR_05250	COG0784	Response regulator, receiver
VIBHAR_05250	COG0835	chemotaxis
VIBHAR_05251	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VIBHAR_05253	COG0366	Alpha amylase catalytic
VIBHAR_05263	COG2433	Pfam Transposase IS66
VIBHAR_05269	COG0583	DNA-binding transcription factor activity
VIBHAR_05274	COG2249	NAD(P)H dehydrogenase (quinone) activity
VIBHAR_05276	COG0583	DNA-binding transcription factor activity
VIBHAR_05287	COG4977	sequence-specific DNA binding
VIBHAR_05288	COG0673	inositol 2-dehydrogenase activity
VIBHAR_05289	COG2194	sulfuric ester hydrolase activity
VIBHAR_05290	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VIBHAR_05292	COG2205	protein histidine kinase activity
VIBHAR_05293	COG0745	RESPONSE REGULATOR receiver
VIBHAR_05300	COG3335	DDE superfamily endonuclease
VIBHAR_05303	COG4221	oxidoreductase activity
VIBHAR_05306	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VIBHAR_05310	COG3385	transposase activity
VIBHAR_05311	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIBHAR_05316	COG1418	mRNA catabolic process
VIBHAR_05319	COG0402	S-adenosylhomocysteine deaminase activity
VIBHAR_05320	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
VIBHAR_05323	COG2239	Acts as a magnesium transporter
VIBHAR_05324	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
VIBHAR_05325	COG1566	PFAM secretion protein HlyD family protein
VIBHAR_05331	COG0745	RESPONSE REGULATOR receiver
VIBHAR_05332	COG2205	protein histidine kinase activity
VIBHAR_05334	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBHAR_05335	COG0531	amino acid
VIBHAR_05336	COG1522	sequence-specific DNA binding
VIBHAR_05338	COG0583	DNA-binding transcription factor activity
VIBHAR_05344	COG0673	inositol 2-dehydrogenase activity
VIBHAR_05353	COG3385	transposase activity
VIBHAR_05361	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIBHAR_05362	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VIBHAR_05364	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_05366	COG0183	Belongs to the thiolase family
VIBHAR_05374	COG2433	Pfam Transposase IS66
VIBHAR_05375	COG3005	denitrification pathway
VIBHAR_05379	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VIBHAR_05380	COG3850	Histidine kinase
VIBHAR_05381	COG2197	response regulator
VIBHAR_05384	COG2195	Cleaves the N-terminal amino acid of tripeptides
VIBHAR_05387	COG0840	transmembrane signaling receptor activity
VIBHAR_05389	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VIBHAR_05390	COG0545	Peptidyl-prolyl cis-trans isomerase
VIBHAR_05396	COG1278	Cold shock
VIBHAR_05397	COG3036	rescue of stalled ribosome
VIBHAR_05399	COG2199	diguanylate cyclase activity
VIBHAR_05403	COG0577	efflux transmembrane transporter activity
VIBHAR_05403	COG1136	(ABC) transporter
VIBHAR_05408	COG0783	Belongs to the Dps family
VIBHAR_05410	COG1619	proteins homologs of microcin C7 resistance protein MccF
VIBHAR_05411	COG2133	pyrroloquinoline quinone binding
VIBHAR_05412	COG1454	alcohol dehydrogenase
VIBHAR_05413	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
VIBHAR_05419	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VIBHAR_05420	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VIBHAR_05421	COG3186	Phenylalanine-4-hydroxylase
VIBHAR_05428	COG3530	Putative quorum-sensing-regulated virulence factor
VIBHAR_05434	COG0454	-acetyltransferase
VIBHAR_05440	COG0523	cobalamin synthesis protein
VIBHAR_05441	COG3385	transposase activity
VIBHAR_05442	COG5002	protein histidine kinase activity
VIBHAR_05442	COG5001	Diguanylate cyclase
VIBHAR_05442	COG3447	MASE1 domain protein
VIBHAR_05443	COG0513	Belongs to the DEAD box helicase family
VIBHAR_05448	COG2200	EAL domain
VIBHAR_05449	COG1119	ATPase activity
VIBHAR_05451	COG3005	denitrification pathway
VIBHAR_05452	COG0243	molybdopterin cofactor binding
