CAY59_00070 SM00052 Putative diguanylate phosphodiesterase CAY59_00070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAY59_00070 SM00267 diguanylate cyclase CAY59_00075 SM00344 helix_turn_helix ASNC type CAY59_00140 SM00354 helix_turn _helix lactose operon repressor CAY59_00145 SM00220 Serine/Threonine protein kinases, catalytic domain CAY59_00190 SM00382 ATPases associated with a variety of cellular activities CAY59_00340 SM00829 Enoylreductase CAY59_00380 SM00448 cheY-homologous receiver domain CAY59_00380 SM00862 Transcriptional regulatory protein, C terminal CAY59_00385 SM00387 Histidine kinase-like ATPases CAY59_00425 SM00382 ATPases associated with a variety of cellular activities CAY59_00470 SM00387 Histidine kinase-like ATPases CAY59_00470 SM00433 TopoisomeraseII CAY59_00480 SM00480 DNA polymerase III beta subunit CAY59_00485 SM00382 ATPases associated with a variety of cellular activities CAY59_00485 SM00760 Bacterial dnaA protein helix-turn-helix domain CAY59_00495 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_00495 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAY59_00505 SM00382 ATPases associated with a variety of cellular activities CAY59_00520 SM01234 CAY59_00520 CAY59_00540 SM01228 CAY59_00540 CAY59_00555 SM00470 ParB-like nuclease domain CAY59_00595 SM00382 ATPases associated with a variety of cellular activities CAY59_00615 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_00630 SM00267 diguanylate cyclase CAY59_00685 SM00487 DEAD-like helicases superfamily CAY59_00730 SM00267 diguanylate cyclase CAY59_00740 SM00563 Phosphate acyltransferases CAY59_00805 SM00257 Lysin motif CAY59_00830 SM01001 AIR carboxylase CAY59_00935 SM00876 Biotin and Thiamin Synthesis associated domain CAY59_01000 SM00342 helix_turn_helix, arabinose operon control protein CAY59_01020 SM00341 Helicase and RNase D C-terminal CAY59_01020 SM00487 DEAD-like helicases superfamily CAY59_01020 SM00490 helicase superfamily c-terminal domain CAY59_01020 SM00956 CAY59_01020 CAY59_01040 SM00487 DEAD-like helicases superfamily CAY59_01040 SM00490 helicase superfamily c-terminal domain CAY59_01050 SM00357 Cold shock protein domain CAY59_01050 SM00382 ATPases associated with a variety of cellular activities CAY59_01050 SM00959 Rho termination factor, N-terminal domain CAY59_01130 SM01219 CAY59_01130 CAY59_01165 SM00052 Putative diguanylate phosphodiesterase CAY59_01165 SM00267 diguanylate cyclase CAY59_01165 SM00897 FIST N domain CAY59_01165 SM01204 CAY59_01165 CAY59_01170 SM01144 CAY59_01170 CAY59_01205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_01210 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_01280 SM00382 ATPases associated with a variety of cellular activities CAY59_01280 SM00962 SRP54-type protein, GTPase domain CAY59_01280 SM00963 SRP54-type protein, helical bundle domain CAY59_01285 SM00382 ATPases associated with a variety of cellular activities CAY59_01305 SM00450 Rhodanese Homology Domain CAY59_01330 SM00563 Phosphate acyltransferases CAY59_01390 SM00360 RNA recognition motif CAY59_01465 SM00155 Phospholipase D. Active site motifs. CAY59_01525 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CAY59_01525 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CAY59_01530 SM00649 Ribosomal protein L11/L12 CAY59_01555 SM00663 RNA polymerase I subunit A N-terminus CAY59_01585 SM00986 Uracil DNA glycosylase superfamily CAY59_01585 SM00987 UreE urease accessory protein, C-terminal domain CAY59_01605 SM00411 bacterial (prokaryotic) histone like domain CAY59_01615 SM01209 CAY59_01615 CAY59_01615 SM01210 CAY59_01615 CAY59_01620 SM00798 AICARFT/IMPCHase bienzyme CAY59_01620 SM00851 MGS-like domain CAY59_01625 SM00422 helix_turn_helix, mercury resistance CAY59_01630 SM00862 Transcriptional regulatory protein, C terminal CAY59_01690 SM00267 diguanylate cyclase CAY59_01710 SM00878 Biotin carboxylase C-terminal domain CAY59_01730 SM00479 CAY59_01730 CAY59_01745 SM00387 Histidine kinase-like ATPases CAY59_01745 SM00388 His Kinase A (phosphoacceptor) domain CAY59_01745 SM00448 cheY-homologous receiver domain CAY59_01780 SM00421 helix_turn_helix, Lux Regulon CAY59_01780 SM00448 cheY-homologous receiver domain CAY59_01815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_01815 SM00387 Histidine kinase-like ATPases CAY59_01815 SM00388 His Kinase A (phosphoacceptor) domain CAY59_01820 SM00448 cheY-homologous receiver domain CAY59_01820 SM00862 Transcriptional regulatory protein, C terminal CAY59_01845 SM00883 Chaperonin 10 Kd subunit CAY59_01870 SM00841 Elongation factor P, C-terminal CAY59_01870 SM01185 CAY59_01870 CAY59_01930 SM00971 Serine acetyltransferase, N-terminal CAY59_01945 SM00450 Rhodanese Homology Domain CAY59_01965 SM00857 Resolvase, N terminal domain CAY59_01975 SM00530 Helix-turn-helix XRE-family like proteins CAY59_01995 SM00857 Resolvase, N terminal domain CAY59_02015 SM00479 CAY59_02015 CAY59_02095 SM00257 Lysin motif CAY59_02095 SM00646 CAY59_02095 CAY59_02100 SM00853 MutL C terminal dimerisation domain CAY59_02100 SM01340 CAY59_02100 CAY59_02120 SM00244 prohibitin homologues CAY59_02125 SM00244 prohibitin homologues CAY59_02135 SM00788 Adenylosuccinate synthetase CAY59_02140 SM00671 Sel1-like repeats. CAY59_02155 SM00316 Ribosomal protein S1-like RNA-binding domain CAY59_02155 SM00357 Cold shock protein domain CAY59_02155 SM00955 CAY59_02155 CAY59_02160 SM00967 RNA 2'-O ribose methyltransferase substrate binding CAY59_02205 SM01150 CAY59_02205 CAY59_02210 SM00100 Cyclic nucleotide-monophosphate binding domain CAY59_02210 SM00419 helix_turn_helix, cAMP Regulatory protein CAY59_02235 SM00382 ATPases associated with a variety of cellular activities CAY59_02270 SM00320 WD40 repeats CAY59_02310 SM00838 Elongation factor G C-terminus CAY59_02310 SM00889 Elongation factor G, domain IV CAY59_02330 SM00919 Malic enzyme, NAD binding domain CAY59_02330 SM01274 CAY59_02330 CAY59_02370 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAY59_02415 SM00842 Cell division protein FtsA CAY59_02435 SM00965 Secretin and TonB N terminus short domain CAY59_02495 SM01005 Alanine racemase, C-terminal domain CAY59_02650 SM00421 helix_turn_helix, Lux Regulon CAY59_02660 SM00052 Putative diguanylate phosphodiesterase CAY59_02660 SM00267 diguanylate cyclase CAY59_02680 SM00965 Secretin and TonB N terminus short domain CAY59_02690 SM00028 Tetratricopeptide repeats CAY59_02695 SM00382 ATPases associated with a variety of cellular activities CAY59_02785 SM00670 Large family of predicted nucleotide-binding domains CAY59_02790 SM00487 DEAD-like helicases superfamily CAY59_02790 SM00490 helicase superfamily c-terminal domain CAY59_02820 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_02820 SM00924 MgtE intracellular N domain CAY59_02865 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_02875 SM00382 ATPases associated with a variety of cellular activities CAY59_02910 SM00563 Phosphate acyltransferases CAY59_02955 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_02995 SM00822 CAY59_02995 CAY59_03005 SM00495 Chitin-binding domain type 3 CAY59_03035 SM00354 helix_turn _helix lactose operon repressor CAY59_03040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_03120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_03120 SM01049 CAY59_03120 CAY59_03170 SM00478 endonuclease III CAY59_03170 SM00525 CAY59_03170 CAY59_03190 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_03205 SM01152 CAY59_03205 CAY59_03225 SM00382 ATPases associated with a variety of cellular activities CAY59_03235 SM00732 Likely ribonuclease with RNase H fold. CAY59_03260 SM00731 SprT homologues. CAY59_03275 SM00861 Transketolase, pyrimidine binding domain CAY59_03285 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_03415 SM00838 Elongation factor G C-terminus CAY59_03425 SM00358 Double-stranded RNA binding motif CAY59_03425 SM00535 Ribonuclease III family CAY59_03450 SM00073 Histidine Phosphotransfer domain CAY59_03450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_03450 SM00387 Histidine kinase-like ATPases CAY59_03450 SM00388 His Kinase A (phosphoacceptor) domain CAY59_03450 SM00448 cheY-homologous receiver domain CAY59_03465 SM00954 Region found in RelA / SpoT proteins CAY59_03480 SM01192 CAY59_03480 CAY59_03480 SM01193 CAY59_03480 CAY59_03520 SM00257 Lysin motif CAY59_03530 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CAY59_03530 SM00534 ATPase domain of DNA mismatch repair MUTS family CAY59_03540 SM00382 ATPases associated with a variety of cellular activities