locus-tag class description CAY59_00040 PF10625 Universal stress protein B (UspB) CAY59_00045 PF00210 Ferritin-like domain CAY59_00050 PF00582 Universal stress protein family CAY59_00055 PF00892 EamA-like transporter family CAY59_00065 PF04445 Putative SAM-dependent methyltransferase CAY59_00070 PF08448 PAS fold CAY59_00070 PF00990 Diguanylate cyclase, GGDEF domain CAY59_00070 PF00563 EAL domain CAY59_00075 PF01037 Lrp/AsnC ligand binding domain CAY59_00080 PF01432 Peptidase family M3 CAY59_00090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CAY59_00100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_00105 PF01081 KDPG and KHG aldolase CAY59_00110 PF02447 GntP family permease CAY59_00115 PF01202 Shikimate kinase CAY59_00120 PF00920 Dehydratase family CAY59_00125 PF00893 Small Multidrug Resistance protein CAY59_00130 PF00893 Small Multidrug Resistance protein CAY59_00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_00135 PF03466 LysR substrate binding domain CAY59_00140 PF00356 Bacterial regulatory proteins, lacI family CAY59_00140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CAY59_00145 PF00069 Protein kinase domain CAY59_00175 PF12911 N-terminal TM domain of oligopeptide transport permease C CAY59_00175 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_00185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_00190 PF00005 ABC transporter CAY59_00190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_00200 PF13419 Haloacid dehalogenase-like hydrolase CAY59_00230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAY59_00235 PF13361 UvrD-like helicase C-terminal domain CAY59_00235 PF00580 UvrD/REP helicase N-terminal domain CAY59_00240 PF08359 YsiA-like protein, C-terminal region CAY59_00240 PF00440 Bacterial regulatory proteins, tetR family CAY59_00245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_00250 PF00873 AcrB/AcrD/AcrF family CAY59_00255 PF04380 Membrane fusogenic activity CAY59_00265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CAY59_00265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CAY59_00270 PF03466 LysR substrate binding domain CAY59_00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_00315 PF12724 Flavodoxin domain CAY59_00320 PF02386 Cation transport protein CAY59_00325 PF09186 Domain of unknown function (DUF1949) CAY59_00325 PF01205 Uncharacterized protein family UPF0029 CAY59_00330 PF00378 Enoyl-CoA hydratase/isomerase CAY59_00330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAY59_00330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAY59_00335 PF02803 Thiolase, C-terminal domain CAY59_00335 PF00108 Thiolase, N-terminal domain CAY59_00340 PF00107 Zinc-binding dehydrogenase CAY59_00340 PF08240 Alcohol dehydrogenase GroES-like domain CAY59_00345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_00345 PF03466 LysR substrate binding domain CAY59_00355 PF01206 Sulfurtransferase TusA CAY59_00365 PF01169 Uncharacterized protein family UPF0016 CAY59_00370 PF02091 Glycyl-tRNA synthetase alpha subunit CAY59_00375 PF02092 Glycyl-tRNA synthetase beta subunit CAY59_00375 PF05746 DALR anticodon binding domain CAY59_00380 PF00072 Response regulator receiver domain CAY59_00380 PF00486 Transcriptional regulatory protein, C terminal CAY59_00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_00385 PF00512 His Kinase A (phospho-acceptor) domain CAY59_00385 PF00672 HAMP domain CAY59_00390 PF01389 OmpA-like transmembrane domain CAY59_00390 PF00691 OmpA family CAY59_00425 PF00437 Type II/IV secretion system protein CAY59_00440 PF04972 BON domain CAY59_00440 PF00263 Bacterial type II and III secretion system protein CAY59_00440 PF13629 Pilus formation protein N terminal region CAY59_00460 PF00155 Aminotransferase class I and II CAY59_00465 PF00011 Hsp20/alpha crystallin family CAY59_00470 PF18053 DNA gyrase B subunit insert domain CAY59_00470 PF00204 DNA gyrase B CAY59_00470 PF00986 DNA gyrase B subunit, carboxyl terminus CAY59_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_00470 PF01751 Toprim domain CAY59_00475 PF02463 RecF/RecN/SMC N terminal domain CAY59_00480 PF02767 DNA polymerase III beta subunit, central domain CAY59_00480 PF02768 DNA polymerase III beta subunit, C-terminal domain CAY59_00480 PF00712 DNA polymerase III beta subunit, N-terminal domain CAY59_00485 PF00308 Bacterial dnaA protein CAY59_00485 PF11638 DnaA N-terminal domain CAY59_00485 PF08299 Bacterial dnaA protein helix-turn-helix CAY59_00495 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_00500 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_00505 PF00005 ABC transporter CAY59_00510 PF00468 Ribosomal protein L34 CAY59_00515 PF00825 Ribonuclease P CAY59_00520 PF01809 Putative membrane protein insertion efficiency factor CAY59_00525 PF14849 YidC periplasmic domain CAY59_00525 PF02096 60Kd inner membrane protein CAY59_00530 PF12631 MnmE helical domain CAY59_00530 PF01926 50S ribosome-binding GTPase CAY59_00530 PF10396 GTP-binding protein TrmE N-terminus CAY59_00535 PF00258 Flavodoxin CAY59_00540 PF13932 GidA associated domain CAY59_00540 PF01134 Glucose inhibited division protein A CAY59_00545 PF02527 rRNA small subunit methyltransferase G CAY59_00555 PF02195 ParB-like nuclease domain CAY59_00555 PF17762 HTH domain found in ParB protein CAY59_00560 PF03899 ATP synthase I chain CAY59_00565 PF00119 ATP synthase A chain CAY59_00570 PF00137 ATP synthase subunit C CAY59_00575 PF00430 ATP synthase B/B' CF(0) CAY59_00580 PF00213 ATP synthase delta (OSCP) subunit CAY59_00585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_00585 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAY59_00585 PF00306 ATP synthase alpha/beta chain, C terminal domain CAY59_00590 PF00231 ATP synthase CAY59_00595 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAY59_00595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_00600 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CAY59_00600 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CAY59_00605 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_00605 PF12804 MobA-like NTP transferase domain CAY59_00610 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_00615 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_00620 PF07690 Major Facilitator Superfamily CAY59_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_00625 PF03466 LysR substrate binding domain CAY59_00630 PF00990 Diguanylate cyclase, GGDEF domain CAY59_00635 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_00635 PF00585 C-terminal regulatory domain of Threonine dehydratase CAY59_00640 PF00920 Dehydratase family CAY59_00645 PF01063 Amino-transferase class IV CAY59_00655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAY59_00655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAY59_00655 PF00205 Thiamine pyrophosphate enzyme, central domain CAY59_00660 PF01078 Magnesium chelatase, subunit ChlI CAY59_00660 PF13335 Magnesium chelatase, subunit ChlI C-terminal CAY59_00680 PF00589 Phage integrase family CAY59_00680 PF02899 Phage integrase, N-terminal SAM-like domain CAY59_00685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CAY59_00685 PF11867 Domain of unknown function (DUF3387) CAY59_00685 PF18766 SWI2/SNF2 ATPase CAY59_00690 PF01420 Type I restriction modification DNA specificity domain CAY59_00695 PF02384 N-6 DNA Methylase CAY59_00725 PF01078 Magnesium chelatase, subunit ChlI CAY59_00725 PF13335 Magnesium chelatase, subunit ChlI C-terminal CAY59_00730 PF17152 Periplasmic sensor domain CAY59_00730 PF00990 Diguanylate cyclase, GGDEF domain CAY59_00740 PF01553 Acyltransferase CAY59_00745 PF01323 DSBA-like thioredoxin domain CAY59_00750 PF01636 Phosphotransferase enzyme family CAY59_00755 PF12801 4Fe-4S binding domain CAY59_00755 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CAY59_00755 PF13746 4Fe-4S dicluster domain CAY59_00760 PF06288 Protein of unknown function (DUF1040) CAY59_00765 PF07070 SpoOM protein CAY59_00770 PF03006 Haemolysin-III related CAY59_00780 PF02386 Cation transport protein CAY59_00785 PF02254 TrkA-N domain CAY59_00785 PF02080 TrkA-C domain CAY59_00790 PF01029 NusB family CAY59_00790 PF01189 16S rRNA methyltransferase RsmB/F CAY59_00795 PF00551 Formyl transferase CAY59_00795 PF02911 Formyl transferase, C-terminal domain CAY59_00800 PF01327 Polypeptide deformylase CAY59_00810 PF02481 DNA recombination-mediator protein A CAY59_00810 PF17782 DprA winged helix domain CAY59_00815 PF04361 Protein of unknown function (DUF494) CAY59_00820 PF01396 Topoisomerase DNA binding C4 zinc finger CAY59_00825 PF02222 ATP-grasp domain CAY59_00825 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CAY59_00830 PF00731 AIR carboxylase CAY59_00835 PF01300 Telomere recombination CAY59_00840 PF01218 Coproporphyrinogen III oxidase CAY59_00845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CAY59_00845 PF01488 Shikimate / quinate 5-dehydrogenase CAY59_00845 PF08501 Shikimate dehydrogenase substrate binding domain CAY59_00855 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_00900 PF00394 Multicopper oxidase CAY59_00900 PF07731 Multicopper oxidase CAY59_00900 PF07732 Multicopper oxidase CAY59_00905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CAY59_00915 PF02581 Thiamine monophosphate synthase CAY59_00920 PF00899 ThiF family CAY59_00925 PF02597 ThiS family CAY59_00930 PF05690 Thiazole biosynthesis protein ThiG CAY59_00935 PF06968 Biotin and Thiamin Synthesis associated domain CAY59_00935 PF04055 Radical SAM superfamily CAY59_00940 PF00557 Metallopeptidase family M24 CAY59_00940 PF01321 Creatinase/Prolidase N-terminal domain CAY59_00940 PF00557 Metallopeptidase family M24 CAY59_00940 PF01321 Creatinase/Prolidase N-terminal domain CAY59_00945 PF03466 LysR substrate binding domain CAY59_00945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_00950 PF07690 Major Facilitator Superfamily CAY59_00970 PF05114 Protein of unknown function (DUF692) CAY59_00980 PF00580 UvrD/REP helicase N-terminal domain CAY59_00980 PF13361 UvrD-like helicase C-terminal domain CAY59_00995 PF01810 LysE type translocator CAY59_01015 PF00892 EamA-like transporter family CAY59_01020 PF09382 RQC domain CAY59_01020 PF16124 RecQ zinc-binding CAY59_01020 PF00271 Helicase conserved C-terminal domain CAY59_01020 PF00270 DEAD/DEAH box helicase CAY59_01020 PF00570 HRDC domain CAY59_01030 PF02592 Putative vitamin uptake transporter CAY59_01035 PF02541 Ppx/GppA phosphatase family CAY59_01040 PF00271 Helicase conserved C-terminal domain CAY59_01040 PF00270 DEAD/DEAH box helicase CAY59_01045 PF00085 Thioredoxin CAY59_01050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_01050 PF07497 Rho termination factor, RNA-binding domain CAY59_01050 PF07498 Rho termination factor, N-terminal domain CAY59_01060 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CAY59_01065 PF00111 2Fe-2S iron-sulfur cluster binding domain CAY59_01070 PF00175 Oxidoreductase NAD-binding domain CAY59_01105 PF07219 HemY protein N-terminus CAY59_01110 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CAY59_01115 PF02602 Uroporphyrinogen-III synthase HemD CAY59_01120 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CAY59_01120 PF03900 Porphobilinogen deaminase, C-terminal domain CAY59_01125 PF12633 Adenylate cyclase NT domain CAY59_01125 PF01295 Adenylate cyclase, class-I CAY59_01130 PF01491 Frataxin-like domain CAY59_01140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAY59_01140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CAY59_01145 PF01678 Diaminopimelate epimerase CAY59_01155 PF02899 Phage integrase, N-terminal SAM-like domain CAY59_01155 PF00589 Phage integrase family CAY59_01160 PF13419 Haloacid dehalogenase-like hydrolase CAY59_01165 PF00990 Diguanylate cyclase, GGDEF domain CAY59_01165 PF00563 EAL domain CAY59_01165 PF08495 FIST N domain CAY59_01165 PF10442 FIST C domain CAY59_01190 PF12146 Serine aminopeptidase, S33 CAY59_01195 PF01810 LysE type translocator CAY59_01200 PF00563 EAL domain CAY59_01200 PF08668 HDOD domain CAY59_01205 PF01022 Bacterial regulatory protein, arsR family CAY59_01210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_01210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAY59_01235 PF10694 Protein of unknown function (DUF2500) CAY59_01265 PF01914 MarC family integral membrane protein CAY59_01280 PF00448 SRP54-type protein, GTPase domain CAY59_01280 PF02881 SRP54-type protein, helical bundle domain CAY59_01285 PF00005 ABC transporter CAY59_01290 PF18075 FtsX extracellular domain CAY59_01295 PF04545 Sigma-70, region 4 CAY59_01295 PF04542 Sigma-70 region 2 CAY59_01295 PF00140 Sigma-70 factor, region 1.2 CAY59_01305 PF00581 Rhodanese-like domain CAY59_01310 PF01694 Rhomboid family CAY59_01310 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CAY59_01315 PF03748 Flagellar basal body-associated protein FliL CAY59_01320 PF04345 Chorismate lyase CAY59_01325 PF01040 UbiA prenyltransferase family CAY59_01330 PF01553 Acyltransferase CAY59_01340 PF00717 Peptidase S24-like CAY59_01340 PF01726 LexA DNA binding domain CAY59_01350 PF01554 MatE CAY59_01355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_01355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_01360 PF00440 Bacterial regulatory proteins, tetR family CAY59_01370 PF05958 tRNA (Uracil-5-)-methyltransferase CAY59_01375 PF07715 TonB-dependent Receptor Plug Domain CAY59_01375 PF00593 TonB dependent receptor CAY59_01385 PF01177 Asp/Glu/Hydantoin racemase CAY59_01465 PF13091 PLD-like domain CAY59_01475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CAY59_01475 PF01565 FAD binding domain CAY59_01480 PF02237 Biotin protein ligase C terminal domain CAY59_01480 PF03099 Biotin/lipoate A/B protein ligase family CAY59_01480 PF08279 HTH domain CAY59_01485 PF00485 Phosphoribulokinase / Uridine kinase family CAY59_01515 PF03144 Elongation factor Tu domain 2 CAY59_01515 PF03143 Elongation factor Tu C-terminal domain CAY59_01515 PF00009 Elongation factor Tu GTP binding domain CAY59_01520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CAY59_01525 PF02357 Transcription termination factor nusG CAY59_01525 PF00467 KOW motif CAY59_01530 PF00298 Ribosomal protein L11, RNA binding domain CAY59_01530 PF03946 Ribosomal protein L11, N-terminal domain CAY59_01535 PF00687 Ribosomal protein L1p/L10e family CAY59_01540 PF00466 Ribosomal protein L10 CAY59_01545 PF16320 Ribosomal protein L7/L12 dimerisation domain CAY59_01545 PF00542 Ribosomal protein L7/L12 C-terminal domain CAY59_01550 PF00562 RNA polymerase Rpb2, domain 6 CAY59_01550 PF04563 RNA polymerase beta subunit CAY59_01550 PF04560 RNA polymerase Rpb2, domain 7 CAY59_01550 PF04565 RNA polymerase Rpb2, domain 3 CAY59_01550 PF04561 RNA polymerase Rpb2, domain 2 CAY59_01550 PF10385 RNA polymerase beta subunit external 1 domain CAY59_01555 PF04998 RNA polymerase Rpb1, domain 5 CAY59_01555 PF05000 RNA polymerase Rpb1, domain 4 CAY59_01555 PF04983 RNA polymerase Rpb1, domain 3 CAY59_01555 PF00623 RNA polymerase Rpb1, domain 2 CAY59_01555 PF04997 RNA polymerase Rpb1, domain 1 CAY59_01560 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CAY59_01565 PF00293 NUDIX domain CAY59_01565 PF09297 NADH pyrophosphatase zinc ribbon domain CAY59_01580 PF01208 Uroporphyrinogen decarboxylase (URO-D) CAY59_01585 PF03167 Uracil DNA glycosylase superfamily CAY59_01590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAY59_01595 PF04222 Protein of unknown function (DUF416) CAY59_01600 PF00571 CBS domain CAY59_01600 PF01595 Cyclin M transmembrane N-terminal domain CAY59_01605 PF00216 Bacterial DNA-binding protein CAY59_01615 PF02844 Phosphoribosylglycinamide synthetase, N domain CAY59_01615 PF02843 Phosphoribosylglycinamide synthetase, C domain CAY59_01615 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CAY59_01620 PF01808 AICARFT/IMPCHase bienzyme CAY59_01620 PF02142 MGS-like domain CAY59_01625 PF13411 MerR HTH family regulatory protein CAY59_01630 PF18500 CadC C-terminal domain 1 CAY59_01630 PF00486 Transcriptional regulatory protein, C terminal CAY59_01640 PF13520 Amino acid permease CAY59_01645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CAY59_01645 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CAY59_01645 PF01276 Orn/Lys/Arg decarboxylase, major domain CAY59_01690 PF05230 MASE2 domain CAY59_01690 PF00990 Diguanylate cyclase, GGDEF domain CAY59_01695 PF02954 Bacterial regulatory protein, Fis family CAY59_01700 PF01207 Dihydrouridine synthase (Dus) CAY59_01710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAY59_01710 PF00289 Biotin carboxylase, N-terminal domain CAY59_01710 PF02785 Biotin carboxylase C-terminal domain CAY59_01715 PF00364 Biotin-requiring enzyme CAY59_01720 PF01220 Dehydroquinase class II CAY59_01725 PF13193 AMP-binding enzyme C-terminal domain CAY59_01725 PF00501 AMP-binding enzyme CAY59_01725 PF16177 Acetyl-coenzyme A synthetase N-terminus CAY59_01740 PF12832 MFS_1 like family CAY59_01745 PF01627 Hpt domain CAY59_01745 PF00672 HAMP domain CAY59_01745 PF00512 His Kinase A (phospho-acceptor) domain CAY59_01745 PF00072 Response regulator receiver domain CAY59_01745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_01750 PF00206 Lyase CAY59_01750 PF10415 Fumarase C C-terminus CAY59_01765 PF00474 Sodium:solute symporter family CAY59_01775 PF01914 MarC family integral membrane protein CAY59_01780 PF00196 Bacterial regulatory proteins, luxR family CAY59_01780 PF00072 Response regulator receiver domain CAY59_01790 PF03605 Anaerobic c4-dicarboxylate membrane transporter CAY59_01795 PF00206 Lyase CAY59_01795 PF10415 Fumarase C C-terminus CAY59_01800 PF04186 FxsA cytoplasmic membrane protein CAY59_01805 PF00588 SpoU rRNA Methylase family CAY59_01810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAY59_01810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAY59_01815 PF16527 Two-component sensor protein CpxA, periplasmic domain CAY59_01815 PF00672 HAMP domain CAY59_01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_01815 PF00512 His Kinase A (phospho-acceptor) domain CAY59_01820 PF00072 Response regulator receiver domain CAY59_01820 PF00486 Transcriptional regulatory protein, C terminal CAY59_01830 PF01545 Cation efflux family CAY59_01830 PF16916 Dimerisation domain of Zinc Transporter CAY59_01835 PF00365 Phosphofructokinase CAY59_01840 PF01554 MatE CAY59_01845 PF00166 Chaperonin 10 Kd subunit CAY59_01850 PF00118 TCP-1/cpn60 chaperonin family CAY59_01860 PF02308 MgtC family CAY59_01865 PF04055 Radical SAM superfamily CAY59_01870 PF01132 Elongation factor P (EF-P) OB domain CAY59_01870 PF09285 Elongation factor P, C-terminal CAY59_01870 PF08207 Elongation factor P (EF-P) KOW-like domain CAY59_01885 PF02313 Fumarate reductase subunit D CAY59_01890 PF02300 Fumarate reductase subunit C CAY59_01895 PF13085 2Fe-2S iron-sulfur cluster binding domain CAY59_01895 PF13183 4Fe-4S dicluster domain CAY59_01900 PF02910 Fumarate reductase flavoprotein C-term CAY59_01900 PF00890 FAD binding domain CAY59_01905 PF00152 tRNA synthetases class II (D, K and N) CAY59_01915 PF08360 QacR-like protein, C-terminal region CAY59_01915 PF00440 Bacterial regulatory proteins, tetR family CAY59_01925 PF01551 Peptidase family M23 CAY59_01930 PF06426 Serine acetyltransferase, N-terminal CAY59_01930 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_01935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CAY59_01935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CAY59_01940 PF02556 Preprotein translocase subunit SecB CAY59_01945 PF00581 Rhodanese-like domain CAY59_01950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CAY59_01950 PF01676 Metalloenzyme superfamily CAY59_01995 PF02796 Helix-turn-helix domain of resolvase CAY59_01995 PF00239 Resolvase, N terminal domain CAY59_02000 PF00939 Sodium:sulfate symporter transmembrane region CAY59_02005 PF02666 Phosphatidylserine decarboxylase CAY59_02010 PF03193 RsgA GTPase CAY59_02015 PF00929 Exonuclease CAY59_02085 PF08331 Domain of unknown function (DUF1730) CAY59_02090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CAY59_02095 PF01520 N-acetylmuramoyl-L-alanine amidase CAY59_02100 PF08676 MutL C terminal dimerisation domain CAY59_02100 PF01119 DNA mismatch repair protein, C-terminal domain CAY59_02110 PF17209 Hfq protein CAY59_02115 PF01926 50S ribosome-binding GTPase CAY59_02115 PF13167 GTP-binding GTPase N-terminal CAY59_02115 PF16360 GTP-binding GTPase Middle Region CAY59_02120 PF01145 SPFH domain / Band 7 family CAY59_02120 PF12221 Bacterial membrane protein N terminal CAY59_02125 PF01145 SPFH domain / Band 7 family CAY59_02130 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CAY59_02135 PF00709 Adenylosuccinate synthetase CAY59_02140 PF08238 Sel1 repeat CAY59_02145 PF00970 Oxidoreductase FAD-binding domain CAY59_02145 PF00175 Oxidoreductase NAD-binding domain CAY59_02145 PF00042 Globin CAY59_02150 PF02082 Transcriptional regulator CAY59_02155 PF00773 RNB domain CAY59_02155 PF08461 Ribonuclease R winged-helix domain CAY59_02155 PF00575 S1 RNA binding domain CAY59_02155 PF17876 Cold shock domain CAY59_02155 PF08206 Ribonuclease B OB domain CAY59_02160 PF00588 SpoU rRNA Methylase family CAY59_02160 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAY59_02165 PF13419 Haloacid dehalogenase-like hydrolase CAY59_02170 PF00579 tRNA synthetases class I (W and Y) CAY59_02185 PF00117 Glutamine amidotransferase class-I CAY59_02190 PF00202 Aminotransferase class-III CAY59_02195 PF04958 Arginine N-succinyltransferase beta subunit CAY59_02200 PF00171 Aldehyde dehydrogenase family CAY59_02210 PF00027 Cyclic nucleotide-binding domain CAY59_02210 PF13545 Crp-like helix-turn-helix domain CAY59_02215 PF00485 Phosphoribulokinase / Uridine kinase family CAY59_02220 PF06794 Uncharacterised protein family (UPF0270) CAY59_02225 PF00561 alpha/beta hydrolase fold CAY59_02235 PF12848 ABC transporter CAY59_02235 PF00005 ABC transporter CAY59_02240 PF02525 Flavodoxin-like fold CAY59_02245 PF00999 Sodium/hydrogen exchanger family CAY59_02245 PF02254 TrkA-N domain CAY59_02255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAY59_02260 PF01112 Asparaginase CAY59_02265 PF04102 SlyX CAY59_02275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAY59_02275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAY59_02280 PF08348 YheO-like PAS domain CAY59_02280 PF13309 HTH domain CAY59_02285 PF02635 DsrE/DsrF-like family CAY59_02290 PF02635 DsrE/DsrF-like family CAY59_02295 PF04077 DsrH like protein CAY59_02300 PF00164 Ribosomal protein S12/S23 CAY59_02305 PF00177 Ribosomal protein S7p/S5e CAY59_02310 PF03764 Elongation factor G, domain IV CAY59_02310 PF00679 Elongation factor G C-terminus CAY59_02310 PF14492 Elongation Factor G, domain II CAY59_02310 PF03144 Elongation factor Tu domain 2 CAY59_02310 PF00009 Elongation factor Tu GTP binding domain CAY59_02315 PF03143 Elongation factor Tu C-terminal domain CAY59_02315 PF03144 Elongation factor Tu domain 2 CAY59_02315 PF00009 Elongation factor Tu GTP binding domain CAY59_02320 PF04324 BFD-like [2Fe-2S] binding domain CAY59_02325 PF00210 Ferritin-like domain CAY59_02330 PF03949 Malic enzyme, NAD binding domain CAY59_02330 PF00390 Malic enzyme, N-terminal domain CAY59_02335 PF01340 Met Apo-repressor, MetJ CAY59_02340 PF01053 Cys/Met metabolism PLP-dependent enzyme CAY59_02345 PF00742 Homoserine dehydrogenase CAY59_02345 PF00696 Amino acid kinase family CAY59_02345 PF03447 Homoserine dehydrogenase, NAD binding domain CAY59_02350 PF02219 Methylenetetrahydrofolate reductase CAY59_02360 PF00311 Phosphoenolpyruvate carboxylase CAY59_02365 PF07687 Peptidase dimerisation domain CAY59_02365 PF01546 Peptidase family M20/M25/M40 CAY59_02370 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAY59_02370 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAY59_02375 PF00696 Amino acid kinase family CAY59_02380 PF00764 Arginosuccinate synthase CAY59_02385 PF14698 Argininosuccinate lyase C-terminal CAY59_02385 PF00583 Acetyltransferase (GNAT) family CAY59_02385 PF00206 Lyase CAY59_02395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_02400 PF08534 Redoxin CAY59_02400 PF00462 Glutaredoxin CAY59_02405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_02405 PF03466 LysR substrate binding domain CAY59_02410 PF00912 Transglycosylase CAY59_02410 PF00905 Penicillin binding protein transpeptidase domain CAY59_02410 PF17092 Penicillin-binding protein OB-like domain CAY59_02435 PF00263 Bacterial type II and III secretion system protein CAY59_02435 PF03958 Bacterial type II/III secretion system short domain CAY59_02435 PF07660 Secretin and TonB N terminus short domain CAY59_02435 PF11741 AMIN domain CAY59_02440 PF01202 Shikimate kinase CAY59_02445 PF01761 3-dehydroquinate synthase CAY59_02455 PF02086 D12 class N6 adenine-specific DNA methyltransferase CAY59_02460 PF00834 Ribulose-phosphate 3 epimerase family CAY59_02465 PF01250 Ribosomal protein S6 CAY59_02470 PF00436 Single-strand binding protein family CAY59_02475 PF01084 Ribosomal protein S18 CAY59_02480 PF01281 Ribosomal protein L9, N-terminal domain CAY59_02480 PF03948 Ribosomal protein L9, C-terminal domain CAY59_02490 PF03796 DnaB-like helicase C terminal domain CAY59_02490 PF00772 DnaB-like helicase N terminal domain CAY59_02495 PF01168 Alanine racemase, N-terminal domain CAY59_02495 PF00842 Alanine racemase, C-terminal domain CAY59_02505 PF01894 Uncharacterised protein family UPF0047 CAY59_02510 PF00342 Phosphoglucose isomerase CAY59_02520 PF01475 Ferric uptake regulator family CAY59_02525 PF01207 Dihydrouridine synthase (Dus) CAY59_02545 PF00175 Oxidoreductase NAD-binding domain CAY59_02545 PF00667 FAD binding domain CAY59_02545 PF00258 Flavodoxin CAY59_02550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAY59_02550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAY59_02555 PF01507 Phosphoadenosine phosphosulfate reductase family CAY59_02620 PF00696 Amino acid kinase family CAY59_02620 PF01842 ACT domain CAY59_02630 PF00266 Aminotransferase class-V CAY59_02640 PF00005 ABC transporter CAY59_02640 PF17760 UvrA interaction domain CAY59_02640 PF17755 UvrA DNA-binding domain CAY59_02645 PF00483 Nucleotidyl transferase CAY59_02650 PF00196 Bacterial regulatory proteins, luxR family CAY59_02655 PF00436 Single-strand binding protein family CAY59_02660 PF00563 EAL domain CAY59_02660 PF17157 Gammaproteobacterial periplasmic sensor domain CAY59_02660 PF00990 Diguanylate cyclase, GGDEF domain CAY59_02680 PF00263 Bacterial type II and III secretion system protein CAY59_02680 PF03958 Bacterial type II/III secretion system short domain CAY59_02685 PF01471 Putative peptidoglycan binding domain CAY59_02685 PF13401 AAA domain CAY59_02695 PF00437 Type II/IV secretion system protein CAY59_02695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAY59_02700 PF00482 Type II secretion system (T2SS), protein F CAY59_02710 PF07963 Prokaryotic N-terminal methylation motif CAY59_02710 PF00114 Pilin (bacterial filament) CAY59_02750 PF04085 rod shape-determining protein MreC CAY59_02755 PF04093 rod shape-determining protein MreD CAY59_02760 PF02545 Maf-like protein CAY59_02770 PF13116 Protein of unknown function CAY59_02770 PF13502 AsmA-like C-terminal region CAY59_02775 PF00795 Carbon-nitrogen hydrolase CAY59_02780 PF01523 Putative modulator of DNA gyrase CAY59_02785 PF13638 PIN domain CAY59_02785 PF02562 PhoH-like protein CAY59_02790 PF18337 RapA N-terminal Tudor like domain CAY59_02790 PF18339 RapA N-terminal Tudor like domain 1 CAY59_02790 PF12137 RNA polymerase recycling family C-terminal CAY59_02790 PF00176 SNF2 family N-terminal domain CAY59_02790 PF00271 Helicase conserved C-terminal domain CAY59_02800 PF00849 RNA pseudouridylate synthase CAY59_02805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAY59_02805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAY59_02810 PF04751 Protein of unknown function (DUF615) CAY59_02815 PF01523 Putative modulator of DNA gyrase CAY59_02820 PF00571 CBS domain CAY59_02820 PF01769 Divalent cation transporter CAY59_02820 PF03448 MgtE intracellular N domain CAY59_02825 PF00381 PTS HPr component phosphorylation site CAY59_02830 PF03668 P-loop ATPase protein family CAY59_02835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAY59_02840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CAY59_02845 PF04552 Sigma-54, DNA binding domain CAY59_02845 PF04963 Sigma-54 factor, core binding domain CAY59_02845 PF00309 Sigma-54 factor, Activator interacting domain (AID) CAY59_02855 PF03968 OstA-like protein CAY59_02865 PF01380 SIS domain CAY59_02865 PF00571 CBS domain CAY59_02870 PF01699 Sodium/calcium exchanger protein CAY59_02875 PF00005 ABC transporter CAY59_02880 PF02405 Permease MlaE CAY59_02885 PF02470 MlaD protein CAY59_02890 PF05494 MlaC protein CAY59_02900 PF01722 BolA-like protein CAY59_02905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAY59_02910 PF01553 Acyltransferase CAY59_02915 PF01042 Endoribonuclease L-PSP CAY59_02920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CAY59_02920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CAY59_02925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAY59_02925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAY59_02935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CAY59_02935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CAY59_02945 PF06877 Regulator of ribonuclease activity B CAY59_02955 PF00583 Acetyltransferase (GNAT) family CAY59_02965 PF08264 Anticodon-binding domain of tRNA CAY59_02965 PF00133 tRNA synthetases class I (I, L, M and V) CAY59_02965 PF10458 Valyl tRNA synthetase tRNA binding arm CAY59_02970 PF04364 DNA polymerase III chi subunit, HolC CAY59_02975 PF00883 Cytosol aminopeptidase family, catalytic domain CAY59_02975 PF02789 Cytosol aminopeptidase family, N-terminal domain CAY59_02980 PF03739 Lipopolysaccharide export system permease LptF/LptG CAY59_02985 PF03739 Lipopolysaccharide export system permease LptF/LptG CAY59_02995 PF00106 short chain dehydrogenase CAY59_03005 PF01522 Polysaccharide deacetylase CAY59_03010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAY59_03015 PF02378 Phosphotransferase system, EIIC CAY59_03020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CAY59_03040 PF00072 Response regulator receiver domain CAY59_03090 PF00171 Aldehyde dehydrogenase family CAY59_03120 PF17200 Single Cache domain 2 CAY59_03120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_03120 PF00672 HAMP domain CAY59_03160 PF01464 Transglycosylase SLT domain CAY59_03160 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CAY59_03165 PF04362 Bacterial Fe(2+) trafficking CAY59_03170 PF14815 NUDIX domain CAY59_03170 PF00633 Helix-hairpin-helix motif CAY59_03170 PF00730 HhH-GPD superfamily base excision DNA repair protein CAY59_03175 PF02390 Putative methyltransferase CAY59_03180 PF02086 D12 class N6 adenine-specific DNA methyltransferase CAY59_03185 PF04960 Glutaminase CAY59_03190 PF06969 