VIBHAR_05454	COG2433	Pfam Transposase IS66
VIBHAR_05463	COG3344	reverse transcriptase
VIBHAR_05466	COG3278	Belongs to the heme-copper respiratory oxidase family
VIBHAR_05478	COG1024	Enoyl-CoA hydratase
VIBHAR_05479	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
VIBHAR_05480	COG1960	acyl-CoA dehydrogenase activity
VIBHAR_05482	COG0183	Belongs to the thiolase family
VIBHAR_05485	COG1024	Enoyl-CoA hydratase
VIBHAR_05486	COG1024	Enoyl-CoA hydratase
VIBHAR_05488	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_05491	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
VIBHAR_05492	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
VIBHAR_05493	COG1845	cytochrome c oxidase, subunit III
VIBHAR_05494	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
VIBHAR_05496	COG0446	pyridine nucleotide-disulphide oxidoreductase
VIBHAR_05496	COG1902	pentaerythritol trinitrate reductase activity
VIBHAR_05501	COG1012	belongs to the aldehyde dehydrogenase family
VIBHAR_05503	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBHAR_05506	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBHAR_05510	COG4372	Transposase
VIBHAR_05511	COG2433	Pfam Transposase IS66
VIBHAR_05522	COG2433	Pfam Transposase IS66
VIBHAR_05528	COG1126	abc transporter atp-binding protein
VIBHAR_05529	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBHAR_05530	COG4215	(ABC) transporter
VIBHAR_05531	COG4160	amino acid transport
VIBHAR_05539	COG0431	NADPH-dependent FMN reductase
VIBHAR_05539	COG1053	succinate dehydrogenase
VIBHAR_05539	COG3976	FMN-binding domain protein
VIBHAR_05544	COG3335	DDE superfamily endonuclease
VIBHAR_05545	COG2200	EAL domain
VIBHAR_05550	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_05559	COG0443	Heat shock 70 kDa protein
VIBHAR_05560	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_05570	COG0745	RESPONSE REGULATOR receiver
VIBHAR_05572	COG3385	transposase activity
VIBHAR_05578	COG3706	GGDEF domain
VIBHAR_05580	COG0814	amino acid
VIBHAR_05582	COG0243	molybdopterin cofactor binding
VIBHAR_05583	COG1648	precorrin-2 dehydrogenase activity
VIBHAR_05583	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VIBHAR_05588	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
VIBHAR_05588	COG1116	anion transmembrane transporter activity
VIBHAR_05589	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
VIBHAR_05590	COG1116	anion transmembrane transporter activity
VIBHAR_05591	COG2146	nitrite reductase [NAD(P)H] activity
VIBHAR_05591	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
VIBHAR_05603	COG0739	heme binding
VIBHAR_05604	COG3335	DDE superfamily endonuclease
VIBHAR_05606	COG3335	DDE superfamily endonuclease
VIBHAR_05615	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VIBHAR_05623	COG0739	heme binding
VIBHAR_05626	COG2433	Pfam Transposase IS66
VIBHAR_05628	COG3385	transposase activity
VIBHAR_05637	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
VIBHAR_05637	COG2755	lipolytic protein G-D-S-L family
VIBHAR_05639	COG1902	pentaerythritol trinitrate reductase activity
VIBHAR_05640	COG0346	lactoylglutathione lyase activity
VIBHAR_05645	COG3335	DDE superfamily endonuclease
VIBHAR_05646	COG0840	transmembrane signaling receptor activity
VIBHAR_05653	COG0420	3'-5' exonuclease activity
VIBHAR_05654	COG0419	ATPase involved in DNA repair
VIBHAR_05656	COG3469	chitinase activity
VIBHAR_05660	COG3335	DDE superfamily endonuclease
VIBHAR_05664	COG3040	lipid binding
VIBHAR_05668	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
VIBHAR_05671	COG2425	protein containing a von Willebrand factor type A (vWA) domain
VIBHAR_05675	COG0277	FAD linked oxidase domain protein
VIBHAR_05687	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VIBHAR_05687	COG1648	precorrin-2 dehydrogenase activity
VIBHAR_05690	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VIBHAR_05691	COG0840	transmembrane signaling receptor activity
