locus-tag class description VAB027_1 PF11638 DnaA N-terminal domain VAB027_1 PF08299 Bacterial dnaA protein helix-turn-helix VAB027_1 PF00308 Bacterial dnaA protein VAB027_10 PF02091 Glycyl-tRNA synthetase alpha subunit VAB027_100 PF06969 HemN C-terminal domain VAB027_100 PF04055 Radical SAM superfamily VAB027_1004 PF04717 Type VI secretion system, phage-baseplate injector VAB027_1004 PF16671 Actin cross-linking domain VAB027_1005 PF05638 Type VI secretion system effector, Hcp VAB027_1006 PF00128 Alpha amylase, catalytic domain VAB027_1006 PF02806 Alpha amylase, C-terminal all-beta domain VAB027_1006 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAB027_1007 PF02446 4-alpha-glucanotransferase VAB027_1008 PF00343 Carbohydrate phosphorylase VAB027_1009 PF17874 MalT-like TPR region VAB027_1009 PF00196 Bacterial regulatory proteins, luxR family VAB027_101 PF07219 HemY protein N-terminus VAB027_1010 PF10928 Protein of unknown function (DUF2810) VAB027_1013 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAB027_1013 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAB027_1014 PF01709 Transcriptional regulator VAB027_1019 PF13614 AAA domain VAB027_1019 PF18607 ParA helix turn helix domain VAB027_102 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VAB027_1020 PF08775 ParB family VAB027_1020 PF02195 ParB-like nuclease domain VAB027_1021 PF13416 Bacterial extracellular solute-binding protein VAB027_1022 PF13718 GNAT acetyltransferase 2 VAB027_1022 PF05127 Helicase VAB027_1024 PF00501 AMP-binding enzyme VAB027_1026 PF00106 short chain dehydrogenase VAB027_1028 PF00072 Response regulator receiver domain VAB027_1028 PF00486 Transcriptional regulatory protein, C terminal VAB027_1029 PF08521 Two-component sensor kinase N-terminal VAB027_1029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1029 PF00512 His Kinase A (phospho-acceptor) domain VAB027_103 PF02602 Uroporphyrinogen-III synthase HemD VAB027_1030 PF08019 Phosphoethanolamine transferase EptA/EptB VAB027_1030 PF00884 Sulfatase VAB027_1031 PF00005 ABC transporter VAB027_1031 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_1032 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1032 PF12911 N-terminal TM domain of oligopeptide transport permease C VAB027_1033 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1036 PF00072 Response regulator receiver domain VAB027_1037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1037 PF02895 Signal transducing histidine kinase, homodimeric domain VAB027_1037 PF09078 CheY binding VAB027_1037 PF01584 CheW-like domain VAB027_1037 PF01627 Hpt domain VAB027_1038 PF01584 CheW-like domain VAB027_1039 PF01584 CheW-like domain VAB027_104 PF03900 Porphobilinogen deaminase, C-terminal domain VAB027_104 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VAB027_1040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1040 PF02203 Tar ligand binding domain homologue VAB027_1040 PF00672 HAMP domain VAB027_1041 PF01739 CheR methyltransferase, SAM binding domain VAB027_1041 PF03705 CheR methyltransferase, all-alpha domain VAB027_1042 PF03975 CheD chemotactic sensory transduction VAB027_1043 PF01339 CheB methylesterase VAB027_1043 PF00072 Response regulator receiver domain VAB027_1047 PF00486 Transcriptional regulatory protein, C terminal VAB027_1047 PF00072 Response regulator receiver domain VAB027_1049 PF03412 Peptidase C39 family VAB027_1049 PF00664 ABC transporter transmembrane region VAB027_1049 PF00005 ABC transporter VAB027_105 PF01295 Adenylate cyclase, class-I VAB027_105 PF12633 Adenylate cyclase NT domain VAB027_1053 PF00529 HlyD membrane-fusion protein of T1SS VAB027_1054 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VAB027_1054 PF01243 Pyridoxamine 5'-phosphate oxidase VAB027_1055 PF00196 Bacterial regulatory proteins, luxR family VAB027_1055 PF00072 Response regulator receiver domain VAB027_1057 PF03781 Sulfatase-modifying factor enzyme 1 VAB027_106 PF01491 Frataxin-like domain VAB027_1060 PF12833 Helix-turn-helix domain VAB027_1061 PF14850 DNA-binding domain of Proline dehydrogenase VAB027_1061 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VAB027_1061 PF01619 Proline dehydrogenase VAB027_1061 PF00171 Aldehyde dehydrogenase family VAB027_1063 PF00474 Sodium:solute symporter family VAB027_1065 PF00672 HAMP domain VAB027_1065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1065 PF02743 Cache domain VAB027_1066 PF01037 Lrp/AsnC ligand binding domain VAB027_1067 PF00171 Aldehyde dehydrogenase family VAB027_1068 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VAB027_1068 PF01276 Orn/Lys/Arg decarboxylase, major domain VAB027_1068 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VAB027_1069 PF13520 Amino acid permease VAB027_107 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VAB027_107 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VAB027_1070 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VAB027_1071 PF04013 Putative SAM-dependent RNA methyltransferase VAB027_1072 PF03466 LysR substrate binding domain VAB027_1072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1073 PF00106 short chain dehydrogenase VAB027_1074 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1074 PF00672 HAMP domain VAB027_1074 PF02743 Cache domain VAB027_1075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1075 PF03466 LysR substrate binding domain VAB027_1076 PF13460 NAD(P)H-binding VAB027_1078 PF00857 Isochorismatase family VAB027_108 PF01678 Diaminopimelate epimerase VAB027_1081 PF00892 EamA-like transporter family VAB027_1086 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAB027_1087 PF05068 Mannitol repressor VAB027_1088 PF08125 Mannitol dehydrogenase C-terminal domain VAB027_1088 PF01232 Mannitol dehydrogenase Rossmann domain VAB027_1089 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAB027_1089 PF02378 Phosphotransferase system, EIIC VAB027_1089 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAB027_109 PF04340 Protein of unknown function, DUF484 VAB027_1090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAB027_1090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAB027_1090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAB027_1090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAB027_1091 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1092 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_1093 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1094 PF00005 ABC transporter VAB027_1095 PF00793 DAHP synthetase I family VAB027_1097 PF00672 HAMP domain VAB027_1097 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_11 PF01169 Uncharacterized protein family UPF0016 VAB027_110 PF02899 Phage integrase, N-terminal SAM-like domain VAB027_110 PF00589 Phage integrase family VAB027_1100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1100 PF12729 Four helix bundle sensory module for signal transduction VAB027_1100 PF00672 HAMP domain VAB027_1102 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAB027_1102 PF00128 Alpha amylase, catalytic domain VAB027_1103 PF02264 LamB porin VAB027_1104 PF07148 Maltose operon periplasmic protein precursor (MalM) VAB027_1106 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VAB027_111 PF13419 Haloacid dehalogenase-like hydrolase VAB027_1110 PF03466 LysR substrate binding domain VAB027_1110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1111 PF07681 DoxX VAB027_1112 PF06029 AlkA N-terminal domain VAB027_1112 PF00730 HhH-GPD superfamily base excision DNA repair protein VAB027_1113 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAB027_1113 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VAB027_1115 PF03600 Citrate transporter VAB027_1116 PF07670 Nucleoside recognition VAB027_1117 PF07670 Nucleoside recognition VAB027_1118 PF00462 Glutaredoxin VAB027_1119 PF00892 EamA-like transporter family VAB027_112 PF08495 FIST N domain VAB027_112 PF00990 Diguanylate cyclase, GGDEF domain VAB027_112 PF00563 EAL domain VAB027_112 PF10442 FIST C domain VAB027_1120 PF13609 Gram-negative porin VAB027_1121 PF02566 OsmC-like protein VAB027_1122 PF01047 MarR family VAB027_1123 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAB027_1126 PF12833 Helix-turn-helix domain VAB027_1127 PF01810 LysE type translocator VAB027_1129 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAB027_1131 PF00005 ABC transporter VAB027_1131 PF00664 ABC transporter transmembrane region VAB027_1133 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAB027_1135 PF03466 LysR substrate binding domain VAB027_1135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1136 PF00271 Helicase conserved C-terminal domain VAB027_1136 PF00270 DEAD/DEAH box helicase VAB027_1137 PF01797 Transposase IS200 like VAB027_1140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1140 PF08447 PAS fold VAB027_1141 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VAB027_1141 PF02896 PEP-utilising enzyme, TIM barrel domain VAB027_1141 PF00391 PEP-utilising enzyme, mobile domain VAB027_1142 PF03618 Kinase/pyrophosphorylase VAB027_1144 PF01070 FMN-dependent dehydrogenase VAB027_1145 PF02652 L-lactate permease VAB027_1146 PF03466 LysR substrate binding domain VAB027_1146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1148 