HemN C-terminal domain CAY59_03190 PF04055 Radical SAM superfamily CAY59_03195 PF01725 Ham1 family CAY59_03205 PF02594 Uncharacterised ACR, YggU family COG1872 CAY59_03210 PF02325 YGGT family CAY59_03215 PF03807 NADP oxidoreductase coenzyme F420-dependent CAY59_03215 PF14748 Pyrroline-5-carboxylate reductase dimerisation CAY59_03220 PF01168 Alanine racemase, N-terminal domain CAY59_03225 PF00437 Type II/IV secretion system protein CAY59_03230 PF00437 Type II/IV secretion system protein CAY59_03235 PF03652 Holliday junction resolvase CAY59_03240 PF02622 Uncharacterized ACR, COG1678 CAY59_03245 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CAY59_03245 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CAY59_03250 PF04452 RNA methyltransferase CAY59_03255 PF04231 Endonuclease I CAY59_03260 PF17283 SprT-like zinc ribbon domain CAY59_03260 PF10263 SprT-like family CAY59_03270 PF02773 S-adenosylmethionine synthetase, C-terminal domain CAY59_03270 PF02772 S-adenosylmethionine synthetase, central domain CAY59_03270 PF00438 S-adenosylmethionine synthetase, N-terminal domain CAY59_03275 PF02780 Transketolase, C-terminal domain CAY59_03275 PF02779 Transketolase, pyrimidine binding domain CAY59_03275 PF00456 Transketolase, thiamine diphosphate binding domain CAY59_03285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_03285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAY59_03290 PF00162 Phosphoglycerate kinase CAY59_03295 PF01116 Fructose-bisphosphate aldolase class-II CAY59_03300 PF00924 Mechanosensitive ion channel CAY59_03300 PF05552 Conserved TM helix CAY59_03310 PF01810 LysE type translocator CAY59_03315 PF03466 LysR substrate binding domain CAY59_03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_03320 PF04402 Protein of unknown function (DUF541) CAY59_03325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAY59_03325 PF01842 ACT domain CAY59_03325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAY59_03330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CAY59_03335 PF01812 5-formyltetrahydrofolate cyclo-ligase family CAY59_03345 PF05164 Cell division protein ZapA CAY59_03350 PF03695 Uncharacterised protein family (UPF0149) CAY59_03355 PF01494 FAD binding domain CAY59_03360 PF01494 FAD binding domain CAY59_03380 PF03937 Flavinator of succinate dehydrogenase CAY59_03390 PF00890 FAD binding domain CAY59_03390 PF02910 Fumarate reductase flavoprotein C-term CAY59_03395 PF08281 Sigma-70, region 4 CAY59_03395 PF04542 Sigma-70 region 2 CAY59_03400 PF03872 Anti sigma-E protein RseA, N-terminal domain CAY59_03400 PF03873 Anti sigma-E protein RseA, C-terminal domain CAY59_03405 PF03888 MucB/RseB N-terminal domain CAY59_03405 PF17188 MucB/RseB C-terminal domain CAY59_03415 PF00679 Elongation factor G C-terminus CAY59_03415 PF06421 GTP-binding protein LepA C-terminus CAY59_03415 PF00009 Elongation factor Tu GTP binding domain CAY59_03415 PF03144 Elongation factor Tu domain 2 CAY59_03420 PF10502 Signal peptidase, peptidase S26 CAY59_03425 PF14622 Ribonuclease-III-like CAY59_03425 PF00035 Double-stranded RNA binding motif CAY59_03430 PF07650 KH domain CAY59_03430 PF01926 50S ribosome-binding GTPase CAY59_03435 PF02565 Recombination protein O C terminal CAY59_03435 PF11967 Recombination protein O N terminal CAY59_03440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CAY59_03445 PF01648 4'-phosphopantetheinyl transferase superfamily CAY59_03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_03450 PF00072 Response regulator receiver domain CAY59_03450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAY59_03450 PF01627 Hpt domain CAY59_03450 PF00672 HAMP domain CAY59_03450 PF00512 His Kinase A (phospho-acceptor) domain CAY59_03460 PF01938 TRAM domain CAY59_03460 PF05958 tRNA (Uracil-5-)-methyltransferase CAY59_03465 PF04607 Region found in RelA / SpoT proteins CAY59_03465 PF13291 ACT domain CAY59_03465 PF02824 TGS domain CAY59_03470 PF03819 MazG nucleotide pyrophosphohydrolase domain CAY59_03475 PF06418 CTP synthase N-terminus CAY59_03475 PF00117 Glutamine amidotransferase class-I CAY59_03480 PF00113 Enolase, C-terminal TIM barrel domain CAY59_03480 PF03952 Enolase, N-terminal domain CAY59_03490 PF04977 Septum formation initiator CAY59_03495 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CAY59_03500 PF02542 YgbB family CAY59_03505 PF01142 tRNA pseudouridine synthase D (TruD) CAY59_03510 PF01975 Survival protein SurE CAY59_03520 PF01476 LysM domain CAY59_03520 PF01551 Peptidase family M23 CAY59_03525 PF00140 Sigma-70 factor, region 1.2 CAY59_03525 PF04542 Sigma-70 region 2 CAY59_03525 PF04545 Sigma-70, region 4 CAY59_03525 PF04539 Sigma-70 region 3 CAY59_03530 PF00488 MutS domain V CAY59_03530 PF01624 MutS domain I CAY59_03530 PF05192 MutS domain III CAY59_03530 PF05190 MutS family domain IV CAY59_03530 PF05188 MutS domain II CAY59_03535 PF02464 Competence-damaged protein CAY59_03540 PF00154 recA bacterial DNA recombination protein CAY59_03545 PF02631 RecX family CAY59_03550 PF02272 DHHA1 domain CAY59_03550 PF01411 tRNA synthetases class II (A) CAY59_03550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAY59_03555 PF13840 ACT domain CAY59_03555 PF00696 Amino acid kinase family CAY59_03555 PF01842 ACT domain CAY59_03560 PF02599 Global regulator protein family CAY59_03615 PF04277 Oxaloacetate decarboxylase, gamma chain CAY59_03620 PF02436 Conserved carboxylase domain CAY59_03620 PF00364 Biotin-requiring enzyme CAY59_03620 PF00682 HMGL-like CAY59_03625 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CAY59_03635 PF09335 SNARE associated Golgi protein CAY59_03640 PF00675 Insulinase (Peptidase family M16) CAY59_03640 PF05193 Peptidase M16 inactive domain CAY59_03645 PF04262 Glutamate-cysteine ligase CAY59_03655 PF02664 S-Ribosylhomocysteinase (LuxS) CAY59_03660 PF03471 Transporter associated domain CAY59_03660 PF00571 CBS domain CAY59_03660 PF01595 Cyclin M transmembrane N-terminal domain CAY59_03665 PF01578 Cytochrome C assembly protein CAY59_03670 PF02881 SRP54-type protein, helical bundle domain CAY59_03670 PF02978 Signal peptide binding domain CAY59_03670 PF00448 SRP54-type protein, GTPase domain CAY59_03675 PF00886 Ribosomal protein S16 CAY59_03680 PF01782 RimM N-terminal domain CAY59_03680 PF05239 PRC-barrel domain CAY59_03685 PF01746 tRNA (Guanine-1)-methyltransferase CAY59_03690 PF01245 Ribosomal protein L19 CAY59_03700 PF03884 DNA gyrase inhibitor YacG CAY59_03705 PF07072 Cell division protein CAY59_03710 PF01121 Dephospho-CoA kinase CAY59_03715 PF06750 Bacterial Peptidase A24 N-terminal domain CAY59_03715 PF01478 Type IV leader peptidase family CAY59_03725 PF00437 Type II/IV secretion system protein CAY59_03725 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CAY59_03730 PF00114 Pilin (bacterial filament) CAY59_03730 PF07963 Prokaryotic N-terminal methylation motif CAY59_03740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CAY59_03740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CAY59_03745 PF01510 N-acetylmuramoyl-L-alanine amidase CAY59_03750 PF07729 FCD domain CAY59_03750 PF00392 Bacterial regulatory proteins, gntR family CAY59_03755 PF17831 Pyruvate dehydrogenase E1 component middle domain CAY59_03755 PF00456 Transketolase, thiamine diphosphate binding domain CAY59_03760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAY59_03760 PF00364 Biotin-requiring enzyme CAY59_03760 PF02817 e3 binding domain CAY59_03765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_03765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_03770 PF00440 Bacterial regulatory proteins, tetR family CAY59_03775 PF00156 Phosphoribosyl transferase domain CAY59_03780 PF00484 Carbonic anhydrase CAY59_03785 PF00916 Sulfate permease family CAY59_03785 PF01740 STAS domain CAY59_03790 PF00005 ABC transporter CAY59_03795 PF01061 ABC-2 type transporter CAY59_03800 PF03279 Bacterial lipid A biosynthesis acyltransferase CAY59_03805 PF02569 Pantoate-beta-alanine ligase CAY59_03810 PF02548 Ketopantoate hydroxymethyltransferase CAY59_03815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAY59_03820 PF01743 Poly A polymerase head domain CAY59_03820 PF12626 Polymerase A arginine-rich C-terminus CAY59_03820 PF12627 Probable RNA and SrmB- binding site of polymerase A CAY59_03825 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAY59_03830 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAY59_03835 PF03749 Sugar fermentation stimulation protein RE domain CAY59_03835 PF17746 SfsA N-terminal OB domain CAY59_03840 PF00271 Helicase conserved C-terminal domain CAY59_03840 PF00270 DEAD/DEAH box helicase CAY59_03840 PF08482 ATP-dependent helicase C-terminal CAY59_03840 PF04408 Helicase associated domain (HA2) CAY59_03845 PF00912 Transglycosylase CAY59_03845 PF00905 Penicillin binding protein transpeptidase domain CAY59_03845 PF14814 Bifunctional transglycosylase second domain CAY59_03850 PF01734 Patatin-like phospholipase CAY59_03855 PF11791 Aconitate B N-terminal domain CAY59_03855 PF00330 Aconitase family (aconitate hydratase) CAY59_03855 PF06434 Aconitate hydratase 2 N-terminus CAY59_03860 PF06062 Uncharacterised protein family (UPF0231) CAY59_03865 PF00543 Nitrogen regulatory protein P-II CAY59_03870 PF00909 Ammonium Transporter Family CAY59_03875 PF13416 Bacterial extracellular solute-binding protein CAY59_03885 PF08402 TOBE domain CAY59_03885 PF00005 ABC transporter CAY59_03890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAY59_03890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAY59_03890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAY59_03890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAY59_03895 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CAY59_03895 PF06165 Glycosyltransferase family 36 CAY59_03900 PF00728 Glycosyl hydrolase family 20, catalytic domain CAY59_03900 PF02838 Glycosyl hydrolase family 20, domain 2 CAY59_03905 PF01869 BadF/BadG/BcrA/BcrD ATPase family CAY59_03915 PF00005 ABC transporter CAY59_03915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_03920 PF00005 ABC transporter CAY59_03920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_03925 PF12911 N-terminal TM domain of oligopeptide transport permease C CAY59_03925 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_03930 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_03935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_03950 PF05175 Methyltransferase small domain CAY59_03950 PF08468 Methyltransferase small domain N-terminal CAY59_03955 PF01594 AI-2E family transporter CAY59_03970 PF01521 Iron-sulphur cluster biosynthesis CAY59_03975 PF13533 Biotin-lipoyl like CAY59_03980 PF00873 AcrB/AcrD/AcrF family CAY59_03985 PF01551 Peptidase family M23 CAY59_03985 PF01476 LysM domain CAY59_03985 PF08525 Opacity-associated protein A N-terminal motif CAY59_03990 PF00579 tRNA synthetases class I (W and Y) CAY59_04005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CAY59_04010 PF13609 Gram-negative porin CAY59_04015 PF01272 Transcription elongation factor, GreA/GreB, C-term CAY59_04015 PF03449 Transcription elongation factor, N-terminal CAY59_04020 PF01985 CRS1 / YhbY (CRM) domain CAY59_04025 PF01728 FtsJ-like methyltransferase CAY59_04030 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_04030 PF17862 AAA+ lid domain CAY59_04030 PF01434 Peptidase family M41 CAY59_04030 PF06480 FtsH Extracellular CAY59_04035 PF00809 Pterin binding enzyme CAY59_04040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAY59_04040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAY59_04040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAY59_04040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAY59_04050 PF03840 Preprotein translocase SecG subunit CAY59_04065 PF17384 RimP C-terminal SH3 domain CAY59_04065 PF02576 RimP N-terminal domain CAY59_04070 PF00575 S1 RNA binding domain CAY59_04070 PF08529 NusA N-terminal domain CAY59_04070 PF13184 NusA-like KH domain CAY59_04075 PF00009 Elongation factor Tu GTP binding domain CAY59_04075 PF11987 Translation-initiation factor 2 CAY59_04075 PF08364 Bacterial translation initiation factor IF-2 associated region CAY59_04075 PF04760 Translation initiation factor IF-2, N-terminal region CAY59_04080 PF02033 Ribosome-binding factor A CAY59_04085 PF09157 Pseudouridine synthase II TruB, C-terminal CAY59_04085 PF16198 tRNA pseudouridylate synthase B C-terminal domain CAY59_04085 PF01509 TruB family pseudouridylate synthase (N terminal domain) CAY59_04090 PF00312 Ribosomal protein S15 CAY59_04095 PF01138 3' exoribonuclease family, domain 1 CAY59_04095 PF00575 S1 RNA binding domain CAY59_04095 PF03725 3' exoribonuclease family, domain 2 CAY59_04095 PF00013 KH domain CAY59_04095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CAY59_04100 PF13181 Tetratricopeptide repeat CAY59_04100 PF07719 Tetratricopeptide repeat CAY59_04110 PF01554 MatE CAY59_04125 PF03707 Bacterial signalling protein N terminal repeat CAY59_04125 PF00990 Diguanylate cyclase, GGDEF domain CAY59_04125 PF00563 EAL domain CAY59_04135 PF13508 Acetyltransferase (GNAT) domain CAY59_04155 PF05230 MASE2 domain CAY59_04155 PF00990 Diguanylate cyclase, GGDEF domain CAY59_04160 PF00009 Elongation factor Tu GTP binding domain CAY59_04160 PF03144 Elongation factor Tu domain 2 CAY59_04160 PF16658 Class II release factor RF3, C-terminal domain CAY59_04165 PF01026 TatD related DNase CAY59_04170 PF01773 Na+ dependent nucleoside transporter N-terminus CAY59_04170 PF07670 Nucleoside recognition CAY59_04170 PF07662 Na+ dependent nucleoside transporter C-terminus CAY59_04175 PF01791 DeoC/LacD family aldolase CAY59_04180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CAY59_04180 PF00591 Glycosyl transferase family, a/b domain CAY59_04180 PF02885 Glycosyl transferase family, helical bundle domain CAY59_04185 PF01676 Metalloenzyme superfamily CAY59_04190 PF01048 Phosphorylase superfamily CAY59_04200 PF18429 Domain of unknown function (DUF5609) CAY59_04210 PF18073 Rubredoxin metal binding domain CAY59_04215 PF00679 Elongation factor G C-terminus CAY59_04215 PF14492 Elongation Factor G, domain II CAY59_04215 PF03144 Elongation factor Tu domain 2 CAY59_04215 PF03764 Elongation factor G, domain IV CAY59_04215 PF00009 Elongation factor Tu GTP binding domain CAY59_04245 PF00501 AMP-binding enzyme CAY59_04250 PF12833 Helix-turn-helix domain CAY59_04250 PF02805 Metal binding domain of Ada CAY59_04270 PF13629 Pilus formation protein N terminal region CAY59_04270 PF00263 Bacterial type II and III secretion system protein CAY59_04270 PF04972 BON domain CAY59_04300 PF00437 Type II/IV secretion system protein CAY59_04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_04330 PF03466 LysR substrate binding domain CAY59_04335 PF01204 Trehalase CAY59_04345 PF13520 Amino acid permease CAY59_04350 PF04074 YhcH/YjgK/YiaL CAY59_04355 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAY59_04355 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CAY59_04355 PF00703 Glycosyl hydrolases family 2 CAY59_04355 PF16353 Domain of unknown function(DUF4981) CAY59_04355 PF02929 Beta galactosidase small chain CAY59_04360 PF00356 Bacterial regulatory proteins, lacI family CAY59_04365 PF03717 Penicillin-binding Protein dimerisation domain CAY59_04365 PF00905 Penicillin binding protein transpeptidase domain CAY59_04370 PF16363 GDP-mannose 4,6 dehydratase CAY59_04375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CAY59_04375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CAY59_04380 PF10509 Galactokinase galactose-binding signature CAY59_04380 PF08544 GHMP kinases C terminal CAY59_04380 PF00288 GHMP kinases N terminal domain CAY59_04385 PF01263 Aldose 1-epimerase CAY59_04390 PF00356 Bacterial regulatory proteins, lacI family CAY59_04395 PF00367 phosphotransferase system, EIIB CAY59_04395 PF02378 Phosphotransferase system, EIIC CAY59_04405 PF01588 Putative tRNA binding domain CAY59_04425 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CAY59_04425 PF01464 Transglycosylase SLT domain CAY59_04430 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CAY59_04430 PF01266 FAD dependent oxidoreductase CAY59_04435 PF00455 DeoR C terminal sensor domain CAY59_04435 PF08220 DeoR-like helix-turn-helix domain CAY59_04440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CAY59_04440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CAY59_04450 PF07690 Major Facilitator Superfamily CAY59_04455 PF03009 Glycerophosphoryl diester phosphodiesterase family CAY59_04470 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CAY59_04470 PF14602 Hexapeptide repeat of succinyl-transferase CAY59_04485 PF07130 YebG protein CAY59_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_04490 PF03466 LysR substrate binding domain CAY59_04500 PF00884 Sulfatase CAY59_04500 PF11893 Domain of unknown function (DUF3413) CAY59_04505 PF17946 RecC C-terminal domain CAY59_04510 PF12705 PD-(D/E)XK nuclease superfamily CAY59_04510 PF00580 UvrD/REP helicase N-terminal domain CAY59_04510 PF13361 UvrD-like helicase C-terminal domain CAY59_04515 PF13538 UvrD-like helicase C-terminal domain CAY59_04535 PF00583 Acetyltransferase (GNAT) family CAY59_04535 PF00696 Amino acid kinase family CAY59_04550 PF03562 MltA specific insert domain CAY59_04550 PF06725 3D domain CAY59_04555 PF00899 ThiF family CAY59_04560 PF02657 Fe-S metabolism associated domain CAY59_04565 PF00266 Aminotransferase class-V CAY59_04570 PF01965 DJ-1/PfpI family CAY59_04575 PF08546 Ketopantoate reductase PanE/ApbA C terminal CAY59_04575 PF02558 Ketopantoate reductase PanE/ApbA CAY59_04580 PF03502 Nucleoside-specific channel-forming protein, Tsx CAY59_04595 PF04545 Sigma-70, region 4 CAY59_04595 PF04542 Sigma-70 region 2 CAY59_04605 PF07690 Major Facilitator Superfamily CAY59_04610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAY59_04620 PF05175 Methyltransferase small domain CAY59_04625 PF01722 BolA-like protein CAY59_04630 PF11973 NQRA C-terminal domain CAY59_04630 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CAY59_04635 PF03116 NQR2, RnfD, RnfE family CAY59_04640 PF04205 FMN-binding domain CAY59_04645 PF02508 Rnf-Nqr subunit, membrane protein CAY59_04650 PF02508 Rnf-Nqr subunit, membrane protein CAY59_04655 PF00175 Oxidoreductase NAD-binding domain CAY59_04655 PF00111 2Fe-2S iron-sulfur cluster binding domain CAY59_04655 PF00970 Oxidoreductase FAD-binding domain CAY59_04660 PF02424 ApbE family CAY59_04670 PF00990 Diguanylate cyclase, GGDEF domain CAY59_04670 PF00072 Response regulator receiver domain CAY59_04680 PF00270 DEAD/DEAH box helicase CAY59_04680 PF00271 Helicase conserved C-terminal domain CAY59_04680 PF00570 HRDC domain CAY59_04680 PF16124 RecQ zinc-binding CAY59_04680 PF09382 RQC domain CAY59_04685 PF01272 Transcription elongation factor, GreA/GreB, C-term CAY59_04685 PF03449 Transcription elongation factor, N-terminal CAY59_04695 PF00704 Glycosyl hydrolases family 18 CAY59_04695 PF00041 Fibronectin type III domain CAY59_04700 PF00209 Sodium:neurotransmitter symporter family CAY59_04710 PF06786 Uncharacterised protein family (UPF0253) CAY59_04720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAY59_04720 PF04073 Aminoacyl-tRNA editing domain CAY59_04720 PF03129 Anticodon binding domain CAY59_04725 PF18389 TrmO C-terminal domain CAY59_04725 PF01980 tRNA-methyltransferase O CAY59_04730 PF01197 Ribosomal protein L31 CAY59_04735 PF00444 Ribosomal protein L36 CAY59_04740 PF03806 AbgT putative transporter family CAY59_04745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CAY59_04775 PF04287 tRNA pseudouridine synthase C CAY59_04780 PF00849 RNA pseudouridylate synthase CAY59_04785 PF11944 Protein of unknown function (DUF3461) CAY59_04790 PF01909 Nucleotidyltransferase domain CAY59_04790 PF01966 HD domain CAY59_04790 PF08335 GlnD PII-uridylyltransferase CAY59_04790 PF01842 ACT domain CAY59_04795 PF00557 Metallopeptidase family M24 CAY59_04800 PF00318 Ribosomal protein S2 CAY59_04805 PF00889 Elongation factor TS CAY59_04810 PF00696 Amino acid kinase family CAY59_04815 PF01765 Ribosome recycling factor CAY59_04820 PF01255 Putative undecaprenyl diphosphate synthase CAY59_04830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAY59_04830 PF13288 DXP reductoisomerase C-terminal domain CAY59_04830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CAY59_04835 PF17820 PDZ domain CAY59_04835 PF02163 Peptidase family M50 CAY59_04840 PF07244 Surface antigen variable number repeat CAY59_04840 PF01103 Surface antigen CAY59_04845 PF03938 Outer membrane protein (OmpH-like) CAY59_04850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CAY59_04850 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_04855 PF07977 FabA-like domain CAY59_04860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CAY59_04860 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_04865 PF02684 Lipid-A-disaccharide synthetase CAY59_04870 PF01351 Ribonuclease HII CAY59_04875 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAY59_04875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAY59_04875 PF01336 OB-fold nucleic acid binding domain CAY59_04875 PF02811 PHP domain CAY59_04875 PF14579 Helix-hairpin-helix motif CAY59_04880 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CAY59_04885 PF01171 PP-loop family CAY59_04885 PF11734 TilS substrate C-terminal domain CAY59_04885 PF09179 TilS substrate binding domain CAY59_04890 PF00034 Cytochrome c CAY59_04895 PF00543 Nitrogen regulatory protein P-II CAY59_04910 PF01464 Transglycosylase SLT domain CAY59_04910 PF01476 LysM domain CAY59_04915 PF16123 Hydroxyacylglutathione hydrolase C-terminus CAY59_04920 PF08241 Methyltransferase domain CAY59_04925 PF00075 RNase H CAY59_04930 PF00929 Exonuclease CAY59_04950 PF11008 Protein of unknown function (DUF2846) CAY59_04960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAY59_04960 PF09317 Domain of unknown function (DUF1974) CAY59_04960 PF02770 Acyl-CoA dehydrogenase, middle domain CAY59_04960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAY59_04965 PF13580 SIS domain CAY59_04970 PF13230 Glutamine amidotransferases class-II CAY59_04975 PF00551 Formyl transferase CAY59_04980 PF00586 AIR synthase related protein, N-terminal domain CAY59_04980 PF02769 AIR synthase related protein, C-terminal domain CAY59_04990 PF00860 Permease family CAY59_05005 PF03358 NADPH-dependent FMN reductase CAY59_05010 PF03960 ArsC family CAY59_05015 PF13181 Tetratricopeptide repeat CAY59_05015 PF01435 Peptidase family M48 CAY59_05025 PF01594 AI-2E family transporter CAY59_05030 PF00578 AhpC/TSA family CAY59_05035 PF01842 ACT domain CAY59_05040 PF00701 Dihydrodipicolinate synthetase family CAY59_05060 PF01546 Peptidase family M20/M25/M40 CAY59_05060 PF07687 Peptidase dimerisation domain CAY59_05065 PF03960 ArsC family CAY59_05090 PF11143 Protein of unknown function (DUF2919) CAY59_05095 PF04261 Dyp-type peroxidase family CAY59_05100 PF12833 Helix-turn-helix domain CAY59_05105 PF02056 Family 4 glycosyl hydrolase CAY59_05105 PF11975 Family 4 glycosyl hydrolase C-terminal domain CAY59_05120 PF00669 Bacterial flagellin N-terminal helical region CAY59_05120 PF00700 Bacterial flagellin C-terminal helical region CAY59_05120 PF07196 Flagellin hook IN motif CAY59_05130 PF00700 Bacterial flagellin C-terminal helical region CAY59_05130 PF07196 Flagellin hook IN motif CAY59_05130 PF00669 Bacterial flagellin N-terminal helical region CAY59_05135 PF00669 Bacterial flagellin N-terminal helical region CAY59_05135 PF07196 Flagellin hook IN motif CAY59_05135 PF00700 Bacterial flagellin C-terminal helical region CAY59_05140 PF03646 FlaG protein CAY59_05145 PF02465 Flagellar hook-associated protein 2 N-terminus CAY59_05145 PF07195 Flagellar hook-associated protein 2 C-terminus CAY59_05145 PF07196 Flagellin hook IN motif CAY59_05155 PF02561 Flagellar protein FliS CAY59_05160 PF00072 Response regulator receiver domain CAY59_05160 PF02954 Bacterial regulatory protein, Fis family CAY59_05160 PF00158 Sigma-54 interaction domain CAY59_05165 PF00512 His Kinase A (phospho-acceptor) domain CAY59_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_05170 PF00158 Sigma-54 interaction domain CAY59_05170 PF02954 Bacterial regulatory protein, Fis family CAY59_05170 PF00072 Response regulator receiver domain CAY59_05175 PF02049 Flagellar hook-basal body complex protein FliE CAY59_05180 PF08345 Flagellar M-ring protein C-terminal CAY59_05180 PF01514 Secretory protein of YscJ/FliF family CAY59_05185 PF14842 FliG N-terminal domain CAY59_05185 PF14841 FliG middle domain CAY59_05185 PF01706 FliG C-terminal domain CAY59_05220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAY59_05220 PF02154 Flagellar motor switch protein FliM CAY59_05225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAY59_05230 PF04347 Flagellar biosynthesis protein, FliO CAY59_05235 PF00813 FliP family CAY59_05240 PF01313 Bacterial export proteins, family 3 CAY59_05245 PF01311 Bacterial export proteins, family 1 CAY59_05250 PF01312 FlhB HrpN YscU SpaS Family CAY59_05255 PF00771 FHIPEP family CAY59_05260 PF00448 SRP54-type protein, GTPase domain CAY59_05265 PF10609 NUBPL iron-transfer P-loop NTPase CAY59_05270 PF04539 Sigma-70 region 3 CAY59_05270 PF04542 Sigma-70 region 2 CAY59_05270 PF04545 Sigma-70, region 4 CAY59_05275 PF00072 Response regulator receiver domain CAY59_05280 PF04344 Chemotaxis phosphatase, CheZ CAY59_05285 PF01627 Hpt domain CAY59_05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_05285 PF02895 Signal transducing histidine kinase, homodimeric domain CAY59_05285 PF07194 P2 response regulator binding domain CAY59_05285 PF01584 CheW-like domain CAY59_05290 PF01339 CheB methylesterase CAY59_05290 PF00072 Response regulator receiver domain CAY59_05295 PF13614 AAA domain CAY59_05305 PF01584 CheW-like domain CAY59_05315 PF00005 ABC transporter CAY59_05320 PF03379 CcmB protein CAY59_05325 PF01578 Cytochrome C assembly protein CAY59_05335 PF03100 CcmE CAY59_05340 PF01578 Cytochrome C assembly protein CAY59_05340 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CAY59_05345 PF08534 Redoxin CAY59_05350 PF03918 Cytochrome C biogenesis protein CAY59_05355 PF03918 Cytochrome C biogenesis protein CAY59_05360 PF04333 MlaA lipoprotein CAY59_05365 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAY59_05370 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAY59_05380 PF08281 Sigma-70, region 4 CAY59_05380 PF04542 Sigma-70 region 2 CAY59_05390 PF00108 Thiolase, N-terminal domain CAY59_05390 PF02803 Thiolase, C-terminal domain CAY59_05395 PF00378 Enoyl-CoA hydratase/isomerase CAY59_05395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CAY59_05395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAY59_05405 PF00675 Insulinase (Peptidase family M16) CAY59_05405 PF05193 Peptidase M16 inactive domain CAY59_05405 PF16187 Middle or third domain of peptidase_M16 CAY59_05410 PF00300 Histidine phosphatase superfamily (branch 1) CAY59_05415 PF01713 Smr domain CAY59_05420 PF05175 Methyltransferase small domain CAY59_05425 PF01264 Chorismate synthase CAY59_05430 PF03458 UPF0126 domain CAY59_05435 PF04315 Elongation factor P hydroxylase CAY59_05440 PF08891 YfcL protein CAY59_05455 PF01266 FAD dependent oxidoreductase CAY59_05455 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CAY59_05460 PF02801 Beta-ketoacyl synthase, C-terminal domain CAY59_05460 PF00109 Beta-ketoacyl synthase, N-terminal domain CAY59_05470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAY59_05470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAY59_05470 PF11890 Domain of unknown function (DUF3410) CAY59_05485 PF01416 tRNA pseudouridine synthase CAY59_05495 PF01039 Carboxyl transferase domain CAY59_05495 PF17848 Acetyl-coA carboxylase zinc finger domain CAY59_05500 PF08245 Mur ligase middle domain CAY59_05500 PF02875 Mur ligase family, glutamate ligase domain CAY59_05505 PF05036 Sporulation related domain CAY59_05510 PF02674 Colicin V production protein CAY59_05515 PF00156 Phosphoribosyl transferase domain CAY59_05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_05520 PF03466 LysR substrate binding domain CAY59_05530 PF04304 Protein of unknown function (DUF454) CAY59_05535 PF00156 Phosphoribosyl transferase domain CAY59_05540 PF12170 DNA polymerase III tau subunit V interacting with alpha CAY59_05540 PF12169 DNA polymerase III subunits gamma and tau domain III CAY59_05545 PF02575 YbaB/EbfC DNA-binding family CAY59_05550 PF13662 Toprim domain CAY59_05550 PF02132 RecR protein CAY59_05555 PF00230 Major intrinsic protein CAY59_05565 PF01042 Endoribonuclease L-PSP CAY59_05575 PF08348 YheO-like PAS domain CAY59_05575 PF13309 HTH domain CAY59_05580 PF03692 Putative zinc- or iron-chelating domain CAY59_05585 PF03692 Putative zinc- or iron-chelating domain CAY59_05590 PF04226 Transglycosylase associated protein CAY59_05595 PF06826 Predicted Permease Membrane Region CAY59_05600 PF00282 Pyridoxal-dependent decarboxylase conserved domain CAY59_05605 PF05552 Conserved TM helix CAY59_05605 PF00924 Mechanosensitive ion channel CAY59_05615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_05625 PF00245 Alkaline phosphatase CAY59_05630 PF02028 BCCT, betaine/carnitine/choline family transporter CAY59_05645 PF13847 Methyltransferase domain CAY59_05650 PF01156 Inosine-uridine preferring nucleoside hydrolase CAY59_05660 PF01263 Aldose 1-epimerase CAY59_05665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_05665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAY59_05680 PF07023 Protein of unknown function (DUF1315) CAY59_05685 PF00710 Asparaginase, N-terminal CAY59_05685 PF17763 Glutaminase/Asparaginase C-terminal domain CAY59_05690 PF01343 Peptidase family S49 CAY59_05695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAY59_05695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_05700 PF00881 Nitroreductase family CAY59_05705 PF01131 DNA topoisomerase CAY59_05705 PF01751 Toprim domain CAY59_05715 PF00106 short chain dehydrogenase CAY59_05720 PF00850 Histone deacetylase domain CAY59_05730 PF05987 Bacterial protein of unknown function (DUF898) CAY59_05745 PF00884 Sulfatase CAY59_05745 PF11893 Domain of unknown function (DUF3413) CAY59_05750 PF07208 Protein of unknown function (DUF1414) CAY59_05755 PF04245 37-kD nucleoid-associated bacterial protein CAY59_05770 PF03553 Na+/H+ antiporter family CAY59_05775 PF02774 Semialdehyde dehydrogenase, dimerisation domain CAY59_05775 PF01118 Semialdehyde dehydrogenase, NAD binding domain CAY59_05780 PF00027 Cyclic nucleotide-binding domain CAY59_05780 PF00520 Ion transport protein CAY59_05785 PF01914 MarC family integral membrane protein CAY59_05790 PF00171 Aldehyde dehydrogenase family CAY59_05790 PF00465 Iron-containing alcohol dehydrogenase CAY59_05805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CAY59_05805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CAY59_05810 PF00462 Glutaredoxin CAY59_05820 PF13726 Na+-H+ antiporter family CAY59_05820 