VIBHAR_05695	COG3335	DDE superfamily endonuclease
VIBHAR_05696	COG2814	Major facilitator Superfamily
VIBHAR_05698	COG3118	belongs to the thioredoxin family
VIBHAR_05699	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VIBHAR_05700	COG3385	transposase activity
VIBHAR_05713	COG1328	CTP reductase activity
VIBHAR_05714	COG0602	queuosine metabolic process
VIBHAR_05715	COG0534	Mate efflux family protein
VIBHAR_05723	COG3111	PFAM Bacterial OB fold (BOF) protein
VIBHAR_05725	COG0725	ABC transporter, periplasmic molybdate-binding protein
VIBHAR_05726	COG4149	molybdate abc transporter
VIBHAR_05727	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
VIBHAR_05729	COG3706	GGDEF domain
VIBHAR_05729	COG4251	negative regulation of phosphorylation
VIBHAR_05729	COG5001	Diguanylate cyclase
VIBHAR_05729	COG2203	Gaf domain
VIBHAR_05730	COG3706	GGDEF domain
VIBHAR_05730	COG0745	RESPONSE REGULATOR receiver
VIBHAR_05733	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
VIBHAR_05734	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
VIBHAR_05739	COG3140	Belongs to the UPF0181 family
VIBHAR_05740	COG3385	transposase activity
VIBHAR_05757	COG2433	Pfam Transposase IS66
VIBHAR_05783	COG0023	Translation Initiation Factor
VIBHAR_05787	COG0045	succinate-CoA ligase (ADP-forming) activity
VIBHAR_05787	COG1042	CoA-binding domain protein
VIBHAR_05787	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VIBHAR_05788	COG0583	DNA-binding transcription factor activity
VIBHAR_05790	COG3385	transposase activity
VIBHAR_05793	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VIBHAR_05794	COG5002	protein histidine kinase activity
VIBHAR_05794	COG3447	MASE1 domain protein
VIBHAR_05794	COG5001	Diguanylate cyclase
VIBHAR_05796	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
VIBHAR_05797	COG1984	allophanate hydrolase subunit 2
VIBHAR_05800	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
VIBHAR_05802	COG4181	ATPase activity
VIBHAR_05803	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VIBHAR_05804	COG5001	Diguanylate cyclase
VIBHAR_05804	COG3300	MHYT domain
VIBHAR_05812	COG4533	DNA binding
VIBHAR_05814	COG2050	protein possibly involved in aromatic compounds catabolism
VIBHAR_05815	COG0501	Belongs to the peptidase M48B family
VIBHAR_05817	COG2067	long-chain fatty acid transport protein
VIBHAR_05818	COG2267	carboxylic ester hydrolase activity
VIBHAR_05821	COG1410	methionine synthase
VIBHAR_05821	COG0646	methionine synthase
VIBHAR_05822	COG2433	Pfam Transposase IS66
VIBHAR_05832	COG1388	LysM domain
VIBHAR_05832	COG1470	cell adhesion involved in biofilm formation
VIBHAR_05847	COG4771	TonB-dependent receptor
VIBHAR_05858	COG1522	sequence-specific DNA binding
VIBHAR_05865	COG0515	serine threonine protein kinase
VIBHAR_05870	COG3501	Rhs element vgr protein
VIBHAR_05873	COG2204	response regulator
VIBHAR_05878	COG3385	transposase activity
VIBHAR_05879	COG2076	Multidrug Resistance protein
VIBHAR_05880	COG2076	Multidrug Resistance protein
VIBHAR_05882	COG0671	phosphoesterase, PA-phosphatase related
VIBHAR_05888	COG2962	Rard protein
VIBHAR_05890	COG0835	chemotaxis
VIBHAR_05890	COG0784	Response regulator, receiver
VIBHAR_05892	COG0778	Nitroreductase
VIBHAR_05893	COG3335	DDE superfamily endonuclease
VIBHAR_05894	COG2197	response regulator
VIBHAR_05897	COG3335	DDE superfamily endonuclease
VIBHAR_05899	COG3469	chitinase activity
VIBHAR_05906	COG2433	Pfam Transposase IS66
VIBHAR_05910	COG3385	transposase activity
VIBHAR_05912	COG0861	Integral membrane protein TerC family
VIBHAR_05914	COG0737	Belongs to the 5'-nucleotidase family
VIBHAR_05915	COG3593	DNA synthesis involved in DNA repair
VIBHAR_05916	COG3344	reverse transcriptase
VIBHAR_05922	COG0583	DNA-binding transcription factor activity
VIBHAR_05923	COG2116	formate transmembrane transporter activity