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1148 PF00672 HAMP domain VAB027_1148 PF02743 Cache domain VAB027_1149 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_1150 PF00005 ABC transporter VAB027_1150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_1152 PF13654 AAA domain VAB027_1152 PF05362 Lon protease (S16) C-terminal proteolytic domain VAB027_1153 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1153 PF00672 HAMP domain VAB027_1153 PF17200 Single Cache domain 2 VAB027_1155 PF07690 Major Facilitator Superfamily VAB027_1157 PF06865 Pyrimidine/purine nucleoside phosphorylase VAB027_1158 PF02678 Pirin VAB027_1158 PF05726 Pirin C-terminal cupin domain VAB027_116 PF12146 Serine aminopeptidase, S33 VAB027_1160 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1160 PF00563 EAL domain VAB027_1161 PF03466 LysR substrate binding domain VAB027_1161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1165 PF03707 Bacterial signalling protein N terminal repeat VAB027_1165 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1165 PF00563 EAL domain VAB027_1168 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1169 PF01047 MarR family VAB027_117 PF01810 LysE type translocator VAB027_1170 PF00072 Response regulator receiver domain VAB027_1170 PF01584 CheW-like domain VAB027_1172 PF00196 Bacterial regulatory proteins, luxR family VAB027_1173 PF01906 Putative heavy-metal-binding VAB027_1176 PF13302 Acetyltransferase (GNAT) domain VAB027_1177 PF08402 TOBE domain VAB027_1177 PF00005 ABC transporter VAB027_1178 PF01547 Bacterial extracellular solute-binding protein VAB027_1179 PF14785 Maltose transport system permease protein MalF P2 domain VAB027_1179 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_118 PF08668 HDOD domain VAB027_118 PF00563 EAL domain VAB027_1180 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1183 PF08220 DeoR-like helix-turn-helix domain VAB027_1183 PF00455 DeoR C terminal sensor domain VAB027_1184 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1184 PF08448 PAS fold VAB027_1189 PF00313 'Cold-shock' DNA-binding domain VAB027_119 PF00210 Ferritin-like domain VAB027_1190 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1190 PF17151 Periplasmic sensor domain VAB027_1192 PF05661 Protein of unknown function (DUF808) VAB027_1193 PF05958 tRNA (Uracil-5-)-methyltransferase VAB027_1194 PF01979 Amidohydrolase family VAB027_1195 PF00111 2Fe-2S iron-sulfur cluster binding domain VAB027_1195 PF03473 MOSC domain VAB027_1195 PF03476 MOSC N-terminal beta barrel domain VAB027_1195 PF03473 MOSC domain VAB027_1195 PF03476 MOSC N-terminal beta barrel domain VAB027_1195 PF00111 2Fe-2S iron-sulfur cluster binding domain VAB027_1196 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1196 PF00672 HAMP domain VAB027_1196 PF02743 Cache domain VAB027_1202 PF00005 ABC transporter VAB027_1203 PF01032 FecCD transport family VAB027_1204 PF01497 Periplasmic binding protein VAB027_1205 PF02472 Biopolymer transport protein ExbD/TolR VAB027_1206 PF01618 MotA/TolQ/ExbB proton channel family VAB027_1207 PF03544 Gram-negative bacterial TonB protein C-terminal VAB027_1208 PF04055 Radical SAM superfamily VAB027_1209 PF06228 Haem utilisation ChuX/HutX VAB027_1210 PF01243 Pyridoxamine 5'-phosphate oxidase VAB027_1211 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1211 PF00672 HAMP domain VAB027_1212 PF02595 Glycerate kinase family VAB027_1217 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VAB027_1217 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAB027_1218 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VAB027_1219 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VAB027_1219 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VAB027_1220 PF01966 HD domain VAB027_1225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_1226 PF03466 LysR substrate binding domain VAB027_1226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1227 PF01053 Cys/Met metabolism PLP-dependent enzyme VAB027_1228 PF00155 Aminotransferase class I and II VAB027_1229 PF00107 Zinc-binding dehydrogenase VAB027_1229 PF08240 Alcohol dehydrogenase GroES-like domain VAB027_1230 PF17848 Acetyl-coA carboxylase zinc finger domain VAB027_1230 PF01039 Carboxyl transferase domain VAB027_1231 PF17848 Acetyl-coA carboxylase zinc finger domain VAB027_1231 PF01039 Carboxyl transferase domain VAB027_1237 PF13333 Integrase core domain VAB027_1237 PF00665 Integrase core domain VAB027_1237 PF13276 HTH-like domain VAB027_1238 PF00589 Phage integrase family VAB027_1238 PF12167 Arm DNA-binding domain VAB027_1241 PF01381 Helix-turn-helix VAB027_1241 PF00717 Peptidase S24-like VAB027_1244 PF03354 Phage Terminase VAB027_1249 PF00313 'Cold-shock' DNA-binding domain VAB027_125 PF00448 SRP54-type protein, GTPase domain VAB027_125 PF02881 SRP54-type protein, helical bundle domain VAB027_1251 PF13737 Transposase DDE domain VAB027_1253 PF00576 HIUase/Transthyretin family VAB027_1254 PF03928 Haem-degrading VAB027_1255 PF01609 Transposase DDE domain VAB027_1255 PF13006 Insertion element 4 transposase N-terminal VAB027_1256 PF00027 Cyclic nucleotide-binding domain VAB027_1256 PF13545 Crp-like helix-turn-helix domain VAB027_1257 PF00485 Phosphoribulokinase / Uridine kinase family VAB027_1258 PF06794 Uncharacterised protein family (UPF0270) VAB027_1259 PF00561 alpha/beta hydrolase fold VAB027_126 PF00005 ABC transporter VAB027_1261 PF12848 ABC transporter VAB027_1261 PF00005 ABC transporter VAB027_1262 PF02525 Flavodoxin-like fold VAB027_1264 PF00999 Sodium/hydrogen exchanger family VAB027_1264 PF02254 TrkA-N domain VAB027_1265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAB027_1266 PF01112 Asparaginase VAB027_1267 PF00709 Adenylosuccinate synthetase VAB027_1268 PF08238 Sel1 repeat VAB027_1269 PF11893 Domain of unknown function (DUF3413) VAB027_1269 PF00884 Sulfatase VAB027_127 PF18075 FtsX extracellular domain VAB027_1270 PF17876 Cold shock domain VAB027_1270 PF08461 Ribonuclease R winged-helix domain VAB027_1270 PF08206 Ribonuclease B OB domain VAB027_1270 PF00575 S1 RNA binding domain VAB027_1270 PF00773 RNB domain VAB027_1271 PF00588 SpoU rRNA Methylase family VAB027_1271 PF08032 RNA 2'-O ribose methyltransferase substrate binding VAB027_1272 PF00338 Ribosomal protein S10p/S20e VAB027_1273 PF00297 Ribosomal protein L3 VAB027_1274 PF00573 Ribosomal protein L4/L1 family VAB027_1275 PF00276 Ribosomal protein L23 VAB027_1276 PF00181 Ribosomal Proteins L2, RNA binding domain VAB027_1276 PF03947 Ribosomal Proteins L2, C-terminal domain VAB027_1277 PF00203 Ribosomal protein S19 VAB027_1278 PF00237 Ribosomal protein L22p/L17e VAB027_1279 PF00189 Ribosomal protein S3, C-terminal domain VAB027_1279 PF07650 KH domain VAB027_128 PF04542 Sigma-70 region 2 VAB027_128 PF04545 Sigma-70, region 4 VAB027_128 PF00140 Sigma-70 factor, region 1.2 VAB027_1280 PF00252 Ribosomal protein L16p/L10e VAB027_1281 PF00831 Ribosomal L29 protein VAB027_1282 PF00366 Ribosomal protein S17 VAB027_1283 PF00238 Ribosomal protein L14p/L23e VAB027_1284 PF00467 KOW motif VAB027_1284 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VAB027_1285 PF00281 Ribosomal protein L5 VAB027_1285 PF00673 ribosomal L5P family C-terminus VAB027_1286 PF00253 Ribosomal protein S14p/S29e VAB027_1287 PF00410 Ribosomal protein S8 VAB027_1288 PF00347 Ribosomal protein L6 VAB027_1289 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VAB027_129 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_129 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAB027_1290 PF00333 Ribosomal protein S5, N-terminal domain VAB027_1290 PF03719 Ribosomal protein S5, C-terminal domain VAB027_1291 PF00327 Ribosomal protein L30p/L7e VAB027_1292 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VAB027_1293 PF00344 SecY translocase VAB027_1294 PF00444 Ribosomal protein L36 VAB027_1295 PF00416 Ribosomal protein S13/S18 VAB027_1296 PF00411 Ribosomal protein S11 VAB027_1297 PF01479 S4 domain VAB027_1297 PF00163 Ribosomal protein S4/S9 N-terminal domain VAB027_1298 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VAB027_1298 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VAB027_1298 PF01000 RNA polymerase Rpb3/RpoA insert domain VAB027_1299 PF01196 Ribosomal protein L17 VAB027_13 PF01206 Sulfurtransferase TusA VAB027_130 PF00440 Bacterial regulatory proteins, tetR family VAB027_1301 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAB027_1301 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAB027_1302 PF00892 EamA-like transporter family VAB027_1303 PF04225 Opacity-associated protein A LysM-like domain VAB027_1303 PF08525 Opacity-associated protein A N-terminal motif VAB027_1304 PF13673 Acetyltransferase (GNAT) domain VAB027_1305 PF00271 Helicase conserved C-terminal domain VAB027_1305 PF03880 DbpA RNA binding domain VAB027_1305 PF00270 DEAD/DEAH box helicase VAB027_1307 PF00149 Calcineurin-like phosphoesterase VAB027_1307 PF02872 5'-nucleotidase, C-terminal domain VAB027_1308 PF10414 Sirohaem synthase dimerisation region VAB027_1308 PF14824 Sirohaem biosynthesis protein central VAB027_1308 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAB027_1309 PF01507 Phosphoadenosine phosphosulfate reductase family VAB027_1310 PF00009 Elongation factor