PF03553 Na+/H+ antiporter family CAY59_05825 PF00929 Exonuclease CAY59_05830 PF00691 OmpA family CAY59_05830 PF18393 MotY N-terminal domain CAY59_05835 PF10952 Protein of unknown function (DUF2753) CAY59_05840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_05845 PF00730 HhH-GPD superfamily base excision DNA repair protein CAY59_05845 PF00633 Helix-hairpin-helix motif CAY59_05845 PF10576 Iron-sulfur binding domain of endonuclease III CAY59_05850 PF02508 Rnf-Nqr subunit, membrane protein CAY59_05855 PF04205 FMN-binding domain CAY59_05860 PF03116 NQR2, RnfD, RnfE family CAY59_05870 PF04060 Putative Fe-S cluster CAY59_05875 PF02508 Rnf-Nqr subunit, membrane protein CAY59_05880 PF01228 Glycine radical CAY59_05880 PF02901 Pyruvate formate lyase-like CAY59_05890 PF00486 Transcriptional regulatory protein, C terminal CAY59_05890 PF00072 Response regulator receiver domain CAY59_05900 PF03372 Endonuclease/Exonuclease/phosphatase family CAY59_05925 PF04851 Type III restriction enzyme, res subunit CAY59_05925 PF00271 Helicase conserved C-terminal domain CAY59_05925 PF12344 Ultra-violet resistance protein B CAY59_05925 PF17757 UvrB interaction domain CAY59_05925 PF02151 UvrB/uvrC motif CAY59_05930 PF00072 Response regulator receiver domain CAY59_05930 PF00158 Sigma-54 interaction domain CAY59_05930 PF02954 Bacterial regulatory protein, Fis family CAY59_05935 PF01627 Hpt domain CAY59_05940 PF01933 Uncharacterised protein family UPF0052 CAY59_05945 PF06463 Molybdenum Cofactor Synthesis C CAY59_05945 PF04055 Radical SAM superfamily CAY59_05950 PF00994 Probable molybdopterin binding domain CAY59_05955 PF01967 MoaC family CAY59_05960 PF02597 ThiS family CAY59_05965 PF02391 MoaE protein CAY59_05970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_05975 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_05980 PF12911 N-terminal TM domain of oligopeptide transport permease C CAY59_05980 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_05985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_05985 PF00005 ABC transporter CAY59_05990 PF00005 ABC transporter CAY59_05990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_05995 PF13409 Glutathione S-transferase, N-terminal domain CAY59_06000 PF13194 Domain of unknown function (DUF4010) CAY59_06005 PF07085 DRTGG domain CAY59_06005 PF01515 Phosphate acetyl/butaryl transferase CAY59_06010 PF00871 Acetokinase family CAY59_06015 PF04217 Protein of unknown function, DUF412 CAY59_06025 PF02653 Branched-chain amino acid transport system / permease component CAY59_06030 PF00005 ABC transporter CAY59_06035 PF02903 Alpha amylase, N-terminal ig-like domain CAY59_06035 PF00128 Alpha amylase, catalytic domain CAY59_06040 PF00990 Diguanylate cyclase, GGDEF domain CAY59_06040 PF00072 Response regulator receiver domain CAY59_06045 PF01207 Dihydrouridine synthase (Dus) CAY59_06050 PF07516 SecA Wing and Scaffold domain CAY59_06050 PF01043 SecA preprotein cross-linking domain CAY59_06050 PF07517 SecA DEAD-like domain CAY59_06050 PF02810 SEC-C motif CAY59_06055 PF02600 Disulfide bond formation protein DsbB CAY59_06060 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CAY59_06065 PF07840 FadR C-terminal domain CAY59_06065 PF00392 Bacterial regulatory proteins, gntR family CAY59_06075 PF01588 Putative tRNA binding domain CAY59_06075 PF09334 tRNA synthetases class I (M) CAY59_06080 PF10609 NUBPL iron-transfer P-loop NTPase CAY59_06085 PF00485 Phosphoribulokinase / Uridine kinase family CAY59_06095 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CAY59_06095 PF12557 Cob(I)alamin adenosyltransferase N terminal CAY59_06100 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAY59_06105 PF00916 Sulfate permease family CAY59_06105 PF01740 STAS domain CAY59_06115 PF00575 S1 RNA binding domain CAY59_06115 PF12111 Polyribonucleotide phosphorylase C terminal CAY59_06115 PF10150 Ribonuclease E/G family CAY59_06120 PF01479 S4 domain CAY59_06120 PF00849 RNA pseudouridylate synthase CAY59_06125 PF02545 Maf-like protein CAY59_06130 PF02620 Large ribosomal RNA subunit accumulation protein YceD CAY59_06135 PF01783 Ribosomal L32p protein family CAY59_06140 PF02504 Fatty acid synthesis protein CAY59_06145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAY59_06145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAY59_06150 PF00698 Acyl transferase domain CAY59_06160 PF00550 Phosphopantetheine attachment site CAY59_06165 PF02801 Beta-ketoacyl synthase, C-terminal domain CAY59_06165 PF00109 Beta-ketoacyl synthase, N-terminal domain CAY59_06170 PF01063 Amino-transferase class IV CAY59_06175 PF02618 YceG-like family CAY59_06180 PF02223 Thymidylate kinase CAY59_06185 PF09115 DNA polymerase III, delta subunit, C terminal CAY59_06190 PF01026 TatD related DNase CAY59_06195 PF02378 Phosphotransferase system, EIIC CAY59_06195 PF00367 phosphotransferase system, EIIB CAY59_06205 PF00209 Sodium:neurotransmitter symporter family CAY59_06215 PF01734 Patatin-like phospholipase CAY59_06220 PF07979 Intimin C-type lectin domain CAY59_06220 PF11924 Inverse autotransporter, beta-domain CAY59_06220 PF09134 Invasin, domain 3 CAY59_06220 PF02369 Bacterial Ig-like domain (group 1) CAY59_06240 PF00135 Carboxylesterase family CAY59_06250 PF18500 CadC C-terminal domain 1 CAY59_06250 PF00486 Transcriptional regulatory protein, C terminal CAY59_06260 PF00224 Pyruvate kinase, barrel domain CAY59_06260 PF02887 Pyruvate kinase, alpha/beta domain CAY59_06265 PF00480 ROK family CAY59_06270 PF00072 Response regulator receiver domain CAY59_06270 PF01584 CheW-like domain CAY59_06275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAY59_06275 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAY59_06275 PF01336 OB-fold nucleic acid binding domain CAY59_06275 PF14579 Helix-hairpin-helix motif CAY59_06275 PF02811 PHP domain CAY59_06290 PF00106 short chain dehydrogenase CAY59_06295 PF01343 Peptidase family S49 CAY59_06295 PF08496 Peptidase family S49 N-terminal CAY59_06300 PF02224 Cytidylate kinase CAY59_06315 PF06305 Lipopolysaccharide assembly protein A domain CAY59_06320 PF18073 Rubredoxin metal binding domain CAY59_06325 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CAY59_06350 PF03886 ABC-type transport auxiliary lipoprotein component CAY59_06355 PF02470 MlaD protein CAY59_06360 PF04403 Paraquat-inducible protein A CAY59_06365 PF00356 Bacterial regulatory proteins, lacI family CAY59_06380 PF02264 LamB porin CAY59_06390 PF16874 Glycosyl hydrolase family 36 C-terminal domain CAY59_06390 PF16875 Glycosyl hydrolase family 36 N-terminal domain CAY59_06400 PF01966 HD domain CAY59_06405 PF03466 LysR substrate binding domain CAY59_06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_06420 PF00085 Thioredoxin CAY59_06430 PF05958 tRNA (Uracil-5-)-methyltransferase CAY59_06430 PF01938 TRAM domain CAY59_06445 PF13302 Acetyltransferase (GNAT) domain CAY59_06465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_06475 PF02687 FtsX-like permease family CAY59_06475 PF12704 MacB-like periplasmic core domain CAY59_06485 PF00005 ABC transporter CAY59_06485 PF02687 FtsX-like permease family CAY59_06485 PF12704 MacB-like periplasmic core domain CAY59_06490 PF03543 Yersinia/Haemophilus virulence surface antigen CAY59_06500 PF02811 PHP domain CAY59_06500 PF00929 Exonuclease CAY59_06500 PF14579 Helix-hairpin-helix motif CAY59_06500 PF11490 DNA polymerase III polC-type N-terminus II CAY59_06500 PF07733 Bacterial DNA polymerase III alpha NTPase domain CAY59_06500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CAY59_06550 PF00529 HlyD membrane-fusion protein of T1SS CAY59_06550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_06555 PF03466 LysR substrate binding domain CAY59_06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_06590 PF00512 His Kinase A (phospho-acceptor) domain CAY59_06590 PF00672 HAMP domain CAY59_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_06595 PF00486 Transcriptional regulatory protein, C terminal CAY59_06595 PF00072 Response regulator receiver domain CAY59_06600 PF00535 Glycosyl transferase family 2 CAY59_06605 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CAY59_06615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_06615 PF00672 HAMP domain CAY59_06630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CAY59_06635 PF13309 HTH domain CAY59_06635 PF08348 YheO-like PAS domain CAY59_06640 PF01042 Endoribonuclease L-PSP CAY59_06645 PF00375 Sodium:dicarboxylate symporter family CAY59_06650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_06650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_06675 PF11842 Domain of unknown function (DUF3362) CAY59_06675 PF04055 Radical SAM superfamily CAY59_06675 PF08497 Radical SAM N-terminal CAY59_06680 PF00990 Diguanylate cyclase, GGDEF domain CAY59_06680 PF00498 FHA domain CAY59_06680 PF00563 EAL domain CAY59_06700 PF01717 Cobalamin-independent synthase, Catalytic domain CAY59_06700 PF08267 Cobalamin-independent synthase, N-terminal domain CAY59_06710 PF03795 YCII-related domain CAY59_06715 PF03061 Thioesterase superfamily CAY59_06720 PF04279 Intracellular septation protein A CAY59_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_06730 PF00072 Response regulator receiver domain CAY59_06735 PF17327 Acyl homoserine lactone synthase CAY59_06740 PF00375 Sodium:dicarboxylate symporter family CAY59_06745 PF00290 Tryptophan synthase alpha chain CAY59_06750 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_06755 PF00218 Indole-3-glycerol phosphate synthase CAY59_06755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CAY59_06760 PF02885 Glycosyl transferase family, helical bundle domain CAY59_06760 PF00591 Glycosyl transferase family, a/b domain CAY59_06765 PF00117 Glutamine amidotransferase class-I CAY59_06770 PF00425 chorismate binding enzyme CAY59_06770 PF04715 Anthranilate synthase component I, N terminal region CAY59_06775 PF08056 Tryptophan operon leader peptide CAY59_06780 PF02811 PHP domain CAY59_06785 PF01300 Telomere recombination CAY59_06795 PF01479 S4 domain CAY59_06795 PF00849 RNA pseudouridylate synthase CAY59_06800 PF04269 Protein of unknown function, DUF440 CAY59_06805 PF01132 Elongation factor P (EF-P) OB domain CAY59_06805 PF08207 Elongation factor P (EF-P) KOW-like domain CAY59_06805 PF09285 Elongation factor P, C-terminal CAY59_06815 PF00136 DNA polymerase family B CAY59_06815 PF03104 DNA polymerase family B, exonuclease domain CAY59_06820 PF00196 Bacterial regulatory proteins, luxR family CAY59_06820 PF00072 Response regulator receiver domain CAY59_06825 PF02151 UvrB/uvrC motif CAY59_06825 PF08459 UvrC Helix-hairpin-helix N-terminal CAY59_06825 PF01541 GIY-YIG catalytic domain CAY59_06830 PF01066 CDP-alcohol phosphatidyltransferase CAY59_06865 PF16653 Saccharopine dehydrogenase C-terminal domain CAY59_06865 PF03435 Saccharopine dehydrogenase NADP binding domain CAY59_06870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CAY59_06885 PF00994 Probable molybdopterin binding domain CAY59_06885 PF02464 Competence-damaged protein CAY59_06895 PF00268 Ribonucleotide reductase, small chain CAY59_06900 PF00317 Ribonucleotide reductase, all-alpha domain CAY59_06900 PF02867 Ribonucleotide reductase, barrel domain CAY59_06900 PF03477 ATP cone domain CAY59_06910 PF03989 DNA gyrase C-terminal domain, beta-propeller CAY59_06910 PF00521 DNA gyrase/topoisomerase IV, subunit A CAY59_06925 PF02335 Cytochrome c552 CAY59_06935 PF13247 4Fe-4S dicluster domain CAY59_06940 PF03916 Polysulphide reductase, NrfD CAY59_06945 PF01578 Cytochrome C assembly protein CAY59_06945 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CAY59_06950 PF08534 Redoxin CAY59_06955 PF03918 Cytochrome C biogenesis protein CAY59_06965 PF00925 GTP cyclohydrolase II CAY59_06990 PF01471 Putative peptidoglycan binding domain CAY59_06990 PF03734 L,D-transpeptidase catalytic domain CAY59_06995 PF05951 Bacterial protein of unknown function (DUF882) CAY59_07000 PF00753 Metallo-beta-lactamase superfamily CAY59_07015 PF03480 Bacterial extracellular solute-binding protein, family 7 CAY59_07025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAY59_07030 PF07730 Histidine kinase CAY59_07030 PF17200 Single Cache domain 2 CAY59_07035 PF00196 Bacterial regulatory proteins, luxR family CAY59_07035 PF00072 Response regulator receiver domain CAY59_07040 PF01047 MarR family CAY59_07045 PF02028 BCCT, betaine/carnitine/choline family transporter CAY59_07050 PF00672 HAMP domain CAY59_07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_07070 PF00155 Aminotransferase class I and II CAY59_07090 PF00155 Aminotransferase class I and II CAY59_07090 PF00392 Bacterial regulatory proteins, gntR family CAY59_07110 PF02743 Cache domain CAY59_07110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_07110 PF00672 HAMP domain CAY59_07115 PF01242 6-pyruvoyl tetrahydropterin synthase CAY59_07120 PF00196 Bacterial regulatory proteins, luxR family CAY59_07120 PF00072 Response regulator receiver domain CAY59_07130 PF00563 EAL domain CAY59_07130 PF00990 Diguanylate cyclase, GGDEF domain CAY59_07130 PF03707 Bacterial signalling protein N terminal repeat CAY59_07135 PF03315 Serine dehydratase beta chain CAY59_07135 PF03313 Serine dehydratase alpha chain CAY59_07140 PF03222 Tryptophan/tyrosine permease family CAY59_07145 PF00293 NUDIX domain CAY59_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_07155 PF00072 Response regulator receiver domain CAY59_07155 PF00512 His Kinase A (phospho-acceptor) domain CAY59_07155 PF09308 LuxQ, periplasmic CAY59_07160 PF00425 chorismate binding enzyme CAY59_07160 PF04715 Anthranilate synthase component I, N terminal region CAY59_07175 PF04317 YcjX-like family, DUF463 CAY59_07180 PF05128 Domain of unknown function (DUF697) CAY59_07185 PF18024 Helix-turn-helix domain CAY59_07185 PF00158 Sigma-54 interaction domain CAY59_07190 PF13302 Acetyltransferase (GNAT) domain CAY59_07205 PF13495 Phage integrase, N-terminal SAM-like domain CAY59_07205 PF00589 Phage integrase family CAY59_07295 PF00583 Acetyltransferase (GNAT) family CAY59_07380 PF13274 Protein of unknown function (DUF4065) CAY59_07410 PF00293 NUDIX domain CAY59_07470 PF04229 GrpB protein CAY59_07480 PF00293 NUDIX domain CAY59_07615 PF13649 Methyltransferase domain CAY59_07860 PF00106 short chain dehydrogenase CAY59_07905 PF00583 Acetyltransferase (GNAT) family CAY59_07910 PF00939 Sodium:sulfate symporter transmembrane region CAY59_07915 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_07915 PF00512 His Kinase A (phospho-acceptor) domain CAY59_07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_07920 PF00072 Response regulator receiver domain CAY59_07920 PF00158 Sigma-54 interaction domain CAY59_07920 PF02954 Bacterial regulatory protein, Fis family CAY59_07925 PF03707 Bacterial signalling protein N terminal repeat CAY59_07925 PF00990 Diguanylate cyclase, GGDEF domain CAY59_07925 PF00563 EAL domain CAY59_07930 PF11871 Domain of unknown function (DUF3391) CAY59_07930 PF01966 HD domain CAY59_07935 PF01810 LysE type translocator CAY59_07940 PF11230 Protein of unknown function (DUF3029) CAY59_07945 PF04055 Radical SAM superfamily CAY59_07950 PF03466 LysR substrate binding domain CAY59_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_07955 PF03741 Integral membrane protein TerC family CAY59_07965 PF01966 HD domain CAY59_07970 PF00106 short chain dehydrogenase CAY59_07975 PF00465 Iron-containing alcohol dehydrogenase CAY59_07980 PF03222 Tryptophan/tyrosine permease family CAY59_08000 PF00664 ABC transporter transmembrane region CAY59_08000 PF00005 ABC transporter CAY59_08005 PF00005 ABC transporter CAY59_08005 PF00664 ABC transporter transmembrane region CAY59_08015 PF03466 LysR substrate binding domain CAY59_08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_08025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAY59_08025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAY59_08040 PF00012 Hsp70 protein CAY59_08045 PF00012 Hsp70 protein CAY59_08055 PF00990 Diguanylate cyclase, GGDEF domain CAY59_08085 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAY59_08085 PF01447 Thermolysin metallopeptidase, catalytic domain CAY59_08085 PF03413 Peptidase propeptide and YPEB domain CAY59_08085 PF07504 Fungalysin/Thermolysin Propeptide Motif CAY59_08085 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_08105 PF17912 MalK OB fold domain CAY59_08105 PF00005 ABC transporter CAY59_08105 PF03459 TOBE domain CAY59_08110 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CAY59_08115 PF00356 Bacterial regulatory proteins, lacI family CAY59_08120 PF13416 Bacterial extracellular solute-binding protein CAY59_08125 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_08130 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_08140 PF00933 Glycosyl hydrolase family 3 N terminal domain CAY59_08140 PF14310 Fibronectin type III-like domain CAY59_08140 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAY59_08145 PF01568 Molydopterin dinucleotide binding domain CAY59_08145 PF00384 Molybdopterin oxidoreductase CAY59_08145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CAY59_08150 PF13247 4Fe-4S dicluster domain CAY59_08150 PF12800 4Fe-4S binding domain CAY59_08155 PF04976 DMSO reductase anchor subunit (DmsC) CAY59_08160 PF02613 Nitrate reductase delta subunit CAY59_08170 PF02525 Flavodoxin-like fold CAY59_08175 PF00270 DEAD/DEAH box helicase CAY59_08175 PF11898 Domain of unknown function (DUF3418) CAY59_08175 PF00271 Helicase conserved C-terminal domain CAY59_08175 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CAY59_08175 PF04408 Helicase associated domain (HA2) CAY59_08205 PF04204 Homoserine O-succinyltransferase CAY59_08225 PF00893 Small Multidrug Resistance protein CAY59_08230 PF13520 Amino acid permease CAY59_08235 PF01810 LysE type translocator CAY59_08240 PF03279 Bacterial lipid A biosynthesis acyltransferase CAY59_08245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_08260 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CAY59_08265 PF01810 LysE type translocator CAY59_08275 PF03440 Aerolysin/Pertussis toxin (APT) domain CAY59_08275 PF01117 Aerolysin toxin CAY59_08280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAY59_08285 PF01117 Aerolysin toxin CAY59_08285 PF03440 Aerolysin/Pertussis toxin (APT) domain CAY59_08300 PF01235 Sodium:alanine symporter family CAY59_08320 PF00884 Sulfatase CAY59_08325 PF01406 tRNA synthetases class I (C) catalytic domain CAY59_08330 PF01554 MatE CAY59_08335 PF00571 CBS domain CAY59_08345 PF02028 BCCT, betaine/carnitine/choline family transporter CAY59_08350 PF00583 Acetyltransferase (GNAT) family CAY59_08355 PF00202 Aminotransferase class-III CAY59_08360 PF06339 Ectoine synthase CAY59_08365 PF13840 ACT domain CAY59_08365 PF00696 Amino acid kinase family CAY59_08380 PF03150 Di-haem cytochrome c peroxidase CAY59_08380 PF00034 Cytochrome c CAY59_08385 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_08385 PF00082 Subtilase family CAY59_08385 PF05922 Peptidase inhibitor I9 CAY59_08390 PF07504 Fungalysin/Thermolysin Propeptide Motif CAY59_08390 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_08390 PF03413 Peptidase propeptide and YPEB domain CAY59_08390 PF01447 Thermolysin metallopeptidase, catalytic domain CAY59_08390 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAY59_08405 PF01220 Dehydroquinase class II CAY59_08410 PF01488 Shikimate / quinate 5-dehydrogenase CAY59_08410 PF08501 Shikimate dehydrogenase substrate binding domain CAY59_08415 PF03737 Aldolase/RraA CAY59_08420 PF04303 PrpF protein CAY59_08425 PF04909 Amidohydrolase CAY59_08430 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CAY59_08435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CAY59_08440 PF02585 GlcNAc-PI de-N-acetylase CAY59_08445 PF00248 Aldo/keto reductase family CAY59_08450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAY59_08460 PF03466 LysR substrate binding domain CAY59_08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_08465 PF03480 Bacterial extracellular solute-binding protein, family 7 CAY59_08470 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CAY59_08475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAY59_08480 PF03547 Membrane transport protein CAY59_08490 PF01261 Xylose isomerase-like TIM barrel CAY59_08520 PF00174 Oxidoreductase molybdopterin binding domain CAY59_08525 PF01794 Ferric reductase like transmembrane component CAY59_08540 PF08534 Redoxin CAY59_08545 PF02630 SCO1/SenC CAY59_08560 PF03264 NapC/NirT cytochrome c family, N-terminal region CAY59_08575 PF03466 LysR substrate binding domain CAY59_08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_08590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_08605 PF00989 PAS fold CAY59_08605 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CAY59_08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_08605 PF17203 Single cache domain 3 CAY59_08610 PF00072 Response regulator receiver domain CAY59_08610 PF12431 Transcriptional regulator CAY59_08615 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CAY59_08615 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CAY59_08620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CAY59_08625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAY59_08625 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CAY59_08655 PF01590 GAF domain CAY59_08655 PF02954 Bacterial regulatory protein, Fis family CAY59_08655 PF00158 Sigma-54 interaction domain CAY59_08660 PF00171 Aldehyde dehydrogenase family CAY59_08665 PF16868 NMT1-like family CAY59_08670 PF01925 Sulfite exporter TauE/SafE CAY59_08675 PF01970 Tripartite tricarboxylate transporter TctA family CAY59_08715 PF11849 Domain of unknown function (DUF3369) CAY59_08720 PF03793 PASTA domain CAY59_08720 PF00069 Protein kinase domain CAY59_08755 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_08755 PF10431 C-terminal, D2-small domain, of ClpB protein CAY59_08755 PF17871 AAA lid domain CAY59_08755 PF07724 AAA domain (Cdc48 subfamily) CAY59_08830 PF00285 Citrate synthase, C-terminal domain CAY59_08835 PF00330 Aconitase family (aconitate hydratase) CAY59_08835 PF00694 Aconitase C-terminal domain CAY59_08840 PF04303 PrpF protein CAY59_08845 PF13193 AMP-binding enzyme C-terminal domain CAY59_08845 PF00501 AMP-binding enzyme CAY59_08845 PF16177 Acetyl-coenzyme A synthetase N-terminus CAY59_08850 PF03466 LysR substrate binding domain CAY59_08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_08855 PF00884 Sulfatase CAY59_08860 PF00583 Acetyltransferase (GNAT) family CAY59_08865 PF00089 Trypsin CAY59_08880 PF04055 Radical SAM superfamily CAY59_08885 PF06508 Queuosine biosynthesis protein QueC CAY59_08890 PF17158 Membrane-associated sensor, integral membrane domain CAY59_08890 PF00990 Diguanylate cyclase, GGDEF domain CAY59_08900 PF05736 OprF membrane domain CAY59_08900 PF00691 OmpA family CAY59_08930 PF00691 OmpA family CAY59_08930 PF05736 OprF membrane domain CAY59_08945 PF17785 PUA-like domain CAY59_08945 PF10672 S-adenosylmethionine-dependent methyltransferase CAY59_08955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_08955 PF00672 HAMP domain CAY59_08955 PF02743 Cache domain CAY59_08960 PF00708 Acylphosphatase CAY59_08965 PF04358 DsrC like protein CAY59_08975 PF01027 Inhibitor of apoptosis-promoting Bax1 CAY59_08980 PF00005 ABC transporter CAY59_08985 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_08990 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_08995 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_09005 PF04461 Protein of unknown function (DUF520) CAY59_09010 PF00793 DAHP synthetase I family CAY59_09030 PF01189 16S rRNA methyltransferase RsmB/F CAY59_09030 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CAY59_09030 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CAY59_09035 PF02470 MlaD protein CAY59_09040 PF04403 Paraquat-inducible protein A CAY59_09045 PF00005 ABC transporter CAY59_09045 PF00664 ABC transporter transmembrane region CAY59_09050 PF13185 GAF domain CAY59_09055 PF17516 ProQ C-terminal domain CAY59_09055 PF04352 ProQ/FINO family CAY59_09060 PF17804 Tail specific protease N-terminal domain CAY59_09060 PF00595 PDZ domain CAY59_09060 PF11818 C-terminal domain of tail specific protease (DUF3340) CAY59_09060 PF03572 Peptidase family S41 CAY59_09070 PF01433 Peptidase family M1 domain CAY59_09070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CAY59_09070 PF11940 Domain of unknown function (DUF3458) Ig-like fold CAY59_09080 PF05088 Bacterial NAD-glutamate dehydrogenase CAY59_09085 PF01180 Dihydroorotate dehydrogenase CAY59_09090 PF07126 Cell-division protein ZapC CAY59_09095 PF01170 Putative RNA methylase family UPF0020 CAY59_09095 PF02926 THUMP domain CAY59_09095 PF10672 S-adenosylmethionine-dependent methyltransferase CAY59_09115 PF04957 Ribosome modulation factor CAY59_09120 PF07977 FabA-like domain CAY59_09125 PF13654 AAA domain CAY59_09125 PF05362 Lon protease (S16) C-terminal proteolytic domain CAY59_09130 PF06303 MatP N-terminal domain CAY59_09130 PF17414 MatP C-terminal ribbon-helix-helix domain CAY59_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_09155 PF00512 His Kinase A (phospho-acceptor) domain CAY59_09155 PF09308 LuxQ, periplasmic CAY59_09155 PF00072 Response regulator receiver domain CAY59_09170 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAY59_09185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAY59_09185 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CAY59_09195 PF00403 Heavy-metal-associated domain CAY59_09210 PF13545 Crp-like helix-turn-helix domain CAY59_09210 PF00027 Cyclic nucleotide-binding domain CAY59_09215 PF00582 Universal stress protein family CAY59_09220 PF01171 PP-loop family CAY59_09240 PF08402 TOBE domain CAY59_09240 PF00005 ABC transporter CAY59_09245 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_09250 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_09255 PF13416 Bacterial extracellular solute-binding protein CAY59_09260 PF13416 Bacterial extracellular solute-binding protein CAY59_09265 PF02146 Sir2 family CAY59_09285 PF13247 4Fe-4S dicluster domain CAY59_09290 PF00384 Molybdopterin oxidoreductase CAY59_09290 PF01568 Molydopterin dinucleotide binding domain CAY59_09290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CAY59_09300 PF02613 Nitrate reductase delta subunit CAY59_09320 PF02634 FdhD/NarQ family CAY59_09325 PF00884 Sulfatase CAY59_09330 PF03009 Glycerophosphoryl diester phosphodiesterase family CAY59_09335 PF00005 ABC transporter CAY59_09335 PF12848 ABC transporter CAY59_09350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_09350 PF00512 His Kinase A (phospho-acceptor) domain CAY59_09355 PF00158 Sigma-54 interaction domain CAY59_09355 PF00072 Response regulator receiver domain CAY59_09355 PF02954 Bacterial regulatory protein, Fis family CAY59_09360 PF12849 PBP superfamily domain CAY59_09365 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_09370 PF08402 TOBE domain CAY59_09370 PF00005 ABC transporter CAY59_09375 PF12804 MobA-like NTP transferase domain CAY59_09380 PF03453 MoeA N-terminal region (domain I and II) CAY59_09380 PF03454 MoeA C-terminal region (domain IV) CAY59_09380 PF00994 Probable molybdopterin binding domain CAY59_09390 PF00480 ROK family CAY59_09445 PF12729 Four helix bundle sensory module for signal transduction CAY59_09445 PF00672 HAMP domain CAY59_09445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_09450 PF00877 NlpC/P60 family CAY59_09460 PF05230 MASE2 domain CAY59_09460 PF00990 Diguanylate cyclase, GGDEF domain CAY59_09465 PF01339 CheB methylesterase CAY59_09465 PF00072 Response regulator receiver domain CAY59_09485 PF01554 MatE CAY59_09495 PF01068 ATP dependent DNA ligase domain CAY59_09495 PF14743 DNA ligase OB-like domain CAY59_09500 PF01740 STAS domain CAY59_09505 PF00691 OmpA family CAY59_09510 PF10531 SLBB domain CAY59_09510 PF02563 Polysaccharide biosynthesis/export protein CAY59_09525 PF00158 Sigma-54 interaction domain CAY59_09525 PF00072 Response regulator receiver domain CAY59_09525 PF02954 Bacterial regulatory protein, Fis family CAY59_09530 PF13439 Glycosyltransferase Family 4 CAY59_09530 PF00534 Glycosyl transferases group 1 CAY59_09535 PF00534 Glycosyl transferases group 1 CAY59_09535 PF13439 Glycosyltransferase Family 4 CAY59_09565 PF13439 Glycosyltransferase Family 4 CAY59_09565 PF00534 Glycosyl transferases group 1 CAY59_09575 PF02397 Bacterial sugar transferase CAY59_09585 PF13322 Domain of unknown function (DUF4092) CAY59_09585 PF13402 Peptidase M60, enhancin and enhancin-like CAY59_09585 PF17291 N-terminal domain of M60-like peptidases CAY59_09610 PF00563 EAL domain CAY59_09610 PF00990 Diguanylate cyclase, GGDEF domain CAY59_09610 PF13188 PAS domain CAY59_09610 PF03707 Bacterial signalling protein N terminal repeat CAY59_09635 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_09635 PF12464 Maltose acetyltransferase CAY59_09645 PF01928 CYTH domain CAY59_09660 PF01047 MarR family CAY59_09670 PF01238 Phosphomannose isomerase type I CAY59_09685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_09685 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_09695 PF05378 Hydantoinase/oxoprolinase N-terminal region CAY59_09695 PF01968 Hydantoinase/oxoprolinase CAY59_09705 PF09261 Alpha mannosidase middle domain CAY59_09705 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain CAY59_09705 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 CAY59_09705 PF07748 Glycosyl hydrolases family 38 C-terminal domain CAY59_09705 PF01074 Glycosyl hydrolases family 38 N-terminal domain CAY59_09710 PF00480 ROK family CAY59_09725 PF00480 ROK family CAY59_09740 PF03729 Short repeat of unknown function (DUF308) CAY59_09745 PF00924 Mechanosensitive ion channel CAY59_09755 PF05922 Peptidase inhibitor I9 CAY59_09755 PF00082 Subtilase family CAY59_09755 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_09760 PF17945 Beta/Gamma crystallin CAY59_09760 PF12561 ToxR activated gene A lipoprotein domain CAY59_09765 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CAY59_09800 PF00873 AcrB/AcrD/AcrF family CAY59_09805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_09815 PF03616 Sodium/glutamate symporter CAY59_09840 PF14497 Glutathione S-transferase, C-terminal domain CAY59_09840 PF02798 Glutathione S-transferase, N-terminal domain CAY59_09850 PF04209 homogentisate 1,2-dioxygenase CAY59_09855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_09865 PF01546 Peptidase family M20/M25/M40 CAY59_09865 PF07687 Peptidase dimerisation domain CAY59_09875 PF12561 ToxR activated gene A lipoprotein domain CAY59_09875 PF00041 Fibronectin type III domain CAY59_09900 PF01048 Phosphorylase superfamily CAY59_09915 PF00072 Response regulator receiver domain CAY59_09915 PF00990 Diguanylate cyclase, GGDEF domain CAY59_09920 PF05971 RNA methyltransferase CAY59_09925 PF01863 Protein of unknown