VIBHAR_05925	COG3038	cytochrome b561
VIBHAR_05929	COG2433	Pfam Transposase IS66
VIBHAR_05932	COG4943	cyclic-guanylate-specific phosphodiesterase activity
VIBHAR_05933	COG0513	Belongs to the DEAD box helicase family
VIBHAR_05934	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
VIBHAR_05938	COG0546	phosphoglycolate phosphatase activity
VIBHAR_05942	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBHAR_05944	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VIBHAR_05946	COG2207	Transcriptional regulator
VIBHAR_05947	COG1979	alcohol dehydrogenase
VIBHAR_05950	COG1126	abc transporter atp-binding protein
VIBHAR_05951	COG0765	amino acid transport
VIBHAR_05952	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VIBHAR_05953	COG0765	amino acid transport
VIBHAR_05954	COG2199	diguanylate cyclase activity
VIBHAR_05954	COG2200	EAL domain
VIBHAR_05954	COG2203	Gaf domain
VIBHAR_05957	COG1609	Transcriptional regulator
VIBHAR_05958	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_05958	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VIBHAR_05959	COG1105	Belongs to the carbohydrate kinase PfkB family
VIBHAR_05960	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_05960	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_05960	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
VIBHAR_05964	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_05965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VIBHAR_05967	COG3385	transposase activity
VIBHAR_05968	COG0404	The glycine cleavage system catalyzes the degradation of glycine
VIBHAR_05971	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VIBHAR_05976	COG1470	cell adhesion involved in biofilm formation
VIBHAR_05976	COG1388	LysM domain
VIBHAR_05990	COG1470	cell adhesion involved in biofilm formation
VIBHAR_05990	COG1388	LysM domain
VIBHAR_06000	COG3335	DDE superfamily endonuclease
VIBHAR_06007	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
VIBHAR_06008	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_06009	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_06010	COG1120	ATPase activity
VIBHAR_06019	COG0583	DNA-binding transcription factor activity
VIBHAR_06023	COG1132	(ABC) transporter
VIBHAR_06034	COG2814	Major facilitator Superfamily
VIBHAR_06044	COG3335	DDE superfamily endonuclease
VIBHAR_06055	COG2433	Pfam Transposase IS66
VIBHAR_06056	COG1484	DNA-dependent DNA replication
VIBHAR_06058	COG4584	PFAM Integrase catalytic
VIBHAR_06063	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VIBHAR_06067	COG0717	Belongs to the dCTP deaminase family
VIBHAR_06069	COG0717	Belongs to the dCTP deaminase family
VIBHAR_06087	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
VIBHAR_06090	COG3335	DDE superfamily endonuclease
VIBHAR_06095	COG3069	C4-dicarboxylate transmembrane transporter activity
VIBHAR_06103	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VIBHAR_06105	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VIBHAR_06119	COG2205	protein histidine kinase activity
VIBHAR_06119	COG2198	Histidine kinase
VIBHAR_06119	COG0784	Response regulator, receiver
VIBHAR_06120	COG1879	ABC-type sugar transport system periplasmic component
VIBHAR_06122	COG0210	DNA helicase
VIBHAR_06123	COG1289	transmembrane transporter activity
VIBHAR_06131	COG0789	Transcriptional regulator
VIBHAR_06132	COG4604	ABC transporter, ATP-binding protein
VIBHAR_06133	COG4605	iron ion homeostasis
VIBHAR_06134	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VIBHAR_06135	COG4607	ABC-type enterochelin transport system periplasmic component
VIBHAR_06138	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
VIBHAR_06141	COG1609	Transcriptional regulator
VIBHAR_06142	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBHAR_06143	COG1879	ABC-type sugar transport system periplasmic component