Tu GTP binding domain VAB027_1315 PF00005 ABC transporter VAB027_1317 PF10795 Protein of unknown function (DUF2607) VAB027_1318 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VAB027_1319 PF01625 Peptide methionine sulfoxide reductase VAB027_132 PF05958 tRNA (Uracil-5-)-methyltransferase VAB027_1320 PF01103 Surface antigen VAB027_1320 PF07244 Surface antigen variable number repeat VAB027_1320 PF17243 POTRA domain TamA domain 1 VAB027_1321 PF04357 TamB, inner membrane protein subunit of TAM complex VAB027_1322 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VAB027_1323 PF00719 Inorganic pyrophosphatase VAB027_1324 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VAB027_1325 PF08245 Mur ligase middle domain VAB027_1325 PF02875 Mur ligase family, glutamate ligase domain VAB027_1325 PF01225 Mur ligase family, catalytic domain VAB027_1326 PF02441 Flavoprotein VAB027_1328 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1329 PF00005 ABC transporter VAB027_133 PF00593 TonB dependent receptor VAB027_133 PF07715 TonB-dependent Receptor Plug Domain VAB027_1330 PF04751 Protein of unknown function (DUF615) VAB027_1331 PF01523 Putative modulator of DNA gyrase VAB027_1332 PF01769 Divalent cation transporter VAB027_1332 PF00571 CBS domain VAB027_1332 PF03448 MgtE intracellular N domain VAB027_1333 PF00381 PTS HPr component phosphorylation site VAB027_1334 PF03668 P-loop ATPase protein family VAB027_1335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAB027_1336 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAB027_1337 PF00309 Sigma-54 factor, Activator interacting domain (AID) VAB027_1337 PF04963 Sigma-54 factor, core binding domain VAB027_1337 PF04552 Sigma-54, DNA binding domain VAB027_1338 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAB027_1338 PF00005 ABC transporter VAB027_1339 PF03968 OstA-like protein VAB027_134 PF01797 Transposase IS200 like VAB027_1342 PF01380 SIS domain VAB027_1342 PF00571 CBS domain VAB027_1343 PF01699 Sodium/calcium exchanger protein VAB027_1344 PF00005 ABC transporter VAB027_1345 PF02405 Permease MlaE VAB027_1346 PF02470 MlaD protein VAB027_1347 PF05494 MlaC protein VAB027_1349 PF01722 BolA-like protein VAB027_135 PF05922 Peptidase inhibitor I9 VAB027_135 PF00082 Subtilase family VAB027_135 PF04151 Bacterial pre-peptidase C-terminal domain VAB027_1350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAB027_1351 PF01553 Acyltransferase VAB027_1352 PF01042 Endoribonuclease L-PSP VAB027_1353 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VAB027_1353 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VAB027_1354 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAB027_1354 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAB027_1356 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAB027_1356 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAB027_1357 PF02562 PhoH-like protein VAB027_1357 PF13638 PIN domain VAB027_1358 PF00271 Helicase conserved C-terminal domain VAB027_1358 PF12137 RNA polymerase recycling family C-terminal VAB027_1358 PF00176 SNF2 family N-terminal domain VAB027_1358 PF18339 RapA N-terminal Tudor like domain 1 VAB027_1358 PF18337 RapA N-terminal Tudor like domain VAB027_1359 PF00849 RNA pseudouridylate synthase VAB027_1360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAB027_1360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAB027_1361 PF08264 Anticodon-binding domain of tRNA VAB027_1361 PF00133 tRNA synthetases class I (I, L, M and V) VAB027_1361 PF10458 Valyl tRNA synthetase tRNA binding arm VAB027_1362 PF04364 DNA polymerase III chi subunit, HolC VAB027_1363 PF02789 Cytosol aminopeptidase family, N-terminal domain VAB027_1363 PF00883 Cytosol aminopeptidase family, catalytic domain VAB027_1364 PF03739 Lipopolysaccharide export system permease LptF/LptG VAB027_1365 PF03739 Lipopolysaccharide export system permease LptF/LptG VAB027_1368 PF00072 Response regulator receiver domain VAB027_137 PF01177 Asp/Glu/Hydantoin racemase VAB027_1376 PF00881 Nitroreductase family VAB027_1377 PF00037 4Fe-4S binding domain VAB027_1379 PF04381 Putative exonuclease, RdgC VAB027_1380 PF00486 Transcriptional regulatory protein, C terminal VAB027_1380 PF00072 Response regulator receiver domain VAB027_1381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1381 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1381 PF00989 PAS fold VAB027_1381 PF11808 Phosphate regulon sensor protein PhoR VAB027_1382 PF12849 PBP superfamily domain VAB027_1383 PF02541 Ppx/GppA phosphatase family VAB027_1384 PF13090 Polyphosphate kinase C-terminal domain 2 VAB027_1384 PF02503 Polyphosphate kinase middle domain VAB027_1384 PF17941 Polyphosphate kinase C-terminal domain 1 VAB027_1384 PF13089 Polyphosphate kinase N-terminal domain VAB027_1385 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1386 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1387 PF00005 ABC transporter VAB027_1388 PF01895 PhoU domain VAB027_1389 PF03976 Polyphosphate kinase 2 (PPK2) VAB027_1390 PF03932 CutC family VAB027_1391 PF10417 C-terminal domain of 1-Cys peroxiredoxin VAB027_1391 PF00578 AhpC/TSA family VAB027_1392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1392 PF03466 LysR substrate binding domain VAB027_1393 PF01274 Malate synthase VAB027_1394 PF00463 Isocitrate lyase family VAB027_1395 PF00571 CBS domain VAB027_1396 PF02547 Queuosine biosynthesis protein VAB027_1397 PF01702 Queuine tRNA-ribosyltransferase VAB027_1398 PF02699 Preprotein translocase subunit VAB027_1399 PF13721 SecD export protein N-terminal TM region VAB027_1399 PF07549 SecD/SecF GG Motif VAB027_1399 PF02355 Protein export membrane protein VAB027_1400 PF02355 Protein export membrane protein VAB027_1400 PF07549 SecD/SecF GG Motif VAB027_1401 PF00459 Inositol monophosphatase family VAB027_1402 PF00588 SpoU rRNA Methylase family VAB027_1403 PF02082 Transcriptional regulator VAB027_1404 PF00266 Aminotransferase class-V VAB027_1405 PF01592 NifU-like N terminal domain VAB027_1406 PF01521 Iron-sulphur cluster biosynthesis VAB027_1407 PF07743 HSCB C-terminal oligomerisation domain VAB027_1407 PF00226 DnaJ domain VAB027_1408 PF00012 Hsp70 protein VAB027_1409 PF00111 2Fe-2S iron-sulfur cluster binding domain VAB027_1410 PF04384 Iron-sulphur cluster assembly VAB027_1411 PF00883 Cytosol aminopeptidase family, catalytic domain VAB027_1411 PF12404 Peptidase VAB027_1412 PF00334 Nucleoside diphosphate kinase VAB027_1413 PF04055 Radical SAM superfamily VAB027_1414 PF13464 Domain of unknown function (DUF4115) VAB027_1415 PF04551 GcpE protein VAB027_1416 PF13393 Histidyl-tRNA synthetase VAB027_1416 PF03129 Anticodon binding domain VAB027_1417 PF09976 Tetratricopeptide repeat-like domain VAB027_1418 PF13360 PQQ-like domain VAB027_1419 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VAB027_1419 PF01926 50S ribosome-binding GTPase VAB027_1421 PF02601 Exonuclease VII, large subunit VAB027_1421 PF13742 OB-fold nucleic acid binding domain VAB027_1423 PF00478 IMP dehydrogenase / GMP reductase domain VAB027_1423 PF00571 CBS domain VAB027_1424 PF02540 NAD synthase VAB027_1424 PF00117 Glutamine amidotransferase class-I VAB027_1424 PF00958 GMP synthase C terminal domain VAB027_1425 PF00704 Glycosyl hydrolases family 18 VAB027_1425 PF06483 Chitinase C VAB027_1426 PF01184 GPR1/FUN34/yaaH family VAB027_1427 PF00550 Phosphopantetheine attachment site VAB027_1427 PF00857 Isochorismatase family VAB027_1428 PF00501 AMP-binding enzyme VAB027_1428 PF13193 AMP-binding enzyme C-terminal domain VAB027_1429 PF00425 chorismate binding enzyme VAB027_143 PF00962 Adenosine/AMP deaminase VAB027_1432 PF01497 Periplasmic binding protein VAB027_1433 PF01032 FecCD transport family VAB027_1434 PF01032 FecCD transport family VAB027_1435 PF00005 ABC transporter VAB027_1436 PF01648 4'-phosphopantetheinyl transferase superfamily VAB027_1436 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VAB027_1437 PF01235 Sodium:alanine symporter family VAB027_1438 PF01266 FAD dependent oxidoreductase VAB027_144 PF03707 Bacterial signalling protein N terminal repeat VAB027_144 PF13188 PAS domain VAB027_144 PF00563 EAL domain VAB027_144 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1442 PF00072 Response regulator receiver domain VAB027_1442 PF12431 Transcriptional regulator VAB027_1443 PF17203 Single cache domain 3 VAB027_1443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1444 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VAB027_1445 PF00682 HMGL-like VAB027_1445 PF00364 Biotin-requiring enzyme VAB027_1445 PF02436 Conserved carboxylase domain VAB027_1446 PF04277 Oxaloacetate decarboxylase, gamma chain VAB027_1447 PF03390 2-hydroxycarboxylate transporter family VAB027_1448 PF08218 Citrate lyase ligase C-terminal domain VAB027_1449 PF06857 Malonate decarboxylase delta subunit (MdcD) VAB027_145 PF00072 Response regulator receiver domain VAB027_145 PF00158 Sigma-54 interaction domain VAB027_145 PF02954 Bacterial regulatory protein, Fis family VAB027_1450 PF03328 HpcH/HpaI aldolase/citrate lyase family VAB027_1451 PF04223 Citrate lyase, alpha subunit (CitF) VAB027_1452 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VAB027_1453 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VAB027_1455 PF08032 