function DUF45 CAY59_09935 PF11999 Protein of unknown function (DUF3494) CAY59_09935 PF02368 Bacterial Ig-like domain (group 2) CAY59_09945 PF05199 GMC oxidoreductase CAY59_09945 PF00732 GMC oxidoreductase CAY59_09950 PF01339 CheB methylesterase CAY59_09950 PF00072 Response regulator receiver domain CAY59_09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_09960 PF00072 Response regulator receiver domain CAY59_09960 PF09308 LuxQ, periplasmic CAY59_09960 PF00512 His Kinase A (phospho-acceptor) domain CAY59_10020 PF07963 Prokaryotic N-terminal methylation motif CAY59_10020 PF14245 Type IV pilin PilA CAY59_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_10045 PF03466 LysR substrate binding domain CAY59_10050 PF07690 Major Facilitator Superfamily CAY59_10070 PF00005 ABC transporter CAY59_10075 PF01032 FecCD transport family CAY59_10080 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CAY59_10090 PF00300 Histidine phosphatase superfamily (branch 1) CAY59_10095 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CAY59_10100 PF02654 Cobalamin-5-phosphate synthase CAY59_10105 PF02277 Phosphoribosyltransferase CAY59_10110 PF01613 Flavin reductase like domain CAY59_10120 PF13460 NAD(P)H-binding CAY59_10135 PF00929 Exonuclease CAY59_10135 PF08411 Exonuclease C-terminal CAY59_10140 PF03788 LrgA family CAY59_10145 PF04172 LrgB-like family CAY59_10150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAY59_10150 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CAY59_10165 PF05724 Thiopurine S-methyltransferase (TPMT) CAY59_10175 PF00216 Bacterial DNA-binding protein CAY59_10190 PF00668 Condensation domain CAY59_10190 PF00501 AMP-binding enzyme CAY59_10190 PF00550 Phosphopantetheine attachment site CAY59_10190 PF13193 AMP-binding enzyme C-terminal domain CAY59_10195 PF01032 FecCD transport family CAY59_10205 PF01497 Periplasmic binding protein CAY59_10210 PF07715 TonB-dependent Receptor Plug Domain CAY59_10210 PF00593 TonB dependent receptor CAY59_10215 PF00668 Condensation domain CAY59_10215 PF00501 AMP-binding enzyme CAY59_10215 PF13193 AMP-binding enzyme C-terminal domain CAY59_10220 PF00975 Thioesterase domain CAY59_10225 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CAY59_10230 PF00550 Phosphopantetheine attachment site CAY59_10230 PF00668 Condensation domain CAY59_10230 PF00501 AMP-binding enzyme CAY59_10235 PF00282 Pyridoxal-dependent decarboxylase conserved domain CAY59_10240 PF00664 ABC transporter transmembrane region CAY59_10240 PF00005 ABC transporter CAY59_10240 PF08021 Siderophore-interacting FAD-binding domain CAY59_10240 PF04954 Siderophore-interacting protein CAY59_10245 PF00664 ABC transporter transmembrane region CAY59_10245 PF00005 ABC transporter CAY59_10250 PF00857 Isochorismatase family CAY59_10250 PF00550 Phosphopantetheine attachment site CAY59_10255 PF03147 Ferredoxin-fold anticodon binding domain CAY59_10255 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CAY59_10255 PF01588 Putative tRNA binding domain CAY59_10255 PF03484 tRNA synthetase B5 domain CAY59_10255 PF03483 B3/4 domain CAY59_10260 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CAY59_10260 PF01409 tRNA synthetases class II core domain (F) CAY59_10300 PF01906 Putative heavy-metal-binding CAY59_10305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_10310 PF01042 Endoribonuclease L-PSP CAY59_10330 PF00453 Ribosomal protein L20 CAY59_10335 PF01632 Ribosomal protein L35 CAY59_10340 PF00707 Translation initiation factor IF-3, C-terminal domain CAY59_10340 PF05198 Translation initiation factor IF-3, N-terminal domain CAY59_10345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CAY59_10345 PF03129 Anticodon binding domain CAY59_10345 PF02824 TGS domain CAY59_10345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAY59_10355 PF00392 Bacterial regulatory proteins, gntR family CAY59_10355 PF07702 UTRA domain CAY59_10360 PF01979 Amidohydrolase family CAY59_10365 PF00491 Arginase family CAY59_10370 PF17392 Urocanase C-terminal domain CAY59_10370 PF17391 Urocanase N-terminal domain CAY59_10370 PF01175 Urocanase Rossmann-like domain CAY59_10375 PF00221 Aromatic amino acid lyase CAY59_10395 PF03496 ADP-ribosyltransferase exoenzyme CAY59_10400 PF03496 ADP-ribosyltransferase exoenzyme CAY59_10420 PF02913 FAD linked oxidases, C-terminal domain CAY59_10420 PF13183 4Fe-4S dicluster domain CAY59_10420 PF01565 FAD binding domain CAY59_10435 PF05736 OprF membrane domain CAY59_10435 PF00691 OmpA family CAY59_10460 PF01259 SAICAR synthetase CAY59_10465 PF09423 PhoD-like phosphatase CAY59_10465 PF16655 PhoD-like phosphatase, N-terminal domain CAY59_10475 PF02253 Phospholipase A1 CAY59_10480 PF04408 Helicase associated domain (HA2) CAY59_10480 PF00270 DEAD/DEAH box helicase CAY59_10480 PF11898 Domain of unknown function (DUF3418) CAY59_10480 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CAY59_10480 PF00271 Helicase conserved C-terminal domain CAY59_10485 PF00390 Malic enzyme, N-terminal domain CAY59_10485 PF03949 Malic enzyme, NAD binding domain CAY59_10490 PF02698 DUF218 domain CAY59_10495 PF00939 Sodium:sulfate symporter transmembrane region CAY59_10500 PF00990 Diguanylate cyclase, GGDEF domain CAY59_10500 PF08448 PAS fold CAY59_10520 PF00266 Aminotransferase class-V CAY59_10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_10535 PF00664 ABC transporter transmembrane region CAY59_10535 PF00005 ABC transporter CAY59_10540 PF00005 ABC transporter CAY59_10540 PF00664 ABC transporter transmembrane region CAY59_10545 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_10550 PF02447 GntP family permease CAY59_10555 PF03466 LysR substrate binding domain CAY59_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_10560 PF12792 CSS motif domain associated with EAL CAY59_10560 PF00563 EAL domain CAY59_10595 PF08448 PAS fold CAY59_10595 PF08447 PAS fold CAY59_10595 PF00563 EAL domain CAY59_10595 PF00990 Diguanylate cyclase, GGDEF domain CAY59_10610 PF00266 Aminotransferase class-V CAY59_10620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_10620 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_10620 PF00512 His Kinase A (phospho-acceptor) domain CAY59_10635 PF04994 TfoX C-terminal domain CAY59_10635 PF04993 TfoX N-terminal domain CAY59_10645 PF03956 Lysine exporter LysO CAY59_10655 PF00282 Pyridoxal-dependent decarboxylase conserved domain CAY59_10660 PF01380 SIS domain CAY59_10660 PF01418 Helix-turn-helix domain, rpiR family CAY59_10665 PF00465 Iron-containing alcohol dehydrogenase CAY59_10670 PF00462 Glutaredoxin CAY59_10675 PF02080 TrkA-C domain CAY59_10675 PF06826 Predicted Permease Membrane Region CAY59_10680 PF07055 Enoyl reductase FAD binding domain CAY59_10680 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CAY59_10680 PF12241 Trans-2-enoyl-CoA reductase catalytic region CAY59_10685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAY59_10685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAY59_10685 PF09317 Domain of unknown function (DUF1974) CAY59_10685 PF02770 Acyl-CoA dehydrogenase, middle domain CAY59_10690 PF16295 Tetracyclin repressor-like, C-terminal domain CAY59_10690 PF00440 Bacterial regulatory proteins, tetR family CAY59_10695 PF06965 Na+/H+ antiporter 1 CAY59_10710 PF00005 ABC transporter CAY59_10715 PF01554 MatE CAY59_10720 PF13460 NAD(P)H-binding CAY59_10720 PF11066 Protein of unknown function (DUF2867) CAY59_10725 PF01734 Patatin-like phospholipase CAY59_10735 PF07690 Major Facilitator Superfamily CAY59_10740 PF01479 S4 domain CAY59_10740 PF00849 RNA pseudouridylate synthase CAY59_10745 PF00271 Helicase conserved C-terminal domain CAY59_10745 PF04851 Type III restriction enzyme, res subunit CAY59_10750 PF08448 PAS fold CAY59_10750 PF00990 Diguanylate cyclase, GGDEF domain CAY59_10760 PF00486 Transcriptional regulatory protein, C terminal CAY59_10760 PF00072 Response regulator receiver domain CAY59_10765 PF00672 HAMP domain CAY59_10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_10765 PF00512 His Kinase A (phospho-acceptor) domain CAY59_10775 PF02709 N-terminal domain of galactosyltransferase CAY59_10775 PF00535 Glycosyl transferase family 2 CAY59_10780 PF01386 Ribosomal L25p family CAY59_10795 PF00149 Calcineurin-like phosphoesterase CAY59_10795 PF02872 5'-nucleotidase, C-terminal domain CAY59_10810 PF06945 Protein of unknown function (DUF1289) CAY59_10820 PF01740 STAS domain CAY59_10820 PF00916 Sulfate permease family CAY59_10830 PF00072 Response regulator receiver domain CAY59_10830 PF00196 Bacterial regulatory proteins, luxR family CAY59_10835 PF00512 His Kinase A (phospho-acceptor) domain CAY59_10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_10845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CAY59_10845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_10855 PF09335 SNARE associated Golgi protein CAY59_10860 PF13416 Bacterial extracellular solute-binding protein CAY59_10865 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_10870 PF00005 ABC transporter CAY59_10875 PF01066 CDP-alcohol phosphatidyltransferase CAY59_10890 PF01590 GAF domain CAY59_10890 PF00158 Sigma-54 interaction domain CAY59_10895 PF03063 Prismane/CO dehydrogenase family CAY59_10900 PF00970 Oxidoreductase FAD-binding domain CAY59_10900 PF00111 2Fe-2S iron-sulfur cluster binding domain CAY59_10900 PF00175 Oxidoreductase NAD-binding domain CAY59_10910 PF00849 RNA pseudouridylate synthase CAY59_10915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_10915 PF00672 HAMP domain CAY59_10915 PF12729 Four helix bundle sensory module for signal transduction CAY59_10920 PF00209 Sodium:neurotransmitter symporter family CAY59_10925 PF13396 Phospholipase_D-nuclease N-terminal CAY59_10925 PF13091 PLD-like domain CAY59_10930 PF01053 Cys/Met metabolism PLP-dependent enzyme CAY59_10935 PF00561 alpha/beta hydrolase fold CAY59_10940 PF03280 Proteobacterial lipase chaperone protein CAY59_10955 PF03352 Methyladenine glycosylase CAY59_10960 PF00873 AcrB/AcrD/AcrF family CAY59_10965 PF13533 Biotin-lipoyl like CAY59_10975 PF04024 PspC domain CAY59_10980 PF06667 Phage shock protein B CAY59_10985 PF04012 PspA/IM30 family CAY59_10990 PF00158 Sigma-54 interaction domain CAY59_10990 PF02954 Bacterial regulatory protein, Fis family CAY59_10995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_11000 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_11005 PF12911 N-terminal TM domain of oligopeptide transport permease C CAY59_11005 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_11010 PF00005 ABC transporter CAY59_11010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_11015 PF00005 ABC transporter CAY59_11025 PF02833 DHHA2 domain CAY59_11025 PF01368 DHH family CAY59_11035 PF16874 Glycosyl hydrolase family 36 C-terminal domain CAY59_11035 PF16875 Glycosyl hydrolase family 36 N-terminal domain CAY59_11045 PF03264 NapC/NirT cytochrome c family, N-terminal region CAY59_11050 PF06796 Periplasmic nitrate reductase protein NapE CAY59_11055 PF03649 Uncharacterised protein family (UPF0014) CAY59_11060 PF01226 Formate/nitrite transporter CAY59_11085 PF02698 DUF218 domain CAY59_11090 PF00265 Thymidine kinase CAY59_11095 PF01406 tRNA synthetases class I (C) catalytic domain CAY59_11095 PF09190 DALR domain CAY59_11100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAY59_11105 PF00149 Calcineurin-like phosphoesterase CAY59_11110 PF08668 HDOD domain CAY59_11110 PF00563 EAL domain CAY59_11115 PF02810 SEC-C motif CAY59_11120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CAY59_11120 PF01502 Phosphoribosyl-AMP cyclohydrolase CAY59_11125 PF00977 Histidine biosynthesis protein CAY59_11130 PF00977 Histidine biosynthesis protein CAY59_11135 PF00117 Glutamine amidotransferase class-I CAY59_11140 PF08645 Polynucleotide kinase 3 phosphatase CAY59_11140 PF00475 Imidazoleglycerol-phosphate dehydratase CAY59_11145 PF00155 Aminotransferase class I and II CAY59_11150 PF00815 Histidinol dehydrogenase CAY59_11155 PF01634 ATP phosphoribosyltransferase CAY59_11155 PF08029 HisG, C-terminal domain CAY59_11160 PF00072 Response regulator receiver domain CAY59_11160 PF00158 Sigma-54 interaction domain CAY59_11160 PF02954 Bacterial regulatory protein, Fis family CAY59_11165 PF03553 Na+/H+ antiporter family CAY59_11170 PF00816 H-NS histone family CAY59_11175 PF00294 pfkB family carbohydrate kinase CAY59_11190 PF04356 Protein of unknown function (DUF489) CAY59_11195 PF08328 Adenylosuccinate lyase C-terminal CAY59_11195 PF00206 Lyase CAY59_11230 PF00106 short chain dehydrogenase CAY59_11240 PF01435 Peptidase family M48 CAY59_11255 PF00155 Aminotransferase class I and II CAY59_11260 PF04055 Radical SAM superfamily CAY59_11260 PF06968 Biotin and Thiamin Synthesis associated domain CAY59_11270 PF01258 Prokaryotic dksA/traR C4-type zinc finger CAY59_11285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CAY59_11285 PF02403 Seryl-tRNA synthetase N-terminal domain CAY59_11290 PF12002 MgsA AAA+ ATPase C terminal CAY59_11290 PF16193 AAA C-terminal domain CAY59_11290 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_11305 PF01037 Lrp/AsnC ligand binding domain CAY59_11310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAY59_11310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CAY59_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_11320 PF03466 LysR substrate binding domain CAY59_11330 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CAY59_11345 PF01979 Amidohydrolase family CAY59_11350 PF01752 Collagenase CAY59_11350 PF08453 Peptidase family M9 N-terminal CAY59_11350 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_11370 PF03372 Endonuclease/Exonuclease/phosphatase family CAY59_11380 PF00579 tRNA synthetases class I (W and Y) CAY59_11385 PF00141 Peroxidase CAY59_11390 PF01464 Transglycosylase SLT domain CAY59_11390 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_11405 PF03606 C4-dicarboxylate anaerobic carrier CAY59_11410 PF01546 Peptidase family M20/M25/M40 CAY59_11410 PF07687 Peptidase dimerisation domain CAY59_11415 PF07729 FCD domain CAY59_11415 PF00392 Bacterial regulatory proteins, gntR family CAY59_11425 PF00873 AcrB/AcrD/AcrF family CAY59_11430 PF00529 HlyD membrane-fusion protein of T1SS CAY59_11430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_11445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_11445 PF00672 HAMP domain CAY59_11445 PF02743 Cache domain CAY59_11455 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_11460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_11465 PF00005 ABC transporter CAY59_11465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_11470 PF00005 ABC transporter CAY59_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_11480 PF03831 PhnA domain CAY59_11480 PF08274 PhnA Zinc-Ribbon CAY59_11500 PF00884 Sulfatase CAY59_11530 PF05844 YopD protein CAY59_11540 PF07720 Tetratricopeptide repeat CAY59_11545 PF04792 V antigen (LcrV) protein CAY59_11555 PF09621 Type III secretion system regulator (LcrR) CAY59_11560 PF00771 FHIPEP family CAY59_11580 PF09059 TyeA CAY59_11585 PF07201 HrpJ-like domain CAY59_11590 PF18269 T3SS EscN ATPase C-terminal domain CAY59_11590 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAY59_11590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_11605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAY59_11610 PF00813 FliP family CAY59_11615 PF01313 Bacterial export proteins, family 3 CAY59_11620 PF01311 Bacterial export proteins, family 1 CAY59_11625 PF01312 FlhB HrpN YscU SpaS Family CAY59_11640 PF02661 Fic/DOC family CAY59_11660 PF02108 Flagellar assembly protein FliH CAY59_11670 PF01514 Secretory protein of YscJ/FliF family CAY59_11675 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI CAY59_11690 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CAY59_11720 PF12833 Helix-turn-helix domain CAY59_11760 PF06610 L-alanine exporter CAY59_11765 PF09308 LuxQ, periplasmic CAY59_11765 PF00072 Response regulator receiver domain CAY59_11765 PF00512 His Kinase A (phospho-acceptor) domain CAY59_11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_11775 PF03738 Glutathionylspermidine synthase preATP-grasp CAY59_11785 PF03994 Domain of Unknown Function (DUF350) CAY59_11795 PF02445 Quinolinate synthetase A protein CAY59_11800 PF13174 Tetratricopeptide repeat CAY59_11800 PF16331 TolA binding protein trimerisation CAY59_11810 PF04052 TolB amino-terminal domain CAY59_11810 PF07676 WD40-like Beta Propeller Repeat CAY59_11820 PF02472 Biopolymer transport protein ExbD/TolR CAY59_11825 PF01618 MotA/TolQ/ExbB proton channel family CAY59_11840 PF08173 Membrane bound YbgT-like protein CAY59_11845 PF02322 Cytochrome bd terminal oxidase subunit II CAY59_11850 PF01654 Cytochrome bd terminal oxidase subunit I CAY59_11860 PF00672 HAMP domain CAY59_11860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_11860 PF02203 Tar ligand binding domain homologue CAY59_11865 PF02075 Crossover junction endodeoxyribonuclease RuvC CAY59_11870 PF01336 OB-fold nucleic acid binding domain CAY59_11870 PF00152 tRNA synthetases class II (D, K and N) CAY59_11870 PF02938 GAD domain CAY59_11875 PF01904 Protein of unknown function DUF72 CAY59_11880 PF13649 Methyltransferase domain CAY59_11885 PF08003 Protein of unknown function (DUF1698) CAY59_11890 PF08443 RimK-like ATP-grasp domain CAY59_11890 PF18030 RimK PreATP-grasp domain CAY59_11905 PF00732 GMC oxidoreductase CAY59_11905 PF05199 GMC oxidoreductase CAY59_11910 PF13193 AMP-binding enzyme C-terminal domain CAY59_11910 PF00501 AMP-binding enzyme CAY59_11915 PF00171 Aldehyde dehydrogenase family CAY59_11920 PF12833 Helix-turn-helix domain CAY59_11920 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CAY59_11925 PF16330 MukB hinge domain CAY59_11925 PF04310 MukB N-terminal CAY59_11930 PF04288 MukE-like family CAY59_11935 PF17192 MukF middle domain CAY59_11935 PF03882 MukF winged-helix domain CAY59_11935 PF17193 MukF C-terminal domain CAY59_11945 PF02698 DUF218 domain CAY59_11950 PF00072 Response regulator receiver domain CAY59_11950 PF00486 Transcriptional regulatory protein, C terminal CAY59_11955 PF02613 Nitrate reductase delta subunit CAY59_11960 PF00356 Bacterial regulatory proteins, lacI family CAY59_11965 PF04993 TfoX N-terminal domain CAY59_11965 PF04994 TfoX C-terminal domain CAY59_11985 PF00534 Glycosyl transferases group 1 CAY59_11985 PF08323 Starch synthase catalytic domain CAY59_11990 PF00483 Nucleotidyl transferase CAY59_11995 PF08272 Topoisomerase I zinc-ribbon-like CAY59_11995 PF01131 DNA topoisomerase CAY59_11995 PF01396 Topoisomerase DNA binding C4 zinc finger CAY59_11995 PF01751 Toprim domain CAY59_12000 PF10692 Protein of unknown function (DUF2498) CAY59_12005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CAY59_12015 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CAY59_12020 PF04376 Arginine-tRNA-protein transferase, N terminus CAY59_12020 PF04377 Arginine-tRNA-protein transferase, C terminus CAY59_12025 PF01176 Translation initiation factor 1A / IF-1 CAY59_12030 PF07724 AAA domain (Cdc48 subfamily) CAY59_12030 PF10431 C-terminal, D2-small domain, of ClpB protein CAY59_12030 PF02861 Clp amino terminal domain, pathogenicity island component CAY59_12030 PF17871 AAA lid domain CAY59_12030 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_12035 PF02617 ATP-dependent Clp protease adaptor protein ClpS CAY59_12040 PF00313 'Cold-shock' DNA-binding domain CAY59_12045 PF03971 Monomeric isocitrate dehydrogenase CAY59_12050 PF00849 RNA pseudouridylate synthase CAY59_12055 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CAY59_12060 PF13609 Gram-negative porin CAY59_12070 PF01925 Sulfite exporter TauE/SafE CAY59_12075 PF07445 Primosomal replication protein priC CAY59_12080 PF10689 Protein of unknown function (DUF2496) CAY59_12085 PF03372 Endonuclease/Exonuclease/phosphatase family CAY59_12090 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_12095 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_12100 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_12105 PF00005 ABC transporter CAY59_12120 PF02901 Pyruvate formate lyase-like CAY59_12120 PF01228 Glycine radical CAY59_12130 PF04055 Radical SAM superfamily CAY59_12140 PF03887 YfbU domain CAY59_12145 PF06798 PrkA serine protein kinase C-terminal domain CAY59_12145 PF08298 PrkA AAA domain CAY59_12150 PF04285 Protein of unknown function (DUF444) CAY59_12155 PF04293 SpoVR like protein CAY59_12160 PF02348 Cytidylyltransferase CAY59_12165 PF03966 Trm112p-like protein CAY59_12170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CAY59_12175 PF00664 ABC transporter transmembrane region CAY59_12175 PF00005 ABC transporter CAY59_12180 PF13567 Domain of unknown function (DUF4131) CAY59_12180 PF03772 Competence protein CAY59_12180 PF00753 Metallo-beta-lactamase superfamily CAY59_12190 PF02687 FtsX-like permease family CAY59_12190 PF12704 MacB-like periplasmic core domain CAY59_12195 PF00005 ABC transporter CAY59_12200 PF02687 FtsX-like permease family CAY59_12200 PF12704 MacB-like periplasmic core domain CAY59_12210 PF00270 DEAD/DEAH box helicase CAY59_12210 PF03461 TRCF domain CAY59_12210 PF17757 UvrB interaction domain CAY59_12210 PF02559 CarD-like/TRCF domain CAY59_12210 PF00271 Helicase conserved C-terminal domain CAY59_12225 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_12230 PF05728 Uncharacterised protein family (UPF0227) CAY59_12240 PF13036 Peptidoglycan-synthase activator LpoB CAY59_12240 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CAY59_12255 PF01230 HIT domain CAY59_12260 PF00672 HAMP domain CAY59_12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_12270 PF01048 Phosphorylase superfamily CAY59_12275 PF00403 Heavy-metal-associated domain CAY59_12280 PF01554 MatE CAY59_12285 PF00478 IMP dehydrogenase / GMP reductase domain CAY59_12285 PF00571 CBS domain CAY59_12295 PF00037 4Fe-4S binding domain CAY59_12295 PF11953 Domain of unknown function (DUF3470) CAY59_12300 PF08032 RNA 2'-O ribose methyltransferase substrate binding CAY59_12300 PF00588 SpoU rRNA Methylase family CAY59_12310 PF08448 PAS fold CAY59_12310 PF00990 Diguanylate cyclase, GGDEF domain CAY59_12320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAY59_12325 PF09619 Type III secretion system lipoprotein chaperone (YscW) CAY59_12335 PF01037 Lrp/AsnC ligand binding domain CAY59_12335 PF13404 AsnC-type helix-turn-helix domain CAY59_12340 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_12360 PF00873 AcrB/AcrD/AcrF family CAY59_12365 PF13533 Biotin-lipoyl like CAY59_12410 PF07690 Major Facilitator Superfamily CAY59_12415 PF03601 Conserved hypothetical protein 698 CAY59_12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_12435 PF03466 LysR substrate binding domain CAY59_12440 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAY59_12440 PF00367 phosphotransferase system, EIIB CAY59_12440 PF02378 Phosphotransferase system, EIIC CAY59_12445 PF00501 AMP-binding enzyme CAY59_12445 PF13193 AMP-binding enzyme C-terminal domain CAY59_12450 PF13378 Enolase C-terminal domain-like CAY59_12455 PF00378 Enoyl-CoA hydratase/isomerase CAY59_12460 PF12697 Alpha/beta hydrolase family CAY59_12465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAY59_12465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAY59_12465 PF16582 Middle domain of thiamine pyrophosphate CAY59_12470 PF00425 chorismate binding enzyme CAY59_12475 PF00155 Aminotransferase class I and II CAY59_12485 PF13286 Phosphohydrolase-associated domain CAY59_12485 PF01966 HD domain CAY59_12505 PF13145 PPIC-type PPIASE domain CAY59_12510 PF00216 Bacterial DNA-binding protein CAY59_12515 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_12515 PF05362 Lon protease (S16) C-terminal proteolytic domain CAY59_12515 PF02190 ATP-dependent protease La (LON) substrate-binding domain CAY59_12520 PF07724 AAA domain (Cdc48 subfamily) CAY59_12520 PF10431 C-terminal, D2-small domain, of ClpB protein CAY59_12520 PF06689 ClpX C4-type zinc finger CAY59_12525 PF00574 Clp protease CAY59_12530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAY59_12530 PF05697 Bacterial trigger factor protein (TF) CAY59_12530 PF05698 Bacterial trigger factor protein (TF) C-terminus CAY59_12535 PF02743 Cache domain CAY59_12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_12535 PF00512 His Kinase A (phospho-acceptor) domain CAY59_12540 PF02954 Bacterial regulatory protein, Fis family CAY59_12540 PF00072 Response regulator receiver domain CAY59_12540 PF00158 Sigma-54 interaction domain CAY59_12550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAY59_12555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CAY59_12560 PF03480 Bacterial extracellular solute-binding protein, family 7 CAY59_12565 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CAY59_12580 PF02386 Cation transport protein CAY59_12585 PF02254 TrkA-N domain CAY59_12585 PF02080 TrkA-C domain CAY59_12590 PF00270 DEAD/DEAH box helicase CAY59_12590 PF00271 Helicase conserved C-terminal domain CAY59_12595 PF01595 Cyclin M transmembrane N-terminal domain CAY59_12595 PF03471 Transporter associated domain CAY59_12595 PF00571 CBS domain CAY59_12615 PF00501 AMP-binding enzyme CAY59_12615 PF00501 AMP-binding enzyme CAY59_12615 PF00975 Thioesterase domain CAY59_12615 PF13193 AMP-binding enzyme C-terminal domain CAY59_12615 PF00668 Condensation domain CAY59_12615 PF00550 Phosphopantetheine attachment site CAY59_12615 PF00550 Phosphopantetheine attachment site CAY59_12615 PF13193 AMP-binding enzyme C-terminal domain CAY59_12615 PF00668 Condensation domain CAY59_12615 PF00975 Thioesterase domain CAY59_12620 PF00857 Isochorismatase family CAY59_12620 PF00550 Phosphopantetheine attachment site CAY59_12625 PF00501 AMP-binding enzyme CAY59_12625 PF13193 AMP-binding enzyme C-terminal domain CAY59_12630 PF00425 chorismate binding enzyme CAY59_12665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CAY59_12665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CAY59_12670 PF04480 Protein of unknown function (DUF559) CAY59_12675 PF07670 Nucleoside recognition CAY59_12675 PF07662 Na+ dependent nucleoside transporter C-terminus CAY59_12675 PF01773 Na+ dependent nucleoside transporter N-terminus CAY59_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_12680 PF03466 LysR substrate binding domain CAY59_12685 PF13406 Transglycosylase SLT domain CAY59_12690 PF05166 YcgL domain CAY59_12695 PF05209 Septum formation inhibitor MinC, N-terminal domain CAY59_12695 PF03775 Septum formation inhibitor MinC, C-terminal domain CAY59_12700 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAY59_12705 PF03776 Septum formation topological specificity factor MinE CAY59_12710 PF01612 3'-5' exonuclease CAY59_12710 PF00570 HRDC domain CAY59_12715 PF13193 AMP-binding enzyme C-terminal domain CAY59_12715 PF00501 AMP-binding enzyme CAY59_12720 PF12697 Alpha/beta hydrolase family CAY59_12725 PF03843 Outer membrane lipoprotein Slp family CAY59_12735 PF00814 Glycoprotease family CAY59_12740 PF04851 Type III restriction enzyme, res subunit CAY59_12740 PF13307 Helicase C-terminal domain CAY59_12755 PF00089 Trypsin CAY59_12765 PF06185 YecM protein CAY59_12770 PF03485 Arginyl tRNA synthetase N terminal domain CAY59_12770 PF05746 DALR anticodon binding domain CAY59_12770 PF00750 tRNA synthetases class I (R) CAY59_12790 PF02421 Ferrous iron transport protein B CAY59_12790 PF07670 Nucleoside recognition CAY59_12790 PF07664 Ferrous iron transport protein B C terminus CAY59_12790 PF17910 FeoB cytosolic helical domain CAY59_12795 PF04023 FeoA domain CAY59_12800 PF12833 Helix-turn-helix domain CAY59_12800 PF02311 AraC-like ligand binding domain CAY59_12805 PF01297 Zinc-uptake complex component A periplasmic CAY59_12810 PF00005 ABC transporter CAY59_12815 PF00950 ABC 3 transport family CAY59_12820 PF02629 CoA binding domain CAY59_12820 PF00549 CoA-ligase CAY59_12830 PF00364 Biotin-requiring enzyme CAY59_12830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAY59_12830 PF02817 e3 binding domain CAY59_12835 PF02779 Transketolase, pyrimidine binding domain CAY59_12835 PF16078 2-oxoglutarate dehydrogenase N-terminus CAY59_12835 PF16870 2-oxoglutarate dehydrogenase C-terminal CAY59_12835 PF00676 Dehydrogenase E1 component CAY59_12840 PF13085 2Fe-2S iron-sulfur cluster binding domain CAY59_12845 PF02910 Fumarate reductase flavoprotein C-term CAY59_12845 PF00890 FAD binding domain CAY59_12850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAY59_12855 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CAY59_12860 PF00285 Citrate synthase, C-terminal domain CAY59_12865 PF01784 NIF3 (NGG1p interacting factor 3) CAY59_12880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAY59_12880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAY59_12880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAY59_12880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAY59_12890 PF00561 alpha/beta hydrolase fold CAY59_12900 PF00258 Flavodoxin CAY59_12910 PF01475 Ferric uptake regulator family CAY59_12915 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CAY59_12915 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAY59_12920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAY59_12920 PF00367 phosphotransferase system, EIIB CAY59_12920 PF02378 Phosphotransferase system, EIIC CAY59_12925 PF01979 Amidohydrolase family CAY59_12930 PF01047 MarR family CAY59_12930 PF00480 ROK family CAY59_12935 PF00999 Sodium/hydrogen exchanger family CAY59_12935 PF02254 TrkA-N domain CAY59_12940 PF00733 Asparagine synthase CAY59_12940 PF13537 Glutamine amidotransferase domain CAY59_12945 PF02357 Transcription termination factor nusG CAY59_12950 PF00854 POT family CAY59_12955 PF00762 Ferrochelatase CAY59_12960 PF05191 Adenylate kinase, active site lid CAY59_12965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_12965 PF00183 Hsp90 protein CAY59_12970 PF00486 Transcriptional regulatory protein, C terminal CAY59_12975 PF17323 Trans-membrane regulatory protein ToxS CAY59_12990 PF12850 Calcineurin-like phosphoesterase superfamily domain CAY59_13010 PF07556 Protein of unknown function (DUF1538) CAY59_13015 PF07556 Protein of unknown function (DUF1538) CAY59_13020 PF01370 NAD dependent epimerase/dehydratase family CAY59_13020 PF08338 Domain of unknown function (DUF1731) CAY59_13025 PF00106 short chain dehydrogenase CAY59_13035 PF00085 Thioredoxin CAY59_13040 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CAY59_13045 PF01270 Glycosyl hydrolases family 8 CAY59_13050 PF03170 Bacterial cellulose synthase subunit CAY59_13055 PF00535 Glycosyl transferase family 2 CAY59_13055 PF07238 PilZ domain CAY59_13055 PF03552 Cellulose synthase CAY59_13060 PF06564 Cellulose biosynthesis protein BcsQ CAY59_13075 PF11658 Cellulose biosynthesis protein BcsG CAY59_13080 PF01145 SPFH domain / Band 7 family CAY59_13080 PF16200 C-terminal region of band_7 CAY59_13105 PF01653 NAD-dependent DNA ligase adenylation domain