VIBHAR_06144	COG1172	Belongs to the binding-protein-dependent transport system permease family
VIBHAR_06145	COG1129	ABC transporter
VIBHAR_06147	COG5001	Diguanylate cyclase
VIBHAR_06156	COG0586	Pfam SNARE associated Golgi protein
VIBHAR_06166	COG3344	reverse transcriptase
VIBHAR_06167	COG2205	protein histidine kinase activity
VIBHAR_06167	COG0784	Response regulator, receiver
VIBHAR_06174	COG0330	HflC and HflK could
VIBHAR_06176	COG0517	IMP dehydrogenase activity
VIBHAR_06176	COG4175	Glycine betaine
VIBHAR_06177	COG4176	ABC-type proline glycine betaine transport system permease component
VIBHAR_06186	COG2885	chlorophyll binding
VIBHAR_06194	COG0455	bacterial-type flagellum organization
VIBHAR_06196	COG4964	Belongs to the GSP D family
VIBHAR_06200	COG0583	DNA-binding transcription factor activity
VIBHAR_06217	COG1061	Type III restriction enzyme res subunit
VIBHAR_06226	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
VIBHAR_06226	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
VIBHAR_06230	COG4989	oxidoreductase activity
VIBHAR_06236	COG0303	'Molybdopterin
VIBHAR_06237	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VIBHAR_06246	COG2963	transposase activity
VIBHAR_06247	COG2801	Transposase and inactivated derivatives
VIBHAR_06252	COG2897	thiosulfate sulfurtransferase activity
VIBHAR_06257	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VIBHAR_06259	COG2814	Major facilitator Superfamily
VIBHAR_06261	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VIBHAR_06265	COG1612	heme a metabolic process
VIBHAR_06269	COG1845	cytochrome c oxidase, subunit III
VIBHAR_06270	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
VIBHAR_06271	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
VIBHAR_06273	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VIBHAR_06275	COG3385	transposase activity
VIBHAR_06278	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_06282	COG0179	Fumarylacetoacetate (FAA) hydrolase
VIBHAR_06291	COG0697	spore germination
VIBHAR_06295	COG2814	Major facilitator Superfamily
VIBHAR_06296	COG0583	DNA-binding transcription factor activity
VIBHAR_06304	COG1120	ATPase activity
VIBHAR_06306	COG0739	heme binding
VIBHAR_06313	COG3335	DDE superfamily endonuclease
VIBHAR_06317	COG3344	reverse transcriptase
VIBHAR_06320	COG0814	amino acid
VIBHAR_06333	COG3344	reverse transcriptase
VIBHAR_06336	COG1733	regulation of RNA biosynthetic process
VIBHAR_06339	COG0798	PFAM Bile acid sodium symporter
VIBHAR_06342	COG1881	PFAM PEBP family protein
VIBHAR_06343	COG0251	oxidation-reduction process
VIBHAR_06344	COG2706	6-phosphogluconolactonase activity
VIBHAR_06346	COG0800	Aldolase
VIBHAR_06348	COG0800	Aldolase
VIBHAR_06349	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VIBHAR_06350	COG4145	pantothenate transmembrane transporter activity
VIBHAR_06351	COG3335	DDE superfamily endonuclease
VIBHAR_06353	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
VIBHAR_06356	COG0837	glucose binding
VIBHAR_06356	COG1737	Transcriptional regulator
VIBHAR_06358	COG1131	(ABC) transporter
VIBHAR_06359	COG0842	Transport permease protein
VIBHAR_06362	COG3383	formate dehydrogenase (NAD+) activity
VIBHAR_06366	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBHAR_06368	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_06369	COG0583	DNA-binding transcription factor activity
VIBHAR_06372	COG0494	nUDIX hydrolase
VIBHAR_06375	COG1858	cytochrome C peroxidase
VIBHAR_06376	COG3335	DDE superfamily endonuclease
VIBHAR_06378	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VIBHAR_06379	COG3344	reverse transcriptase
VIBHAR_06386	COG1505	serine-type exopeptidase activity
VIBHAR_06387	COG0488	(ABC) transporter
VIBHAR_06388	COG3335	DDE superfamily endonuclease
VIBHAR_06389	COG0488	(ABC) transporter
VIBHAR_06392	COG0589	response to stress