RNA 2'-O ribose methyltransferase substrate binding VAB027_1455 PF00588 SpoU rRNA Methylase family VAB027_1456 PF11953 Domain of unknown function (DUF3470) VAB027_1456 PF00037 4Fe-4S binding domain VAB027_146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_146 PF00512 His Kinase A (phospho-acceptor) domain VAB027_146 PF00989 PAS fold VAB027_1460 PF02384 N-6 DNA Methylase VAB027_1461 PF01420 Type I restriction modification DNA specificity domain VAB027_1462 PF11867 Domain of unknown function (DUF3387) VAB027_1462 PF18766 SWI2/SNF2 ATPase VAB027_1462 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VAB027_1465 PF01381 Helix-turn-helix VAB027_1474 PF00075 RNase H VAB027_1477 PF04002 RadC-like JAB domain VAB027_148 PF03951 Glutamine synthetase, beta-Grasp domain VAB027_148 PF00120 Glutamine synthetase, catalytic domain VAB027_1489 PF00589 Phage integrase family VAB027_1489 PF13356 Arm DNA-binding domain VAB027_1490 PF01668 SmpB protein VAB027_1491 PF03364 Polyketide cyclase / dehydrase and lipid transport VAB027_1492 PF03658 RnfH family Ubiquitin VAB027_1493 PF04355 SmpA / OmlA family VAB027_1494 PF02463 RecF/RecN/SMC N terminal domain VAB027_1495 PF01513 ATP-NAD kinase VAB027_1496 PF01025 GrpE VAB027_1497 PF00012 Hsp70 protein VAB027_1498 PF01556 DnaJ C terminal domain VAB027_1498 PF00226 DnaJ domain VAB027_1498 PF00684 DnaJ central domain VAB027_1499 PF07963 Prokaryotic N-terminal methylation motif VAB027_1499 PF00114 Pilin (bacterial filament) VAB027_15 PF08240 Alcohol dehydrogenase GroES-like domain VAB027_15 PF00107 Zinc-binding dehydrogenase VAB027_1505 PF03806 AbgT putative transporter family VAB027_1506 PF14437 MafB19-like deaminase VAB027_1508 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_1508 PF01464 Transglycosylase SLT domain VAB027_1509 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VAB027_1509 PF02769 AIR synthase related protein, C-terminal domain VAB027_1509 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VAB027_1511 PF06786 Uncharacterised protein family (UPF0253) VAB027_1513 PF03129 Anticodon binding domain VAB027_1513 PF04073 Aminoacyl-tRNA editing domain VAB027_1513 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAB027_1514 PF01980 tRNA-methyltransferase O VAB027_1514 PF18389 TrmO C-terminal domain VAB027_1515 PF01197 Ribosomal protein L31 VAB027_1516 PF00444 Ribosomal protein L36 VAB027_1517 PF03806 AbgT putative transporter family VAB027_1518 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VAB027_152 PF03631 Virulence factor BrkB VAB027_1521 PF13302 Acetyltransferase (GNAT) domain VAB027_1522 PF13006 Insertion element 4 transposase N-terminal VAB027_1522 PF01609 Transposase DDE domain VAB027_1524 PF04287 tRNA pseudouridine synthase C VAB027_1525 PF00849 RNA pseudouridylate synthase VAB027_1526 PF02780 Transketolase, C-terminal domain VAB027_1526 PF02779 Transketolase, pyrimidine binding domain VAB027_1526 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VAB027_1527 PF00348 Polyprenyl synthetase VAB027_1528 PF02609 Exonuclease VII small subunit VAB027_1529 PF01618 MotA/TolQ/ExbB proton channel family VAB027_153 PF02580 D-Tyr-tRNA(Tyr) deacylase VAB027_1530 PF00691 OmpA family VAB027_1530 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAB027_1531 PF02926 THUMP domain VAB027_1531 PF02568 Thiamine biosynthesis protein (ThiI) VAB027_1532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1532 PF03466 LysR substrate binding domain VAB027_1533 PF04241 Protein of unknown function (DUF423) VAB027_1534 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAB027_1534 PF01367 5'-3' exonuclease, C-terminal SAM fold VAB027_1535 PF11892 Domain of unknown function (DUF3412) VAB027_1535 PF03641 Possible lysine decarboxylase VAB027_1535 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VAB027_1536 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1538 PF14489 QueF-like protein VAB027_1538 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VAB027_1539 PF07348 Syd protein (SUKH-2) VAB027_154 PF09500 Putative thioesterase (yiiD_Cterm) VAB027_154 PF00583 Acetyltransferase (GNAT) family VAB027_1540 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VAB027_1541 PF03180 NLPA lipoprotein VAB027_1542 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1543 PF09383 NIL domain VAB027_1543 PF00005 ABC transporter VAB027_1545 PF00356 Bacterial regulatory proteins, lacI family VAB027_1546 PF00367 phosphotransferase system, EIIB VAB027_1546 PF02378 Phosphotransferase system, EIIC VAB027_1547 PF16657 Maltogenic Amylase, C-terminal domain VAB027_1547 PF00128 Alpha amylase, catalytic domain VAB027_1551 PF13533 Biotin-lipoyl like VAB027_1552 PF00873 AcrB/AcrD/AcrF family VAB027_1554 PF01381 Helix-turn-helix VAB027_1554 PF00717 Peptidase S24-like VAB027_1555 PF13693 Winged helix-turn-helix DNA-binding VAB027_1556 PF09299 Mu transposase, C-terminal VAB027_1556 PF09039 Mu DNA binding, I gamma subdomain VAB027_1556 PF02914 Bacteriophage Mu transposase VAB027_1556 PF02316 Mu DNA-binding domain VAB027_1557 PF13401 AAA domain VAB027_1557 PF09077 Mu B transposition protein, C terminal VAB027_156 PF01293 Phosphoenolpyruvate carboxykinase VAB027_157 PF01430 Hsp33 protein VAB027_1579 PF10805 Protein of unknown function (DUF2730) VAB027_158 PF01479 S4 domain VAB027_1580 PF08461 Ribonuclease R winged-helix domain VAB027_1581 PF11985 Protein of unknown function (DUF3486) VAB027_1582 PF03237 Terminase-like family VAB027_1583 PF06074 Protein of unknown function (DUF935) VAB027_1588 PF10124 Mu-like prophage major head subunit gpT VAB027_159 PF11356 Type II secretion system protein C VAB027_1590 PF07030 Protein of unknown function (DUF1320) VAB027_1594 PF04984 Phage tail sheath protein subtilisin-like domain VAB027_1594 PF17482 Phage tail sheath C-terminal domain VAB027_1596 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 VAB027_16 PF00585 C-terminal regulatory domain of Threonine dehydratase VAB027_16 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_160 PF03958 Bacterial type II/III secretion system short domain VAB027_160 PF00263 Bacterial type II and III secretion system protein VAB027_1600 PF06890 Bacteriophage Mu Gp45 protein VAB027_1602 PF04865 Baseplate J-like protein VAB027_1603 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) VAB027_1606 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAB027_1608 PF02350 UDP-N-acetylglucosamine 2-epimerase VAB027_1609 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VAB027_1609 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAB027_1609 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAB027_161 PF00437 Type II/IV secretion system protein VAB027_1615 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_1617 PF00534 Glycosyl transferases group 1 VAB027_1617 PF00862 Sucrose synthase VAB027_1619 PF03808 Glycosyl transferase WecB/TagA/CpsF family VAB027_162 PF00482 Type II secretion system (T2SS), protein F VAB027_1622 PF17945 Beta/Gamma crystallin VAB027_1622 PF12561 ToxR activated gene A lipoprotein domain VAB027_1625 PF02397 Bacterial sugar transferase VAB027_1627 PF10531 SLBB domain VAB027_1627 PF02563 Polysaccharide biosynthesis/export protein VAB027_1627 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VAB027_1628 PF02706 Chain length determinant protein VAB027_1628 PF13807 G-rich domain on putative tyrosine kinase VAB027_1628 PF13614 AAA domain VAB027_163 PF08334 Type II secretion system (T2SS), protein G VAB027_163 PF07963 Prokaryotic N-terminal methylation motif VAB027_1632 PF00464 Serine hydroxymethyltransferase VAB027_1634 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VAB027_1634 PF04055 Radical SAM superfamily VAB027_1635 PF03099 Biotin/lipoate A/B protein ligase family VAB027_1636 PF04359 Protein of unknown function (DUF493) VAB027_1637 PF00768 D-alanyl-D-alanine carboxypeptidase VAB027_1637 PF07943 Penicillin-binding protein 5, C-terminal domain VAB027_1638 PF03330 Lytic transglycolase VAB027_1638 PF05036 Sporulation related domain VAB027_1639 PF01098 Cell cycle protein VAB027_164 PF12019 Type II transport protein GspH VAB027_1640 PF00905 Penicillin binding protein transpeptidase domain VAB027_1640 PF03717 Penicillin-binding Protein dimerisation domain VAB027_1641 PF02590 Predicted SPOUT methyltransferase VAB027_1643 PF06144 DNA polymerase III, delta subunit VAB027_1643 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VAB027_1644 PF04390 Lipopolysaccharide-assembly VAB027_1645 PF13603 Leucyl-tRNA synthetase, Domain 2 VAB027_1645 PF08264 Anticodon-binding domain of tRNA VAB027_1645 PF00133 tRNA synthetases class I (I, L, M and V) VAB027_1646 PF07295 Zinc-ribbon containing domain VAB027_1647 PF00795 Carbon-nitrogen hydrolase VAB027_1648 PF00571 CBS domain VAB027_1648 PF03471 Transporter associated domain VAB027_1649 PF02130 Uncharacterized protein family UPF0054 VAB027_165 PF02501 Type II secretion system (T2SS), protein I VAB027_165 PF07963 Prokaryotic N-terminal methylation motif VAB027_1650 PF02562 PhoH-like protein VAB027_1651 PF04055 Radical SAM superfamily VAB027_1651 PF01938 TRAM domain VAB027_1651 PF00919 Uncharacterized protein family UPF0004 VAB027_1652 PF01494 FAD binding domain VAB027_1653 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VAB027_1654 