CAY59_13105 PF00533 BRCA1 C Terminus (BRCT) domain CAY59_13105 PF03120 NAD-dependent DNA ligase OB-fold domain CAY59_13105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CAY59_13105 PF12826 Helix-hairpin-helix motif CAY59_13110 PF04354 ZipA, C-terminal FtsZ-binding domain CAY59_13120 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_13130 PF00381 PTS HPr component phosphorylation site CAY59_13135 PF05524 PEP-utilising enzyme, N-terminal CAY59_13135 PF00391 PEP-utilising enzyme, mobile domain CAY59_13135 PF02896 PEP-utilising enzyme, TIM barrel domain CAY59_13140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAY59_13145 PF07196 Flagellin hook IN motif CAY59_13145 PF00669 Bacterial flagellin N-terminal helical region CAY59_13145 PF00700 Bacterial flagellin C-terminal helical region CAY59_13150 PF07196 Flagellin hook IN motif CAY59_13150 PF00669 Bacterial flagellin N-terminal helical region CAY59_13150 PF00700 Bacterial flagellin C-terminal helical region CAY59_13155 PF00669 Bacterial flagellin N-terminal helical region CAY59_13155 PF00700 Bacterial flagellin C-terminal helical region CAY59_13155 PF07196 Flagellin hook IN motif CAY59_13165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_13165 PF07196 Flagellin hook IN motif CAY59_13170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CAY59_13170 PF10135 Rod binding protein CAY59_13175 PF02119 Flagellar P-ring protein CAY59_13180 PF02107 Flagellar L-ring protein CAY59_13185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_13185 PF00460 Flagella basal body rod protein CAY59_13190 PF00460 Flagella basal body rod protein CAY59_13190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_13195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_13195 PF00460 Flagella basal body rod protein CAY59_13195 PF07559 Flagellar basal body protein FlaE CAY59_13200 PF13861 FlgD Tudor-like domain CAY59_13200 PF13860 FlgD Ig-like domain CAY59_13200 PF03963 Flagellar hook capping protein - N-terminal region CAY59_13205 PF00460 Flagella basal body rod protein CAY59_13205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_13210 PF00460 Flagella basal body rod protein CAY59_13215 PF01739 CheR methyltransferase, SAM binding domain CAY59_13215 PF03705 CheR methyltransferase, all-alpha domain CAY59_13220 PF01584 CheW-like domain CAY59_13220 PF00072 Response regulator receiver domain CAY59_13265 PF01389 OmpA-like transmembrane domain CAY59_13265 PF00691 OmpA family CAY59_13280 PF00749 tRNA synthetases class I (E and Q), catalytic domain CAY59_13285 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CAY59_13290 PF13609 Gram-negative porin CAY59_13295 PF00403 Heavy-metal-associated domain CAY59_13310 PF00728 Glycosyl hydrolase family 20, catalytic domain CAY59_13310 PF03173 Putative carbohydrate binding domain CAY59_13310 PF02838 Glycosyl hydrolase family 20, domain 2 CAY59_13310 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CAY59_13330 PF01713 Smr domain CAY59_13335 PF00849 RNA pseudouridylate synthase CAY59_13335 PF01479 S4 domain CAY59_13340 PF04073 Aminoacyl-tRNA editing domain CAY59_13345 PF00149 Calcineurin-like phosphoesterase CAY59_13345 PF02872 5'-nucleotidase, C-terminal domain CAY59_13350 PF00793 DAHP synthetase I family CAY59_13355 PF13369 Transglutaminase-like superfamily CAY59_13360 PF04247 Invasion gene expression up-regulator, SirB CAY59_13365 PF17827 PrmC N-terminal domain CAY59_13365 PF13847 Methyltransferase domain CAY59_13375 PF01488 Shikimate / quinate 5-dehydrogenase CAY59_13375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CAY59_13375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CAY59_13380 PF03550 Outer membrane lipoprotein LolB CAY59_13385 PF08544 GHMP kinases C terminal CAY59_13385 PF00288 GHMP kinases N terminal domain CAY59_13390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CAY59_13390 PF14572 Phosphoribosyl synthetase-associated domain CAY59_13395 PF01195 Peptidyl-tRNA hydrolase CAY59_13400 PF01926 50S ribosome-binding GTPase CAY59_13400 PF06071 Protein of unknown function (DUF933) CAY59_13515 PF01494 FAD binding domain CAY59_13520 PF00919 Uncharacterized protein family UPF0004 CAY59_13520 PF04055 Radical SAM superfamily CAY59_13520 PF01938 TRAM domain CAY59_13525 PF02562 PhoH-like protein CAY59_13530 PF02130 Uncharacterized protein family UPF0054 CAY59_13535 PF00571 CBS domain CAY59_13535 PF03471 Transporter associated domain CAY59_13540 PF00795 Carbon-nitrogen hydrolase CAY59_13545 PF07295 Zinc-ribbon containing domain CAY59_13550 PF00133 tRNA synthetases class I (I, L, M and V) CAY59_13550 PF08264 Anticodon-binding domain of tRNA CAY59_13550 PF13603 Leucyl-tRNA synthetase, Domain 2 CAY59_13555 PF04390 Lipopolysaccharide-assembly CAY59_13560 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CAY59_13560 PF06144 DNA polymerase III, delta subunit CAY59_13570 PF02590 Predicted SPOUT methyltransferase CAY59_13575 PF03717 Penicillin-binding Protein dimerisation domain CAY59_13575 PF00905 Penicillin binding protein transpeptidase domain CAY59_13580 PF01098 Cell cycle protein CAY59_13585 PF05036 Sporulation related domain CAY59_13585 PF03330 Lytic transglycolase CAY59_13590 PF00768 D-alanyl-D-alanine carboxypeptidase CAY59_13590 PF07943 Penicillin-binding protein 5, C-terminal domain CAY59_13595 PF04359 Protein of unknown function (DUF493) CAY59_13600 PF03099 Biotin/lipoate A/B protein ligase family CAY59_13605 PF04055 Radical SAM superfamily CAY59_13605 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CAY59_13610 PF00464 Serine hydroxymethyltransferase CAY59_13615 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAY59_13615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CAY59_13620 PF16657 Maltogenic Amylase, C-terminal domain CAY59_13620 PF00128 Alpha amylase, catalytic domain CAY59_13625 PF02378 Phosphotransferase system, EIIC CAY59_13625 PF00367 phosphotransferase system, EIIB CAY59_13630 PF00356 Bacterial regulatory proteins, lacI family CAY59_13640 PF00005 ABC transporter CAY59_13640 PF09383 NIL domain CAY59_13645 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_13650 PF03180 NLPA lipoprotein CAY59_13660 PF00149 Calcineurin-like phosphoesterase CAY59_13660 PF02872 5'-nucleotidase, C-terminal domain CAY59_13665 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CAY59_13670 PF07348 Syd protein (SUKH-2) CAY59_13675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CAY59_13675 PF14489 QueF-like protein CAY59_13685 PF00990 Diguanylate cyclase, GGDEF domain CAY59_13685 PF00072 Response regulator receiver domain CAY59_13690 PF03641 Possible lysine decarboxylase CAY59_13690 PF11892 Domain of unknown function (DUF3412) CAY59_13690 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CAY59_13695 PF01367 5'-3' exonuclease, C-terminal SAM fold CAY59_13695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAY59_13700 PF18125 RlmM ferredoxin-like domain CAY59_13700 PF01728 FtsJ-like methyltransferase CAY59_13705 PF04241 Protein of unknown function (DUF423) CAY59_13715 PF03466 LysR substrate binding domain CAY59_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_13720 PF02926 THUMP domain CAY59_13720 PF02568 Thiamine biosynthesis protein (ThiI) CAY59_13725 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAY59_13725 PF00691 OmpA family CAY59_13730 PF01618 MotA/TolQ/ExbB proton channel family CAY59_13735 PF02609 Exonuclease VII small subunit CAY59_13740 PF00348 Polyprenyl synthetase CAY59_13745 PF02779 Transketolase, pyrimidine binding domain CAY59_13745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CAY59_13745 PF02780 Transketolase, C-terminal domain CAY59_13750 PF04608 Phosphatidylglycerophosphatase A CAY59_13755 PF02769 AIR synthase related protein, C-terminal domain CAY59_13755 PF00586 AIR synthase related protein, N-terminal domain CAY59_13760 PF01029 NusB family CAY59_13765 PF00885 6,7-dimethyl-8-ribityllumazine synthase CAY59_13770 PF00925 GTP cyclohydrolase II CAY59_13770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAY59_13775 PF00677 Lumazine binding domain CAY59_13780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAY59_13780 PF01872 RibD C-terminal domain CAY59_13785 PF03477 ATP cone domain CAY59_13790 PF00171 Aldehyde dehydrogenase family CAY59_13795 PF00696 Amino acid kinase family CAY59_13795 PF01472 PUA domain CAY59_13800 PF07417 Sigma factor-binding transcriptional regulator Crl CAY59_13810 PF00156 Phosphoribosyl transferase domain CAY59_13815 PF00860 Permease family CAY59_13820 PF07687 Peptidase dimerisation domain CAY59_13820 PF01546 Peptidase family M20/M25/M40 CAY59_13850 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_13850 PF01464 Transglycosylase SLT domain CAY59_13855 PF14437 MafB19-like deaminase CAY59_13865 PF03806 AbgT putative transporter family CAY59_13885 PF07963 Prokaryotic N-terminal methylation motif CAY59_13885 PF00114 Pilin (bacterial filament) CAY59_13890 PF00114 Pilin (bacterial filament) CAY59_13890 PF07963 Prokaryotic N-terminal methylation motif CAY59_13895 PF00226 DnaJ domain CAY59_13895 PF00684 DnaJ central domain CAY59_13895 PF01556 DnaJ C terminal domain CAY59_13900 PF00012 Hsp70 protein CAY59_13910 PF00375 Sodium:dicarboxylate symporter family CAY59_13915 PF01025 GrpE CAY59_13920 PF01513 ATP-NAD kinase CAY59_13925 PF02463 RecF/RecN/SMC N terminal domain CAY59_13930 PF04355 SmpA / OmlA family CAY59_13935 PF03658 RnfH family Ubiquitin CAY59_13940 PF03364 Polyketide cyclase / dehydrase and lipid transport CAY59_13945 PF01668 SmpB protein CAY59_13955 PF13356 Arm DNA-binding domain CAY59_13955 PF00589 Phage integrase family CAY59_13975 PF12161 HsdM N-terminal domain CAY59_13975 PF02384 N-6 DNA Methylase CAY59_13980 PF01420 Type I restriction modification DNA specificity domain CAY59_13985 PF18766 SWI2/SNF2 ATPase CAY59_13985 PF11867 Domain of unknown function (DUF3387) CAY59_13985 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CAY59_13995 PF07728 AAA domain (dynein-related subfamily) CAY59_13995 PF12102 Domain of unknown function (DUF3578) CAY59_14005 PF00239 Resolvase, N terminal domain CAY59_14005 PF02796 Helix-turn-helix domain of resolvase CAY59_14075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_14075 PF03466 LysR substrate binding domain CAY59_14080 PF12805 FUSC-like inner membrane protein yccS CAY59_14100 PF00202 Aminotransferase class-III CAY59_14105 PF07969 Amidohydrolase family CAY59_14120 PF12729 Four helix bundle sensory module for signal transduction CAY59_14120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_14120 PF00672 HAMP domain CAY59_14125 PF03466 LysR substrate binding domain CAY59_14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_14130 PF01266 FAD dependent oxidoreductase CAY59_14135 PF01235 Sodium:alanine symporter family CAY59_14140 PF01184 GPR1/FUN34/yaaH family CAY59_14145 PF00704 Glycosyl hydrolases family 18 CAY59_14145 PF06483 Chitinase C CAY59_14150 PF03553 Na+/H+ antiporter family CAY59_14155 PF02540 NAD synthase CAY59_14155 PF00117 Glutamine amidotransferase class-I CAY59_14155 PF00958 GMP synthase C terminal domain CAY59_14160 PF00478 IMP dehydrogenase / GMP reductase domain CAY59_14160 PF00571 CBS domain CAY59_14165 PF13742 OB-fold nucleic acid binding domain CAY59_14165 PF02601 Exonuclease VII, large subunit CAY59_14175 PF13185 GAF domain CAY59_14175 PF00990 Diguanylate cyclase, GGDEF domain CAY59_14185 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CAY59_14185 PF01926 50S ribosome-binding GTPase CAY59_14190 PF13360 PQQ-like domain CAY59_14195 PF09976 Tetratricopeptide repeat-like domain CAY59_14200 PF03129 Anticodon binding domain CAY59_14200 PF13393 Histidyl-tRNA synthetase CAY59_14205 PF04551 GcpE protein CAY59_14210 PF13464 Domain of unknown function (DUF4115) CAY59_14215 PF04055 Radical SAM superfamily CAY59_14220 PF00334 Nucleoside diphosphate kinase CAY59_14225 PF00883 Cytosol aminopeptidase family, catalytic domain CAY59_14225 PF12404 Peptidase CAY59_14230 PF04384 Iron-sulphur cluster assembly CAY59_14235 PF00111 2Fe-2S iron-sulfur cluster binding domain CAY59_14240 PF00012 Hsp70 protein CAY59_14245 PF00226 DnaJ domain CAY59_14245 PF07743 HSCB C-terminal oligomerisation domain CAY59_14250 PF01521 Iron-sulphur cluster biosynthesis CAY59_14255 PF01592 NifU-like N terminal domain CAY59_14260 PF00266 Aminotransferase class-V CAY59_14265 PF02082 Transcriptional regulator CAY59_14270 PF00588 SpoU rRNA Methylase family CAY59_14275 PF00459 Inositol monophosphatase family CAY59_14280 PF02355 Protein export membrane protein CAY59_14280 PF07549 SecD/SecF GG Motif CAY59_14285 PF07549 SecD/SecF GG Motif CAY59_14285 PF02355 Protein export membrane protein CAY59_14285 PF13721 SecD export protein N-terminal TM region CAY59_14290 PF02699 Preprotein translocase subunit CAY59_14295 PF01702 Queuine tRNA-ribosyltransferase CAY59_14300 PF02547 Queuosine biosynthesis protein CAY59_14315 PF00571 CBS domain CAY59_14320 PF00463 Isocitrate lyase family CAY59_14325 PF01274 Malate synthase CAY59_14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_14330 PF03466 LysR substrate binding domain CAY59_14335 PF10417 C-terminal domain of 1-Cys peroxiredoxin CAY59_14335 PF00578 AhpC/TSA family CAY59_14345 PF03976 Polyphosphate kinase 2 (PPK2) CAY59_14350 PF03466 LysR substrate binding domain CAY59_14350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_14360 PF01895 PhoU domain CAY59_14365 PF00005 ABC transporter CAY59_14370 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_14375 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_14380 PF02503 Polyphosphate kinase middle domain CAY59_14380 PF13090 Polyphosphate kinase C-terminal domain 2 CAY59_14380 PF17941 Polyphosphate kinase C-terminal domain 1 CAY59_14380 PF13089 Polyphosphate kinase N-terminal domain CAY59_14385 PF02541 Ppx/GppA phosphatase family CAY59_14400 PF00072 Response regulator receiver domain CAY59_14400 PF00486 Transcriptional regulatory protein, C terminal CAY59_14410 PF04381 Putative exonuclease, RdgC CAY59_14420 PF00037 4Fe-4S binding domain CAY59_14430 PF03411 Penicillin-insensitive murein endopeptidase CAY59_14475 PF02861 Clp amino terminal domain, pathogenicity island component CAY59_14475 PF17871 AAA lid domain CAY59_14475 PF07724 AAA domain (Cdc48 subfamily) CAY59_14475 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_14475 PF10431 C-terminal, D2-small domain, of ClpB protein CAY59_14485 PF00849 RNA pseudouridylate synthase CAY59_14485 PF01479 S4 domain CAY59_14490 PF13525 Outer membrane lipoprotein CAY59_14495 PF01464 Transglycosylase SLT domain CAY59_14500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CAY59_14505 PF00800 Prephenate dehydratase CAY59_14505 PF01817 Chorismate mutase type II CAY59_14510 PF01931 Protein of unknown function DUF84 CAY59_14515 PF01371 Trp repressor protein CAY59_14520 PF01464 Transglycosylase SLT domain CAY59_14520 PF14718 Soluble lytic murein transglycosylase L domain CAY59_14525 PF12848 ABC transporter CAY59_14525 PF00005 ABC transporter CAY59_14530 PF07238 PilZ domain CAY59_14535 PF01551 Peptidase family M23 CAY59_14535 PF04225 Opacity-associated protein A LysM-like domain CAY59_14540 PF02153 Prephenate dehydrogenase CAY59_14540 PF01817 Chorismate mutase type II CAY59_14545 PF00793 DAHP synthetase I family CAY59_14550 PF00933 Glycosyl hydrolase family 3 N terminal domain CAY59_14555 PF03702 Anhydro-N-acetylmuramic acid kinase CAY59_14560 PF01380 SIS domain CAY59_14575 PF02554 Carbon starvation protein CstA CAY59_14580 PF07694 5TMR of 5TMR-LYT CAY59_14580 PF06580 Histidine kinase CAY59_14585 PF00072 Response regulator receiver domain CAY59_14585 PF04397 LytTr DNA-binding domain CAY59_14590 PF02401 LytB protein CAY59_14595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAY59_14600 PF01252 Signal peptidase (SPase) II CAY59_14605 PF00133 tRNA synthetases class I (I, L, M and V) CAY59_14605 PF06827 Zinc finger found in FPG and IleRS CAY59_14605 PF08264 Anticodon-binding domain of tRNA CAY59_14610 PF01687 Riboflavin kinase CAY59_14610 PF06574 FAD synthetase CAY59_14615 PF03023 Lipid II flippase MurJ CAY59_14620 PF01649 Ribosomal protein S20 CAY59_14625 PF01022 Bacterial regulatory protein, arsR family CAY59_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_14630 PF03466 LysR substrate binding domain CAY59_14635 PF02690 Na+/Pi-cotransporter CAY59_14645 PF00303 Thymidylate synthase CAY59_14650 PF01790 Prolipoprotein diacylglyceryl transferase CAY59_14655 PF01925 Sulfite exporter TauE/SafE CAY59_14665 PF00293 NUDIX domain CAY59_14670 PF02976 DNA mismatch repair enzyme MutH CAY59_14680 PF00248 Aldo/keto reductase family CAY59_14690 PF02954 Bacterial regulatory protein, Fis family CAY59_14690 PF00158 Sigma-54 interaction domain CAY59_14690 PF00072 Response regulator receiver domain CAY59_14695 PF00152 tRNA synthetases class II (D, K and N) CAY59_14695 PF01336 OB-fold nucleic acid binding domain CAY59_14705 PF01368 DHH family CAY59_14705 PF02272 DHHA1 domain CAY59_14705 PF17768 RecJ OB domain CAY59_14710 PF10411 Disulfide bond isomerase protein N-terminus CAY59_14710 PF13098 Thioredoxin-like domain CAY59_14715 PF00589 Phage integrase family CAY59_14715 PF02899 Phage integrase, N-terminal SAM-like domain CAY59_14720 PF00258 Flavodoxin CAY59_14725 PF05525 Branched-chain amino acid transport protein CAY59_14730 PF05175 Methyltransferase small domain CAY59_14735 PF00271 Helicase conserved C-terminal domain CAY59_14735 PF00270 DEAD/DEAH box helicase CAY59_14745 PF03883 Peroxide stress protein YaaA CAY59_14750 PF01235 Sodium:alanine symporter family CAY59_14765 PF03167 Uracil DNA glycosylase superfamily CAY59_14770 PF01261 Xylose isomerase-like TIM barrel CAY59_14775 PF01228 Glycine radical CAY59_14785 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_14785 PF14821 Threonine synthase N terminus CAY59_14790 PF00288 GHMP kinases N terminal domain CAY59_14790 PF08544 GHMP kinases C terminal CAY59_14795 PF00696 Amino acid kinase family CAY59_14795 PF01842 ACT domain CAY59_14795 PF13840 ACT domain CAY59_14795 PF00742 Homoserine dehydrogenase CAY59_14795 PF03447 Homoserine dehydrogenase, NAD binding domain CAY59_14805 PF03737 Aldolase/RraA CAY59_14815 PF00072 Response regulator receiver domain CAY59_14815 PF00486 Transcriptional regulatory protein, C terminal CAY59_14835 PF00563 EAL domain CAY59_14835 PF00360 Phytochrome region CAY59_14835 PF00990 Diguanylate cyclase, GGDEF domain CAY59_14835 PF01590 GAF domain CAY59_14840 PF04055 Radical SAM superfamily CAY59_14840 PF16199 Radical_SAM C-terminal domain CAY59_14850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CAY59_14850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_14855 PF01493 GXGXG motif CAY59_14855 PF04898 Glutamate synthase central domain CAY59_14855 PF00310 Glutamine amidotransferases class-II CAY59_14855 PF01645 Conserved region in glutamate synthase CAY59_14860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CAY59_14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_14870 PF01048 Phosphorylase superfamily CAY59_14880 PF01497 Periplasmic binding protein CAY59_14885 PF03458 UPF0126 domain CAY59_14890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_14890 PF03466 LysR substrate binding domain CAY59_14895 PF01925 Sulfite exporter TauE/SafE CAY59_14915 PF02142 MGS-like domain CAY59_14915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAY59_14915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAY59_14920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CAY59_14920 PF00117 Glutamine amidotransferase class-I CAY59_14925 PF01113 Dihydrodipicolinate reductase, N-terminus CAY59_14925 PF05173 Dihydrodipicolinate reductase, C-terminus CAY59_14930 PF00293 NUDIX domain CAY59_14945 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CAY59_14950 PF12327 FtsZ family, C-terminal domain CAY59_14950 PF00091 Tubulin/FtsZ family, GTPase domain CAY59_14955 PF02491 SHS2 domain inserted in FTSA CAY59_14960 PF03799 Cell division protein FtsQ CAY59_14960 PF08478 POTRA domain, FtsQ-type CAY59_14965 PF01225 Mur ligase family, catalytic domain CAY59_14965 PF02875 Mur ligase family, glutamate ligase domain CAY59_14965 PF08245 Mur ligase middle domain CAY59_14970 PF04101 Glycosyltransferase family 28 C-terminal domain CAY59_14970 PF03033 Glycosyltransferase family 28 N-terminal domain CAY59_14975 PF01098 Cell cycle protein CAY59_14980 PF02875 Mur ligase family, glutamate ligase domain CAY59_14980 PF08245 Mur ligase middle domain CAY59_14985 PF00953 Glycosyl transferase family 4 CAY59_14985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CAY59_14990 PF02875 Mur ligase family, glutamate ligase domain CAY59_14990 PF01225 Mur ligase family, catalytic domain CAY59_14990 PF08245 Mur ligase middle domain CAY59_14995 PF08245 Mur ligase middle domain CAY59_14995 PF01225 Mur ligase family, catalytic domain CAY59_14995 PF02875 Mur ligase family, glutamate ligase domain CAY59_15000 PF03717 Penicillin-binding Protein dimerisation domain CAY59_15000 PF00905 Penicillin binding protein transpeptidase domain CAY59_15005 PF04999 Cell division protein FtsL CAY59_15010 PF01795 MraW methylase family CAY59_15020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAY59_15025 PF04348 LppC putative lipoprotein CAY59_15030 PF02021 Uncharacterised protein family UPF0102 CAY59_15035 PF13580 SIS domain CAY59_15040 PF04972 BON domain CAY59_15045 PF04386 Stringent starvation protein B CAY59_15050 PF02798 Glutathione S-transferase, N-terminal domain CAY59_15050 PF00043 Glutathione S-transferase, C-terminal domain CAY59_15055 PF02167 Cytochrome C1 family CAY59_15060 PF00033 Cytochrome b/b6/petB CAY59_15060 PF00032 Cytochrome b(C-terminal)/b6/petD CAY59_15065 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CAY59_15065 PF00355 Rieske [2Fe-2S] domain CAY59_15070 PF00380 Ribosomal protein S9/S16 CAY59_15075 PF00572 Ribosomal protein L13 CAY59_15080 PF03969 AFG1-like ATPase CAY59_15085 PF06295 Protein of unknown function (DUF1043) CAY59_15090 PF00595 PDZ domain CAY59_15095 PF13180 PDZ domain CAY59_15100 PF00521 DNA gyrase/topoisomerase IV, subunit A CAY59_15100 PF03989 DNA gyrase C-terminal domain, beta-propeller CAY59_15105 PF00204 DNA gyrase B CAY59_15105 PF01751 Toprim domain CAY59_15105 PF00986 DNA gyrase B subunit, carboxyl terminus CAY59_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_15110 PF05728 Uncharacterised protein family (UPF0227) CAY59_15115 PF00149 Calcineurin-like phosphoesterase CAY59_15120 PF06853 Protein of unknown function (DUF1249) CAY59_15125 PF00293 NUDIX domain CAY59_15130 PF02321 Outer membrane efflux protein CAY59_15135 PF01467 Cytidylyltransferase-like CAY59_15135 PF00294 pfkB family carbohydrate kinase CAY59_15145 PF02743 Cache domain CAY59_15145 PF00672 HAMP domain CAY59_15145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_15150 PF07885 Ion channel CAY59_15155 PF01928 CYTH domain CAY59_15160 PF01865 Protein of unknown function DUF47 CAY59_15165 PF01384 Phosphate transporter family CAY59_15170 PF08239 Bacterial SH3 domain CAY59_15185 PF13401 AAA domain CAY59_15185 PF01471 Putative peptidoglycan binding domain CAY59_15190 PF01743 Poly A polymerase head domain CAY59_15190 PF01966 HD domain CAY59_15190 PF12627 Probable RNA and SrmB- binding site of polymerase A CAY59_15195 PF02673 Bacitracin resistance protein BacA CAY59_15200 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CAY59_15205 PF02152 Dihydroneopterin aldolase CAY59_15210 PF02660 Glycerol-3-phosphate acyltransferase CAY59_15215 PF12697 Alpha/beta hydrolase family CAY59_15220 PF00814 Glycoprotease family CAY59_15225 PF01165 Ribosomal protein S21 CAY59_15230 PF09424 Yqey-like protein CAY59_15240 PF04545 Sigma-70, region 4 CAY59_15240 PF04542 Sigma-70 region 2 CAY59_15240 PF04539 Sigma-70 region 3 CAY59_15240 PF00140 Sigma-70 factor, region 1.2 CAY59_15240 PF04546 Sigma-70, non-essential region CAY59_15240 PF03979 Sigma-70 factor, region 1.1 CAY59_15275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAY59_15275 PF02378 Phosphotransferase system, EIIC CAY59_15275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAY59_15280 PF01232 Mannitol dehydrogenase Rossmann domain CAY59_15280 PF08125 Mannitol dehydrogenase C-terminal domain CAY59_15285 PF05068 Mannitol repressor CAY59_15290 PF13419 Haloacid dehalogenase-like hydrolase CAY59_15300 PF00072 Response regulator receiver domain CAY59_15300 PF00486 Transcriptional regulatory protein, C terminal CAY59_15315 PF01380 SIS domain CAY59_15320 PF00455 DeoR C terminal sensor domain CAY59_15320 PF08220 DeoR-like helix-turn-helix domain CAY59_15325 PF00224 Pyruvate kinase, barrel domain CAY59_15325 PF02887 Pyruvate kinase, alpha/beta domain CAY59_15335 PF00990 Diguanylate cyclase, GGDEF domain CAY59_15335 PF17158 Membrane-associated sensor, integral membrane domain CAY59_15340 PF10369 Small subunit of acetolactate synthase CAY59_15345 PF00205 Thiamine pyrophosphate enzyme, central domain CAY59_15345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAY59_15345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAY59_15350 PF00501 AMP-binding enzyme CAY59_15355 PF03466 LysR substrate binding domain CAY59_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_15365 PF01569 PAP2 superfamily CAY59_15380 PF00682 HMGL-like CAY59_15380 PF08502 LeuA allosteric (dimerisation) domain CAY59_15385 PF00180 Isocitrate/isopropylmalate dehydrogenase CAY59_15390 PF00330 Aconitase family (aconitate hydratase) CAY59_15395 PF00694 Aconitase C-terminal domain CAY59_15405 PF00226 DnaJ domain CAY59_15405 PF05099 Tellurite resistance protein TerB CAY59_15410 PF04453 LPS transport system D CAY59_15410 PF03968 OstA-like protein CAY59_15415 PF09312 SurA N-terminal domain CAY59_15420 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CAY59_15425 PF00398 Ribosomal RNA adenine dimethylase CAY59_15430 PF04379 ApaG domain CAY59_15435 PF00149 Calcineurin-like phosphoesterase CAY59_15440 PF00186 Dihydrofolate reductase CAY59_15445 PF12821 Threonine/Serine exporter, ThrE CAY59_15450 PF06738 Putative threonine/serine exporter CAY59_15455 PF01926 50S ribosome-binding GTPase CAY59_15455 PF01018 GTP1/OBG CAY59_15460 PF01016 Ribosomal L27 protein CAY59_15465 PF00829 Ribosomal prokaryotic L21 protein CAY59_15470 PF00348 Polyprenyl synthetase CAY59_15480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CAY59_15480 PF00056 lactate/malate dehydrogenase, NAD binding domain CAY59_15485 PF01316 Arginine repressor, DNA binding domain CAY59_15485 PF02863 Arginine repressor, C-terminal domain CAY59_15490 PF16868 NMT1-like family CAY59_15505 PF00005 ABC transporter CAY59_15510 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_15520 PF02441 Flavoprotein CAY59_15525 PF01225 Mur ligase family, catalytic domain CAY59_15525 PF08245 Mur ligase middle domain CAY59_15525 PF02875 Mur ligase family, glutamate ligase domain CAY59_15530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CAY59_15535 PF00719 Inorganic pyrophosphatase CAY59_15550 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CAY59_15555 PF04357 TamB, inner membrane protein subunit of TAM complex CAY59_15560 PF01103 Surface antigen CAY59_15560 PF17243 POTRA domain TamA domain 1 CAY59_15560 PF07244 Surface antigen variable number repeat CAY59_15565 PF01625 Peptide methionine sulfoxide reductase CAY59_15575 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CAY59_15580 PF10795 Protein of unknown function (DUF2607) CAY59_15590 PF00005 ABC transporter CAY59_15615 PF02080 TrkA-C domain CAY59_15615 PF03600 Citrate transporter CAY59_15620 PF00009 Elongation factor Tu GTP binding domain CAY59_15625 PF01507 Phosphoadenosine phosphosulfate reductase family CAY59_15630 PF14824 Sirohaem biosynthesis protein central CAY59_15630 PF10414 Sirohaem synthase dimerisation region CAY59_15630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAY59_15635 PF02872 5'-nucleotidase, C-terminal domain CAY59_15635 PF00149 Calcineurin-like phosphoesterase CAY59_15645 PF00270 DEAD/DEAH box helicase CAY59_15645 PF03880 DbpA RNA binding domain CAY59_15645 PF00271 Helicase conserved C-terminal domain CAY59_15650 PF13673 Acetyltransferase (GNAT) domain CAY59_15665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAY59_15665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAY59_15675 PF01196 Ribosomal protein L17 CAY59_15680 PF01000 RNA polymerase Rpb3/RpoA insert domain CAY59_15680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CAY59_15680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CAY59_15685 PF00163 Ribosomal protein S4/S9 N-terminal domain CAY59_15685 PF01479 S4 domain CAY59_15690 PF00411 Ribosomal protein S11 CAY59_15695 PF00416 Ribosomal protein S13/S18 CAY59_15700 PF00444 Ribosomal protein L36 CAY59_15705 PF00344 SecY translocase CAY59_15710 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CAY59_15715 PF00327 Ribosomal protein L30p/L7e CAY59_15720 PF00333 Ribosomal protein S5, N-terminal domain CAY59_15720 PF03719 Ribosomal protein S5, C-terminal domain CAY59_15725 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CAY59_15730 PF00347 Ribosomal protein L6 CAY59_15735 PF00410 Ribosomal protein S8 CAY59_15740 PF00253 Ribosomal protein S14p/S29e CAY59_15745 PF00281 Ribosomal protein L5 CAY59_15745 PF00673 ribosomal L5P family C-terminus CAY59_15750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CAY59_15750 PF00467 KOW motif CAY59_15755 PF00238 Ribosomal protein L14p/L23e CAY59_15760 PF00366 Ribosomal protein S17 CAY59_15765 PF00831 Ribosomal L29 protein CAY59_15770 PF00252 Ribosomal protein L16p/L10e CAY59_15775 PF00189 Ribosomal protein S3, C-terminal domain CAY59_15775 PF07650 KH domain CAY59_15780 PF00237 Ribosomal protein L22p/L17e CAY59_15785 PF00203 Ribosomal protein S19 CAY59_15790 PF00181 Ribosomal Proteins L2, RNA binding domain CAY59_15790 PF03947 Ribosomal Proteins L2, C-terminal domain CAY59_15795 PF00276 Ribosomal protein L23 CAY59_15800 PF00573 Ribosomal protein L4/L1 family CAY59_15805 PF00297 Ribosomal protein L3 CAY59_15810 PF00338 Ribosomal protein S10p/S20e CAY59_15815 PF01197 Ribosomal protein L31 CAY59_15820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CAY59_15820 PF00271 Helicase conserved C-terminal domain CAY59_15820 PF17764 3′ DNA-binding domain (3′BD) CAY59_15820 PF18074 Primosomal protein N C-terminal domain CAY59_15820 PF00270 DEAD/DEAH box helicase CAY59_15825 PF00356 Bacterial regulatory proteins, lacI family CAY59_15835 PF00227 Proteasome subunit CAY59_15845 PF01040 UbiA prenyltransferase family CAY59_15850 PF03737 Aldolase/RraA CAY59_15855 PF06005 Cell division protein ZapB CAY59_15860 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CAY59_15865 PF08220 DeoR-like helix-turn-helix domain CAY59_15865 PF00455 DeoR C terminal sensor domain CAY59_15885 PF00121 Triosephosphate isomerase CAY59_15890 PF01370 NAD dependent epimerase/dehydratase family