CAY59_03550 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAY59_03630 SM00829 Enoylreductase CAY59_03660 SM01091 Transporter associated domain CAY59_03670 SM00382 ATPases associated with a variety of cellular activities CAY59_03670 SM00962 SRP54-type protein, GTPase domain CAY59_03670 SM00963 SRP54-type protein, helical bundle domain CAY59_03745 SM00644 CAY59_03745 CAY59_03750 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_03750 SM00895 CAY59_03750 CAY59_03780 SM00947 Carbonic anhydrase CAY59_03790 SM00382 ATPases associated with a variety of cellular activities CAY59_03840 SM00487 DEAD-like helicases superfamily CAY59_03840 SM00490 helicase superfamily c-terminal domain CAY59_03840 SM00847 Helicase associated domain (HA2) Add an annotation CAY59_03865 SM00938 Nitrogen regulatory protein P-II CAY59_03885 SM00382 ATPases associated with a variety of cellular activities CAY59_03895 SM01068 Putative carbohydrate binding domain CAY59_03915 SM00382 ATPases associated with a variety of cellular activities CAY59_03920 SM00382 ATPases associated with a variety of cellular activities CAY59_03990 SM00363 S4 RNA-binding domain CAY59_04020 SM01103 CAY59_04020 CAY59_04030 SM00382 ATPases associated with a variety of cellular activities CAY59_04070 SM00316 Ribosomal protein S1-like RNA-binding domain CAY59_04090 SM01387 CAY59_04090 CAY59_04095 SM00316 Ribosomal protein S1-like RNA-binding domain CAY59_04095 SM00322 K homology RNA-binding domain CAY59_04100 SM00028 Tetratricopeptide repeats CAY59_04105 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_04125 SM00052 Putative diguanylate phosphodiesterase CAY59_04125 SM00091 PAS domain CAY59_04125 SM00267 diguanylate cyclase CAY59_04155 SM00267 diguanylate cyclase CAY59_04175 SM01133 CAY59_04175 CAY59_04180 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CAY59_04210 SM00382 ATPases associated with a variety of cellular activities CAY59_04215 SM00838 Elongation factor G C-terminus CAY59_04215 SM00889 Elongation factor G, domain IV CAY59_04250 SM00342 helix_turn_helix, arabinose operon control protein CAY59_04265 SM00858 CAY59_04265 CAY59_04315 SM00028 Tetratricopeptide repeats CAY59_04355 SM01038 Beta galactosidase small chain CAY59_04360 SM00354 helix_turn _helix lactose operon repressor CAY59_04390 SM00354 helix_turn _helix lactose operon repressor CAY59_04435 SM00420 helix_turn_helix, Deoxyribose operon repressor CAY59_04435 SM01134 CAY59_04435 CAY59_04550 SM00925 MltA specific insert domain CAY59_04585 SM00464 Found in ATP-dependent protease La (LON) CAY59_04640 SM00900 CAY59_04640 CAY59_04670 SM00267 diguanylate cyclase CAY59_04670 SM00448 cheY-homologous receiver domain CAY59_04680 SM00487 DEAD-like helicases superfamily CAY59_04680 SM00490 helicase superfamily c-terminal domain CAY59_04695 SM00495 Chitin-binding domain type 3 CAY59_04695 SM00636 CAY59_04695 CAY59_04790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_04835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAY59_04845 SM00935 Outer membrane protein (OmpH-like) CAY59_04875 SM00481 DNA polymerase alpha chain like domain CAY59_04885 SM00977 TilS substrate C-terminal domain CAY59_04895 SM00938 Nitrogen regulatory protein P-II CAY59_04910 SM00257 Lysin motif CAY59_04915 SM00849 Metallo-beta-lactamase superfamily CAY59_04930 SM00479 CAY59_04930 CAY59_05015 SM00028 Tetratricopeptide repeats CAY59_05040 SM01130 CAY59_05040 CAY59_05100 SM00342 helix_turn_helix, arabinose operon control protein CAY59_05160 SM00382 ATPases associated with a variety of cellular activities CAY59_05165 SM00387 Histidine kinase-like ATPases CAY59_05165 SM00388 His Kinase A (phosphoacceptor) domain CAY59_05170 SM00382 ATPases associated with a variety of cellular activities CAY59_05170 SM00448 cheY-homologous receiver domain CAY59_05260 SM00382 ATPases associated with a variety of cellular activities CAY59_05260 SM00962 SRP54-type protein, GTPase domain CAY59_05275 SM00448 cheY-homologous receiver domain CAY59_05285 SM00073 Histidine Phosphotransfer domain CAY59_05285 SM00260 Two component signalling adaptor domain CAY59_05285 SM00387 Histidine kinase-like ATPases CAY59_05285 SM01231 CAY59_05285 CAY59_05290 SM00448 cheY-homologous receiver domain CAY59_05300 SM00260 Two component signalling adaptor domain CAY59_05305 SM00260 Two component signalling adaptor domain CAY59_05315 SM00382 ATPases associated with a variety of cellular activities CAY59_05410 SM00855 Phosphoglycerate mutase family CAY59_05415 SM00463 Small MutS-related domain CAY59_05460 SM00825 Beta-ketoacyl synthase CAY59_05540 SM00382 ATPases associated with a variety of cellular activities CAY59_05550 SM00493 CAY59_05550 CAY59_05625 SM00098 Alkaline phosphatase homologues CAY59_05665 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_05685 SM00870 CAY59_05685 CAY59_05705 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAY59_05705 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAY59_05705 SM00493 CAY59_05705 CAY59_05775 SM00859 Semialdehyde dehydrogenase, NAD binding domain CAY59_05825 SM00479 CAY59_05825 CAY59_05845 SM00478 endonuclease III CAY59_05845 SM00525 CAY59_05845 CAY59_05855 SM00900 CAY59_05855 CAY59_05890 SM00862 Transcriptional regulatory protein, C terminal CAY59_05925 SM00487 DEAD-like helicases superfamily CAY59_05925 SM00490 helicase superfamily c-terminal domain CAY59_05930 SM00382 ATPases associated with a variety of cellular activities CAY59_05930 SM00448 cheY-homologous receiver domain CAY59_05945 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_05950 SM00852 Probable molybdopterin binding domain CAY59_05985 SM00382 ATPases associated with a variety of cellular activities CAY59_05990 SM00382 ATPases associated with a variety of cellular activities CAY59_06030 SM00382 ATPases associated with a variety of cellular activities CAY59_06035 SM00642 Alpha-amylase domain CAY59_06040 SM00267 diguanylate cyclase CAY59_06065 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_06100 SM00226 Low molecular weight phosphatase family CAY59_06115 SM00316 Ribosomal protein S1-like RNA-binding domain CAY59_06120 SM00363 S4 RNA-binding domain CAY59_06150 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CAY59_06155 SM00822 CAY59_06155 CAY59_06165 SM00825 Beta-ketoacyl synthase CAY59_06250 SM00862 Transcriptional regulatory protein, C terminal CAY59_06270 SM00260 Two component signalling adaptor domain CAY59_06270 SM00448 cheY-homologous receiver domain CAY59_06275 SM00481 DNA polymerase alpha chain like domain CAY59_06290 SM00822 CAY59_06290 CAY59_06320 SM00028 Tetratricopeptide repeats CAY59_06325 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CAY59_06365 SM00354 helix_turn _helix lactose operon repressor CAY59_06400 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_06400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_06485 SM00382 ATPases associated with a variety of cellular activities CAY59_06500 SM00479 CAY59_06500 CAY59_06525 SM00507 HNH nucleases CAY59_06585 SM00220 Serine/Threonine protein kinases, catalytic domain CAY59_06585 SM00364 Leucine-rich repeats, bacterial type CAY59_06585 SM00369 Leucine-rich repeats, typical (most populated) subfamily CAY59_06590 SM00387 Histidine kinase-like ATPases CAY59_06590 SM00388 His Kinase A (phosphoacceptor) domain CAY59_06595 SM00448 cheY-homologous receiver domain CAY59_06595 SM00862 Transcriptional regulatory protein, C terminal CAY59_06615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_06615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_06675 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_06680 SM00052 Putative diguanylate phosphodiesterase CAY59_06680 SM00091 PAS domain CAY59_06730 SM00387 Histidine kinase-like ATPases CAY59_06730 SM00388 His Kinase A (phosphoacceptor) domain CAY59_06730 SM00448 cheY-homologous receiver domain CAY59_06780 SM00481 DNA polymerase alpha chain like domain CAY59_06795 SM00363 S4 RNA-binding domain CAY59_06805 SM00841 Elongation factor P, C-terminal CAY59_06805 SM01185 CAY59_06805 CAY59_06815 SM00486 DNA polymerase type-B family CAY59_06820 SM00421 helix_turn_helix, Lux Regulon CAY59_06820 SM00448 cheY-homologous receiver domain CAY59_06825 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAY59_06825 SM00465 GIY-YIG type nucleases (URI domain) CAY59_06885 SM00852 Probable molybdopterin binding domain CAY59_06910 SM00434 DNA Topoisomerase IV CAY59_07000 SM00849 Metallo-beta-lactamase superfamily CAY59_07030 SM00387 Histidine kinase-like ATPases CAY59_07030 SM01049 CAY59_07030 CAY59_07035 