VIBHAR_06393	COG3385	transposase activity
VIBHAR_06395	COG0584	glycerophosphoryl diester phosphodiesterase
VIBHAR_06397	COG1175	transmembrane transport
VIBHAR_06398	COG0395	ABC-type sugar transport system, permease component
VIBHAR_06399	COG3842	ATPase activity
VIBHAR_06402	COG2433	Pfam Transposase IS66
VIBHAR_06409	COG1846	Transcriptional regulator
VIBHAR_06411	COG0523	cobalamin synthesis protein
VIBHAR_06413	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
VIBHAR_06415	COG4667	esterase of the alpha-beta hydrolase superfamily
VIBHAR_06417	COG1741	Belongs to the pirin family
VIBHAR_06418	COG1278	Cold shock
VIBHAR_06421	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VIBHAR_06424	COG2226	methyltransferase
VIBHAR_06426	COG1686	Belongs to the peptidase S11 family
VIBHAR_06429	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBHAR_06431	COG0625	glutathione transferase activity
VIBHAR_06441	COG2433	Pfam Transposase IS66
VIBHAR_06455	COG2274	protein secretion by the type I secretion system
VIBHAR_06458	COG3344	reverse transcriptase
VIBHAR_06461	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_06466	COG3746	phosphate-selective porin O and P
VIBHAR_06472	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBHAR_06483	COG0513	Belongs to the DEAD box helicase family
VIBHAR_06484	COG2433	Pfam Transposase IS66
VIBHAR_06495	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_06496	COG2814	Major facilitator Superfamily
VIBHAR_06498	COG1902	pentaerythritol trinitrate reductase activity
VIBHAR_06500	COG3853	Toxic anion resistance protein (TelA)
VIBHAR_06502	COG2255	four-way junction helicase activity
VIBHAR_06507	COG3122	Protein conserved in bacteria
VIBHAR_06508	COG2321	neutral zinc metallopeptidase
VIBHAR_06511	COG0583	DNA-binding transcription factor activity
VIBHAR_06515	COG0252	asparaginase activity
VIBHAR_06517	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VIBHAR_06517	COG0574	Belongs to the PEP-utilizing enzyme family
VIBHAR_06519	COG2197	response regulator
VIBHAR_06520	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VIBHAR_06524	COG3335	DDE superfamily endonuclease
VIBHAR_06528	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
VIBHAR_06534	COG3385	transposase activity
VIBHAR_06536	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VIBHAR_06541	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBHAR_06545	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VIBHAR_06558	COG4948	Mandelate Racemase Muconate Lactonizing
VIBHAR_06563	COG4176	ABC-type proline glycine betaine transport system permease component
VIBHAR_06564	COG3448	diguanylate cyclase activity
VIBHAR_06564	COG4175	Glycine betaine
VIBHAR_06568	COG0583	DNA-binding transcription factor activity
VIBHAR_06570	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VIBHAR_06572	COG3136	membrane protein required for alginate biosynthesis
VIBHAR_06577	COG1335	isochorismatase
VIBHAR_06580	COG0753	catalase activity
VIBHAR_06583	COG1349	DNA-binding transcription factor activity
VIBHAR_06584	COG0346	lactoylglutathione lyase activity
VIBHAR_06586	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBHAR_06586	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBHAR_06588	COG3335	DDE superfamily endonuclease
VIBHAR_06592	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VIBHAR_06596	COG3344	reverse transcriptase
VIBHAR_06597	COG3537	Alpha-1,2-mannosidase
VIBHAR_06598	COG3537	Alpha-1,2-mannosidase
VIBHAR_06601	COG3537	Alpha-1,2-mannosidase
VIBHAR_06602	COG3537	Alpha-1,2-mannosidase
VIBHAR_06605	COG1280	lysine exporter protein (LysE YggA)
VIBHAR_06606	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VIBHAR_06609	COG3344	reverse transcriptase
VIBHAR_06613	COG4628	conserved protein (DUF2132)
VIBHAR_06614	COG0488	(ABC) transporter