CAY59_15895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAY59_15895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAY59_15895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAY59_15905 PF02719 Polysaccharide biosynthesis protein CAY59_15910 PF02397 Bacterial sugar transferase CAY59_15915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAY59_15930 PF02350 UDP-N-acetylglucosamine 2-epimerase CAY59_15935 PF01370 NAD dependent epimerase/dehydratase family CAY59_15940 PF02719 Polysaccharide biosynthesis protein CAY59_15940 PF08485 Polysaccharide biosynthesis protein C-terminal CAY59_15965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CAY59_15965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CAY59_15965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CAY59_15970 PF02350 UDP-N-acetylglucosamine 2-epimerase CAY59_15975 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CAY59_15975 PF00753 Metallo-beta-lactamase superfamily CAY59_15975 PF10996 Beta-Casp domain CAY59_15980 PF00953 Glycosyl transferase family 4 CAY59_15985 PF01238 Phosphomannose isomerase type I CAY59_15990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAY59_15990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAY59_15990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAY59_15990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAY59_15995 PF00483 Nucleotidyl transferase CAY59_15995 PF01050 Mannose-6-phosphate isomerase CAY59_16020 PF00535 Glycosyl transferase family 2 CAY59_16045 PF02563 Polysaccharide biosynthesis/export protein CAY59_16045 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CAY59_16045 PF10531 SLBB domain CAY59_16070 PF06082 Exopolysaccharide biosynthesis protein YbjH CAY59_16075 PF01370 NAD dependent epimerase/dehydratase family CAY59_16080 PF03279 Bacterial lipid A biosynthesis acyltransferase CAY59_16085 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CAY59_16090 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CAY59_16095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CAY59_16100 PF12464 Maltose acetyltransferase CAY59_16100 PF14602 Hexapeptide repeat of succinyl-transferase CAY59_16105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CAY59_16105 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAY59_16105 PF02142 MGS-like domain CAY59_16110 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CAY59_16115 PF00483 Nucleotidyl transferase CAY59_16120 PF16363 GDP-mannose 4,6 dehydratase CAY59_16130 PF01219 Prokaryotic diacylglycerol kinase CAY59_16135 PF00534 Glycosyl transferases group 1 CAY59_16135 PF13439 Glycosyltransferase Family 4 CAY59_16140 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CAY59_16145 PF05686 Glycosyl transferase family 90 CAY59_16150 PF01467 Cytidylyltransferase-like CAY59_16175 PF00471 Ribosomal protein L33 CAY59_16180 PF00830 Ribosomal L28 family CAY59_16185 PF04002 RadC-like JAB domain CAY59_16190 PF17200 Single Cache domain 2 CAY59_16190 PF00672 HAMP domain CAY59_16190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_16195 PF02441 Flavoprotein CAY59_16195 PF04127 DNA / pantothenate metabolism flavoprotein CAY59_16200 PF00440 Bacterial regulatory proteins, tetR family CAY59_16205 PF03279 Bacterial lipid A biosynthesis acyltransferase CAY59_16220 PF03755 YicC-like family, N-terminal region CAY59_16220 PF08340 Domain of unknown function (DUF1732) CAY59_16225 PF00892 EamA-like transporter family CAY59_16240 PF00005 ABC transporter CAY59_16240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_16245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_16245 PF00005 ABC transporter CAY59_16250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_16255 PF12911 N-terminal TM domain of oligopeptide transport permease C CAY59_16255 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_16260 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_16265 PF00593 TonB dependent receptor CAY59_16265 PF07715 TonB-dependent Receptor Plug Domain CAY59_16280 PF01618 MotA/TolQ/ExbB proton channel family CAY59_16285 PF02472 Biopolymer transport protein ExbD/TolR CAY59_16300 PF00625 Guanylate kinase CAY59_16305 PF01192 RNA polymerase Rpb6 CAY59_16310 PF13291 ACT domain CAY59_16310 PF04607 Region found in RelA / SpoT proteins CAY59_16310 PF02824 TGS domain CAY59_16315 PF00588 SpoU rRNA Methylase family CAY59_16315 PF12105 SpoU, rRNA methylase, C-terminal CAY59_16320 PF00270 DEAD/DEAH box helicase CAY59_16320 PF00271 Helicase conserved C-terminal domain CAY59_16320 PF17191 RecG wedge domain CAY59_16325 PF00326 Prolyl oligopeptidase family CAY59_16330 PF00860 Permease family CAY59_16335 PF00672 HAMP domain CAY59_16335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_16335 PF00512 His Kinase A (phospho-acceptor) domain CAY59_16340 PF00486 Transcriptional regulatory protein, C terminal CAY59_16340 PF00072 Response regulator receiver domain CAY59_16345 PF01272 Transcription elongation factor, GreA/GreB, C-term CAY59_16345 PF03449 Transcription elongation factor, N-terminal CAY59_16355 PF09371 Tex-like protein N-terminal domain CAY59_16355 PF16921 Tex protein YqgF-like domain CAY59_16355 PF00575 S1 RNA binding domain CAY59_16355 PF17674 HHH domain CAY59_16365 PF00561 alpha/beta hydrolase fold CAY59_16370 PF00156 Phosphoribosyl transferase domain CAY59_16375 PF01521 Iron-sulphur cluster biosynthesis CAY59_16375 PF01106 NifU-like domain CAY59_16380 PF00293 NUDIX domain CAY59_16385 PF00459 Inositol monophosphatase family CAY59_16390 PF01203 Type II secretion system (T2SS), protein N CAY59_16395 PF04612 Type II secretion system (T2SS), protein M CAY59_16400 PF12693 GspL periplasmic domain CAY59_16400 PF05134 Type II secretion system (T2SS), protein L CAY59_16405 PF03934 Type II secretion system (T2SS), protein K CAY59_16410 PF11612 Type II secretion system (T2SS), protein J CAY59_16410 PF07963 Prokaryotic N-terminal methylation motif CAY59_16415 PF02501 Type II secretion system (T2SS), protein I CAY59_16415 PF07963 Prokaryotic N-terminal methylation motif CAY59_16420 PF12019 Type II transport protein GspH CAY59_16425 PF07963 Prokaryotic N-terminal methylation motif CAY59_16425 PF08334 Type II secretion system (T2SS), protein G CAY59_16430 PF00482 Type II secretion system (T2SS), protein F CAY59_16435 PF00437 Type II/IV secretion system protein CAY59_16440 PF03958 Bacterial type II/III secretion system short domain CAY59_16440 PF00263 Bacterial type II and III secretion system protein CAY59_16445 PF11356 Type II secretion system protein C CAY59_16450 PF01479 S4 domain CAY59_16455 PF01430 Hsp33 protein CAY59_16460 PF01293 Phosphoenolpyruvate carboxykinase CAY59_16470 PF09500 Putative thioesterase (yiiD_Cterm) CAY59_16470 PF00583 Acetyltransferase (GNAT) family CAY59_16475 PF02580 D-Tyr-tRNA(Tyr) deacylase CAY59_16480 PF03631 Virulence factor BrkB CAY59_16505 PF00120 Glutamine synthetase, catalytic domain CAY59_16505 PF03951 Glutamine synthetase, beta-Grasp domain CAY59_16515 PF00512 His Kinase A (phospho-acceptor) domain CAY59_16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_16515 PF00989 PAS fold CAY59_16520 PF00158 Sigma-54 interaction domain CAY59_16520 PF00072 Response regulator receiver domain CAY59_16520 PF02954 Bacterial regulatory protein, Fis family CAY59_16525 PF03707 Bacterial signalling protein N terminal repeat CAY59_16525 PF00990 Diguanylate cyclase, GGDEF domain CAY59_16525 PF00563 EAL domain CAY59_16525 PF13188 PAS domain CAY59_16530 PF00962 Adenosine/AMP deaminase CAY59_16540 PF10675 Protein of unknown function (DUF2489) CAY59_16545 PF04220 Der GTPase activator (YihI) CAY59_16555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAY59_16560 PF01926 50S ribosome-binding GTPase CAY59_16565 PF01367 5'-3' exonuclease, C-terminal SAM fold CAY59_16565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CAY59_16565 PF00476 DNA polymerase family A CAY59_16565 PF01612 3'-5' exonuclease CAY59_16580 PF00490 Delta-aminolevulinic acid dehydratase CAY59_16585 PF01026 TatD related DNase CAY59_16590 PF00902 Sec-independent protein translocase protein (TatC) CAY59_16595 PF02416 mttA/Hcf106 family CAY59_16600 PF02416 mttA/Hcf106 family CAY59_16605 PF03109 ABC1 family CAY59_16610 PF02036 SCP-2 sterol transfer family CAY59_16615 PF01209 ubiE/COQ5 methyltransferase family CAY59_16630 PF00563 EAL domain CAY59_16630 PF00990 Diguanylate cyclase, GGDEF domain CAY59_16630 PF03707 Bacterial signalling protein N terminal repeat CAY59_16635 PF12728 Helix-turn-helix domain CAY59_16635 PF12727 PBP superfamily domain CAY59_16645 PF04542 Sigma-70 region 2 CAY59_16645 PF04545 Sigma-70, region 4 CAY59_16670 PF01420 Type I restriction modification DNA specificity domain CAY59_16680 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CAY59_16680 PF12008 Type I restriction and modification enzyme - subunit R C terminal CAY59_16680 PF18766 SWI2/SNF2 ATPase CAY59_16755 PF01420 Type I restriction modification DNA specificity domain CAY59_16785 PF00691 OmpA family CAY59_16790 PF02954 Bacterial regulatory protein, Fis family CAY59_16790 PF00158 Sigma-54 interaction domain CAY59_16795 PF10431 C-terminal, D2-small domain, of ClpB protein CAY59_16795 PF17871 AAA lid domain CAY59_16795 PF07724 AAA domain (Cdc48 subfamily) CAY59_16795 PF00004 ATPase family associated with various cellular activities (AAA) CAY59_16800 PF05638 Type VI secretion system effector, Hcp CAY59_16805 PF04717 Type VI secretion system, phage-baseplate injector CAY59_16830 PF00069 Protein kinase domain CAY59_16860 PF01037 Lrp/AsnC ligand binding domain CAY59_16935 PF00593 TonB dependent receptor CAY59_16935 PF07715 TonB-dependent Receptor Plug Domain CAY59_16945 PF00563 EAL domain CAY59_16945 PF00990 Diguanylate cyclase, GGDEF domain CAY59_16945 PF03707 Bacterial signalling protein N terminal repeat CAY59_16950 PF00512 His Kinase A (phospho-acceptor) domain CAY59_16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_16950 PF09456 RcsC Alpha-Beta-Loop (ABL) CAY59_16950 PF00072 Response regulator receiver domain CAY59_16955 PF13188 PAS domain CAY59_16955 PF03707 Bacterial signalling protein N terminal repeat CAY59_16955 PF00990 Diguanylate cyclase, GGDEF domain CAY59_16955 PF00563 EAL domain CAY59_16960 PF00196 Bacterial regulatory proteins, luxR family CAY59_16960 PF00072 Response regulator receiver domain CAY59_16965 PF00990 Diguanylate cyclase, GGDEF domain CAY59_16965 PF17158 Membrane-associated sensor, integral membrane domain CAY59_16970 PF03466 LysR substrate binding domain CAY59_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_16975 PF00072 Response regulator receiver domain CAY59_16975 PF00196 Bacterial regulatory proteins, luxR family CAY59_16980 PF00881 Nitroreductase family CAY59_16990 PF00072 Response regulator receiver domain CAY59_16990 PF01584 CheW-like domain CAY59_16995 PF08334 Type II secretion system (T2SS), protein G CAY59_16995 PF07963 Prokaryotic N-terminal methylation motif CAY59_17005 PF00892 EamA-like transporter family CAY59_17020 PF01569 PAP2 superfamily CAY59_17035 PF03413 Peptidase propeptide and YPEB domain CAY59_17035 PF01447 Thermolysin metallopeptidase, catalytic domain CAY59_17035 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_17035 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAY59_17035 PF07504 Fungalysin/Thermolysin Propeptide Motif CAY59_17040 PF00893 Small Multidrug Resistance protein CAY59_17045 PF00892 EamA-like transporter family CAY59_17065 PF00171 Aldehyde dehydrogenase family CAY59_17075 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAY59_17080 PF00753 Metallo-beta-lactamase superfamily CAY59_17090 PF01645 Conserved region in glutamate synthase CAY59_17090 PF13187 4Fe-4S dicluster domain CAY59_17105 PF01757 Acyltransferase family CAY59_17115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAY59_17120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_17150 PF03793 PASTA domain CAY59_17150 PF00069 Protein kinase domain CAY59_17170 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAY59_17170 PF00691 OmpA family CAY59_17240 PF04717 Type VI secretion system, phage-baseplate injector CAY59_17255 PF03527 RHS protein CAY59_17275 PF12320 Type 5 capsule protein repressor C-terminal domain CAY59_17275 PF00149 Calcineurin-like phosphoesterase CAY59_17280 PF13476 AAA domain CAY59_17290 PF00704 Glycosyl hydrolases family 18 CAY59_17320 PF08212 Lipocalin-like domain CAY59_17330 PF07690 Major Facilitator Superfamily CAY59_17340 PF03606 C4-dicarboxylate anaerobic carrier CAY59_17345 PF00034 Cytochrome c CAY59_17350 PF01212 Beta-eliminating lyase CAY59_17360 PF17868 AAA lid domain CAY59_17360 PF12592 Protein of unknown function (DUF3763) CAY59_17360 PF07728 AAA domain (dynein-related subfamily) CAY59_17365 PF05762 VWA domain containing CoxE-like protein CAY59_17380 PF00933 Glycosyl hydrolase family 3 N terminal domain CAY59_17380 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAY59_17380 PF14310 Fibronectin type III-like domain CAY59_17385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_17385 PF03466 LysR substrate binding domain CAY59_17400 PF13462 Thioredoxin CAY59_17425 PF09154 Domain of unknown function (DUF1939) CAY59_17425 PF00128 Alpha amylase, catalytic domain CAY59_17475 PF00990 Diguanylate cyclase, GGDEF domain CAY59_17475 PF17156 Gammaproteobacterial periplasmic sensor domain CAY59_17480 PF01156 Inosine-uridine preferring nucleoside hydrolase CAY59_17485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_17485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAY59_17485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAY59_17485 PF04324 BFD-like [2Fe-2S] binding domain CAY59_17485 PF18267 Rubredoxin NAD+ reductase C-terminal domain CAY59_17490 PF13806 Rieske-like [2Fe-2S] domain CAY59_17495 PF01226 Formate/nitrite transporter CAY59_17500 PF10414 Sirohaem synthase dimerisation region CAY59_17500 PF14824 Sirohaem biosynthesis protein central CAY59_17500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAY59_17515 PF03605 Anaerobic c4-dicarboxylate membrane transporter CAY59_17535 PF11756 Nitrous oxide-stimulated promoter CAY59_17540 PF01554 MatE CAY59_17550 PF07690 Major Facilitator Superfamily CAY59_17555 PF00085 Thioredoxin CAY59_17560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CAY59_17560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CAY59_17585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_17585 PF00529 HlyD membrane-fusion protein of T1SS CAY59_17605 PF01238 Phosphomannose isomerase type I CAY59_17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_17615 PF07730 Histidine kinase CAY59_17615 PF05231 MASE1 CAY59_17620 PF00072 Response regulator receiver domain CAY59_17620 PF00196 Bacterial regulatory proteins, luxR family CAY59_17625 PF07690 Major Facilitator Superfamily CAY59_17660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CAY59_17660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_17685 PF03477 ATP cone domain CAY59_17685 PF13597 Anaerobic ribonucleoside-triphosphate reductase CAY59_17695 PF01554 MatE CAY59_17700 PF12833 Helix-turn-helix domain CAY59_17705 PF00155 Aminotransferase class I and II CAY59_17720 PF04076 Bacterial OB fold (BOF) protein CAY59_17725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAY59_17725 PF07685 CobB/CobQ-like glutamine amidotransferase domain CAY59_17735 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_17740 PF03459 TOBE domain CAY59_17740 PF00005 ABC transporter CAY59_17750 PF01590 GAF domain CAY59_17750 PF00360 Phytochrome region CAY59_17750 PF00990 Diguanylate cyclase, GGDEF domain CAY59_17750 PF00563 EAL domain CAY59_17755 PF00990 Diguanylate cyclase, GGDEF domain CAY59_17755 PF00072 Response regulator receiver domain CAY59_17770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CAY59_17770 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CAY59_17770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CAY59_17775 PF02233 NAD(P) transhydrogenase beta subunit CAY59_17785 PF00072 Response regulator receiver domain CAY59_17785 PF00486 Transcriptional regulatory protein, C terminal CAY59_17800 PF03701 Uncharacterised protein family (UPF0181) CAY59_17890 PF01253 Translation initiation factor SUI1 CAY59_17900 PF01820 D-ala D-ala ligase N-terminus CAY59_17900 PF07478 D-ala D-ala ligase C-terminus CAY59_17905 PF05036 Sporulation related domain CAY59_17910 PF13607 Succinyl-CoA ligase like flavodoxin domain CAY59_17910 PF00583 Acetyltransferase (GNAT) family CAY59_17910 PF13380 CoA binding domain CAY59_17915 PF03466 LysR substrate binding domain CAY59_17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_17920 PF07715 TonB-dependent Receptor Plug Domain CAY59_17920 PF04886 PT repeat CAY59_17920 PF00593 TonB dependent receptor CAY59_17925 PF16363 GDP-mannose 4,6 dehydratase CAY59_17935 PF03746 LamB/YcsF family CAY59_17940 PF02682 Carboxyltransferase domain, subdomain C and D CAY59_17945 PF02626 Carboxyltransferase domain, subdomain A and B CAY59_17960 PF00005 ABC transporter CAY59_17965 PF13472 GDSL-like Lipase/Acylhydrolase family CAY59_17970 PF12241 Trans-2-enoyl-CoA reductase catalytic region CAY59_17970 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CAY59_17970 PF07055 Enoyl reductase FAD binding domain CAY59_17975 PF00990 Diguanylate cyclase, GGDEF domain CAY59_17975 PF03707 Bacterial signalling protein N terminal repeat CAY59_17975 PF13188 PAS domain CAY59_17975 PF00563 EAL domain CAY59_17985 PF00684 DnaJ central domain CAY59_17985 PF01556 DnaJ C terminal domain CAY59_17985 PF00226 DnaJ domain CAY59_18010 PF12793 Sugar transport-related sRNA regulator N-term CAY59_18010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_18020 PF03061 Thioesterase superfamily CAY59_18025 PF01435 Peptidase family M48 CAY59_18035 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAY59_18040 PF12262 Bacterial virulence factor lipase N-terminal CAY59_18055 PF02574 Homocysteine S-methyltransferase CAY59_18055 PF00809 Pterin binding enzyme CAY59_18055 PF02310 B12 binding domain CAY59_18055 PF02607 B12 binding domain CAY59_18055 PF02965 Vitamin B12 dependent methionine synthase, activation domain CAY59_18065 PF03741 Integral membrane protein TerC family CAY59_18070 PF00149 Calcineurin-like phosphoesterase CAY59_18070 PF02872 5'-nucleotidase, C-terminal domain CAY59_18075 PF11398 Protein of unknown function (DUF2813) CAY59_18080 PF06496 Protein of unknown function (DUF1097) CAY59_18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_18085 PF03466 LysR substrate binding domain CAY59_18095 PF01226 Formate/nitrite transporter CAY59_18100 PF04264 YceI-like domain CAY59_18105 PF01292 Prokaryotic cytochrome b561 CAY59_18120 PF12792 CSS motif domain associated with EAL CAY59_18120 PF00563 EAL domain CAY59_18125 PF00270 DEAD/DEAH box helicase CAY59_18125 PF00271 Helicase conserved C-terminal domain CAY59_18130 PF04336 Acyl carrier protein phosphodiesterase CAY59_18135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_18135 PF00672 HAMP domain CAY59_18135 PF12729 Four helix bundle sensory module for signal transduction CAY59_18140 PF13419 Haloacid dehalogenase-like hydrolase CAY59_18145 PF11849 Domain of unknown function (DUF3369) CAY59_18160 PF00294 pfkB family carbohydrate kinase CAY59_18165 PF01268 Formate--tetrahydrofolate ligase CAY59_18170 PF00483 Nucleotidyl transferase CAY59_18175 PF00704 Glycosyl hydrolases family 18 CAY59_18175 PF06483 Chitinase C CAY59_18180 PF12833 Helix-turn-helix domain CAY59_18180 PF06719 AraC-type transcriptional regulator N-terminus CAY59_18185 PF00465 Iron-containing alcohol dehydrogenase CAY59_18195 PF00005 ABC transporter CAY59_18200 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_18205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_18215 PF01590 GAF domain CAY59_18215 PF00563 EAL domain CAY59_18215 PF00990 Diguanylate cyclase, GGDEF domain CAY59_18215 PF00989 PAS fold CAY59_18230 PF00356 Bacterial regulatory proteins, lacI family CAY59_18230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CAY59_18235 PF00381 PTS HPr component phosphorylation site CAY59_18235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAY59_18240 PF00294 pfkB family carbohydrate kinase CAY59_18245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAY59_18245 PF02378 Phosphotransferase system, EIIC CAY59_18255 PF00873 AcrB/AcrD/AcrF family CAY59_18260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_18265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_18275 PF08669 Glycine cleavage T-protein C-terminal barrel domain CAY59_18275 PF01571 Aminomethyltransferase folate-binding domain CAY59_18285 PF00464 Serine hydroxymethyltransferase CAY59_18290 PF01597 Glycine cleavage H-protein CAY59_18295 PF02347 Glycine cleavage system P-protein CAY59_18360 PF02311 AraC-like ligand binding domain CAY59_18360 PF12833 Helix-turn-helix domain CAY59_18370 PF01638 HxlR-like helix-turn-helix CAY59_18380 PF13186 Iron-sulfur cluster-binding domain CAY59_18380 PF04055 Radical SAM superfamily CAY59_18385 PF00884 Sulfatase CAY59_18390 PF00884 Sulfatase CAY59_18405 PF01039 Carboxyl transferase domain CAY59_18405 PF17848 Acetyl-coA carboxylase zinc finger domain CAY59_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_18410 PF03466 LysR substrate binding domain CAY59_18425 PF00089 Trypsin CAY59_18435 PF00005 ABC transporter CAY59_18435 PF00664 ABC transporter transmembrane region CAY59_18445 PF02583 Metal-sensitive transcriptional repressor CAY59_18465 PF09297 NADH pyrophosphatase zinc ribbon domain CAY59_18465 PF00293 NUDIX domain CAY59_18480 PF07690 Major Facilitator Superfamily CAY59_18560 PF00990 Diguanylate cyclase, GGDEF domain CAY59_18560 PF00072 Response regulator receiver domain CAY59_18565 PF01594 AI-2E family transporter CAY59_18605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAY59_18615 PF01979 Amidohydrolase family CAY59_18620 PF00211 Adenylate and Guanylate cyclase catalytic domain CAY59_18620 PF00072 Response regulator receiver domain CAY59_18635 PF00440 Bacterial regulatory proteins, tetR family CAY59_18635 PF08361 MAATS-type transcriptional repressor, C-terminal region CAY59_18650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CAY59_18650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_18650 PF04324 BFD-like [2Fe-2S] binding domain CAY59_18650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CAY59_18650 PF18267 Rubredoxin NAD+ reductase C-terminal domain CAY59_18650 PF13806 Rieske-like [2Fe-2S] domain CAY59_18655 PF00005 ABC transporter CAY59_18660 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_18665 PF00005 ABC transporter CAY59_18675 PF08376 Nitrate and nitrite sensing CAY59_18675 PF03861 ANTAR domain CAY59_18680 PF01738 Dienelactone hydrolase family CAY59_18685 PF00591 Glycosyl transferase family, a/b domain CAY59_18685 PF02885 Glycosyl transferase family, helical bundle domain CAY59_18690 PF10414 Sirohaem synthase dimerisation region CAY59_18690 PF14824 Sirohaem biosynthesis protein central CAY59_18690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CAY59_18695 PF01568 Molydopterin dinucleotide binding domain CAY59_18695 PF00384 Molybdopterin oxidoreductase CAY59_18695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CAY59_18700 PF00583 Acetyltransferase (GNAT) family CAY59_18705 PF00990 Diguanylate cyclase, GGDEF domain CAY59_18705 PF00563 EAL domain CAY59_18705 PF08448 PAS fold CAY59_18710 PF03222 Tryptophan/tyrosine permease family CAY59_18715 PF08448 PAS fold CAY59_18715 PF00990 Diguanylate cyclase, GGDEF domain CAY59_18725 PF00082 Subtilase family CAY59_18725 PF01483 Proprotein convertase P-domain CAY59_18735 PF00245 Alkaline phosphatase CAY59_18750 PF00072 Response regulator receiver domain CAY59_18750 PF00486 Transcriptional regulatory protein, C terminal CAY59_18790 PF00012 Hsp70 protein CAY59_18805 PF00676 Dehydrogenase E1 component CAY59_18810 PF02780 Transketolase, C-terminal domain CAY59_18810 PF02779 Transketolase, pyrimidine binding domain CAY59_18815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAY59_18815 PF02817 e3 binding domain CAY59_18815 PF00364 Biotin-requiring enzyme CAY59_18820 PF00766 Electron transfer flavoprotein FAD-binding domain CAY59_18820 PF01012 Electron transfer flavoprotein domain CAY59_18825 PF01012 Electron transfer flavoprotein domain CAY59_18835 PF12792 CSS motif domain associated with EAL CAY59_18835 PF00563 EAL domain CAY59_18845 PF13417 Glutathione S-transferase, N-terminal domain CAY59_18845 PF00043 Glutathione S-transferase, C-terminal domain CAY59_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_18850 PF03466 LysR substrate binding domain CAY59_18860 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_18865 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_18870 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_18875 PF00005 ABC transporter CAY59_18905 PF04389 Peptidase family M28 CAY59_18905 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_18910 PF07504 Fungalysin/Thermolysin Propeptide Motif CAY59_18910 PF03413 Peptidase propeptide and YPEB domain CAY59_18910 PF04151 Bacterial pre-peptidase C-terminal domain CAY59_18910 PF02868 Thermolysin metallopeptidase, alpha-helical domain CAY59_18910 PF01447 Thermolysin metallopeptidase, catalytic domain CAY59_18925 PF02028 BCCT, betaine/carnitine/choline family transporter CAY59_18935 PF00171 Aldehyde dehydrogenase family CAY59_18945 PF03466 LysR substrate binding domain CAY59_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_18950 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_18950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAY59_18960 PF01040 UbiA prenyltransferase family CAY59_18965 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CAY59_18970 PF00510 Cytochrome c oxidase subunit III CAY59_18975 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAY59_18980 PF06481 COX Aromatic Rich Motif CAY59_18980 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAY59_18995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAY59_18995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAY59_19000 PF00378 Enoyl-CoA hydratase/isomerase CAY59_19005 PF00378 Enoyl-CoA hydratase/isomerase CAY59_19015 PF00171 Aldehyde dehydrogenase family CAY59_19020 PF02803 Thiolase, C-terminal domain CAY59_19020 PF00108 Thiolase, N-terminal domain CAY59_19025 PF09278 MerR, DNA binding CAY59_19025 PF00376 MerR family regulatory protein CAY59_19030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CAY59_19030 PF02770 Acyl-CoA dehydrogenase, middle domain CAY59_19030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CAY59_19035 PF01039 Carboxyl transferase domain CAY59_19040 PF00378 Enoyl-CoA hydratase/isomerase CAY59_19045 PF00682 HMGL-like CAY59_19075 PF00034 Cytochrome c CAY59_19080 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAY59_19090 PF00034 Cytochrome c CAY59_19090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CAY59_19095 PF00871 Acetokinase family CAY59_19100 PF00563 EAL domain CAY59_19100 PF00990 Diguanylate cyclase, GGDEF domain CAY59_19100 PF03707 Bacterial signalling protein N terminal repeat CAY59_19105 PF00271 Helicase conserved C-terminal domain CAY59_19105 PF00270 DEAD/DEAH box helicase CAY59_19105 PF03880 DbpA RNA binding domain CAY59_19115 PF12833 Helix-turn-helix domain CAY59_19125 PF12849 PBP superfamily domain CAY59_19130 PF01575 MaoC like domain CAY59_19140 PF00005 ABC transporter CAY59_19145 PF12792 CSS motif domain associated with EAL CAY59_19145 PF00563 EAL domain CAY59_19165 PF00271 Helicase conserved C-terminal domain CAY59_19165 PF00270 DEAD/DEAH box helicase CAY59_19170 PF13426 PAS domain CAY59_19170 PF08447 PAS fold CAY59_19170 PF08448 PAS fold CAY59_19170 PF00563 EAL domain CAY59_19170 PF05231 MASE1 CAY59_19170 PF00990 Diguanylate cyclase, GGDEF domain CAY59_19175 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAY59_19175 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAY59_19185 PF01470 Pyroglutamyl peptidase CAY59_19205 PF12843 Putative quorum-sensing-regulated virulence factor CAY59_19230 PF01329 Pterin 4 alpha carbinolamine dehydratase CAY59_19235 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CAY59_19245 PF00501 AMP-binding enzyme CAY59_19245 PF13193 AMP-binding enzyme C-terminal domain CAY59_19255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_19255 PF03466 LysR substrate binding domain CAY59_19265 PF00892 EamA-like transporter family CAY59_19275 PF00465 Iron-containing alcohol dehydrogenase CAY59_19280 PF07995 Glucose / Sorbosone dehydrogenase CAY59_19285 PF02016 LD-carboxypeptidase N-terminal domain CAY59_19285 PF17676 LD-carboxypeptidase C-terminal domain CAY59_19295 PF00210 Ferritin-like domain CAY59_19300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_19300 PF00672 HAMP domain CAY59_19300 PF12729 Four helix bundle sensory module for signal transduction CAY59_19310 PF02687 FtsX-like permease family CAY59_19310 PF00005 ABC transporter CAY59_19310 PF12704 MacB-like periplasmic core domain CAY59_19315 PF02687 FtsX-like permease family CAY59_19315 PF12704 MacB-like periplasmic core domain CAY59_19315 PF00005 ABC transporter CAY59_19330 PF00990 Diguanylate cyclase, GGDEF domain CAY59_19340 PF03889 Alternative ribosome-rescue factor A CAY59_19345 PF00313 'Cold-shock' DNA-binding domain CAY59_19365 PF00691 OmpA family CAY59_19365 PF05736 OprF membrane domain CAY59_19375 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CAY59_19375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CAY59_19380 PF13419 Haloacid dehalogenase-like hydrolase CAY59_19385 PF00472 RF-1 domain CAY59_19395 PF00873 AcrB/AcrD/AcrF family CAY59_19400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_19410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAY59_19415 PF01546 Peptidase family M20/M25/M40 CAY59_19415 PF07687 Peptidase dimerisation domain CAY59_19430 PF00072 Response regulator receiver domain CAY59_19430 PF00196 Bacterial regulatory proteins, luxR family CAY59_19440 PF13187 4Fe-4S dicluster domain CAY59_19440 PF12838 4Fe-4S dicluster domain CAY59_19455 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CAY59_19460 PF03264 NapC/NirT cytochrome c family, N-terminal region CAY59_19470 PF00561 alpha/beta hydrolase fold CAY59_19470 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CAY59_19480 PF00108 Thiolase, N-terminal domain CAY59_19480 PF02803 Thiolase, C-terminal domain CAY59_19485 PF00106 short chain dehydrogenase CAY59_19490 PF01810 LysE type translocator CAY59_19500 PF07549 SecD/SecF GG Motif CAY59_19500 PF02355 Protein export membrane protein CAY59_19505 PF07549 SecD/SecF GG Motif CAY59_19505 PF13721 SecD export protein N-terminal TM region CAY59_19505 PF02355 Protein export membrane protein CAY59_19535 PF01037 Lrp/AsnC ligand binding domain CAY59_19550 PF00072 Response regulator receiver domain CAY59_19550 PF09308 LuxQ, periplasmic CAY59_19550 PF00512 His Kinase A (phospho-acceptor) domain CAY59_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_19560 PF13407 Periplasmic binding protein