SM00421 helix_turn_helix, Lux Regulon CAY59_07035 SM00448 cheY-homologous receiver domain CAY59_07040 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_07050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_07050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_07055 SM00479 CAY59_07055 CAY59_07060 SM00100 Cyclic nucleotide-monophosphate binding domain CAY59_07060 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_07090 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_07110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_07110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_07120 SM00421 helix_turn_helix, Lux Regulon CAY59_07130 SM00052 Putative diguanylate phosphodiesterase CAY59_07155 SM00387 Histidine kinase-like ATPases CAY59_07155 SM00388 His Kinase A (phosphoacceptor) domain CAY59_07155 SM00448 cheY-homologous receiver domain CAY59_07185 SM00091 PAS domain CAY59_07185 SM00382 ATPases associated with a variety of cellular activities CAY59_07250 SM00287 Bacterial SH3 domain homologues CAY59_07500 SM00357 Cold shock protein domain CAY59_07880 SM00028 Tetratricopeptide repeats CAY59_07915 SM00100 Cyclic nucleotide-monophosphate binding domain CAY59_07915 SM00387 Histidine kinase-like ATPases CAY59_07920 SM00448 cheY-homologous receiver domain CAY59_07925 SM00052 Putative diguanylate phosphodiesterase CAY59_07925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAY59_07925 SM00267 diguanylate cyclase CAY59_07930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_07960 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CAY59_07965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_08000 SM00382 ATPases associated with a variety of cellular activities CAY59_08005 SM00382 ATPases associated with a variety of cellular activities CAY59_08055 SM00267 diguanylate cyclase CAY59_08055 SM01079 CAY59_08055 CAY59_08060 SM00479 CAY59_08060 CAY59_08105 SM00382 ATPases associated with a variety of cellular activities CAY59_08115 SM00354 helix_turn _helix lactose operon repressor CAY59_08140 SM01217 CAY59_08140 CAY59_08145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAY59_08175 SM00382 ATPases associated with a variety of cellular activities CAY59_08175 SM00487 DEAD-like helicases superfamily CAY59_08175 SM00490 helicase superfamily c-terminal domain CAY59_08175 SM00847 Helicase associated domain (HA2) Add an annotation CAY59_08195 SM00245 tail specific protease CAY59_08200 SM00028 Tetratricopeptide repeats CAY59_08275 SM00999 Aerolysin toxin CAY59_08285 SM00999 Aerolysin toxin CAY59_08295 SM00862 Transcriptional regulatory protein, C terminal CAY59_08335 SM00100 Cyclic nucleotide-monophosphate binding domain CAY59_08335 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_08340 SM00479 CAY59_08340 CAY59_08605 SM00091 PAS domain CAY59_08605 SM00387 Histidine kinase-like ATPases CAY59_08610 SM00448 cheY-homologous receiver domain CAY59_08625 SM01350 CAY59_08625 CAY59_08655 SM00382 ATPases associated with a variety of cellular activities CAY59_08715 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_08715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_08720 SM00220 Serine/Threonine protein kinases, catalytic domain CAY59_08755 SM00382 ATPases associated with a variety of cellular activities CAY59_08755 SM01086 C-terminal, D2-small domain, of ClpB protein CAY59_08820 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_08820 SM00895 CAY59_08820 CAY59_08865 SM00020 Trypsin-like serine protease CAY59_08865 SM00495 Chitin-binding domain type 3 CAY59_08890 SM00028 Tetratricopeptide repeats CAY59_08890 SM00267 diguanylate cyclase CAY59_08925 SM00112 Cadherin repeats. CAY59_08925 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CAY59_08925 SM00327 von Willebrand factor (vWF) type A domain CAY59_08925 SM00736 Dystroglycan-type cadherin-like domains. CAY59_08940 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CAY59_08945 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CAY59_08955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_08980 SM00382 ATPases associated with a variety of cellular activities CAY59_08995 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_09045 SM00382 ATPases associated with a variety of cellular activities CAY59_09055 SM00945 ProQ/FINO family CAY59_09060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAY59_09060 SM00245 tail specific protease CAY59_09095 SM00981 CAY59_09095 CAY59_09105 SM00382 ATPases associated with a variety of cellular activities CAY59_09155 SM00387 Histidine kinase-like ATPases CAY59_09155 SM00388 His Kinase A (phosphoacceptor) domain CAY59_09155 SM00448 cheY-homologous receiver domain CAY59_09160 SM00897 FIST N domain CAY59_09160 SM01204 CAY59_09160 CAY59_09210 SM00100 Cyclic nucleotide-monophosphate binding domain CAY59_09210 SM00419 helix_turn_helix, cAMP Regulatory protein CAY59_09240 SM00382 ATPases associated with a variety of cellular activities CAY59_09290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAY59_09335 SM00382 ATPases associated with a variety of cellular activities CAY59_09350 SM00387 Histidine kinase-like ATPases CAY59_09350 SM00388 His Kinase A (phosphoacceptor) domain CAY59_09355 SM00382 ATPases associated with a variety of cellular activities CAY59_09355 SM00448 cheY-homologous receiver domain CAY59_09370 SM00382 ATPases associated with a variety of cellular activities CAY59_09380 SM00852 Probable molybdopterin binding domain CAY59_09395 SM01144 CAY59_09395 CAY59_09445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_09460 SM00267 diguanylate cyclase CAY59_09465 SM00448 cheY-homologous receiver domain CAY59_09525 SM00382 ATPases associated with a variety of cellular activities CAY59_09525 SM00448 cheY-homologous receiver domain CAY59_09585 SM01276 CAY59_09585 CAY59_09610 SM00267 diguanylate cyclase CAY59_09635 SM01266 CAY59_09635 CAY59_09645 SM01118 CAY59_09645 CAY59_09660 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_09705 SM00872 Alpha mannosidase, middle domain CAY59_09760 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CAY59_09760 SM00495 Chitin-binding domain type 3 CAY59_09775 SM00495 Chitin-binding domain type 3 CAY59_09915 SM00267 diguanylate cyclase CAY59_09935 SM00635 Bacterial Ig-like domain 2 CAY59_09950 SM00448 cheY-homologous receiver domain CAY59_09960 SM00387 Histidine kinase-like ATPases CAY59_09960 SM00388 His Kinase A (phosphoacceptor) domain CAY59_09960 SM00448 cheY-homologous receiver domain CAY59_09975 SM00862 Transcriptional regulatory protein, C terminal CAY59_10070 SM00382 ATPases associated with a variety of cellular activities CAY59_10090 SM00855 Phosphoglycerate mutase family CAY59_10110 SM00903 Flavin reductase like domain CAY59_10135 SM00479 CAY59_10135 CAY59_10175 SM00411 bacterial (prokaryotic) histone like domain CAY59_10240 SM00382 ATPases associated with a variety of cellular activities CAY59_10245 SM00382 ATPases associated with a variety of cellular activities CAY59_10255 SM00873 B3/4 domain CAY59_10255 SM00874 tRNA synthetase B5 domain CAY59_10255 SM00896 Ferredoxin-fold anticodon binding domain CAY59_10290 SM00530 Helix-turn-helix XRE-family like proteins CAY59_10345 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CAY59_10355 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_10355 SM00866 CAY59_10355 CAY59_10440 SM00671 Sel1-like repeats. CAY59_10480 SM00487 DEAD-like helicases superfamily CAY59_10480 SM00490 helicase superfamily c-terminal domain CAY59_10480 SM00847 Helicase associated domain (HA2) Add an annotation CAY59_10485 SM00919 Malic enzyme, NAD binding domain CAY59_10485 SM01274 CAY59_10485 CAY59_10500 SM00267 diguanylate cyclase CAY59_10535 SM00382 ATPases associated with a variety of cellular activities CAY59_10540 SM00382 ATPases associated with a variety of cellular activities CAY59_10560 SM00052 Putative diguanylate phosphodiesterase CAY59_10565 SM00530 Helix-turn-helix XRE-family like proteins CAY59_10570 SM00530 Helix-turn-helix XRE-family like proteins CAY59_10575 SM00530 Helix-turn-helix XRE-family like proteins CAY59_10595 SM00267 diguanylate cyclase CAY59_10620 SM00387 Histidine kinase-like ATPases CAY59_10625 SM00448 cheY-homologous receiver domain CAY59_10710 SM00382 ATPases associated with a variety of cellular activities CAY59_10740 SM00363 S4 RNA-binding domain CAY59_10745 SM00487 DEAD-like helicases superfamily CAY59_10745 SM00490 helicase superfamily c-terminal domain CAY59_10750 SM00267 diguanylate cyclase CAY59_10760 SM00448 cheY-homologous receiver domain