PF02896 PEP-utilising enzyme, TIM barrel domain VAB027_1654 PF05524 PEP-utilising enzyme, N-terminal VAB027_1654 PF00391 PEP-utilising enzyme, mobile domain VAB027_1655 PF00381 PTS HPr component phosphorylation site VAB027_1656 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_1658 PF04354 ZipA, C-terminal FtsZ-binding domain VAB027_1659 PF12826 Helix-hairpin-helix motif VAB027_1659 PF01653 NAD-dependent DNA ligase adenylation domain VAB027_1659 PF00533 BRCA1 C Terminus (BRCT) domain VAB027_1659 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VAB027_1659 PF03120 NAD-dependent DNA ligase OB-fold domain VAB027_166 PF11612 Type II secretion system (T2SS), protein J VAB027_166 PF07963 Prokaryotic N-terminal methylation motif VAB027_1660 PF13609 Gram-negative porin VAB027_1661 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VAB027_1662 PF13411 MerR HTH family regulatory protein VAB027_1663 PF01957 NfeD-like C-terminal, partner-binding VAB027_1664 PF01145 SPFH domain / Band 7 family VAB027_1664 PF16200 C-terminal region of band_7 VAB027_1665 PF00085 Thioredoxin VAB027_1666 PF00106 short chain dehydrogenase VAB027_1667 PF01370 NAD dependent epimerase/dehydratase family VAB027_1667 PF08338 Domain of unknown function (DUF1731) VAB027_1668 PF12850 Calcineurin-like phosphoesterase superfamily domain VAB027_167 PF03934 Type II secretion system (T2SS), protein K VAB027_1670 PF17323 Trans-membrane regulatory protein ToxS VAB027_1671 PF00486 Transcriptional regulatory protein, C terminal VAB027_1672 PF00183 Hsp90 protein VAB027_1672 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1673 PF05191 Adenylate kinase, active site lid VAB027_1674 PF00762 Ferrochelatase VAB027_1675 PF00854 POT family VAB027_1676 PF02357 Transcription termination factor nusG VAB027_1677 PF00733 Asparagine synthase VAB027_1677 PF13537 Glutamine amidotransferase domain VAB027_1678 PF00999 Sodium/hydrogen exchanger family VAB027_1678 PF02254 TrkA-N domain VAB027_1679 PF00480 ROK family VAB027_1679 PF01047 MarR family VAB027_168 PF12693 GspL periplasmic domain VAB027_168 PF05134 Type II secretion system (T2SS), protein L VAB027_1680 PF01979 Amidohydrolase family VAB027_1681 PF02378 Phosphotransferase system, EIIC VAB027_1681 PF00367 phosphotransferase system, EIIB VAB027_1681 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VAB027_1682 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAB027_1682 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VAB027_1684 PF01416 tRNA pseudouridine synthase VAB027_1685 PF01039 Carboxyl transferase domain VAB027_1685 PF17848 Acetyl-coA carboxylase zinc finger domain VAB027_1686 PF02875 Mur ligase family, glutamate ligase domain VAB027_1686 PF08245 Mur ligase middle domain VAB027_1687 PF05036 Sporulation related domain VAB027_1688 PF02674 Colicin V production protein VAB027_1689 PF00156 Phosphoribosyl transferase domain VAB027_169 PF04612 Type II secretion system (T2SS), protein M VAB027_1690 PF03553 Na+/H+ antiporter family VAB027_1690 PF13726 Na+-H+ antiporter family VAB027_1691 PF00929 Exonuclease VAB027_1692 PF18393 MotY N-terminal domain VAB027_1692 PF00691 OmpA family VAB027_1693 PF10952 Protein of unknown function (DUF2753) VAB027_1694 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_1695 PF10576 Iron-sulfur binding domain of endonuclease III VAB027_1695 PF00730 HhH-GPD superfamily base excision DNA repair protein VAB027_1695 PF00633 Helix-hairpin-helix motif VAB027_1696 PF02508 Rnf-Nqr subunit, membrane protein VAB027_1697 PF04205 FMN-binding domain VAB027_1698 PF03116 NQR2, RnfD, RnfE family VAB027_1699 PF10531 SLBB domain VAB027_1699 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VAB027_1699 PF13375 RnfC Barrel sandwich hybrid domain VAB027_1699 PF12838 4Fe-4S dicluster domain VAB027_17 PF00920 Dehydratase family VAB027_170 PF01203 Type II secretion system (T2SS), protein N VAB027_1700 PF04060 Putative Fe-S cluster VAB027_1701 PF02508 Rnf-Nqr subunit, membrane protein VAB027_1703 PF02151 UvrB/uvrC motif VAB027_1703 PF17757 UvrB interaction domain VAB027_1703 PF00271 Helicase conserved C-terminal domain VAB027_1703 PF04851 Type III restriction enzyme, res subunit VAB027_1703 PF12344 Ultra-violet resistance protein B VAB027_1704 PF00158 Sigma-54 interaction domain VAB027_1704 PF00072 Response regulator receiver domain VAB027_1704 PF02954 Bacterial regulatory protein, Fis family VAB027_1705 PF01933 Uncharacterised protein family UPF0052 VAB027_1706 PF01627 Hpt domain VAB027_1707 PF06463 Molybdenum Cofactor Synthesis C VAB027_1707 PF04055 Radical SAM superfamily VAB027_1708 PF00994 Probable molybdopterin binding domain VAB027_1709 PF01967 MoaC family VAB027_171 PF00459 Inositol monophosphatase family VAB027_1710 PF02597 ThiS family VAB027_1711 PF02391 MoaE protein VAB027_1712 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1712 PF07694 5TMR of 5TMR-LYT VAB027_1713 PF00571 CBS domain VAB027_1713 PF07085 DRTGG domain VAB027_1713 PF00392 Bacterial regulatory proteins, gntR family VAB027_1713 PF03061 Thioesterase superfamily VAB027_1714 PF00403 Heavy-metal-associated domain VAB027_1715 PF01048 Phosphorylase superfamily VAB027_1717 PF09334 tRNA synthetases class I (M) VAB027_1717 PF01588 Putative tRNA binding domain VAB027_1718 PF10609 NUBPL iron-transfer P-loop NTPase VAB027_1719 PF00485 Phosphoribulokinase / Uridine kinase family VAB027_172 PF00293 NUDIX domain VAB027_1720 PF05170 AsmA family VAB027_1721 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VAB027_1721 PF12557 Cob(I)alamin adenosyltransferase N terminal VAB027_1722 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAB027_1723 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAB027_1724 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAB027_1726 PF04542 Sigma-70 region 2 VAB027_1726 PF08281 Sigma-70, region 4 VAB027_1727 PF02803 Thiolase, C-terminal domain VAB027_1727 PF00108 Thiolase, N-terminal domain VAB027_1728 PF00378 Enoyl-CoA hydratase/isomerase VAB027_1728 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAB027_1728 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAB027_1729 PF00881 Nitroreductase family VAB027_173 PF01106 NifU-like domain VAB027_173 PF01521 Iron-sulphur cluster biosynthesis VAB027_1730 PF03466 LysR substrate binding domain VAB027_1730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_1731 PF00072 Response regulator receiver domain VAB027_1733 PF04304 Protein of unknown function (DUF454) VAB027_1734 PF00156 Phosphoribosyl transferase domain VAB027_1735 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VAB027_1735 PF12169 DNA polymerase III subunits gamma and tau domain III VAB027_1735 PF12170 DNA polymerase III tau subunit V interacting with alpha VAB027_1736 PF02575 YbaB/EbfC DNA-binding family VAB027_1737 PF02132 RecR protein VAB027_1737 PF13662 Toprim domain VAB027_1738 PF03692 Putative zinc- or iron-chelating domain VAB027_1739 PF03692 Putative zinc- or iron-chelating domain VAB027_174 PF00156 Phosphoribosyl transferase domain VAB027_1743 PF00106 short chain dehydrogenase VAB027_1744 PF08496 Peptidase family S49 N-terminal VAB027_1744 PF01343 Peptidase family S49 VAB027_1745 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_1746 PF13404 AsnC-type helix-turn-helix domain VAB027_1746 PF01037 Lrp/AsnC ligand binding domain VAB027_1749 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAB027_175 PF00561 alpha/beta hydrolase fold VAB027_1751 PF08448 PAS fold VAB027_1751 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1752 PF01022 Bacterial regulatory protein, arsR family VAB027_1753 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_1753 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAB027_1756 PF00704 Glycosyl hydrolases family 18 VAB027_1756 PF06483 Chitinase C VAB027_1758 PF01161 Phosphatidylethanolamine-binding protein VAB027_1761 PF03481 Putative GTP-binding controlling metal-binding VAB027_1761 PF01300 Telomere recombination VAB027_1764 PF00072 Response regulator receiver domain VAB027_1766 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1766 PF00989 PAS fold VAB027_1766 PF13188 PAS domain VAB027_1766 PF13426 PAS domain VAB027_1767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1767 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1768 PF13188 PAS domain VAB027_1768 PF00563 EAL domain VAB027_1768 PF03707 Bacterial signalling protein N terminal repeat VAB027_1768 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1769 PF02954 Bacterial regulatory protein, Fis family VAB027_1769 PF00072 Response regulator receiver domain VAB027_1769 PF00158 Sigma-54 interaction domain VAB027_177 PF17674 HHH domain VAB027_177 PF16921 Tex protein YqgF-like domain VAB027_177 PF09371 Tex-like protein N-terminal domain VAB027_177 PF00575 S1 RNA binding domain VAB027_1770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1770 PF08448 PAS fold VAB027_1770 PF00072 Response regulator receiver domain VAB027_1770 PF13188 PAS domain VAB027_1770 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1772 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAB027_1773 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1774 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_1774 PF12911 N-terminal TM domain of