domain CAY59_19565 PF01541 GIY-YIG catalytic domain CAY59_19570 PF04337 Protein of unknown function, DUF480 CAY59_19580 PF04363 Protein of unknown function (DUF496) CAY59_19585 PF01554 MatE CAY59_19590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAY59_19595 PF00512 His Kinase A (phospho-acceptor) domain CAY59_19595 PF01627 Hpt domain CAY59_19595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAY59_19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_19595 PF00072 Response regulator receiver domain CAY59_19595 PF00672 HAMP domain CAY59_19600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_19600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CAY59_19615 PF03466 LysR substrate binding domain CAY59_19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_19625 PF01037 Lrp/AsnC ligand binding domain CAY59_19630 PF13520 Amino acid permease CAY59_19645 PF00512 His Kinase A (phospho-acceptor) domain CAY59_19645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_19645 PF00672 HAMP domain CAY59_19645 PF16527 Two-component sensor protein CpxA, periplasmic domain CAY59_19650 PF00072 Response regulator receiver domain CAY59_19650 PF00486 Transcriptional regulatory protein, C terminal CAY59_19675 PF00529 HlyD membrane-fusion protein of T1SS CAY59_19675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_19680 PF03109 ABC1 family CAY59_19685 PF03448 MgtE intracellular N domain CAY59_19685 PF00571 CBS domain CAY59_19685 PF01769 Divalent cation transporter CAY59_19690 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CAY59_19695 PF07969 Amidohydrolase family CAY59_19710 PF01966 HD domain CAY59_19725 PF07690 Major Facilitator Superfamily CAY59_19735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAY59_19740 PF00255 Glutathione peroxidase CAY59_19755 PF01323 DSBA-like thioredoxin domain CAY59_19770 PF00106 short chain dehydrogenase CAY59_19775 PF00072 Response regulator receiver domain CAY59_19775 PF00486 Transcriptional regulatory protein, C terminal CAY59_19780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_19780 PF00672 HAMP domain CAY59_19780 PF00512 His Kinase A (phospho-acceptor) domain CAY59_19790 PF01219 Prokaryotic diacylglycerol kinase CAY59_19795 PF00884 Sulfatase CAY59_19795 PF08019 Phosphoethanolamine transferase EptA/EptB CAY59_19805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAY59_19810 PF01965 DJ-1/PfpI family CAY59_19810 PF12833 Helix-turn-helix domain CAY59_19820 PF07690 Major Facilitator Superfamily CAY59_19840 PF03466 LysR substrate binding domain CAY59_19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_19845 PF02525 Flavodoxin-like fold CAY59_19850 PF00999 Sodium/hydrogen exchanger family CAY59_19850 PF02254 TrkA-N domain CAY59_19860 PF03466 LysR substrate binding domain CAY59_19860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_19890 PF03466 LysR substrate binding domain CAY59_19890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_19900 PF00128 Alpha amylase, catalytic domain CAY59_19910 PF00072 Response regulator receiver domain CAY59_19910 PF01584 CheW-like domain CAY59_19925 PF01243 Pyridoxamine 5'-phosphate oxidase CAY59_19930 PF06228 Haem utilisation ChuX/HutX CAY59_19935 PF04055 Radical SAM superfamily CAY59_19940 PF03544 Gram-negative bacterial TonB protein C-terminal CAY59_19945 PF01618 MotA/TolQ/ExbB proton channel family CAY59_19950 PF02472 Biopolymer transport protein ExbD/TolR CAY59_19960 PF01032 FecCD transport family CAY59_19965 PF00005 ABC transporter CAY59_20005 PF01467 Cytidylyltransferase-like CAY59_20015 PF00111 2Fe-2S iron-sulfur cluster binding domain CAY59_20015 PF03473 MOSC domain CAY59_20015 PF03476 MOSC N-terminal beta barrel domain CAY59_20015 PF03473 MOSC domain CAY59_20015 PF03476 MOSC N-terminal beta barrel domain CAY59_20015 PF00111 2Fe-2S iron-sulfur cluster binding domain CAY59_20020 PF01679 Proteolipid membrane potential modulator CAY59_20025 PF01979 Amidohydrolase family CAY59_20060 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_20065 PF14785 Maltose transport system permease protein MalF P2 domain CAY59_20065 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_20070 PF01547 Bacterial extracellular solute-binding protein CAY59_20080 PF00005 ABC transporter CAY59_20080 PF08402 TOBE domain CAY59_20120 PF13807 G-rich domain on putative tyrosine kinase CAY59_20120 PF13614 AAA domain CAY59_20120 PF02706 Chain length determinant protein CAY59_20130 PF00534 Glycosyl transferases group 1 CAY59_20130 PF13439 Glycosyltransferase Family 4 CAY59_20165 PF00440 Bacterial regulatory proteins, tetR family CAY59_20165 PF16925 Tetracyclin repressor-like, C-terminal domain CAY59_20170 PF16884 N-terminal domain of oxidoreductase CAY59_20170 PF00107 Zinc-binding dehydrogenase CAY59_20180 PF06628 Catalase-related immune-responsive CAY59_20180 PF00199 Catalase CAY59_20185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAY59_20185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAY59_20200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAY59_20220 PF01238 Phosphomannose isomerase type I CAY59_20230 PF00892 EamA-like transporter family CAY59_20250 PF18113 Rubredoxin binding C-terminal domain CAY59_20250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_20255 PF00301 Rubredoxin CAY59_20255 PF00753 Metallo-beta-lactamase superfamily CAY59_20255 PF00258 Flavodoxin CAY59_20260 PF01590 GAF domain CAY59_20260 PF00158 Sigma-54 interaction domain CAY59_20265 PF13419 Haloacid dehalogenase-like hydrolase CAY59_20270 PF00375 Sodium:dicarboxylate symporter family CAY59_20275 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_20285 PF00127 Copper binding proteins, plastocyanin/azurin family CAY59_20290 PF02378 Phosphotransferase system, EIIC CAY59_20295 PF00990 Diguanylate cyclase, GGDEF domain CAY59_20295 PF00563 EAL domain CAY59_20295 PF03707 Bacterial signalling protein N terminal repeat CAY59_20305 PF01389 OmpA-like transmembrane domain CAY59_20305 PF00691 OmpA family CAY59_20325 PF00691 OmpA family CAY59_20325 PF01389 OmpA-like transmembrane domain CAY59_20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_20345 PF00512 His Kinase A (phospho-acceptor) domain CAY59_20345 PF00989 PAS fold CAY59_20350 PF01966 HD domain CAY59_20350 PF00072 Response regulator receiver domain CAY59_20355 PF12464 Maltose acetyltransferase CAY59_20355 PF14602 Hexapeptide repeat of succinyl-transferase CAY59_20360 PF00529 HlyD membrane-fusion protein of T1SS CAY59_20365 PF00005 ABC transporter CAY59_20365 PF00664 ABC transporter transmembrane region CAY59_20375 PF00196 Bacterial regulatory proteins, luxR family CAY59_20380 PF00196 Bacterial regulatory proteins, luxR family CAY59_20390 PF02743 Cache domain CAY59_20390 PF00672 HAMP domain CAY59_20390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_20410 PF17863 AAA lid domain CAY59_20410 PF07726 ATPase family associated with various cellular activities (AAA) CAY59_20415 PF01882 Protein of unknown function DUF58 CAY59_20425 PF13519 von Willebrand factor type A domain CAY59_20430 PF13519 von Willebrand factor type A domain CAY59_20445 PF00005 ABC transporter CAY59_20450 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_20455 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_20460 PF12849 PBP superfamily domain CAY59_20485 PF07715 TonB-dependent Receptor Plug Domain CAY59_20485 PF00593 TonB dependent receptor CAY59_20490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAY59_20490 PF00326 Prolyl oligopeptidase family CAY59_20495 PF00270 DEAD/DEAH box helicase CAY59_20495 PF00271 Helicase conserved C-terminal domain CAY59_20505 PF01476 LysM domain CAY59_20505 PF17969 L,D-transpeptidase C-terminal domain CAY59_20505 PF03734 L,D-transpeptidase catalytic domain CAY59_20510 PF03441 FAD binding domain of DNA photolyase CAY59_20510 PF00875 DNA photolyase CAY59_20515 PF13411 MerR HTH family regulatory protein CAY59_20520 PF08349 Protein of unknown function (DUF1722) CAY59_20525 PF01048 Phosphorylase superfamily CAY59_20540 PF00990 Diguanylate cyclase, GGDEF domain CAY59_20550 PF11742 Protein of unknown function (DUF3302) CAY59_20555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_20555 PF00529 HlyD membrane-fusion protein of T1SS CAY59_20560 PF07155 ECF-type riboflavin transporter, S component CAY59_20565 PF12558 ATP-binding cassette cobalt transporter CAY59_20565 PF00005 ABC transporter CAY59_20585 PF01022 Bacterial regulatory protein, arsR family CAY59_20595 PF12837 4Fe-4S binding domain CAY59_20595 PF12801 4Fe-4S binding domain CAY59_20600 PF12800 4Fe-4S binding domain CAY59_20600 PF12838 4Fe-4S dicluster domain CAY59_20605 PF13302 Acetyltransferase (GNAT) domain CAY59_20620 PF12945 Flagellar protein YcgR CAY59_20620 PF07238 PilZ domain CAY59_20625 PF13609 Gram-negative porin CAY59_20630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_20630 PF12729 Four helix bundle sensory module for signal transduction CAY59_20630 PF00672 HAMP domain CAY59_20635 PF13654 AAA domain CAY59_20635 PF05362 Lon protease (S16) C-terminal proteolytic domain CAY59_20645 PF00005 ABC transporter CAY59_20645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_20650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAY59_20650 PF00326 Prolyl oligopeptidase family CAY59_20655 PF03466 LysR substrate binding domain CAY59_20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_20665 PF01070 FMN-dependent dehydrogenase CAY59_20675 PF00924 Mechanosensitive ion channel CAY59_20680 PF00194 Eukaryotic-type carbonic anhydrase CAY59_20685 PF08240 Alcohol dehydrogenase GroES-like domain CAY59_20685 PF00107 Zinc-binding dehydrogenase CAY59_20690 PF07690 Major Facilitator Superfamily CAY59_20695 PF00990 Diguanylate cyclase, GGDEF domain CAY59_20710 PF14031 Putative serine dehydratase domain CAY59_20710 PF01168 Alanine racemase, N-terminal domain CAY59_20720 PF08240 Alcohol dehydrogenase GroES-like domain CAY59_20720 PF00107 Zinc-binding dehydrogenase CAY59_20775 PF02368 Bacterial Ig-like domain (group 2) CAY59_20815 PF03864 Phage major capsid protein E CAY59_20835 PF02831 gpW CAY59_20890 PF06147 Protein of unknown function (DUF968) CAY59_20915 PF03354 Phage Terminase CAY59_20950 PF00069 Protein kinase domain CAY59_20950 PF03793 PASTA domain CAY59_20965 PF10065 Uncharacterized conserved protein (DUF2303) CAY59_20985 PF12167 Arm DNA-binding domain CAY59_20985 PF00589 Phage integrase family CAY59_21000 PF01661 Macro domain CAY59_21025 PF00107 Zinc-binding dehydrogenase CAY59_21025 PF08240 Alcohol dehydrogenase GroES-like domain CAY59_21030 PF00155 Aminotransferase class I and II CAY59_21035 PF00990 Diguanylate cyclase, GGDEF domain CAY59_21035 PF00563 EAL domain CAY59_21035 PF03707 Bacterial signalling protein N terminal repeat CAY59_21045 PF00266 Aminotransferase class-V CAY59_21050 PF13426 PAS domain CAY59_21050 PF00512 His Kinase A (phospho-acceptor) domain CAY59_21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_21050 PF08448 PAS fold CAY59_21050 PF00072 Response regulator receiver domain CAY59_21055 PF00072 Response regulator receiver domain CAY59_21055 PF00486 Transcriptional regulatory protein, C terminal CAY59_21075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21075 PF03466 LysR substrate binding domain CAY59_21080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_21100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21100 PF03466 LysR substrate binding domain CAY59_21145 PF02753 Pili assembly chaperone PapD, C-terminal domain CAY59_21145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CAY59_21155 PF13954 PapC N-terminal domain CAY59_21155 PF13953 PapC C-terminal domain CAY59_21155 PF00577 Outer membrane usher protein CAY59_21160 PF02753 Pili assembly chaperone PapD, C-terminal domain CAY59_21160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CAY59_21165 PF00419 Fimbrial protein CAY59_21175 PF03466 LysR substrate binding domain CAY59_21175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21185 PF05231 MASE1 CAY59_21185 PF00563 EAL domain CAY59_21195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_21195 PF18269 T3SS EscN ATPase C-terminal domain CAY59_21205 PF01706 FliG C-terminal domain CAY59_21205 PF14842 FliG N-terminal domain CAY59_21205 PF14841 FliG middle domain CAY59_21210 PF08345 Flagellar M-ring protein C-terminal CAY59_21210 PF01514 Secretory protein of YscJ/FliF family CAY59_21215 PF02049 Flagellar hook-basal body complex protein FliE CAY59_21220 PF00072 Response regulator receiver domain CAY59_21220 PF02954 Bacterial regulatory protein, Fis family CAY59_21220 PF00158 Sigma-54 interaction domain CAY59_21235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CAY59_21240 PF00813 FliP family CAY59_21245 PF01313 Bacterial export proteins, family 3 CAY59_21250 PF01311 Bacterial export proteins, family 1 CAY59_21255 PF01312 FlhB HrpN YscU SpaS Family CAY59_21270 PF00700 Bacterial flagellin C-terminal helical region CAY59_21270 PF00669 Bacterial flagellin N-terminal helical region CAY59_21280 PF07196 Flagellin hook IN motif CAY59_21280 PF07195 Flagellar hook-associated protein 2 C-terminus CAY59_21280 PF02465 Flagellar hook-associated protein 2 N-terminus CAY59_21285 PF02561 Flagellar protein FliS CAY59_21300 PF03748 Flagellar basal body-associated protein FliL CAY59_21305 PF04542 Sigma-70 region 2 CAY59_21305 PF04545 Sigma-70, region 4 CAY59_21310 PF01618 MotA/TolQ/ExbB proton channel family CAY59_21315 PF00691 OmpA family CAY59_21315 PF13677 Membrane MotB of proton-channel complex MotA/MotB CAY59_21340 PF02567 Phenazine biosynthesis-like protein CAY59_21345 PF08000 Bacterial PH domain CAY59_21355 PF00497 Bacterial extracellular solute-binding proteins, family 3 CAY59_21380 PF01321 Creatinase/Prolidase N-terminal domain CAY59_21380 PF00557 Metallopeptidase family M24 CAY59_21385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAY59_21395 PF03480 Bacterial extracellular solute-binding protein, family 7 CAY59_21400 PF07687 Peptidase dimerisation domain CAY59_21400 PF01546 Peptidase family M20/M25/M40 CAY59_21410 PF01037 Lrp/AsnC ligand binding domain CAY59_21415 PF00291 Pyridoxal-phosphate dependent enzyme CAY59_21430 PF01070 FMN-dependent dehydrogenase CAY59_21450 PF00700 Bacterial flagellin C-terminal helical region CAY59_21450 PF00669 Bacterial flagellin N-terminal helical region CAY59_21455 PF00460 Flagella basal body rod protein CAY59_21455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_21460 PF10135 Rod binding protein CAY59_21460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CAY59_21470 PF02107 Flagellar L-ring protein CAY59_21475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_21475 PF00460 Flagella basal body rod protein CAY59_21480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_21480 PF00460 Flagella basal body rod protein CAY59_21485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_21485 PF07559 Flagellar basal body protein FlaE CAY59_21485 PF00460 Flagella basal body rod protein CAY59_21490 PF13860 FlgD Ig-like domain CAY59_21490 PF13861 FlgD Tudor-like domain CAY59_21490 PF03963 Flagellar hook capping protein - N-terminal region CAY59_21495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CAY59_21495 PF00460 Flagella basal body rod protein CAY59_21500 PF00460 Flagella basal body rod protein CAY59_21520 PF01476 LysM domain CAY59_21520 PF01464 Transglycosylase SLT domain CAY59_21545 PF03315 Serine dehydratase beta chain CAY59_21545 PF03313 Serine dehydratase alpha chain CAY59_21550 PF00854 POT family CAY59_21555 PF01566 Natural resistance-associated macrophage protein CAY59_21565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21565 PF03466 LysR substrate binding domain CAY59_21575 PF03466 LysR substrate binding domain CAY59_21575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21580 PF01389 OmpA-like transmembrane domain CAY59_21580 PF00691 OmpA family CAY59_21585 PF00246 Zinc carboxypeptidase CAY59_21585 PF18027 Cytosolic carboxypeptidase N-terminal domain CAY59_21590 PF01266 FAD dependent oxidoreductase CAY59_21600 PF04393 Protein of unknown function (DUF535) CAY59_21615 PF00392 Bacterial regulatory proteins, gntR family CAY59_21615 PF07702 UTRA domain CAY59_21620 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_21625 PF00005 ABC transporter CAY59_21640 PF00266 Aminotransferase class-V CAY59_21650 PF13419 Haloacid dehalogenase-like hydrolase CAY59_21655 PF00356 Bacterial regulatory proteins, lacI family CAY59_21660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAY59_21670 PF03611 PTS system sugar-specific permease component CAY59_21710 PF13419 Haloacid dehalogenase-like hydrolase CAY59_21715 PF03466 LysR substrate binding domain CAY59_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21740 PF12464 Maltose acetyltransferase CAY59_21740 PF14602 Hexapeptide repeat of succinyl-transferase CAY59_21745 PF02566 OsmC-like protein CAY59_21750 PF01625 Peptide methionine sulfoxide reductase CAY59_21750 PF01641 SelR domain CAY59_21765 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CAY59_21770 PF03441 FAD binding domain of DNA photolyase CAY59_21770 PF00875 DNA photolyase CAY59_21775 PF00990 Diguanylate cyclase, GGDEF domain CAY59_21790 PF03707 Bacterial signalling protein N terminal repeat CAY59_21790 PF00563 EAL domain CAY59_21790 PF00990 Diguanylate cyclase, GGDEF domain CAY59_21810 PF00483 Nucleotidyl transferase CAY59_21815 PF07662 Na+ dependent nucleoside transporter C-terminus CAY59_21815 PF07670 Nucleoside recognition CAY59_21815 PF01773 Na+ dependent nucleoside transporter N-terminus CAY59_21835 PF01212 Beta-eliminating lyase CAY59_21840 PF03116 NQR2, RnfD, RnfE family CAY59_21855 PF01266 FAD dependent oxidoreductase CAY59_21870 PF05525 Branched-chain amino acid transport protein CAY59_21875 PF02954 Bacterial regulatory protein, Fis family CAY59_21875 PF00158 Sigma-54 interaction domain CAY59_21875 PF00072 Response regulator receiver domain CAY59_21880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_21880 PF00072 Response regulator receiver domain CAY59_21880 PF13426 PAS domain CAY59_21880 PF08448 PAS fold CAY59_21880 PF00512 His Kinase A (phospho-acceptor) domain CAY59_21890 PF00232 Glycosyl hydrolase family 1 CAY59_21915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_21915 PF03466 LysR substrate binding domain CAY59_21925 PF08443 RimK-like ATP-grasp domain CAY59_21925 PF18030 RimK PreATP-grasp domain CAY59_21930 PF08443 RimK-like ATP-grasp domain CAY59_21930 PF18030 RimK PreATP-grasp domain CAY59_21935 PF00753 Metallo-beta-lactamase superfamily CAY59_21940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CAY59_21940 PF17944 Arginine decarboxylase C-terminal helical extension CAY59_21940 PF17810 Arginine decarboxylase helical bundle domain CAY59_21945 PF00491 Arginase family CAY59_21950 PF07690 Major Facilitator Superfamily CAY59_21955 PF00326 Prolyl oligopeptidase family CAY59_21955 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAY59_21970 PF00950 ABC 3 transport family CAY59_21975 PF00005 ABC transporter CAY59_21980 PF01297 Zinc-uptake complex component A periplasmic CAY59_22025 PF02472 Biopolymer transport protein ExbD/TolR CAY59_22030 PF01618 MotA/TolQ/ExbB proton channel family CAY59_22035 PF01618 MotA/TolQ/ExbB proton channel family CAY59_22045 PF07715 TonB-dependent Receptor Plug Domain CAY59_22045 PF00593 TonB dependent receptor CAY59_22050 PF16750 Sensor domain of 2-component histidine kinase CAY59_22050 PF00512 His Kinase A (phospho-acceptor) domain CAY59_22050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_22050 PF00672 HAMP domain CAY59_22055 PF00072 Response regulator receiver domain CAY59_22055 PF00486 Transcriptional regulatory protein, C terminal CAY59_22060 PF03009 Glycerophosphoryl diester phosphodiesterase family CAY59_22070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CAY59_22070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CAY59_22075 PF10928 Protein of unknown function (DUF2810) CAY59_22125 PF04013 Putative SAM-dependent RNA methyltransferase CAY59_22130 PF01523 Putative modulator of DNA gyrase CAY59_22135 PF01523 Putative modulator of DNA gyrase CAY59_22145 PF08543 Phosphomethylpyrimidine kinase CAY59_22150 PF00005 ABC transporter CAY59_22155 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_22160 PF09084 NMT1/THI5 like CAY59_22165 PF03070 TENA/THI-4/PQQC family CAY59_22170 PF02110 Hydroxyethylthiazole kinase family CAY59_22175 PF02581 Thiamine monophosphate synthase CAY59_22180 PF01569 PAP2 superfamily CAY59_22185 PF01568 Molydopterin dinucleotide binding domain CAY59_22185 PF18364 Molybdopterin oxidoreductase N-terminal domain CAY59_22185 PF00384 Molybdopterin oxidoreductase CAY59_22190 PF03264 NapC/NirT cytochrome c family, N-terminal region CAY59_22220 PF00583 Acetyltransferase (GNAT) family CAY59_22260 PF00392 Bacterial regulatory proteins, gntR family CAY59_22260 PF00155 Aminotransferase class I and II CAY59_22265 PF02595 Glycerate kinase family CAY59_22270 PF17853 GGDEF-like domain CAY59_22270 PF13556 PucR C-terminal helix-turn-helix domain CAY59_22270 PF05651 Putative sugar diacid recognition CAY59_22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_22300 PF03466 LysR substrate binding domain CAY59_22325 PF02027 RolB/RolC glucosidase family CAY59_22325 PF01593 Flavin containing amine oxidoreductase CAY59_22340 PF03974 Ecotin CAY59_22345 PF03466 LysR substrate binding domain CAY59_22345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_22360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_22375 PF01204 Trehalase CAY59_22395 PF07690 Major Facilitator Superfamily CAY59_22400 PF13533 Biotin-lipoyl like CAY59_22405 PF03922 OmpW family CAY59_22410 PF13599 Pentapeptide repeats (9 copies) CAY59_22425 PF01554 MatE CAY59_22430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_22430 PF03466 LysR substrate binding domain CAY59_22440 PF00893 Small Multidrug Resistance protein CAY59_22450 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CAY59_22450 PF18416 N-acetylglucosamine binding protein domain 2 CAY59_22455 PF01037 Lrp/AsnC ligand binding domain CAY59_22460 PF01810 LysE type translocator CAY59_22495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_22495 PF03466 LysR substrate binding domain CAY59_22510 PF00797 N-acetyltransferase CAY59_22515 PF00107 Zinc-binding dehydrogenase CAY59_22515 PF08240 Alcohol dehydrogenase GroES-like domain CAY59_22520 PF00756 Putative esterase CAY59_22530 PF05656 Protein of unknown function (DUF805) CAY59_22540 PF00990 Diguanylate cyclase, GGDEF domain CAY59_22540 PF00563 EAL domain CAY59_22540 PF03707 Bacterial signalling protein N terminal repeat CAY59_22560 PF01809 Putative membrane protein insertion efficiency factor CAY59_22565 PF00849 RNA pseudouridylate synthase CAY59_22570 PF01554 MatE CAY59_22575 PF14310 Fibronectin type III-like domain CAY59_22575 PF01915 Glycosyl hydrolase family 3 C-terminal domain CAY59_22575 PF00933 Glycosyl hydrolase family 3 N terminal domain CAY59_22580 PF12833 Helix-turn-helix domain CAY59_22590 PF00356 Bacterial regulatory proteins, lacI family CAY59_22600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_22600 PF00005 ABC transporter CAY59_22605 PF00005 ABC transporter CAY59_22605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_22610 PF12911 N-terminal TM domain of oligopeptide transport permease C CAY59_22610 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_22615 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_22620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_22630 PF00356 Bacterial regulatory proteins, lacI family CAY59_22635 PF17912 MalK OB fold domain CAY59_22635 PF00005 ABC transporter CAY59_22640 PF00232 Glycosyl hydrolase family 1 CAY59_22645 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_22650 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_22660 PF00356 Bacterial regulatory proteins, lacI family CAY59_22670 PF00990 Diguanylate cyclase, GGDEF domain CAY59_22670 PF00563 EAL domain CAY59_22680 PF06865 Pyrimidine/purine nucleoside phosphorylase CAY59_22690 PF08329 Chitinase A, N-terminal domain CAY59_22690 PF00704 Glycosyl hydrolases family 18 CAY59_22720 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CAY59_22730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CAY59_22730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CAY59_22735 PF06029 AlkA N-terminal domain CAY59_22735 PF00730 HhH-GPD superfamily base excision DNA repair protein CAY59_22745 PF07681 DoxX CAY59_22750 PF03466 LysR substrate binding domain CAY59_22750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_22765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CAY59_22775 PF00194 Eukaryotic-type carbonic anhydrase CAY59_22785 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAY59_22790 PF12833 Helix-turn-helix domain CAY59_22795 PF14760 Rnk N-terminus CAY59_22795 PF01272 Transcription elongation factor, GreA/GreB, C-term CAY59_22800 PF01042 Endoribonuclease L-PSP CAY59_22815 PF01740 STAS domain CAY59_22815 PF00916 Sulfate permease family CAY59_22835 PF00005 ABC transporter CAY59_22840 PF12833 Helix-turn-helix domain CAY59_22850 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAY59_22895 PF02386 Cation transport protein CAY59_22900 PF12833 Helix-turn-helix domain CAY59_22920 PF03616 Sodium/glutamate symporter CAY59_22925 PF00392 Bacterial regulatory proteins, gntR family CAY59_22925 PF00155 Aminotransferase class I and II CAY59_22930 PF00005 ABC transporter CAY59_22950 PF01593 Flavin containing amine oxidoreductase CAY59_22970 PF03616 Sodium/glutamate symporter CAY59_22985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_22985 PF17200 Single Cache domain 2 CAY59_22985 PF00672 HAMP domain CAY59_22990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CAY59_23000 PF04397 LytTr DNA-binding domain CAY59_23000 PF00072 Response regulator receiver domain CAY59_23005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_23005 PF13492 GAF domain CAY59_23005 PF06580 Histidine kinase CAY59_23005 PF07694 5TMR of 5TMR-LYT CAY59_23025 PF00005 ABC transporter CAY59_23040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_23055 PF01098 Cell cycle protein CAY59_23060 PF01709 Transcriptional regulator CAY59_23070 PF00072 Response regulator receiver domain CAY59_23070 PF00512 His Kinase A (phospho-acceptor) domain CAY59_23070 PF01627 Hpt domain CAY59_23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_23070 PF00672 HAMP domain CAY59_23070 PF17149 Periplasmic sensor domain found in signal transduction proteins CAY59_23080 PF08719 Domain of unknown function (DUF1768) CAY59_23080 PF00925 GTP cyclohydrolase II CAY59_23090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_23090 PF00005 ABC transporter CAY59_23095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CAY59_23095 PF00005 ABC transporter CAY59_23120 PF18607 ParA helix turn helix domain CAY59_23120 PF13614 AAA domain CAY59_23125 PF08775 ParB family CAY59_23125 PF02195 ParB-like nuclease domain CAY59_23130 PF05127 Helicase CAY59_23130 PF13718 GNAT acetyltransferase 2 CAY59_23140 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_23145 PF03466 LysR substrate binding domain CAY59_23145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_23155 PF00267 Gram-negative porin CAY59_23160 PF00367 phosphotransferase system, EIIB CAY59_23160 PF02378 Phosphotransferase system, EIIC CAY59_23165 PF01380 SIS domain CAY59_23170 PF01418 Helix-turn-helix domain, rpiR family CAY59_23170 PF01380 SIS domain CAY59_23175 PF00246 Zinc carboxypeptidase CAY59_23180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_23185 PF03358 NADPH-dependent FMN reductase CAY59_23195 PF03412 Peptidase C39 family CAY59_23195 PF00005 ABC transporter CAY59_23195 PF00664 ABC transporter transmembrane region CAY59_23210 PF00529 HlyD membrane-fusion protein of T1SS CAY59_23215 PF00072 Response regulator receiver domain CAY59_23215 PF00158 Sigma-54 interaction domain CAY59_23215 PF02954 Bacterial regulatory protein, Fis family CAY59_23220 PF02743 Cache domain CAY59_23220 PF00512 His Kinase A (phospho-acceptor) domain CAY59_23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_23225 PF01243 Pyridoxamine 5'-phosphate oxidase CAY59_23225 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CAY59_23235 PF12833 Helix-turn-helix domain CAY59_23240 PF14850 DNA-binding domain of Proline dehydrogenase CAY59_23240 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CAY59_23240 PF00171 Aldehyde dehydrogenase family CAY59_23240 PF01619 Proline dehydrogenase CAY59_23250 PF00474 Sodium:solute symporter family CAY59_23290 PF01037 Lrp/AsnC ligand binding domain CAY59_23300 PF00664 ABC transporter transmembrane region CAY59_23300 PF00005 ABC transporter CAY59_23325 PF00933 Glycosyl hydrolase family 3 N terminal domain CAY59_23330 PF10688 Bacterial inner membrane protein CAY59_23335 PF01081 KDPG and KHG aldolase CAY59_23340 PF00294 pfkB family carbohydrate kinase CAY59_23345 PF02614 Glucuronate isomerase CAY59_23350 PF01232 Mannitol dehydrogenase Rossmann domain CAY59_23350 PF08125 Mannitol dehydrogenase C-terminal domain CAY59_23355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CAY59_23360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CAY59_23365 PF03480 Bacterial extracellular solute-binding protein, family 7 CAY59_23370 PF07729 FCD domain CAY59_23370 PF00392 Bacterial regulatory proteins, gntR family CAY59_23375 PF03786 D-mannonate dehydratase (UxuA) CAY59_23380 PF03466 LysR substrate binding domain CAY59_23380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_23395 PF00270 DEAD/DEAH box helicase CAY59_23395 PF00271 Helicase conserved C-terminal domain CAY59_23400 PF06629 MltA-interacting protein MipA CAY59_23410 PF13673 Acetyltransferase (GNAT) domain CAY59_23415 PF03473 MOSC domain CAY59_23415 PF03475 3-alpha domain CAY59_23425 PF12833 Helix-turn-helix domain CAY59_23435 PF13404 AsnC-type helix-turn-helix domain CAY59_23435 PF01037 Lrp/AsnC ligand binding domain CAY59_23440 PF01810 LysE type translocator CAY59_23445 PF06445 GyrI-like small molecule binding domain CAY59_23455 PF00672 HAMP domain CAY59_23455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_23455 PF02743 Cache domain CAY59_23480 PF01547 Bacterial extracellular solute-binding protein CAY59_23485 PF02903 Alpha amylase, N-terminal ig-like domain CAY59_23485 PF00128 Alpha amylase, catalytic domain CAY59_23485 PF16657 Maltogenic Amylase, C-terminal domain CAY59_23490 PF16657 Maltogenic Amylase, C-terminal domain CAY59_23490 PF00128 Alpha amylase, catalytic domain CAY59_23495 PF03466 LysR substrate binding domain CAY59_23495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_23500 PF08220 DeoR-like helix-turn-helix domain CAY59_23500 PF00455 DeoR C terminal sensor domain CAY59_23505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CAY59_23505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CAY59_23520 PF01261 Xylose isomerase-like