CAY59_10760 SM00862 Transcriptional regulatory protein, C terminal CAY59_10765 SM00387 Histidine kinase-like ATPases CAY59_10830 SM00421 helix_turn_helix, Lux Regulon CAY59_10830 SM00448 cheY-homologous receiver domain CAY59_10835 SM00387 Histidine kinase-like ATPases CAY59_10835 SM00388 His Kinase A (phosphoacceptor) domain CAY59_10840 SM00450 Rhodanese Homology Domain CAY59_10870 SM00382 ATPases associated with a variety of cellular activities CAY59_10880 SM00342 helix_turn_helix, arabinose operon control protein CAY59_10890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAY59_10890 SM00382 ATPases associated with a variety of cellular activities CAY59_10915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_10915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_10925 SM00155 Phospholipase D. Active site motifs. CAY59_10990 SM00382 ATPases associated with a variety of cellular activities CAY59_11010 SM00382 ATPases associated with a variety of cellular activities CAY59_11015 SM00382 ATPases associated with a variety of cellular activities CAY59_11025 SM01131 CAY59_11025 CAY59_11095 SM00840 CAY59_11095 CAY59_11110 SM00052 Putative diguanylate phosphodiesterase CAY59_11160 SM00382 ATPases associated with a variety of cellular activities CAY59_11170 SM00528 Domain in histone-like proteins of HNS family CAY59_11260 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_11260 SM00876 Biotin and Thiamin Synthesis associated domain CAY59_11290 SM00382 ATPases associated with a variety of cellular activities CAY59_11305 SM00344 helix_turn_helix ASNC type CAY59_11310 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CAY59_11310 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CAY59_11365 SM00466 SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. CAY59_11365 SM00507 HNH nucleases CAY59_11390 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_11415 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_11415 SM00895 CAY59_11415 CAY59_11420 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_11435 SM00862 Transcriptional regulatory protein, C terminal CAY59_11445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_11445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_11465 SM00382 ATPases associated with a variety of cellular activities CAY59_11470 SM00382 ATPases associated with a variety of cellular activities CAY59_11590 SM00382 ATPases associated with a variety of cellular activities CAY59_11720 SM00342 helix_turn_helix, arabinose operon control protein CAY59_11765 SM00387 Histidine kinase-like ATPases CAY59_11765 SM00388 His Kinase A (phosphoacceptor) domain CAY59_11765 SM00448 cheY-homologous receiver domain CAY59_11800 SM00028 Tetratricopeptide repeats CAY59_11860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_11920 SM00342 helix_turn_helix, arabinose operon control protein CAY59_11950 SM00448 cheY-homologous receiver domain CAY59_11950 SM00862 Transcriptional regulatory protein, C terminal CAY59_11960 SM00354 helix_turn _helix lactose operon repressor CAY59_11995 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAY59_11995 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAY59_11995 SM00493 CAY59_11995 CAY59_12025 SM00316 Ribosomal protein S1-like RNA-binding domain CAY59_12030 SM00382 ATPases associated with a variety of cellular activities CAY59_12030 SM01086 C-terminal, D2-small domain, of ClpB protein CAY59_12040 SM00357 Cold shock protein domain CAY59_12100 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_12100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAY59_12105 SM00382 ATPases associated with a variety of cellular activities CAY59_12145 SM00763 PrkA AAA domain CAY59_12175 SM00382 ATPases associated with a variety of cellular activities CAY59_12180 SM00849 Metallo-beta-lactamase superfamily CAY59_12195 SM00382 ATPases associated with a variety of cellular activities CAY59_12210 SM00487 DEAD-like helicases superfamily CAY59_12210 SM00490 helicase superfamily c-terminal domain CAY59_12210 SM00982 CAY59_12210 CAY59_12210 SM01058 CarD-like/TRCF domain CAY59_12260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_12260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_12285 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_12310 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_12310 SM00267 diguanylate cyclase CAY59_12335 SM00344 helix_turn_helix ASNC type CAY59_12400 SM00978 CAY59_12400 CAY59_12410 SM00563 Phosphate acyltransferases CAY59_12450 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CAY59_12480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_12485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_12490 SM01144 CAY59_12490 CAY59_12500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAY59_12510 SM00411 bacterial (prokaryotic) histone like domain CAY59_12515 SM00382 ATPases associated with a variety of cellular activities CAY59_12515 SM00464 Found in ATP-dependent protease La (LON) CAY59_12520 SM00382 ATPases associated with a variety of cellular activities CAY59_12520 SM00994 ClpX C4-type zinc finger CAY59_12520 SM01086 C-terminal, D2-small domain, of ClpB protein CAY59_12535 SM00387 Histidine kinase-like ATPases CAY59_12535 SM00388 His Kinase A (phosphoacceptor) domain CAY59_12540 SM00382 ATPases associated with a variety of cellular activities CAY59_12540 SM00448 cheY-homologous receiver domain CAY59_12590 SM00487 DEAD-like helicases superfamily CAY59_12590 SM00490 helicase superfamily c-terminal domain CAY59_12595 SM01091 Transporter associated domain CAY59_12615 SM00823 Phosphopantetheine attachment site CAY59_12710 SM00474 3'-5' exonuclease CAY59_12740 SM00487 DEAD-like helicases superfamily CAY59_12740 SM00491 CAY59_12740 CAY59_12755 SM00020 Trypsin-like serine protease CAY59_12770 SM00836 DALR anticodon binding domain CAY59_12770 SM01016 Arginyl tRNA synthetase N terminal dom CAY59_12795 SM00899 CAY59_12795 CAY59_12800 SM00342 helix_turn_helix, arabinose operon control protein CAY59_12810 SM00382 ATPases associated with a variety of cellular activities CAY59_12820 SM00881 CoA binding domain CAY59_12835 SM00861 Transketolase, pyrimidine binding domain CAY59_12945 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CAY59_12965 SM00387 Histidine kinase-like ATPases CAY59_12970 SM00862 Transcriptional regulatory protein, C terminal CAY59_13000 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_13005 SM00938 Nitrogen regulatory protein P-II CAY59_13040 SM00028 Tetratricopeptide repeats CAY59_13080 SM00244 prohibitin homologues CAY59_13105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CAY59_13105 SM00292 breast cancer carboxy-terminal domain CAY59_13105 SM00532 Ligase N family CAY59_13110 SM00771 ZipA, C-terminal domain (FtsZ-binding) CAY59_13170 SM00047 Lysozyme subfamily 2 CAY59_13215 SM00138 Methyltransferase, chemotaxis proteins CAY59_13220 SM00260 Two component signalling adaptor domain CAY59_13220 SM00448 cheY-homologous receiver domain CAY59_13225 SM00858 CAY59_13225 CAY59_13310 SM01081 Putative carbohydrate binding domain CAY59_13330 SM00463 Small MutS-related domain CAY59_13335 SM00363 S4 RNA-binding domain CAY59_13390 SM01400 CAY59_13390 CAY59_13520 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_13535 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_13535 SM01091 Transporter associated domain CAY59_13590 SM00936 Penicillin-binding protein 5, C-terminal domain CAY59_13605 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_13620 SM00642 Alpha-amylase domain CAY59_13630 SM00354 helix_turn _helix lactose operon repressor CAY59_13640 SM00382 ATPases associated with a variety of cellular activities CAY59_13640 SM00930 CAY59_13640 CAY59_13680 SM00028 Tetratricopeptide repeats CAY59_13685 SM00267 diguanylate cyclase CAY59_13695 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CAY59_13695 SM00475 5'-3' exonuclease CAY59_13720 SM00981 CAY59_13720 CAY59_13745 SM00861 Transketolase, pyrimidine binding domain CAY59_13795 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CAY59_13850 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_13895 SM00271 DnaJ molecular chaperone homology domain CAY59_13985 SM00487 DEAD-like helicases superfamily CAY59_13995 SM00382 ATPases associated with a variety of cellular activities CAY59_14005 SM00857 Resolvase, N terminal domain CAY59_14070 SM00530 Helix-turn-helix XRE-family like proteins CAY59_14120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_14145 SM00495 Chitin-binding domain type 3 CAY59_14160 