oligopeptide transport permease C VAB027_1775 PF00005 ABC transporter VAB027_1775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_1776 PF00005 ABC transporter VAB027_1776 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_1777 PF13409 Glutathione S-transferase, N-terminal domain VAB027_1778 PF01515 Phosphate acetyl/butaryl transferase VAB027_1778 PF07085 DRTGG domain VAB027_1779 PF00871 Acetokinase family VAB027_178 PF03449 Transcription elongation factor, N-terminal VAB027_178 PF01272 Transcription elongation factor, GreA/GreB, C-term VAB027_1780 PF04217 Protein of unknown function, DUF412 VAB027_1781 PF09905 DNA-binding protein VF530 VAB027_1783 PF02653 Branched-chain amino acid transport system / permease component VAB027_1784 PF00005 ABC transporter VAB027_1785 PF01207 Dihydrouridine synthase (Dus) VAB027_1786 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1786 PF05230 MASE2 domain VAB027_1787 PF07516 SecA Wing and Scaffold domain VAB027_1787 PF01043 SecA preprotein cross-linking domain VAB027_1787 PF02810 SEC-C motif VAB027_1787 PF07517 SecA DEAD-like domain VAB027_1788 PF03548 Outer membrane lipoprotein carrier protein LolA VAB027_1789 PF16193 AAA C-terminal domain VAB027_1789 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_1789 PF12002 MgsA AAA+ ATPase C terminal VAB027_179 PF00990 Diguanylate cyclase, GGDEF domain VAB027_179 PF17152 Periplasmic sensor domain VAB027_1790 PF02403 Seryl-tRNA synthetase N-terminal domain VAB027_1790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAB027_1793 PF06968 Biotin and Thiamin Synthesis associated domain VAB027_1793 PF04055 Radical SAM superfamily VAB027_1794 PF00155 Aminotransferase class I and II VAB027_1795 PF08241 Methyltransferase domain VAB027_1798 PF01435 Peptidase family M48 VAB027_18 PF01063 Amino-transferase class IV VAB027_180 PF00486 Transcriptional regulatory protein, C terminal VAB027_180 PF00072 Response regulator receiver domain VAB027_1800 PF00106 short chain dehydrogenase VAB027_1805 PF16036 Chalcone isomerase-like VAB027_1807 PF00206 Lyase VAB027_1807 PF08328 Adenylosuccinate lyase C-terminal VAB027_1808 PF04356 Protein of unknown function (DUF489) VAB027_181 PF00672 HAMP domain VAB027_181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_181 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1810 PF00294 pfkB family carbohydrate kinase VAB027_1811 PF00816 H-NS histone family VAB027_1812 PF03553 Na+/H+ antiporter family VAB027_1813 PF01634 ATP phosphoribosyltransferase VAB027_1813 PF08029 HisG, C-terminal domain VAB027_1814 PF00815 Histidinol dehydrogenase VAB027_1815 PF00155 Aminotransferase class I and II VAB027_1816 PF08645 Polynucleotide kinase 3 phosphatase VAB027_1816 PF00475 Imidazoleglycerol-phosphate dehydratase VAB027_1817 PF00117 Glutamine amidotransferase class-I VAB027_1818 PF00977 Histidine biosynthesis protein VAB027_1819 PF00977 Histidine biosynthesis protein VAB027_182 PF00860 Permease family VAB027_1820 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VAB027_1820 PF01502 Phosphoribosyl-AMP cyclohydrolase VAB027_1821 PF00849 RNA pseudouridylate synthase VAB027_1822 PF03971 Monomeric isocitrate dehydrogenase VAB027_1823 PF00313 'Cold-shock' DNA-binding domain VAB027_1824 PF02617 ATP-dependent Clp protease adaptor protein ClpS VAB027_1825 PF17871 AAA lid domain VAB027_1825 PF10431 C-terminal, D2-small domain, of ClpB protein VAB027_1825 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_1825 PF02861 Clp amino terminal domain, pathogenicity island component VAB027_1825 PF07724 AAA domain (Cdc48 subfamily) VAB027_1826 PF06826 Predicted Permease Membrane Region VAB027_1826 PF02080 TrkA-C domain VAB027_1827 PF00462 Glutaredoxin VAB027_1828 PF00171 Aldehyde dehydrogenase family VAB027_1828 PF00465 Iron-containing alcohol dehydrogenase VAB027_1829 PF01418 Helix-turn-helix domain, rpiR family VAB027_1829 PF01380 SIS domain VAB027_183 PF00271 Helicase conserved C-terminal domain VAB027_183 PF17191 RecG wedge domain VAB027_183 PF00270 DEAD/DEAH box helicase VAB027_1830 PF00282 Pyridoxal-dependent decarboxylase conserved domain VAB027_1832 PF03956 Lysine exporter LysO VAB027_1834 PF04994 TfoX C-terminal domain VAB027_1834 PF04993 TfoX N-terminal domain VAB027_1837 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1837 PF00989 PAS fold VAB027_1837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1839 PF00266 Aminotransferase class-V VAB027_184 PF04607 Region found in RelA / SpoT proteins VAB027_184 PF13291 ACT domain VAB027_184 PF02824 TGS domain VAB027_1842 PF18030 RimK PreATP-grasp domain VAB027_1842 PF08443 RimK-like ATP-grasp domain VAB027_1843 PF08003 Protein of unknown function (DUF1698) VAB027_1844 PF13649 Methyltransferase domain VAB027_1845 PF01904 Protein of unknown function DUF72 VAB027_1846 PF02938 GAD domain VAB027_1846 PF01336 OB-fold nucleic acid binding domain VAB027_1846 PF00152 tRNA synthetases class II (D, K and N) VAB027_1847 PF00265 Thymidine kinase VAB027_1848 PF00375 Sodium:dicarboxylate symporter family VAB027_1849 PF00290 Tryptophan synthase alpha chain VAB027_185 PF01192 RNA polymerase Rpb6 VAB027_1850 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_1851 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VAB027_1851 PF00218 Indole-3-glycerol phosphate synthase VAB027_1854 PF00117 Glutamine amidotransferase class-I VAB027_1855 PF00425 chorismate binding enzyme VAB027_1855 PF04715 Anthranilate synthase component I, N terminal region VAB027_1856 PF02811 PHP domain VAB027_1857 PF01300 Telomere recombination VAB027_1858 PF00849 RNA pseudouridylate synthase VAB027_1858 PF01479 S4 domain VAB027_1859 PF00664 ABC transporter transmembrane region VAB027_1859 PF00005 ABC transporter VAB027_186 PF00625 Guanylate kinase VAB027_1860 PF00664 ABC transporter transmembrane region VAB027_1860 PF00005 ABC transporter VAB027_1861 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_1863 PF00266 Aminotransferase class-V VAB027_1864 PF08448 PAS fold VAB027_1864 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1865 PF02698 DUF218 domain VAB027_1867 PF03949 Malic enzyme, NAD binding domain VAB027_1867 PF00390 Malic enzyme, N-terminal domain VAB027_1869 PF01259 SAICAR synthetase VAB027_187 PF02592 Putative vitamin uptake transporter VAB027_1873 PF00691 OmpA family VAB027_1873 PF13488 Glycine zipper VAB027_1876 PF02913 FAD linked oxidases, C-terminal domain VAB027_1876 PF13183 4Fe-4S dicluster domain VAB027_1876 PF01565 FAD binding domain VAB027_1877 PF04191 Phospholipid methyltransferase VAB027_1879 PF00089 Trypsin VAB027_1881 PF00221 Aromatic amino acid lyase VAB027_1882 PF01175 Urocanase Rossmann-like domain VAB027_1882 PF17391 Urocanase N-terminal domain VAB027_1882 PF17392 Urocanase C-terminal domain VAB027_1883 PF00491 Arginase family VAB027_1884 PF01979 Amidohydrolase family VAB027_1885 PF07702 UTRA domain VAB027_1885 PF00392 Bacterial regulatory proteins, gntR family VAB027_1887 PF04269 Protein of unknown function, DUF440 VAB027_1888 PF09285 Elongation factor P, C-terminal VAB027_1888 PF08207 Elongation factor P (EF-P) KOW-like domain VAB027_1888 PF01132 Elongation factor P (EF-P) OB domain VAB027_1890 PF03104 DNA polymerase family B, exonuclease domain VAB027_1890 PF00136 DNA polymerase family B VAB027_1891 PF13426 PAS domain VAB027_1891 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1891 PF00563 EAL domain VAB027_1892 PF00072 Response regulator receiver domain VAB027_1892 PF00196 Bacterial regulatory proteins, luxR family VAB027_1893 PF02151 UvrB/uvrC motif VAB027_1893 PF01541 GIY-YIG catalytic domain VAB027_1893 PF08459 UvrC Helix-hairpin-helix N-terminal VAB027_1894 PF01066 CDP-alcohol phosphatidyltransferase VAB027_1899 PF01797 Transposase IS200 like VAB027_1901 PF00072 Response regulator receiver domain VAB027_1901 PF00990 Diguanylate cyclase, GGDEF domain VAB027_1902 PF01409 tRNA synthetases class II core domain (F) VAB027_1902 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VAB027_1903 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VAB027_1903 PF01588 Putative tRNA binding domain VAB027_1903 PF03484 tRNA synthetase B5 domain VAB027_1903 PF03483 B3/4 domain VAB027_1903 PF03147 Ferredoxin-fold anticodon binding domain VAB027_1904 PF00216 Bacterial DNA-binding protein VAB027_1907 PF05724 Thiopurine S-methyltransferase (TPMT) VAB027_1908 PF02222 ATP-grasp domain VAB027_191 PF02080 TrkA-C domain VAB027_191 PF03471 Transporter associated domain VAB027_191 PF00999 Sodium/hydrogen exchanger family VAB027_1910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAB027_1910 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VAB027_1911 PF04172 LrgB-like family VAB027_1912 PF03788 LrgA family VAB027_1913 PF00929 Exonuclease VAB027_1913 PF08411 Exonuclease C-terminal VAB027_1915 PF01641 SelR domain VAB027_1916 PF02277 Phosphoribosyltransferase VAB027_1917 PF02654 Cobalamin-5-phosphate synthase VAB027_1918 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VAB027_192 PF00196 Bacterial regulatory proteins, luxR family VAB027_192 PF00072 Response regulator receiver domain VAB027_1920 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VAB027_1921 PF01032 FecCD transport family VAB027_1922 PF00005 ABC transporter VAB027_1925 PF17200 Single