TIM barrel CAY59_23525 PF02447 GntP family permease CAY59_23565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CAY59_23565 PF13192 Thioredoxin domain CAY59_23570 PF00578 AhpC/TSA family CAY59_23570 PF10417 C-terminal domain of 1-Cys peroxiredoxin CAY59_23575 PF01047 MarR family CAY59_23580 PF02566 OsmC-like protein CAY59_23625 PF00857 Isochorismatase family CAY59_23640 PF00535 Glycosyl transferase family 2 CAY59_23675 PF17200 Single Cache domain 2 CAY59_23675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_23675 PF00672 HAMP domain CAY59_23680 PF05193 Peptidase M16 inactive domain CAY59_23680 PF00675 Insulinase (Peptidase family M16) CAY59_23700 PF01380 SIS domain CAY59_23700 PF01418 Helix-turn-helix domain, rpiR family CAY59_23705 PF02378 Phosphotransferase system, EIIC CAY59_23710 PF01074 Glycosyl hydrolases family 38 N-terminal domain CAY59_23710 PF07748 Glycosyl hydrolases family 38 C-terminal domain CAY59_23710 PF09261 Alpha mannosidase middle domain CAY59_23715 PF00128 Alpha amylase, catalytic domain CAY59_23720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAY59_23720 PF02378 Phosphotransferase system, EIIC CAY59_23720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAY59_23725 PF01238 Phosphomannose isomerase type I CAY59_23745 PF00577 Outer membrane usher protein CAY59_23745 PF13954 PapC N-terminal domain CAY59_23745 PF13953 PapC C-terminal domain CAY59_23750 PF02753 Pili assembly chaperone PapD, C-terminal domain CAY59_23750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CAY59_23775 PF00392 Bacterial regulatory proteins, gntR family CAY59_23775 PF07702 UTRA domain CAY59_23780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAY59_23780 PF13378 Enolase C-terminal domain-like CAY59_23785 PF02378 Phosphotransferase system, EIIC CAY59_23785 PF00367 phosphotransferase system, EIIB CAY59_23785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAY59_23790 PF00294 pfkB family carbohydrate kinase CAY59_23795 PF01081 KDPG and KHG aldolase CAY59_23810 PF04225 Opacity-associated protein A LysM-like domain CAY59_23810 PF01551 Peptidase family M23 CAY59_23825 PF13533 Biotin-lipoyl like CAY59_23835 PF08360 QacR-like protein, C-terminal region CAY59_23835 PF00440 Bacterial regulatory proteins, tetR family CAY59_23840 PF07690 Major Facilitator Superfamily CAY59_23850 PF00356 Bacterial regulatory proteins, lacI family CAY59_23870 PF00474 Sodium:solute symporter family CAY59_23875 PF03315 Serine dehydratase beta chain CAY59_23875 PF03313 Serine dehydratase alpha chain CAY59_23895 PF17179 4Fe-4S dicluster domain CAY59_23905 PF00990 Diguanylate cyclase, GGDEF domain CAY59_23910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAY59_23910 PF00128 Alpha amylase, catalytic domain CAY59_23915 PF02264 LamB porin CAY59_23930 PF00128 Alpha amylase, catalytic domain CAY59_23930 PF02903 Alpha amylase, N-terminal ig-like domain CAY59_23930 PF16657 Maltogenic Amylase, C-terminal domain CAY59_23935 PF04231 Endonuclease I CAY59_23940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAY59_23940 PF17967 Pullulanase N2 domain CAY59_23940 PF18494 Pullulanase Ins domain CAY59_23940 PF03714 Bacterial pullanase-associated domain CAY59_23940 PF11852 Domain of unknown function (DUF3372) CAY59_23955 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CAY59_23955 PF01276 Orn/Lys/Arg decarboxylase, major domain CAY59_23955 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CAY59_23960 PF13520 Amino acid permease CAY59_23970 PF08543 Phosphomethylpyrimidine kinase CAY59_23980 PF01144 Coenzyme A transferase CAY59_23985 PF01144 Coenzyme A transferase CAY59_23990 PF02803 Thiolase, C-terminal domain CAY59_23990 PF00108 Thiolase, N-terminal domain CAY59_24010 PF00083 Sugar (and other) transporter CAY59_24015 PF01261 Xylose isomerase-like TIM barrel CAY59_24020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CAY59_24020 PF00205 Thiamine pyrophosphate enzyme, central domain CAY59_24020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CAY59_24025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAY59_24025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAY59_24030 PF00294 pfkB family carbohydrate kinase CAY59_24040 PF01116 Fructose-bisphosphate aldolase class-II CAY59_24055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CAY59_24055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CAY59_24065 PF03193 RsgA GTPase CAY59_24070 PF02378 Phosphotransferase system, EIIC CAY59_24070 PF00367 phosphotransferase system, EIIB CAY59_24070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CAY59_24080 PF02630 SCO1/SenC CAY59_24095 PF00196 Bacterial regulatory proteins, luxR family CAY59_24095 PF17874 MalT-like TPR region CAY59_24105 PF00343 Carbohydrate phosphorylase CAY59_24110 PF02446 4-alpha-glucanotransferase CAY59_24115 PF00128 Alpha amylase, catalytic domain CAY59_24115 PF02806 Alpha amylase, C-terminal all-beta domain CAY59_24115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CAY59_24120 PF00912 Transglycosylase CAY59_24125 PF00128 Alpha amylase, catalytic domain CAY59_24140 PF07670 Nucleoside recognition CAY59_24145 PF07670 Nucleoside recognition CAY59_24150 PF07687 Peptidase dimerisation domain CAY59_24150 PF01546 Peptidase family M20/M25/M40 CAY59_24155 PF06803 Protein of unknown function (DUF1232) CAY59_24160 PF00375 Sodium:dicarboxylate symporter family CAY59_24190 PF13614 AAA domain CAY59_24190 PF13807 G-rich domain on putative tyrosine kinase CAY59_24190 PF02706 Chain length determinant protein CAY59_24195 PF01451 Low molecular weight phosphotyrosine protein phosphatase CAY59_24200 PF10531 SLBB domain CAY59_24200 PF02563 Polysaccharide biosynthesis/export protein CAY59_24200 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CAY59_24210 PF00881 Nitroreductase family CAY59_24215 PF01914 MarC family integral membrane protein CAY59_24220 PF01734 Patatin-like phospholipase CAY59_24230 PF02469 Fasciclin domain CAY59_24235 PF03441 FAD binding domain of DNA photolyase CAY59_24235 PF00875 DNA photolyase CAY59_24255 PF00561 alpha/beta hydrolase fold CAY59_24260 PF00768 D-alanyl-D-alanine carboxypeptidase CAY59_24260 PF07943 Penicillin-binding protein 5, C-terminal domain CAY59_24270 PF03466 LysR substrate binding domain CAY59_24270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24275 PF09905 DNA-binding protein VF530 CAY59_24285 PF00175 Oxidoreductase NAD-binding domain CAY59_24285 PF00970 Oxidoreductase FAD-binding domain CAY59_24300 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CAY59_24305 PF01594 AI-2E family transporter CAY59_24315 PF00529 HlyD membrane-fusion protein of T1SS CAY59_24315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_24335 PF00892 EamA-like transporter family CAY59_24345 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CAY59_24350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24350 PF03466 LysR substrate binding domain CAY59_24355 PF07690 Major Facilitator Superfamily CAY59_24365 PF00583 Acetyltransferase (GNAT) family CAY59_24375 PF00072 Response regulator receiver domain CAY59_24375 PF00486 Transcriptional regulatory protein, C terminal CAY59_24380 PF00672 HAMP domain CAY59_24380 PF00512 His Kinase A (phospho-acceptor) domain CAY59_24380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_24395 PF00923 Transaldolase/Fructose-6-phosphate aldolase CAY59_24400 PF04055 Radical SAM superfamily CAY59_24415 PF01565 FAD binding domain CAY59_24415 PF08031 Berberine and berberine like CAY59_24420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_24420 PF00672 HAMP domain CAY59_24420 PF00512 His Kinase A (phospho-acceptor) domain CAY59_24420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CAY59_24420 PF01627 Hpt domain CAY59_24420 PF00072 Response regulator receiver domain CAY59_24435 PF00293 NUDIX domain CAY59_24435 PF13344 Haloacid dehalogenase-like hydrolase CAY59_24445 PF01042 Endoribonuclease L-PSP CAY59_24455 PF02322 Cytochrome bd terminal oxidase subunit II CAY59_24460 PF01654 Cytochrome bd terminal oxidase subunit I CAY59_24475 PF05114 Protein of unknown function (DUF692) CAY59_24490 PF02567 Phenazine biosynthesis-like protein CAY59_24495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_24510 PF00005 ABC transporter CAY59_24510 PF12848 ABC transporter CAY59_24515 PF09905 DNA-binding protein VF530 CAY59_24530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24530 PF03466 LysR substrate binding domain CAY59_24540 PF00581 Rhodanese-like domain CAY59_24545 PF01810 LysE type translocator CAY59_24550 PF03466 LysR substrate binding domain CAY59_24550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24575 PF00149 Calcineurin-like phosphoesterase CAY59_24575 PF02872 5'-nucleotidase, C-terminal domain CAY59_24580 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAY59_24580 PF07971 Glycosyl hydrolase family 92 CAY59_24585 PF07971 Glycosyl hydrolase family 92 CAY59_24585 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAY59_24595 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAY59_24595 PF07971 Glycosyl hydrolase family 92 CAY59_24600 PF17678 Glycosyl hydrolase family 92 N-terminal domain CAY59_24600 PF07971 Glycosyl hydrolase family 92 CAY59_24615 PF01625 Peptide methionine sulfoxide reductase CAY59_24615 PF01641 SelR domain CAY59_24620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CAY59_24625 PF08220 DeoR-like helix-turn-helix domain CAY59_24625 PF00455 DeoR C terminal sensor domain CAY59_24640 PF00199 Catalase CAY59_24640 PF06628 Catalase-related immune-responsive CAY59_24650 PF00080 Copper/zinc superoxide dismutase (SODC) CAY59_24665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CAY59_24665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CAY59_24680 PF06942 GlpM protein CAY59_24700 PF03466 LysR substrate binding domain CAY59_24700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24705 PF00582 Universal stress protein family CAY59_24710 PF01048 Phosphorylase superfamily CAY59_24725 PF00005 ABC transporter CAY59_24725 PF00571 CBS domain CAY59_24730 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_24740 PF02001 Protein of unknown function DUF134 CAY59_24760 PF14492 Elongation Factor G, domain II CAY59_24760 PF00009 Elongation factor Tu GTP binding domain CAY59_24760 PF03144 Elongation factor Tu domain 2 CAY59_24760 PF03764 Elongation factor G, domain IV CAY59_24760 PF00679 Elongation factor G C-terminus CAY59_24770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CAY59_24770 PF13378 Enolase C-terminal domain-like CAY59_24780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24780 PF03466 LysR substrate binding domain CAY59_24785 PF00376 MerR family regulatory protein CAY59_24785 PF09278 MerR, DNA binding CAY59_24810 PF13091 PLD-like domain CAY59_24815 PF13533 Biotin-lipoyl like CAY59_24820 PF00873 AcrB/AcrD/AcrF family CAY59_24835 PF00873 AcrB/AcrD/AcrF family CAY59_24845 PF00440 Bacterial regulatory proteins, tetR family CAY59_24845 PF13977 BetI-type transcriptional repressor, C-terminal CAY59_24855 PF00501 AMP-binding enzyme CAY59_24855 PF13193 AMP-binding enzyme C-terminal domain CAY59_24860 PF02028 BCCT, betaine/carnitine/choline family transporter CAY59_24865 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CAY59_24865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CAY59_24865 PF02837 Glycosyl hydrolases family 2, sugar binding domain CAY59_24865 PF00703 Glycosyl hydrolases family 2 CAY59_24870 PF00196 Bacterial regulatory proteins, luxR family CAY59_24880 PF00563 EAL domain CAY59_24880 PF03707 Bacterial signalling protein N terminal repeat CAY59_24880 PF00990 Diguanylate cyclase, GGDEF domain CAY59_24890 PF03616 Sodium/glutamate symporter CAY59_24895 PF02600 Disulfide bond formation protein DsbB CAY59_24905 PF00873 AcrB/AcrD/AcrF family CAY59_24910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_24915 PF03466 LysR substrate binding domain CAY59_24915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24925 PF03466 LysR substrate binding domain CAY59_24935 PF12833 Helix-turn-helix domain CAY59_24950 PF00579 tRNA synthetases class I (W and Y) CAY59_24955 PF00196 Bacterial regulatory proteins, luxR family CAY59_24955 PF00072 Response regulator receiver domain CAY59_24970 PF03618 Kinase/pyrophosphorylase CAY59_24975 PF17763 Glutaminase/Asparaginase C-terminal domain CAY59_24975 PF00710 Asparaginase, N-terminal CAY59_24980 PF03707 Bacterial signalling protein N terminal repeat CAY59_24980 PF00990 Diguanylate cyclase, GGDEF domain CAY59_24980 PF00563 EAL domain CAY59_24995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_24995 PF03466 LysR substrate binding domain CAY59_25005 PF04228 Putative neutral zinc metallopeptidase CAY59_25010 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CAY59_25025 PF17864 RuvB AAA lid domain CAY59_25025 PF05491 RuvB C-terminal winged helix domain CAY59_25025 PF05496 Holliday junction DNA helicase RuvB P-loop domain CAY59_25035 PF05816 Toxic anion resistance protein (TelA) CAY59_25045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CAY59_25050 PF03466 LysR substrate binding domain CAY59_25050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_25065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_25065 PF03466 LysR substrate binding domain CAY59_25075 PF00271 Helicase conserved C-terminal domain CAY59_25075 PF00270 DEAD/DEAH box helicase CAY59_25120 PF00155 Aminotransferase class I and II CAY59_25220 PF01872 RibD C-terminal domain CAY59_25225 PF00440 Bacterial regulatory proteins, tetR family CAY59_25225 PF02909 Tetracyclin repressor-like, C-terminal domain CAY59_25230 PF02798 Glutathione S-transferase, N-terminal domain CAY59_25235 PF02028 BCCT, betaine/carnitine/choline family transporter CAY59_25240 PF00768 D-alanyl-D-alanine carboxypeptidase CAY59_25240 PF07943 Penicillin-binding protein 5, C-terminal domain CAY59_25250 PF08241 Methyltransferase domain CAY59_25255 PF00462 Glutaredoxin CAY59_25255 PF08534 Redoxin CAY59_25270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_25270 PF03466 LysR substrate binding domain CAY59_25275 PF00990 Diguanylate cyclase, GGDEF domain CAY59_25275 PF00072 Response regulator receiver domain CAY59_25280 PF00962 Adenosine/AMP deaminase CAY59_25295 PF00313 'Cold-shock' DNA-binding domain CAY59_25300 PF05726 Pirin C-terminal cupin domain CAY59_25300 PF02678 Pirin CAY59_25305 PF01734 Patatin-like phospholipase CAY59_25315 PF01979 Amidohydrolase family CAY59_25320 PF00132 Bacterial transferase hexapeptide (six repeats) CAY59_25325 PF02492 CobW/HypB/UreG, nucleotide-binding domain CAY59_25325 PF07683 Cobalamin synthesis protein cobW C-terminal domain CAY59_25335 PF01047 MarR family CAY59_25350 PF17912 MalK OB fold domain CAY59_25350 PF00005 ABC transporter CAY59_25355 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_25360 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_25365 PF13416 Bacterial extracellular solute-binding protein CAY59_25375 PF00455 DeoR C terminal sensor domain CAY59_25375 PF08220 DeoR-like helix-turn-helix domain CAY59_25380 PF00582 Universal stress protein family CAY59_25390 PF12848 ABC transporter CAY59_25390 PF16326 ABC transporter C-terminal domain CAY59_25390 PF00005 ABC transporter CAY59_25395 PF00326 Prolyl oligopeptidase family CAY59_25395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CAY59_25405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAY59_25405 PF00529 HlyD membrane-fusion protein of T1SS CAY59_25410 PF00873 AcrB/AcrD/AcrF family CAY59_25415 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CAY59_25425 PF13302 Acetyltransferase (GNAT) domain CAY59_25430 PF03150 Di-haem cytochrome c peroxidase CAY59_25430 PF00034 Cytochrome c CAY59_25430 PF14376 Haem-binding domain CAY59_25445 PF00293 NUDIX domain CAY59_25490 PF00873 AcrB/AcrD/AcrF family CAY59_25515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CAY59_25515 PF00384 Molybdopterin oxidoreductase CAY59_25515 PF01568 Molydopterin dinucleotide binding domain CAY59_25515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CAY59_25515 PF12838 4Fe-4S dicluster domain CAY59_25525 PF01979 Amidohydrolase family CAY59_25540 PF00005 ABC transporter CAY59_25550 PF17200 Single Cache domain 2 CAY59_25550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_25550 PF00672 HAMP domain CAY59_25555 PF02685 Glucokinase CAY59_25555 PF01418 Helix-turn-helix domain, rpiR family CAY59_25555 PF01380 SIS domain CAY59_25565 PF07969 Amidohydrolase family CAY59_25575 PF00474 Sodium:solute symporter family CAY59_25580 PF00294 pfkB family carbohydrate kinase CAY59_25585 PF01081 KDPG and KHG aldolase CAY59_25590 PF02838 Glycosyl hydrolase family 20, domain 2 CAY59_25590 PF00728 Glycosyl hydrolase family 20, catalytic domain CAY59_25595 PF10282 Lactonase, 7-bladed beta-propeller CAY59_25600 PF01042 Endoribonuclease L-PSP CAY59_25605 PF02567 Phenazine biosynthesis-like protein CAY59_25610 PF01161 Phosphatidylethanolamine-binding protein CAY59_25625 PF01758 Sodium Bile acid symporter family CAY59_25640 PF01638 HxlR-like helix-turn-helix CAY59_25650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CAY59_25655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CAY59_25660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CAY59_25660 PF02378 Phosphotransferase system, EIIC CAY59_25665 PF00107 Zinc-binding dehydrogenase CAY59_25665 PF08240 Alcohol dehydrogenase GroES-like domain CAY59_25700 PF03222 Tryptophan/tyrosine permease family CAY59_25710 PF02743 Cache domain CAY59_25710 PF00672 HAMP domain CAY59_25710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_25735 PF08525 Opacity-associated protein A N-terminal motif CAY59_25735 PF01551 Peptidase family M23 CAY59_25735 PF01476 LysM domain CAY59_25745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_25745 PF03466 LysR substrate binding domain CAY59_25750 PF07690 Major Facilitator Superfamily CAY59_25760 PF00462 Glutaredoxin CAY59_25765 PF00892 EamA-like transporter family CAY59_25780 PF01557 Fumarylacetoacetate (FAA) hydrolase family CAY59_25800 PF01810 LysE type translocator CAY59_25810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CAY59_25810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CAY59_25810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CAY59_25810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CAY59_25815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CAY59_25815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CAY59_25820 PF00115 Cytochrome C and Quinol oxidase polypeptide I CAY59_25825 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CAY59_25830 PF00510 Cytochrome c oxidase subunit III CAY59_25850 PF02628 Cytochrome oxidase assembly protein CAY59_25855 PF01040 UbiA prenyltransferase family CAY59_25860 PF01389 OmpA-like transmembrane domain CAY59_25860 PF00691 OmpA family CAY59_25865 PF00793 DAHP synthetase I family CAY59_25870 PF07690 Major Facilitator Superfamily CAY59_25875 PF12729 Four helix bundle sensory module for signal transduction CAY59_25875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CAY59_25875 PF00672 HAMP domain CAY59_25880 PF00456 Transketolase, thiamine diphosphate binding domain CAY59_25880 PF02780 Transketolase, C-terminal domain CAY59_25880 PF02779 Transketolase, pyrimidine binding domain CAY59_25885 PF00923 Transaldolase/Fructose-6-phosphate aldolase CAY59_25900 PF08329 Chitinase A, N-terminal domain CAY59_25900 PF00704 Glycosyl hydrolases family 18 CAY59_25905 PF00990 Diguanylate cyclase, GGDEF domain CAY59_25905 PF00563 EAL domain CAY59_25905 PF03707 Bacterial signalling protein N terminal repeat CAY59_25910 PF00581 Rhodanese-like domain CAY59_25930 PF05893 Acyl-CoA reductase (LuxC) CAY59_25935 PF02273 Acyl transferase CAY59_25940 PF00296 Luciferase-like monooxygenase CAY59_25945 PF00296 Luciferase-like monooxygenase CAY59_25950 PF04443 Acyl-protein synthetase, LuxE CAY59_25955 PF00175 Oxidoreductase NAD-binding domain CAY59_25960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CAY59_25965 PF00899 ThiF family CAY59_25970 PF03453 MoeA N-terminal region (domain I and II) CAY59_25970 PF00994 Probable molybdopterin binding domain CAY59_25970 PF03454 MoeA C-terminal region (domain IV) CAY59_25975 PF01227 GTP cyclohydrolase I CAY59_25985 PF01566 Natural resistance-associated macrophage protein CAY59_25995 PF00654 Voltage gated chloride channel CAY59_26010 PF00248 Aldo/keto reductase family CAY59_26015 PF00072 Response regulator receiver domain CAY59_26025 PF03853 YjeF-related protein N-terminus CAY59_26025 PF01256 Carbohydrate kinase CAY59_26030 PF00478 IMP dehydrogenase / GMP reductase domain CAY59_26045 PF12146 Serine aminopeptidase, S33 CAY59_26055 PF03466 LysR substrate binding domain CAY59_26055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_26085 PF10609 NUBPL iron-transfer P-loop NTPase CAY59_26090 PF00437 Type II/IV secretion system protein CAY59_26125 PF13488 Glycine zipper CAY59_26125 PF00691 OmpA family CAY59_26155 PF00990 Diguanylate cyclase, GGDEF domain CAY59_26155 PF07694 5TMR of 5TMR-LYT CAY59_26160 PF13977 BetI-type transcriptional repressor, C-terminal CAY59_26160 PF00440 Bacterial regulatory proteins, tetR family CAY59_26165 PF00171 Aldehyde dehydrogenase family CAY59_26170 PF00732 GMC oxidoreductase CAY59_26170 PF05199 GMC oxidoreductase CAY59_26175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CAY59_26180 PF00528 Binding-protein-dependent transport system inner membrane component CAY59_26190 PF00881 Nitroreductase family CAY59_26195 PF16200 C-terminal region of band_7 CAY59_26195 PF01145 SPFH domain / Band 7 family CAY59_26215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_26215 PF00512 His Kinase A (phospho-acceptor) domain CAY59_26215 PF09456 RcsC Alpha-Beta-Loop (ABL) CAY59_26215 PF00072 Response regulator receiver domain CAY59_26220 PF03150 Di-haem cytochrome c peroxidase CAY59_26220 PF00034 Cytochrome c CAY59_26225 PF00512 His Kinase A (phospho-acceptor) domain CAY59_26225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_26225 PF00072 Response regulator receiver domain CAY59_26225 PF09308 LuxQ, periplasmic CAY59_26240 PF04116 Fatty acid hydroxylase superfamily CAY59_26270 PF09335 SNARE associated Golgi protein CAY59_26290 PF00293 NUDIX domain CAY59_26295 PF00293 NUDIX domain CAY59_26300 PF01177 Asp/Glu/Hydantoin racemase CAY59_26305 PF01048 Phosphorylase superfamily CAY59_26310 PF00563 EAL domain CAY59_26310 PF00990 Diguanylate cyclase, GGDEF domain CAY59_26315 PF05025 RbsD / FucU transport protein family CAY59_26320 PF00005 ABC transporter CAY59_26325 PF02653 Branched-chain amino acid transport system / permease component CAY59_26330 PF13407 Periplasmic binding protein domain CAY59_26335 PF00294 pfkB family carbohydrate kinase CAY59_26340 PF00356 Bacterial regulatory proteins, lacI family CAY59_26350 PF04973 Nicotinamide mononucleotide transporter CAY59_26355 PF01048 Phosphorylase superfamily CAY59_26370 PF01497 Periplasmic binding protein CAY59_26375 PF01032 FecCD transport family CAY59_26380 PF01032 FecCD transport family CAY59_26385 PF00005 ABC transporter CAY59_26390 PF13411 MerR HTH family regulatory protein CAY59_26415 PF12805 FUSC-like inner membrane protein yccS CAY59_26420 PF13361 UvrD-like helicase C-terminal domain CAY59_26420 PF12462 DNA helicase IV / RNA helicase N terminal CAY59_26420 PF00580 UvrD/REP helicase N-terminal domain CAY59_26425 PF02142 MGS-like domain CAY59_26430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CAY59_26435 PF00072 Response regulator receiver domain CAY59_26435 PF01627 Hpt domain CAY59_26435 PF00512 His Kinase A (phospho-acceptor) domain CAY59_26435 PF00672 HAMP domain CAY59_26435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_26455 PF00672 HAMP domain CAY59_26455 PF16750 Sensor domain of 2-component histidine kinase CAY59_26455 PF00512 His Kinase A (phospho-acceptor) domain CAY59_26455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_26460 PF00072 Response regulator receiver domain CAY59_26460 PF00486 Transcriptional regulatory protein, C terminal CAY59_26465 PF00884 Sulfatase CAY59_26470 PF00884 Sulfatase CAY59_26480 PF17863 AAA lid domain CAY59_26480 PF07726 ATPase family associated with various cellular activities (AAA) CAY59_26495 PF00092 von Willebrand factor type A domain CAY59_26515 PF00119 ATP synthase A chain CAY59_26520 PF00137 ATP synthase subunit C CAY59_26525 PF00430 ATP synthase B/B' CF(0) CAY59_26530 PF00213 ATP synthase delta (OSCP) subunit CAY59_26535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_26535 PF00306 ATP synthase alpha/beta chain, C terminal domain CAY59_26535 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAY59_26540 PF00231 ATP synthase CAY59_26545 PF02874 ATP synthase alpha/beta family, beta-barrel domain CAY59_26545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CAY59_26550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CAY59_26550 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CAY59_26555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CAY59_26555 PF01872 RibD C-terminal domain CAY59_26560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CAY59_26560 PF03466 LysR substrate binding domain CAY59_26565 PF00781 Diacylglycerol kinase catalytic domain CAY59_26570 PF04076 Bacterial OB fold (BOF) protein CAY59_26585 PF03781 Sulfatase-modifying factor enzyme 1 CAY59_26590 PF13186 Iron-sulfur cluster-binding domain CAY59_26590 PF04055 Radical SAM superfamily CAY59_26600 PF18081 Fanconi anemia-associated nuclease SAP domain CAY59_26600 PF08774 VRR-NUC domain CAY59_26615 PF01435 Peptidase family M48 CAY59_26620 PF04011 LemA family CAY59_26625 PF03606 C4-dicarboxylate anaerobic carrier CAY59_26645 PF00072 Response regulator receiver domain CAY59_26645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAY59_26650 PF00155 Aminotransferase class I and II CAY59_26655 PF01926 50S ribosome-binding GTPase CAY59_26660 PF01551 Peptidase family M23 CAY59_26660 PF01476 LysM domain CAY59_26660 PF08525 Opacity-associated protein A N-terminal motif CAY59_26775 PF00216 Bacterial DNA-binding protein CAY59_26810 PF00437 Type II/IV secretion system protein CAY59_26835 PF04170 NlpE N-terminal domain CAY59_26910 PF01131 DNA topoisomerase CAY59_26910 PF01751 Toprim domain CAY59_26945 PF01848 Hok/gef family CAY59_26980 PF00239 Resolvase, N terminal domain CAY59_26980 PF02796 Helix-turn-helix domain of resolvase CAY59_26995 PF18273 Type III R-M EcoP15I C-terminal domain CAY59_26995 PF01555 DNA methylase CAY59_27000 PF08774 VRR-NUC domain CAY59_27000 PF04851 Type III restriction enzyme, res subunit CAY59_27055 PF04245 37-kD nucleoid-associated bacterial protein CAY59_27105 PF13614 AAA domain CAY59_27105 PF00376 MerR family regulatory protein CAY59_27150 PF04002 RadC-like JAB domain CAY59_27165 PF02954 Bacterial regulatory protein, Fis family CAY59_27175 PF02954 Bacterial regulatory protein, Fis family CAY59_27195 PF04717 Type VI secretion system, phage-baseplate injector CAY59_27210 PF03781 Sulfatase-modifying factor enzyme 1 CAY59_27335 PF02796 Helix-turn-helix domain of resolvase CAY59_27335 PF00239 Resolvase, N terminal domain CAY59_27355 PF13362 Toprim domain CAY59_27355 PF18818 Metallopeptidase superfamily domain CAY59_27355 PF08401 Domain of unknown function (DUF1738) CAY59_27390 PF01131 DNA topoisomerase CAY59_27390 PF01751 Toprim domain CAY59_27450 PF01464 Transglycosylase SLT domain CAY59_27455 PF10502 Signal peptidase, peptidase S26 CAY59_27475 PF01848 Hok/gef family CAY59_27515 PF00437 Type II/IV secretion system protein CAY59_27540 PF03743 Bacterial conjugation TrbI-like protein CAY59_27550 PF03524 Conjugal transfer protein CAY59_27565 PF00437 Type II/IV secretion system protein CAY59_27575 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CAY59_27580 PF05101 Type IV secretory pathway, VirB3-like protein CAY59_27585 PF04956 TrbC/VIRB2 family CAY59_27610 PF02796 Helix-turn-helix domain of resolvase CAY59_27610 PF00239 Resolvase, N terminal domain CAY59_27615 PF01526 Tn3 transposase DDE domain CAY59_27615 PF13700 Domain of unknown function (DUF4158) CAY59_27625 PF13614 AAA domain CAY59_27655 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system CAY59_27680 PF13737 Transposase DDE domain CAY59_27720 PF02384 N-6 DNA Methylase CAY59_27720 PF07669 Eco57I restriction-modification methylase CAY59_27745 PF01848 Hok/gef family CAY59_27770 PF01389 OmpA-like transmembrane domain CAY59_27770 PF00691 OmpA family CAY59_27775 PF02368 Bacterial Ig-like domain (group 2) CAY59_27775 PF11999 Protein of unknown function (DUF3494) CAY59_27815 PF08775 ParB family CAY59_27815 PF02195 ParB-like nuclease domain CAY59_27820 PF13614 AAA domain CAY59_27845 PF00239 Resolvase, N terminal domain CAY59_27845 PF02796 Helix-turn-helix domain of resolvase CAY59_27885 PF02796 Helix-turn-helix domain of resolvase CAY59_27885 PF00239 Resolvase, N terminal domain CAY59_27925 PF01551 Peptidase family M23 CAY59_27925 PF08525 Opacity-associated protein A N-terminal motif CAY59_27925 PF01476 LysM domain CAY59_27935 PF02954 Bacterial regulatory protein, Fis family CAY59_27965 PF11999 Protein of unknown function (DUF3494) CAY59_27965 PF02368 Bacterial Ig-like domain (group 2) CAY59_27995 PF02899 Phage integrase, N-terminal SAM-like domain CAY59_27995 PF00589 Phage integrase family CAY59_28005 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CAY59_28060 PF00691 OmpA family CAY59_28110 PF00589 Phage integrase family CAY59_28110 PF02899 Phage integrase, N-terminal SAM-like domain CAY59_28125 PF02384 N-6 DNA Methylase CAY59_28125 PF12161 HsdM N-terminal domain CAY59_28130 PF01420 Type I restriction modification DNA specificity domain CAY59_28140 PF11867 Domain of unknown function (DUF3387) CAY59_28140 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CAY59_28140 PF18766 SWI2/SNF2 ATPase CAY59_28160 PF02796 Helix-turn-helix domain of resolvase CAY59_28160 PF00239 Resolvase, N terminal domain CAY59_28230 PF04956 TrbC/VIRB2 family CAY59_28240 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CAY59_28255 PF04335 VirB8 protein CAY59_28260 PF03524 Conjugal transfer protein CAY59_28270 PF03743 Bacterial conjugation TrbI-like protein CAY59_28290 PF01389 OmpA-like transmembrane domain CAY59_28290 PF00691 OmpA family CAY59_28295 PF02534 Type IV secretory system Conjugative DNA transfer CAY59_28310 PF01751 Toprim domain CAY59_28310 PF01131 DNA topoisomerase CAY59_28320 PF01464 Transglycosylase SLT domain CAY59_28345 PF18818 Metallopeptidase superfamily domain CAY59_28345 PF08401 Domain of unknown function (DUF1738) CAY59_28345 PF13362 Toprim domain CAY59_28360 PF03432 Relaxase/Mobilisation nuclease domain CAY59_28360 PF18821 Large polyvalent protein-associated domain 7 CAY59_28375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CAY59_28385 PF00437 Type II/IV secretion system protein CAY59_28430 PF02796 Helix-turn-helix domain of resolvase CAY59_28430 PF00239 Resolvase, N terminal domain