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_14160 SM01240 CAY59_14160 CAY59_14175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAY59_14175 SM00267 diguanylate cyclase CAY59_14185 SM00382 ATPases associated with a variety of cellular activities CAY59_14190 SM00564 beta-propeller repeat CAY59_14210 SM00530 Helix-turn-helix XRE-family like proteins CAY59_14220 SM00562 CAY59_14220 CAY59_14245 SM00271 DnaJ molecular chaperone homology domain CAY59_14290 SM01323 CAY59_14290 CAY59_14305 SM00020 Trypsin-like serine protease CAY59_14315 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_14365 SM00382 ATPases associated with a variety of cellular activities CAY59_14400 SM00448 cheY-homologous receiver domain CAY59_14400 SM00862 Transcriptional regulatory protein, C terminal CAY59_14475 SM00382 ATPases associated with a variety of cellular activities CAY59_14475 SM01086 C-terminal, D2-small domain, of ClpB protein CAY59_14485 SM00363 S4 RNA-binding domain CAY59_14495 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_14505 SM00830 Chorismate mutase type II CAY59_14525 SM00382 ATPases associated with a variety of cellular activities CAY59_14540 SM00830 Chorismate mutase type II CAY59_14585 SM00448 cheY-homologous receiver domain CAY59_14585 SM00850 LytTr DNA-binding domain CAY59_14610 SM00904 Riboflavin kinase CAY59_14625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_14670 SM00927 DNA mismatch repair enzyme MutH CAY59_14690 SM00382 ATPases associated with a variety of cellular activities CAY59_14735 SM00487 DEAD-like helicases superfamily CAY59_14735 SM00490 helicase superfamily c-terminal domain CAY59_14765 SM00986 Uracil DNA glycosylase superfamily CAY59_14765 SM00987 UreE urease accessory protein, C-terminal domain CAY59_14770 SM00518 AP endonuclease family 2 CAY59_14815 SM00448 cheY-homologous receiver domain CAY59_14815 SM00862 Transcriptional regulatory protein, C terminal CAY59_14835 SM00091 PAS domain CAY59_14835 SM00267 diguanylate cyclase CAY59_14840 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_14915 SM00851 MGS-like domain CAY59_14915 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CAY59_14920 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CAY59_14950 SM00864 Tubulin/FtsZ family, GTPase domain CAY59_14950 SM00865 Tubulin/FtsZ family, C-terminal domain CAY59_14955 SM00842 Cell division protein FtsA CAY59_15040 SM00749 bacterial OsmY and nodulation domain CAY59_15090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAY59_15095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CAY59_15100 SM00434 DNA Topoisomerase IV CAY59_15105 SM00387 Histidine kinase-like ATPases CAY59_15105 SM00433 TopoisomeraseII CAY59_15145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_15155 SM00880 CAY59_15155 CAY59_15155 SM01118 CAY59_15155 CAY59_15170 SM00287 Bacterial SH3 domain homologues CAY59_15185 SM00382 ATPases associated with a variety of cellular activities CAY59_15205 SM00905 Dihydroneopterin aldolase CAY59_15210 SM01207 CAY59_15210 CAY59_15270 SM00563 Phosphate acyltransferases CAY59_15300 SM00448 cheY-homologous receiver domain CAY59_15300 SM00862 Transcriptional regulatory protein, C terminal CAY59_15320 SM00420 helix_turn_helix, Deoxyribose operon repressor CAY59_15320 SM01134 CAY59_15320 CAY59_15330 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_15330 SM00895 CAY59_15330 CAY59_15335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAY59_15335 SM00267 diguanylate cyclase CAY59_15365 SM00014 Acid phosphatase homologues CAY59_15380 SM00917 LeuA allosteric (dimerisation) domain CAY59_15385 SM01329 CAY59_15385 CAY59_15405 SM00271 DnaJ molecular chaperone homology domain CAY59_15425 SM00650 Ribosomal RNA adenine dimethylases CAY59_15505 SM00382 ATPases associated with a variety of cellular activities CAY59_15590 SM00382 ATPases associated with a variety of cellular activities CAY59_15645 SM00487 DEAD-like helicases superfamily CAY59_15645 SM00490 helicase superfamily c-terminal domain CAY59_15680 SM00662 RNA polymerases D CAY59_15685 SM00363 S4 RNA-binding domain CAY59_15685 SM01390 CAY59_15685 CAY59_15750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CAY59_15755 SM01374 CAY59_15755 CAY59_15775 SM00322 K homology RNA-binding domain CAY59_15790 SM01382 CAY59_15790 CAY59_15790 SM01383 CAY59_15790 CAY59_15810 SM01403 CAY59_15810 CAY59_15820 SM00487 DEAD-like helicases superfamily CAY59_15820 SM00490 helicase superfamily c-terminal domain CAY59_15825 SM00354 helix_turn _helix lactose operon repressor CAY59_15895 SM00984 UDP binding domain CAY59_15965 SM00984 UDP binding domain CAY59_15975 SM00849 Metallo-beta-lactamase superfamily CAY59_15975 SM01027 Beta-Casp domain CAY59_16105 SM01209 CAY59_16105 CAY59_16145 SM00672 Putative lipopolysaccharide-modifying enzyme. CAY59_16190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_16190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_16190 SM01049 CAY59_16190 CAY59_16240 SM00382 ATPases associated with a variety of cellular activities CAY59_16245 SM00382 ATPases associated with a variety of cellular activities CAY59_16295 SM00028 Tetratricopeptide repeats CAY59_16300 SM00072 Guanylate kinase homologues. CAY59_16305 SM01409 CAY59_16305 CAY59_16310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_16310 SM00954 Region found in RelA / SpoT proteins CAY59_16320 SM00487 DEAD-like helicases superfamily CAY59_16320 SM00490 helicase superfamily c-terminal domain CAY59_16335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_16335 SM00387 Histidine kinase-like ATPases CAY59_16335 SM00388 His Kinase A (phosphoacceptor) domain CAY59_16340 SM00448 cheY-homologous receiver domain CAY59_16340 SM00862 Transcriptional regulatory protein, C terminal CAY59_16355 SM00316 Ribosomal protein S1-like RNA-binding domain CAY59_16355 SM00732 Likely ribonuclease with RNase H fold. CAY59_16435 SM00382 ATPases associated with a variety of cellular activities CAY59_16450 SM00363 S4 RNA-binding domain CAY59_16505 SM01230 CAY59_16505 CAY59_16515 SM00091 PAS domain CAY59_16515 SM00387 Histidine kinase-like ATPases CAY59_16515 SM00388 His Kinase A (phosphoacceptor) domain CAY59_16520 SM00382 ATPases associated with a variety of cellular activities CAY59_16520 SM00448 cheY-homologous receiver domain CAY59_16525 SM00052 Putative diguanylate phosphodiesterase CAY59_16525 SM00267 diguanylate cyclase CAY59_16525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_16565 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CAY59_16565 SM00474 3'-5' exonuclease CAY59_16565 SM00475 5'-3' exonuclease CAY59_16565 SM00482 DNA polymerase A domain CAY59_16580 SM01004 Delta-aminolevulinic acid dehydratase CAY59_16630 SM00052 Putative diguanylate phosphodiesterase CAY59_16630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAY59_16630 SM00091 PAS domain CAY59_16630 SM00267 diguanylate cyclase CAY59_16680 SM00487 DEAD-like helicases superfamily CAY59_16745 SM00530 Helix-turn-helix XRE-family like proteins CAY59_16790 SM00382 ATPases associated with a variety of cellular activities CAY59_16795 SM00382 ATPases associated with a variety of cellular activities CAY59_16795 SM01086 C-terminal, D2-small domain, of ClpB protein CAY59_16830 SM00220 Serine/Threonine protein kinases, catalytic domain CAY59_16860 SM00344 helix_turn_helix ASNC type CAY59_16880 SM00240 Forkhead associated domain CAY59_16945 SM00267 diguanylate cyclase CAY59_16945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_16950 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_16950 SM00387 Histidine kinase-like ATPases CAY59_16950 SM00388 His Kinase A (phosphoacceptor) domain CAY59_16950 SM00448 cheY-homologous receiver domain CAY59_16955 SM00052 Putative diguanylate phosphodiesterase CAY59_16955 SM00448 cheY-homologous receiver domain CAY59_16960 SM00421 helix_turn_helix, Lux Regulon CAY59_16960 SM00448 cheY-homologous receiver domain CAY59_16965 SM00267 diguanylate cyclase CAY59_16975 SM00421 helix_turn_helix, Lux Regulon CAY59_16975 SM00448 cheY-homologous receiver domain CAY59_16990 SM00260 Two component signalling adaptor domain CAY59_16990 SM00448 cheY-homologous receiver domain CAY59_17020 SM00014 Acid phosphatase homologues CAY59_17070 SM00710 Parallel beta-helix repeats CAY59_17080 SM00849 Metallo-beta-lactamase superfamily CAY59_17090 SM00704 CDGSH-type zinc finger. Function unknown. CAY59_17100 SM00953 CAY59_17100 CAY59_17145 SM00448 cheY-homologous receiver domain CAY59_17150 SM00220 Serine/Threonine protein kinases, catalytic domain CAY59_17155 SM00240 