Cache domain 2 VAB027_1925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1925 PF00672 HAMP domain VAB027_1928 PF00994 Probable molybdopterin binding domain VAB027_193 PF02683 Cytochrome C biogenesis protein transmembrane region VAB027_193 PF11412 Disulphide bond corrector protein DsbC VAB027_1930 PF00970 Oxidoreductase FAD-binding domain VAB027_1930 PF00175 Oxidoreductase NAD-binding domain VAB027_1930 PF00111 2Fe-2S iron-sulfur cluster binding domain VAB027_1931 PF00268 Ribonucleotide reductase, small chain VAB027_1932 PF03477 ATP cone domain VAB027_1932 PF00317 Ribonucleotide reductase, all-alpha domain VAB027_1932 PF02867 Ribonucleotide reductase, barrel domain VAB027_1934 PF00521 DNA gyrase/topoisomerase IV, subunit A VAB027_1934 PF03989 DNA gyrase C-terminal domain, beta-propeller VAB027_1937 PF07690 Major Facilitator Superfamily VAB027_1939 PF00925 GTP cyclohydrolase II VAB027_194 PF02281 Transposase Tn5 dimerisation domain VAB027_194 PF01609 Transposase DDE domain VAB027_194 PF14706 Transposase DNA-binding VAB027_1945 PF05951 Bacterial protein of unknown function (DUF882) VAB027_1947 PF00753 Metallo-beta-lactamase superfamily VAB027_1949 PF03480 Bacterial extracellular solute-binding protein, family 7 VAB027_195 PF11852 Domain of unknown function (DUF3372) VAB027_195 PF18494 Pullulanase Ins domain VAB027_195 PF17967 Pullulanase N2 domain VAB027_195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAB027_195 PF03714 Bacterial pullanase-associated domain VAB027_1951 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAB027_1952 PF07730 Histidine kinase VAB027_1952 PF17200 Single Cache domain 2 VAB027_1953 PF00196 Bacterial regulatory proteins, luxR family VAB027_1953 PF00072 Response regulator receiver domain VAB027_1954 PF01047 MarR family VAB027_1955 PF02028 BCCT, betaine/carnitine/choline family transporter VAB027_1956 PF01522 Polysaccharide deacetylase VAB027_1957 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAB027_1958 PF02378 Phosphotransferase system, EIIC VAB027_1959 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VAB027_1960 PF11975 Family 4 glycosyl hydrolase C-terminal domain VAB027_1960 PF02056 Family 4 glycosyl hydrolase VAB027_1961 PF04794 YdjC-like protein VAB027_1962 PF00356 Bacterial regulatory proteins, lacI family VAB027_1963 PF13506 Glycosyl transferase family 21 VAB027_1964 PF04349 Periplasmic glucan biosynthesis protein, MdoG VAB027_1965 PF17200 Single Cache domain 2 VAB027_1965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1965 PF00672 HAMP domain VAB027_1967 PF01797 Transposase IS200 like VAB027_1970 PF00155 Aminotransferase class I and II VAB027_1971 PF01966 HD domain VAB027_1971 PF00672 HAMP domain VAB027_1972 PF08543 Phosphomethylpyrimidine kinase VAB027_1973 PF01336 OB-fold nucleic acid binding domain VAB027_1973 PF00152 tRNA synthetases class II (D, K and N) VAB027_1974 PF00672 HAMP domain VAB027_1974 PF12729 Four helix bundle sensory module for signal transduction VAB027_1974 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1975 PF01242 6-pyruvoyl tetrahydropterin synthase VAB027_1976 PF03315 Serine dehydratase beta chain VAB027_1976 PF03313 Serine dehydratase alpha chain VAB027_1977 PF03222 Tryptophan/tyrosine permease family VAB027_1978 PF00293 NUDIX domain VAB027_1979 PF00425 chorismate binding enzyme VAB027_1979 PF04715 Anthranilate synthase component I, N terminal region VAB027_198 PF10415 Fumarase C C-terminus VAB027_198 PF00206 Lyase VAB027_1982 PF04317 YcjX-like family, DUF463 VAB027_1983 PF05128 Domain of unknown function (DUF697) VAB027_1984 PF00158 Sigma-54 interaction domain VAB027_1984 PF18024 Helix-turn-helix domain VAB027_1985 PF13302 Acetyltransferase (GNAT) domain VAB027_1987 PF00892 EamA-like transporter family VAB027_1988 PF00842 Alanine racemase, C-terminal domain VAB027_1988 PF01168 Alanine racemase, N-terminal domain VAB027_1989 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_1989 PF00672 HAMP domain VAB027_199 PF00990 Diguanylate cyclase, GGDEF domain VAB027_199 PF17158 Membrane-associated sensor, integral membrane domain VAB027_1990 PF00939 Sodium:sulfate symporter transmembrane region VAB027_1991 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_1991 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1992 PF02954 Bacterial regulatory protein, Fis family VAB027_1992 PF00072 Response regulator receiver domain VAB027_1992 PF00158 Sigma-54 interaction domain VAB027_1993 PF04393 Protein of unknown function (DUF535) VAB027_1994 PF06629 MltA-interacting protein MipA VAB027_1995 PF00512 His Kinase A (phospho-acceptor) domain VAB027_1995 PF00672 HAMP domain VAB027_1995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_1996 PF00486 Transcriptional regulatory protein, C terminal VAB027_1996 PF00072 Response regulator receiver domain VAB027_2 PF00712 DNA polymerase III beta subunit, N-terminal domain VAB027_2 PF02768 DNA polymerase III beta subunit, C-terminal domain VAB027_2 PF02767 DNA polymerase III beta subunit, central domain VAB027_20 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAB027_20 PF00205 Thiamine pyrophosphate enzyme, central domain VAB027_20 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAB027_200 PF04186 FxsA cytoplasmic membrane protein VAB027_2000 PF13407 Periplasmic binding protein domain VAB027_2001 PF00005 ABC transporter VAB027_2002 PF02653 Branched-chain amino acid transport system / permease component VAB027_2005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_2005 PF00529 HlyD membrane-fusion protein of T1SS VAB027_2009 PF01970 Tripartite tricarboxylate transporter TctA family VAB027_201 PF00588 SpoU rRNA Methylase family VAB027_2012 PF00392 Bacterial regulatory proteins, gntR family VAB027_2012 PF07729 FCD domain VAB027_2015 PF00285 Citrate synthase, C-terminal domain VAB027_2016 PF00330 Aconitase family (aconitate hydratase) VAB027_2016 PF00694 Aconitase C-terminal domain VAB027_2017 PF04303 PrpF protein VAB027_2018 PF00501 AMP-binding enzyme VAB027_2018 PF13193 AMP-binding enzyme C-terminal domain VAB027_2018 PF16177 Acetyl-coenzyme A synthetase N-terminus VAB027_202 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAB027_202 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAB027_2021 PF01546 Peptidase family M20/M25/M40 VAB027_2021 PF07687 Peptidase dimerisation domain VAB027_2022 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_2023 PF04209 homogentisate 1,2-dioxygenase VAB027_2025 PF00072 Response regulator receiver domain VAB027_2026 PF14497 Glutathione S-transferase, C-terminal domain VAB027_2026 PF02798 Glutathione S-transferase, N-terminal domain VAB027_2029 PF00462 Glutaredoxin VAB027_2029 PF08534 Redoxin VAB027_203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_203 PF00512 His Kinase A (phospho-acceptor) domain VAB027_203 PF16527 Two-component sensor protein CpxA, periplasmic domain VAB027_203 PF00672 HAMP domain VAB027_2030 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2031 PF10672 S-adenosylmethionine-dependent methyltransferase VAB027_2031 PF17785 PUA-like domain VAB027_2032 PF00708 Acylphosphatase VAB027_2033 PF04358 DsrC like protein VAB027_2034 PF01027 Inhibitor of apoptosis-promoting Bax1 VAB027_2035 PF00005 ABC transporter VAB027_2036 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2037 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2038 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_2039 PF14824 Sirohaem biosynthesis protein central VAB027_2039 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAB027_2039 PF10414 Sirohaem synthase dimerisation region VAB027_204 PF00486 Transcriptional regulatory protein, C terminal VAB027_204 PF00072 Response regulator receiver domain VAB027_2041 PF04055 Radical SAM superfamily VAB027_2043 PF06508 Queuosine biosynthesis protein QueC VAB027_2046 PF03707 Bacterial signalling protein N terminal repeat VAB027_2046 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2046 PF00563 EAL domain VAB027_2048 PF17158 Membrane-associated sensor, integral membrane domain VAB027_2048 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2049 PF00012 Hsp70 protein VAB027_2050 PF00012 Hsp70 protein VAB027_2059 PF11898 Domain of unknown function (DUF3418) VAB027_2059 PF00270 DEAD/DEAH box helicase VAB027_2059 PF04408 Helicase associated domain (HA2) VAB027_2059 PF00271 Helicase conserved C-terminal domain VAB027_2059 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VAB027_206 PF16916 Dimerisation domain of Zinc Transporter VAB027_206 PF01545 Cation efflux family VAB027_2063 PF03099 Biotin/lipoate A/B protein ligase family VAB027_2063 PF10437 Bacterial lipoate protein ligase C-terminus VAB027_2064 PF01979 Amidohydrolase family VAB027_2065 PF03466 LysR substrate binding domain VAB027_2065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2066 PF07690 Major Facilitator Superfamily VAB027_2067 PF00875 DNA photolyase VAB027_2067 PF03441 FAD binding domain of DNA photolyase VAB027_2068 PF00893 Small Multidrug Resistance protein VAB027_2069 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2069 PF00672 HAMP domain VAB027_207 PF00365 Phosphofructokinase VAB027_2072 PF07194 P2 response regulator binding domain VAB027_2072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2072 