VIBHAR_06617	COG0346	lactoylglutathione lyase activity
VIBHAR_06618	COG0384	phenazine biosynthesis protein PhzF
VIBHAR_06625	COG2205	protein histidine kinase activity
VIBHAR_06627	COG0745	RESPONSE REGULATOR receiver
VIBHAR_06629	COG0454	-acetyltransferase
VIBHAR_06630	COG0148	phosphopyruvate hydratase activity
VIBHAR_06632	COG2814	Major facilitator Superfamily
VIBHAR_06634	COG2988	succinylglutamate desuccinylase activity
VIBHAR_06643	COG0628	permease
VIBHAR_06645	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VIBHAR_06648	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VIBHAR_06650	COG4628	conserved protein (DUF2132)
VIBHAR_06651	COG0583	DNA-binding transcription factor activity
VIBHAR_06653	COG1686	Belongs to the peptidase S11 family
VIBHAR_06659	COG0415	Belongs to the DNA photolyase family
VIBHAR_06660	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
VIBHAR_06662	COG4667	esterase of the alpha-beta hydrolase superfamily
VIBHAR_06663	COG2095	MarC family integral membrane protein
VIBHAR_06665	COG1596	polysaccharide export
VIBHAR_06677	COG3335	DDE superfamily endonuclease
VIBHAR_06682	COG1011	Hydrolase
VIBHAR_06689	COG1765	OsmC-like protein
VIBHAR_06690	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBHAR_06690	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VIBHAR_06692	COG3046	protein related to deoxyribodipyrimidine photolyase
VIBHAR_06693	COG0415	Belongs to the DNA photolyase family
VIBHAR_06694	COG3706	GGDEF domain
VIBHAR_06703	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VIBHAR_06709	COG3033	Beta-eliminating lyase
VIBHAR_06715	COG0579	oxidoreductase
VIBHAR_06721	COG1114	Component of the transport system for branched-chain amino acids
VIBHAR_06724	COG2723	6-phospho-beta-galactosidase activity
VIBHAR_06732	COG0583	DNA-binding transcription factor activity
VIBHAR_06734	COG0189	ligase activity
VIBHAR_06735	COG0189	ligase activity
VIBHAR_06735	COG4067	protein conserved in archaea
VIBHAR_06737	COG1166	arginine decarboxylase activity
VIBHAR_06738	COG0010	Belongs to the arginase family
VIBHAR_06739	COG2814	Major facilitator Superfamily
VIBHAR_06740	COG1770	oligopeptidase
VIBHAR_06743	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VIBHAR_06744	COG1121	(ABC) transporter
VIBHAR_06745	COG0803	Belongs to the bacterial solute-binding protein 9 family
VIBHAR_06752	COG3344	reverse transcriptase
VIBHAR_06757	COG0848	biopolymer transport protein
VIBHAR_06758	COG0811	peptide transport
VIBHAR_06759	COG0811	peptide transport
VIBHAR_06763	COG0745	RESPONSE REGULATOR receiver
VIBHAR_06765	COG0584	glycerophosphoryl diester phosphodiesterase
VIBHAR_06767	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VIBHAR_06779	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_06787	COG2433	Pfam Transposase IS66
VIBHAR_06792	COG2433	Pfam Transposase IS66
VIBHAR_06798	COG3344	reverse transcriptase
VIBHAR_06806	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VIBHAR_06819	COG4974	Belongs to the 'phage' integrase family
VIBHAR_06823	COG2433	Pfam Transposase IS66
VIBHAR_06836	COG0312	modulator of DNA gyrase
VIBHAR_06837	COG0312	modulator of DNA gyrase
VIBHAR_06838	COG0351	phosphomethylpyrimidine kinase
VIBHAR_06839	COG1116	anion transmembrane transporter activity
VIBHAR_06840	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
VIBHAR_06841	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
VIBHAR_06842	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
VIBHAR_06845	COG0671	phosphoesterase, PA-phosphatase related
VIBHAR_06846	COG0243	molybdopterin cofactor binding
VIBHAR_06847	COG3005	denitrification pathway
VIBHAR_06849	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_06858	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBHAR_06862	COG0477	Major facilitator Superfamily
VIBHAR_06863	COG1929	Belongs to the glycerate kinase type-1 family