Forkhead associated domain CAY59_17185 SM00331 Sigma factor PP2C-like phosphatases CAY59_17185 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAY59_17290 SM00495 Chitin-binding domain type 3 CAY59_17290 SM00636 CAY59_17290 CAY59_17325 SM00342 helix_turn_helix, arabinose operon control protein CAY59_17360 SM00382 ATPases associated with a variety of cellular activities CAY59_17425 SM00642 Alpha-amylase domain CAY59_17440 SM00880 CAY59_17440 CAY59_17475 SM00267 diguanylate cyclase CAY59_17545 SM00342 helix_turn_helix, arabinose operon control protein CAY59_17615 SM00387 Histidine kinase-like ATPases CAY59_17620 SM00421 helix_turn_helix, Lux Regulon CAY59_17620 SM00448 cheY-homologous receiver domain CAY59_17630 SM00342 helix_turn_helix, arabinose operon control protein CAY59_17660 SM00450 Rhodanese Homology Domain CAY59_17665 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_17700 SM00342 helix_turn_helix, arabinose operon control protein CAY59_17740 SM00382 ATPases associated with a variety of cellular activities CAY59_17750 SM00267 diguanylate cyclase CAY59_17750 SM00448 cheY-homologous receiver domain CAY59_17755 SM00267 diguanylate cyclase CAY59_17770 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CAY59_17770 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CAY59_17780 SM00387 Histidine kinase-like ATPases CAY59_17780 SM00388 His Kinase A (phosphoacceptor) domain CAY59_17785 SM00448 cheY-homologous receiver domain CAY59_17785 SM00862 Transcriptional regulatory protein, C terminal CAY59_17910 SM00881 CoA binding domain CAY59_17940 SM00796 Allophanate hydrolase subunit 1 CAY59_17945 SM00797 Allophanate hydrolase subunit 2 CAY59_17960 SM00382 ATPases associated with a variety of cellular activities CAY59_17975 SM00052 Putative diguanylate phosphodiesterase CAY59_17975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAY59_17975 SM00267 diguanylate cyclase CAY59_17985 SM00271 DnaJ molecular chaperone homology domain CAY59_18050 SM00782 PhnA Zinc-Ribbon CAY59_18095 SM00116 Domain in cystathionine beta-synthase and other proteins. CAY59_18100 SM00867 YceI-like domain CAY59_18120 SM00052 Putative diguanylate phosphodiesterase CAY59_18125 SM00487 DEAD-like helicases superfamily CAY59_18125 SM00490 helicase superfamily c-terminal domain CAY59_18135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_18145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_18175 SM00495 Chitin-binding domain type 3 CAY59_18175 SM00636 CAY59_18175 CAY59_18180 SM00342 helix_turn_helix, arabinose operon control protein CAY59_18195 SM00382 ATPases associated with a variety of cellular activities CAY59_18205 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_18205 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAY59_18215 SM00052 Putative diguanylate phosphodiesterase CAY59_18230 SM00354 helix_turn _helix lactose operon repressor CAY59_18280 SM00530 Helix-turn-helix XRE-family like proteins CAY59_18360 SM00342 helix_turn_helix, arabinose operon control protein CAY59_18425 SM00020 Trypsin-like serine protease CAY59_18435 SM00382 ATPases associated with a variety of cellular activities CAY59_18520 SM00028 Tetratricopeptide repeats CAY59_18555 SM00862 Transcriptional regulatory protein, C terminal CAY59_18560 SM00267 diguanylate cyclase CAY59_18560 SM01079 CAY59_18560 CAY59_18570 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CAY59_18580 SM00867 YceI-like domain CAY59_18620 SM00331 Sigma factor PP2C-like phosphatases CAY59_18620 SM00448 cheY-homologous receiver domain CAY59_18655 SM00382 ATPases associated with a variety of cellular activities CAY59_18675 SM01012 CAY59_18675 CAY59_18695 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAY59_18705 SM00052 Putative diguanylate phosphodiesterase CAY59_18715 SM00028 Tetratricopeptide repeats CAY59_18715 SM00267 diguanylate cyclase CAY59_18735 SM00098 Alkaline phosphatase homologues CAY59_18740 SM00871 Bacterial transcription activator, effector binding domain CAY59_18745 SM00388 His Kinase A (phosphoacceptor) domain CAY59_18750 SM00448 cheY-homologous receiver domain CAY59_18750 SM00862 Transcriptional regulatory protein, C terminal CAY59_18810 SM00861 Transketolase, pyrimidine binding domain CAY59_18820 SM00893 Electron transfer flavoprotein domain CAY59_18825 SM00893 Electron transfer flavoprotein domain CAY59_18835 SM00052 Putative diguanylate phosphodiesterase CAY59_18870 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_18870 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CAY59_18875 SM00382 ATPases associated with a variety of cellular activities CAY59_18910 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CAY59_18990 SM00822 CAY59_18990 CAY59_19025 SM00422 helix_turn_helix, mercury resistance CAY59_19055 SM00862 Transcriptional regulatory protein, C terminal CAY59_19100 SM00052 Putative diguanylate phosphodiesterase CAY59_19100 SM00267 diguanylate cyclase CAY59_19105 SM00487 DEAD-like helicases superfamily CAY59_19105 SM00490 helicase superfamily c-terminal domain CAY59_19115 SM00342 helix_turn_helix, arabinose operon control protein CAY59_19140 SM00382 ATPases associated with a variety of cellular activities CAY59_19145 SM00052 Putative diguanylate phosphodiesterase CAY59_19165 SM00487 DEAD-like helicases superfamily CAY59_19165 SM00490 helicase superfamily c-terminal domain CAY59_19170 SM00267 diguanylate cyclase CAY59_19175 SM00833 Cobalamin synthesis protein cobW C-terminal domain CAY59_19300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_19300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_19310 SM00382 ATPases associated with a variety of cellular activities CAY59_19330 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_19330 SM00267 diguanylate cyclase CAY59_19345 SM00357 Cold shock protein domain CAY59_19350 SM01322 CAY59_19350 CAY59_19430 SM00421 helix_turn_helix, Lux Regulon CAY59_19430 SM00448 cheY-homologous receiver domain CAY59_19485 SM00822 CAY59_19485 CAY59_19535 SM00344 helix_turn_helix ASNC type CAY59_19550 SM00387 Histidine kinase-like ATPases CAY59_19550 SM00388 His Kinase A (phosphoacceptor) domain CAY59_19550 SM00448 cheY-homologous receiver domain CAY59_19565 SM00465 GIY-YIG type nucleases (URI domain) CAY59_19595 SM00387 Histidine kinase-like ATPases CAY59_19595 SM00388 His Kinase A (phosphoacceptor) domain CAY59_19595 SM00448 cheY-homologous receiver domain CAY59_19600 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CAY59_19625 SM00344 helix_turn_helix ASNC type CAY59_19645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_19645 SM00387 Histidine kinase-like ATPases CAY59_19645 SM00388 His Kinase A (phosphoacceptor) domain CAY59_19650 SM00448 cheY-homologous receiver domain CAY59_19650 SM00862 Transcriptional regulatory protein, C terminal CAY59_19665 SM00342 helix_turn_helix, arabinose operon control protein CAY59_19685 SM00924 MgtE intracellular N domain CAY59_19710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CAY59_19715 SM00530 Helix-turn-helix XRE-family like proteins CAY59_19725 SM00563 Phosphate acyltransferases CAY59_19765 SM01065 Starch binding domain CAY59_19775 SM00448 cheY-homologous receiver domain CAY59_19775 SM00862 Transcriptional regulatory protein, C terminal CAY59_19780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_19780 SM00387 Histidine kinase-like ATPases CAY59_19780 SM00388 His Kinase A (phosphoacceptor) domain CAY59_19810 SM00342 helix_turn_helix, arabinose operon control protein CAY59_19875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_19900 SM00642 Alpha-amylase domain CAY59_19910 SM00260 Two component signalling adaptor domain CAY59_19910 SM00448 cheY-homologous receiver domain CAY59_19935 SM00729 Elongator protein 3, MiaB family, Radical SAM CAY59_19965 SM00382 ATPases associated with a variety of cellular activities CAY59_20040 SM00342 helix_turn_helix, arabinose operon control protein CAY59_20080 SM00382 ATPases associated with a variety of cellular activities CAY59_20160 SM01022 CAY59_20160 CAY59_20170 SM00829 Enoylreductase CAY59_20180 SM01060 CAY59_20180 CAY59_20255 SM00849 Metallo-beta-lactamase superfamily CAY59_20260 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CAY59_20260 SM00382 ATPases associated with a variety of cellular activities CAY59_20280 SM00495 Chitin-binding domain type 3 CAY59_20290 SM00052 Putative diguanylate phosphodiesterase CAY59_20295 SM00052 Putative diguanylate phosphodiesterase CAY59_20345 SM00387 Histidine kinase-like ATPases CAY59_20345 SM00388 His Kinase A (phosphoacceptor) domain CAY59_20350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_20350 SM00448 cheY-homologous receiver domain CAY59_20355 SM01266 CAY59_20355 CAY59_20365 SM00382 ATPases associated with a variety of cellular activities CAY59_20375 SM00421 helix_turn_helix, Lux Regulon CAY59_20380 SM00421 helix_turn_helix, Lux Regulon CAY59_20390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_20390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_20395 SM00419 helix_turn_helix, cAMP Regulatory protein CAY59_20425 SM00327 von Willebrand factor (vWF) type A domain CAY59_20430 SM00327 von Willebrand factor (vWF) type A domain CAY59_20440 SM00267 diguanylate cyclase CAY59_20445 SM00382 ATPases associated with a variety of cellular activities CAY59_20495 SM00487 DEAD-like helicases superfamily CAY59_20495 SM00490 helicase superfamily c-terminal domain CAY59_20505 SM00257 Lysin motif CAY59_20515 SM00422 helix_turn_helix, mercury resistance CAY59_20535 SM00028 Tetratricopeptide repeats CAY59_20540 SM00267 diguanylate cyclase CAY59_20565 SM00382 ATPases associated with a variety of cellular activities CAY59_20585 SM00226 Low molecular weight phosphatase family CAY59_20585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_20610 SM00587 ZnF_C4 abd HLH domain containing kinases domain CAY59_20630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_20630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_20645 SM00382 ATPases associated with a variety of cellular activities CAY59_20680 SM01057 Eukaryotic-type carbonic anhydrase CAY59_20685 SM00829 Enoylreductase CAY59_20695 SM00267 diguanylate cyclase CAY59_20710 SM01119 CAY59_20710 CAY59_20775 SM00635 Bacterial Ig-like domain 2 CAY59_20950 SM00220 Serine/Threonine protein kinases, catalytic domain CAY59_20955 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CAY59_20995 SM00530 Helix-turn-helix XRE-family like proteins CAY59_21000 SM00506 Appr-1"-p processing enzyme CAY59_21025 SM00829 Enoylreductase CAY59_21035 SM00052 Putative diguanylate phosphodiesterase CAY59_21035 SM00267 diguanylate cyclase CAY59_21040 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_21050 SM00388 His Kinase A (phosphoacceptor) domain CAY59_21055 SM00448 cheY-homologous receiver domain CAY59_21055 SM00862 Transcriptional regulatory protein, C terminal CAY59_21095 SM00849 Metallo-beta-lactamase superfamily CAY59_21110 SM00481 DNA polymerase alpha chain like domain CAY59_21180 SM00020 Trypsin-like serine protease CAY59_21185 SM00052 Putative diguanylate phosphodiesterase CAY59_21195 SM00382 ATPases associated with a variety of cellular activities CAY59_21220 SM00382 ATPases associated with a variety of cellular activities CAY59_21335 SM00342 helix_turn_helix, arabinose operon control protein CAY59_21355 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_21410 SM00344 helix_turn_helix ASNC type CAY59_21505 SM00858 CAY59_21505 CAY59_21585 SM00631 CAY59_21585 CAY59_21615 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_21615 SM00866 CAY59_21615 CAY59_21625 SM00382 ATPases associated with a variety of cellular activities CAY59_21655 SM00354 helix_turn _helix lactose operon repressor CAY59_21740 SM01266 CAY59_21740 CAY59_21775 SM00267 diguanylate cyclase CAY59_21785 SM00530 Helix-turn-helix XRE-family like proteins CAY59_21790 SM00267 diguanylate cyclase CAY59_21790 SM01079 CAY59_21790 CAY59_21875 SM00382 ATPases associated with a variety of cellular activities CAY59_21875 SM00448 cheY-homologous receiver domain CAY59_21880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAY59_21880 SM00091 PAS domain CAY59_21880 SM00387 Histidine kinase-like ATPases CAY59_21935 SM00849 Metallo-beta-lactamase superfamily CAY59_21975 SM00382 ATPases associated with a variety of cellular activities CAY59_22050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_22050 SM00387 Histidine kinase-like ATPases CAY59_22050 SM00388 His Kinase A (phosphoacceptor) domain CAY59_22055 SM00448 cheY-homologous receiver domain CAY59_22055 SM00862 Transcriptional regulatory protein, C terminal CAY59_22150 SM00382 ATPases associated with a variety of cellular activities CAY59_22180 SM00014 Acid phosphatase homologues CAY59_22200 SM00822 CAY59_22200 CAY59_22240 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_22260 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_22315 SM00974 CAY59_22315 CAY59_22450 SM00495 Chitin-binding domain type 3 CAY59_22455 SM00344 helix_turn_helix ASNC type CAY59_22515 SM00829 Enoylreductase CAY59_22540 SM00267 diguanylate cyclase CAY59_22560 SM01234 CAY59_22560 CAY59_22575 SM01217 CAY59_22575 CAY59_22580 SM00342 helix_turn_helix, arabinose operon control protein CAY59_22590 SM00354 helix_turn _helix lactose operon repressor CAY59_22600 SM00382 ATPases associated with a variety of cellular activities CAY59_22605 SM00382 ATPases associated with a variety of cellular activities CAY59_22630 SM00354 helix_turn _helix lactose operon repressor CAY59_22635 SM00382 ATPases associated with a variety of cellular activities CAY59_22660 SM00354 helix_turn _helix lactose operon repressor CAY59_22670 SM00267 diguanylate cyclase CAY59_22690 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CAY59_22690 SM00495 Chitin-binding domain type 3 CAY59_22690 SM00636 CAY59_22690 CAY59_22735 SM00342 helix_turn_helix, arabinose operon control protein CAY59_22735 SM01009 AlkA N-terminal domain CAY59_22775 SM01057 Eukaryotic-type carbonic anhydrase CAY59_22790 SM00342 helix_turn_helix, arabinose operon control protein CAY59_22835 SM00382 ATPases associated with a variety of cellular activities CAY59_22840 SM00342 helix_turn_helix, arabinose operon control protein CAY59_22860 SM00988 UreE urease accessory protein, N-terminal domain CAY59_22885 SM00342 helix_turn_helix, arabinose operon control protein CAY59_22900 SM00342 helix_turn_helix, arabinose operon control protein CAY59_22925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_22930 SM00382 ATPases associated with a variety of cellular activities CAY59_22985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_22985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_22985 SM01049 CAY59_22985 CAY59_23000 SM00448 cheY-homologous receiver domain CAY59_23000 SM00850 LytTr DNA-binding domain CAY59_23005 SM00387 Histidine kinase-like ATPases CAY59_23025 SM00382 ATPases associated with a variety of cellular activities CAY59_23070 SM00387 Histidine kinase-like ATPases CAY59_23070 SM00388 His Kinase A (phosphoacceptor) domain CAY59_23070 SM00448 cheY-homologous receiver domain CAY59_23090 SM00382 ATPases associated with a variety of cellular activities CAY59_23095 SM00382 ATPases associated with a variety of cellular activities CAY59_23125 SM00470 ParB-like nuclease domain CAY59_23195 SM00382 ATPases associated with a variety of cellular activities CAY59_23200 SM00052 Putative diguanylate phosphodiesterase CAY59_23200 SM00267 diguanylate cyclase CAY59_23215 SM00448 cheY-homologous receiver domain CAY59_23220 SM00387 Histidine kinase-like ATPases CAY59_23220 SM00388 His Kinase A (phosphoacceptor) domain CAY59_23230 SM00421 helix_turn_helix, Lux Regulon CAY59_23235 SM00342 helix_turn_helix, arabinose operon control protein CAY59_23260 SM00360 RNA recognition motif CAY59_23290 SM00344 helix_turn_helix ASNC type CAY59_23300 SM00382 ATPases associated with a variety of cellular activities CAY59_23370 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_23370 SM00895 CAY59_23370 CAY59_23395 SM00487 DEAD-like helicases superfamily CAY59_23395 SM00490 helicase superfamily c-terminal domain CAY59_23425 SM00342 helix_turn_helix, arabinose operon control protein CAY59_23435 SM00344 helix_turn_helix ASNC type CAY59_23445 SM00342 helix_turn_helix, arabinose operon control protein CAY59_23445 SM00871 Bacterial transcription activator, effector binding domain CAY59_23450 SM00829 Enoylreductase CAY59_23455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_23485 SM00642 Alpha-amylase domain CAY59_23490 SM00642 Alpha-amylase domain CAY59_23500 SM00420 helix_turn_helix, Deoxyribose operon repressor CAY59_23500 SM01134 CAY59_23500 CAY59_23575 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_23605 SM00342 helix_turn_helix, arabinose operon control protein CAY59_23675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_23675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_23710 SM00872 Alpha mannosidase, middle domain CAY59_23715 SM00642 Alpha-amylase domain CAY59_23735 SM00530 Helix-turn-helix XRE-family like proteins