VIBHAR_06864	COG3835	regulator
VIBHAR_06869	COG3344	reverse transcriptase
VIBHAR_06878	COG2433	Pfam Transposase IS66
VIBHAR_06895	COG3408	Glycogen debranching enzyme
VIBHAR_06895	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
VIBHAR_06902	COG2814	Major facilitator Superfamily
VIBHAR_06904	COG3047	cAMP biosynthetic process
VIBHAR_06906	COG1357	PFAM Pentapeptide repeats (8 copies)
VIBHAR_06909	COG2076	Multidrug Resistance protein
VIBHAR_06921	COG0583	DNA-binding transcription factor activity
VIBHAR_06925	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
VIBHAR_06928	COG3152	Membrane
VIBHAR_06931	COG2199	diguanylate cyclase activity
VIBHAR_06933	COG0561	phosphatase activity
VIBHAR_06934	COG0564	pseudouridine synthase activity
VIBHAR_06935	COG0534	Mate efflux family protein
VIBHAR_06937	COG3842	ATPase activity
VIBHAR_06938	COG2723	6-phospho-beta-galactosidase activity
VIBHAR_06939	COG0395	ABC-type sugar transport system, permease component
VIBHAR_06943	COG1609	Transcriptional regulator
VIBHAR_06948	COG3335	DDE superfamily endonuclease
VIBHAR_06949	COG5001	Diguanylate cyclase
VIBHAR_06951	COG3385	transposase activity
VIBHAR_06960	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
VIBHAR_06962	COG1484	DNA-dependent DNA replication
VIBHAR_06964	COG4584	PFAM Integrase catalytic
VIBHAR_06965	COG2433	Pfam Transposase IS66
VIBHAR_06971	COG3335	DDE superfamily endonuclease
VIBHAR_06972	COG2433	Pfam Transposase IS66
VIBHAR_06986	COG2433	Pfam Transposase IS66
VIBHAR_06994	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
VIBHAR_06996	COG3344	reverse transcriptase
VIBHAR_07004	COG0786	glutamate:sodium symporter activity
VIBHAR_07005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VIBHAR_07006	COG1131	(ABC) transporter
VIBHAR_07016	COG1028	Short-chain dehydrogenase reductase Sdr
VIBHAR_07017	COG0786	glutamate:sodium symporter activity
VIBHAR_07023	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VIBHAR_07024	COG3279	Response regulator of the LytR AlgR family
VIBHAR_07025	COG3275	phosphorelay sensor kinase activity
VIBHAR_07031	COG0583	DNA-binding transcription factor activity
VIBHAR_07034	COG0772	Belongs to the SEDS family
VIBHAR_07040	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
VIBHAR_07040	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIBHAR_07041	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
VIBHAR_07041	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VIBHAR_07043	COG0444	Belongs to the ABC transporter superfamily
VIBHAR_07051	COG3385	transposase activity
VIBHAR_07052	COG1444	tRNA N-acetyltransferase activity
VIBHAR_07058	COG4166	transmembrane transport
VIBHAR_07059	COG0655	NAD(P)H dehydrogenase (quinone) activity
VIBHAR_07062	COG3335	DDE superfamily endonuclease
VIBHAR_07111	COG1132	(ABC) transporter
VIBHAR_07122	COG3335	DDE superfamily endonuclease
VIBHAR_p08165	COG2003	Belongs to the UPF0758 family
VIBHAR_p08178	COG2433	Pfam Transposase IS66
VIBHAR_p08189	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_p08193	COG3547	Transposase (IS116 IS110 IS902 family)
VIBHAR_p08201	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VIBHAR_p08207	COG3504	Conjugal transfer protein
VIBHAR_p08208	COG3736	Type IV secretory pathway, component VirB8
VIBHAR_p08213	COG3451	type IV secretory pathway VirB4
VIBHAR_p08222	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
VIBHAR_p08227	COG1192	Involved in chromosome partitioning
VIBHAR_p08236	COG2433	Pfam Transposase IS66
VIBHAR_p08258	COG3344	reverse transcriptase
VIBHAR_p08267	COG1192	Involved in chromosome partitioning
VIBHAR_p08269	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VIBHAR_p08270	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
VIBHAR_p08274	COG3344	reverse transcriptase
VIBHAR_p08277	COG3335	DDE superfamily endonuclease