CAY59_23775 SM00345 helix_turn_helix gluconate operon transcriptional repressor CAY59_23775 SM00866 CAY59_23775 CAY59_23780 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CAY59_23845 SM00857 Resolvase, N terminal domain CAY59_23850 SM00354 helix_turn _helix lactose operon repressor CAY59_23905 SM00267 diguanylate cyclase CAY59_23910 SM00642 Alpha-amylase domain CAY59_23930 SM00642 Alpha-amylase domain CAY59_23940 SM00642 Alpha-amylase domain CAY59_23945 SM00671 Sel1-like repeats. CAY59_23965 SM00966 SpoVT / AbrB like domain CAY59_23980 SM00882 Coenzyme A transferase CAY59_23985 SM00882 Coenzyme A transferase CAY59_24095 SM00421 helix_turn_helix, Lux Regulon CAY59_24115 SM00642 Alpha-amylase domain CAY59_24125 SM00642 Alpha-amylase domain CAY59_24195 SM00226 Low molecular weight phosphatase family CAY59_24230 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CAY59_24245 SM00450 Rhodanese Homology Domain CAY59_24260 SM00936 Penicillin-binding protein 5, C-terminal domain CAY59_24375 SM00448 cheY-homologous receiver domain CAY59_24375 SM00862 Transcriptional regulatory protein, C terminal CAY59_24380 SM00387 Histidine kinase-like ATPases CAY59_24380 SM00388 His Kinase A (phosphoacceptor) domain CAY59_24420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CAY59_24420 SM00091 PAS domain CAY59_24420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_24420 SM00387 Histidine kinase-like ATPases CAY59_24420 SM00388 His Kinase A (phosphoacceptor) domain CAY59_24420 SM00448 cheY-homologous receiver domain CAY59_24510 SM00382 ATPases associated with a variety of cellular activities CAY59_24540 SM00450 Rhodanese Homology Domain CAY59_24625 SM00420 helix_turn_helix, Deoxyribose operon repressor CAY59_24625 SM01134 CAY59_24625 CAY59_24640 SM01060 CAY59_24640 CAY59_24645 SM00248 ankyrin repeats CAY59_24725 SM00382 ATPases associated with a variety of cellular activities CAY59_24760 SM00838 Elongation factor G C-terminus CAY59_24760 SM00889 Elongation factor G, domain IV CAY59_24770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CAY59_24785 SM00422 helix_turn_helix, mercury resistance CAY59_24790 SM00028 Tetratricopeptide repeats CAY59_24795 SM01022 CAY59_24795 CAY59_24810 SM00155 Phospholipase D. Active site motifs. CAY59_24870 SM00421 helix_turn_helix, Lux Regulon CAY59_24875 SM00530 Helix-turn-helix XRE-family like proteins CAY59_24880 SM00267 diguanylate cyclase CAY59_24935 SM00342 helix_turn_helix, arabinose operon control protein CAY59_24945 SM00886 Stress responsive A/B Barrel Domain CAY59_24955 SM00421 helix_turn_helix, Lux Regulon CAY59_24975 SM00870 CAY59_24975 CAY59_24980 SM00052 Putative diguanylate phosphodiesterase CAY59_24990 SM00788 Adenylosuccinate synthetase CAY59_25025 SM00382 ATPases associated with a variety of cellular activities CAY59_25070 SM00849 Metallo-beta-lactamase superfamily CAY59_25075 SM00487 DEAD-like helicases superfamily CAY59_25075 SM00490 helicase superfamily c-terminal domain CAY59_25125 SM00342 helix_turn_helix, arabinose operon control protein CAY59_25125 SM00871 Bacterial transcription activator, effector binding domain CAY59_25175 SM00822 CAY59_25175 CAY59_25240 SM00936 Penicillin-binding protein 5, C-terminal domain CAY59_25275 SM00267 diguanylate cyclase CAY59_25275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_25295 SM00357 Cold shock protein domain CAY59_25335 SM00347 helix_turn_helix multiple antibiotic resistance protein CAY59_25350 SM00382 ATPases associated with a variety of cellular activities CAY59_25375 SM00420 helix_turn_helix, Deoxyribose operon repressor CAY59_25375 SM01134 CAY59_25375 CAY59_25390 SM00382 ATPases associated with a variety of cellular activities CAY59_25430 SM01235 CAY59_25430 CAY59_25450 SM00422 helix_turn_helix, mercury resistance CAY59_25515 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CAY59_25540 SM00382 ATPases associated with a variety of cellular activities CAY59_25550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_25550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_25560 SM01119 CAY59_25560 CAY59_25615 SM00342 helix_turn_helix, arabinose operon control protein CAY59_25630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CAY59_25680 SM00481 DNA polymerase alpha chain like domain CAY59_25690 SM00530 Helix-turn-helix XRE-family like proteins CAY59_25710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_25710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_25795 SM00342 helix_turn_helix, arabinose operon control protein CAY59_25875 SM00091 PAS domain CAY59_25875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CAY59_25880 SM00861 Transketolase, pyrimidine binding domain CAY59_25900 SM00636 CAY59_25900 CAY59_25905 SM00052 Putative diguanylate phosphodiesterase CAY59_25905 SM00267 diguanylate cyclase CAY59_25910 SM00450 Rhodanese Homology Domain CAY59_25970 SM00852 Probable molybdopterin binding domain CAY59_26015 SM00448 cheY-homologous receiver domain CAY59_26030 SM01240 CAY59_26030 CAY59_26090 SM00382 ATPases associated with a variety of cellular activities CAY59_26135 SM00458 Ricin-type beta-trefoil CAY59_26155 SM00267 diguanylate cyclase CAY59_26195 SM00244 prohibitin homologues CAY59_26215 SM00062 Bacterial periplasmic substrate-binding proteins CAY59_26215 SM00387 Histidine kinase-like ATPases CAY59_26215 SM00388 His Kinase A (phosphoacceptor) domain CAY59_26215 SM00448 cheY-homologous receiver domain CAY59_26225 SM00387 Histidine kinase-like ATPases CAY59_26225 SM00388 His Kinase A (phosphoacceptor) domain CAY59_26225 SM00448 cheY-homologous receiver domain CAY59_26310 SM00052 Putative diguanylate phosphodiesterase CAY59_26310 SM00267 diguanylate cyclase CAY59_26320 SM00382 ATPases associated with a variety of cellular activities CAY59_26340 SM00354 helix_turn _helix lactose operon repressor CAY59_26385 SM00382 ATPases associated with a variety of cellular activities CAY59_26390 SM00422 helix_turn_helix, mercury resistance CAY59_26425 SM00851 MGS-like domain CAY59_26435 SM00073 Histidine Phosphotransfer domain CAY59_26435 SM00387 Histidine kinase-like ATPases CAY59_26435 SM00388 His Kinase A (phosphoacceptor) domain CAY59_26435 SM00448 cheY-homologous receiver domain CAY59_26455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CAY59_26455 SM00387 Histidine kinase-like ATPases CAY59_26455 SM00388 His Kinase A (phosphoacceptor) domain CAY59_26460 SM00448 cheY-homologous receiver domain CAY59_26460 SM00862 Transcriptional regulatory protein, C terminal CAY59_26475 SM00028 Tetratricopeptide repeats CAY59_26495 SM00327 von Willebrand factor (vWF) type A domain CAY59_26545 SM00382 ATPases associated with a variety of cellular activities CAY59_26565 SM00046 Diacylglycerol kinase catalytic domain (presumed) CAY59_26595 SM00028 Tetratricopeptide repeats CAY59_26600 SM00990 CAY59_26600 CAY59_26645 SM00387 Histidine kinase-like ATPases CAY59_26645 SM00448 cheY-homologous receiver domain CAY59_26710 SM00487 DEAD-like helicases superfamily CAY59_26775 SM00411 bacterial (prokaryotic) histone like domain CAY59_26780 SM00020 Trypsin-like serine protease CAY59_26910 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAY59_26910 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAY59_26910 SM00493 CAY59_26910 CAY59_26980 SM00857 Resolvase, N terminal domain CAY59_27130 SM00487 DEAD-like helicases superfamily CAY59_27205 SM00257 Lysin motif CAY59_27335 SM00857 Resolvase, N terminal domain CAY59_27390 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAY59_27390 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAY59_27390 SM00493 CAY59_27390 CAY59_27610 SM00857 Resolvase, N terminal domain CAY59_27775 SM00635 Bacterial Ig-like domain 2 CAY59_27845 SM00857 Resolvase, N terminal domain CAY59_27885 SM00857 Resolvase, N terminal domain CAY59_27905 SM00857 Resolvase, N terminal domain CAY59_27955 SM00635 Bacterial Ig-like domain 2 CAY59_27965 SM00635 Bacterial Ig-like domain 2 CAY59_27970 SM00635 Bacterial Ig-like domain 2 CAY59_28000 SM00966 SpoVT / AbrB like domain CAY59_28140 SM00487 DEAD-like helicases superfamily CAY59_28155 SM00530 Helix-turn-helix XRE-family like proteins CAY59_28160 SM00857 Resolvase, N terminal domain CAY59_28220 SM00530 Helix-turn-helix XRE-family like proteins CAY59_28240 SM00382 ATPases associated with a variety of cellular activities CAY59_28310 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CAY59_28310 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CAY59_28310 SM00493 CAY59_28310 CAY59_28430 SM00857 Resolvase, N terminal domain