PF01627 Hpt domain VAB027_2072 PF02895 Signal transducing histidine kinase, homodimeric domain VAB027_2072 PF01584 CheW-like domain VAB027_2073 PF01584 CheW-like domain VAB027_2073 PF00072 Response regulator receiver domain VAB027_2073 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2073 PF01627 Hpt domain VAB027_2074 PF01739 CheR methyltransferase, SAM binding domain VAB027_2074 PF03705 CheR methyltransferase, all-alpha domain VAB027_2076 PF01339 CheB methylesterase VAB027_2076 PF00072 Response regulator receiver domain VAB027_2077 PF01584 CheW-like domain VAB027_2078 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2078 PF00672 HAMP domain VAB027_2078 PF17202 Single cache domain 3 VAB027_2079 PF00672 HAMP domain VAB027_2079 PF12729 Four helix bundle sensory module for signal transduction VAB027_2079 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2080 PF13426 PAS domain VAB027_2080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2080 PF08447 PAS fold VAB027_2081 PF00270 DEAD/DEAH box helicase VAB027_2081 PF00271 Helicase conserved C-terminal domain VAB027_2083 PF02321 Outer membrane efflux protein VAB027_2084 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_2084 PF00529 HlyD membrane-fusion protein of T1SS VAB027_2085 PF07690 Major Facilitator Superfamily VAB027_2086 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2086 PF00672 HAMP domain VAB027_2086 PF02743 Cache domain VAB027_2087 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VAB027_2088 PF05638 Type VI secretion system effector, Hcp VAB027_2089 PF04717 Type VI secretion system, phage-baseplate injector VAB027_2089 PF16671 Actin cross-linking domain VAB027_2093 PF01810 LysE type translocator VAB027_2094 PF01235 Sodium:alanine symporter family VAB027_2097 PF13416 Bacterial extracellular solute-binding protein VAB027_2098 PF13416 Bacterial extracellular solute-binding protein VAB027_2099 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_21 PF13335 Magnesium chelatase, subunit ChlI C-terminal VAB027_21 PF01078 Magnesium chelatase, subunit ChlI VAB027_210 PF06005 Cell division protein ZapB VAB027_2100 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2101 PF00005 ABC transporter VAB027_2101 PF08402 TOBE domain VAB027_2105 PF01171 PP-loop family VAB027_2106 PF00582 Universal stress protein family VAB027_2107 PF00027 Cyclic nucleotide-binding domain VAB027_2107 PF13545 Crp-like helix-turn-helix domain VAB027_211 PF02219 Methylenetetrahydrofolate reductase VAB027_2110 PF00403 Heavy-metal-associated domain VAB027_2112 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAB027_2112 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VAB027_2115 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAB027_2118 PF09308 LuxQ, periplasmic VAB027_2118 PF00072 Response regulator receiver domain VAB027_2118 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2118 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2119 PF00664 ABC transporter transmembrane region VAB027_2119 PF00005 ABC transporter VAB027_2119 PF03412 Peptidase C39 family VAB027_212 PF00696 Amino acid kinase family VAB027_212 PF00742 Homoserine dehydrogenase VAB027_212 PF03447 Homoserine dehydrogenase, NAD binding domain VAB027_2121 PF00005 ABC transporter VAB027_2121 PF03412 Peptidase C39 family VAB027_2121 PF00664 ABC transporter transmembrane region VAB027_2123 PF02794 RTX toxin acyltransferase family VAB027_2124 PF11713 Peptidase C80 family VAB027_2124 PF11647 Membrane Localization Domain VAB027_2124 PF12146 Serine aminopeptidase, S33 VAB027_2124 PF16671 Actin cross-linking domain VAB027_2124 PF07634 RtxA repeat VAB027_2127 PF06303 MatP N-terminal domain VAB027_2127 PF17414 MatP C-terminal ribbon-helix-helix domain VAB027_2128 PF05362 Lon protease (S16) C-terminal proteolytic domain VAB027_2128 PF13654 AAA domain VAB027_2129 PF07977 FabA-like domain VAB027_213 PF01053 Cys/Met metabolism PLP-dependent enzyme VAB027_2130 PF04957 Ribosome modulation factor VAB027_2137 PF07126 Cell-division protein ZapC VAB027_2138 PF01180 Dihydroorotate dehydrogenase VAB027_2139 PF05088 Bacterial NAD-glutamate dehydrogenase VAB027_214 PF01340 Met Apo-repressor, MetJ VAB027_2141 PF01433 Peptidase family M1 domain VAB027_2141 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VAB027_2141 PF11940 Domain of unknown function (DUF3458) Ig-like fold VAB027_2143 PF17804 Tail specific protease N-terminal domain VAB027_2143 PF11818 C-terminal domain of tail specific protease (DUF3340) VAB027_2143 PF03572 Peptidase family S41 VAB027_2143 PF00595 PDZ domain VAB027_2144 PF17516 ProQ C-terminal domain VAB027_2144 PF04352 ProQ/FINO family VAB027_2145 PF13185 GAF domain VAB027_2146 PF00005 ABC transporter VAB027_2146 PF00664 ABC transporter transmembrane region VAB027_2147 PF04403 Paraquat-inducible protein A VAB027_2148 PF02470 MlaD protein VAB027_2149 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VAB027_2149 PF01189 16S rRNA methyltransferase RsmB/F VAB027_2149 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VAB027_215 PF03949 Malic enzyme, NAD binding domain VAB027_215 PF00390 Malic enzyme, N-terminal domain VAB027_2150 PF13509 S1 domain VAB027_2150 PF17783 CvfB-like winged helix domain VAB027_2153 PF00793 DAHP synthetase I family VAB027_2154 PF04461 Protein of unknown function (DUF520) VAB027_2155 PF02146 Sir2 family VAB027_2158 PF13247 4Fe-4S dicluster domain VAB027_2159 PF01568 Molydopterin dinucleotide binding domain VAB027_2159 PF00384 Molybdopterin oxidoreductase VAB027_2159 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAB027_216 PF01197 Ribosomal protein L31 VAB027_2161 PF02613 Nitrate reductase delta subunit VAB027_2165 PF02634 FdhD/NarQ family VAB027_2166 PF12848 ABC transporter VAB027_2166 PF00005 ABC transporter VAB027_2167 PF00989 PAS fold VAB027_2167 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2168 PF00158 Sigma-54 interaction domain VAB027_2168 PF00072 Response regulator receiver domain VAB027_2168 PF02954 Bacterial regulatory protein, Fis family VAB027_2169 PF12849 PBP superfamily domain VAB027_217 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VAB027_217 PF18074 Primosomal protein N C-terminal domain VAB027_217 PF17764 3′ DNA-binding domain (3′BD) VAB027_217 PF00271 Helicase conserved C-terminal domain VAB027_217 PF00270 DEAD/DEAH box helicase VAB027_2170 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2171 PF00005 ABC transporter VAB027_2171 PF08402 TOBE domain VAB027_2172 PF12804 MobA-like NTP transferase domain VAB027_2173 PF03453 MoeA N-terminal region (domain I and II) VAB027_2173 PF00994 Probable molybdopterin binding domain VAB027_2173 PF03454 MoeA C-terminal region (domain IV) VAB027_2175 PF00480 ROK family VAB027_2178 PF00672 HAMP domain VAB027_2178 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2178 PF12729 Four helix bundle sensory module for signal transduction VAB027_2179 PF00877 NlpC/P60 family VAB027_218 PF00356 Bacterial regulatory proteins, lacI family VAB027_2183 PF01554 MatE VAB027_2185 PF14743 DNA ligase OB-like domain VAB027_2185 PF01068 ATP dependent DNA ligase domain VAB027_2187 PF03544 Gram-negative bacterial TonB protein C-terminal VAB027_2188 PF02472 Biopolymer transport protein ExbD/TolR VAB027_2189 PF01618 MotA/TolQ/ExbB proton channel family VAB027_219 PF05036 Sporulation related domain VAB027_2190 PF01618 MotA/TolQ/ExbB proton channel family VAB027_2192 PF13416 Bacterial extracellular solute-binding protein VAB027_2193 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2194 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2195 PF17912 MalK OB fold domain VAB027_2195 PF00005 ABC transporter VAB027_2196 PF00455 DeoR C terminal sensor domain VAB027_2196 PF08220 DeoR-like helix-turn-helix domain VAB027_2197 PF03009 Glycerophosphoryl diester phosphodiesterase family VAB027_2198 PF04074 YhcH/YjgK/YiaL VAB027_2199 PF01042 Endoribonuclease L-PSP VAB027_22 PF01553 Acyltransferase VAB027_220 PF00227 Proteasome subunit VAB027_2200 PF00356 Bacterial regulatory proteins, lacI family VAB027_2201 PF00232 Glycosyl hydrolase family 1 VAB027_2202 PF00141 Peroxidase VAB027_2203 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2203 PF03466 LysR substrate binding domain VAB027_2207 PF12704 MacB-like periplasmic core domain VAB027_2207 PF02687 FtsX-like permease family VAB027_2207 PF00005 ABC transporter VAB027_2208 PF12704 MacB-like periplasmic core domain VAB027_2208 PF02687 FtsX-like permease family VAB027_2208 PF00005 ABC transporter VAB027_2209 PF02687 FtsX-like permease family VAB027_2209 PF12704 MacB-like periplasmic core domain VAB027_2209 PF00005 ABC transporter VAB027_221 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_221 PF10431 C-terminal, D2-small domain, of ClpB protein VAB027_221 PF07724 AAA domain (Cdc48 subfamily) VAB027_2210 PF02322 Cytochrome bd terminal oxidase subunit II VAB027_2211 PF01654 Cytochrome bd terminal oxidase subunit I VAB027_2213 PF10415 Fumarase C C-terminus VAB027_2213 PF00206 Lyase VAB027_2219 PF13193 AMP-binding enzyme C-terminal domain VAB027_2219 PF00501 AMP-binding enzyme VAB027_222 PF01040 UbiA prenyltransferase family VAB027_2220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2220 PF03466 LysR substrate binding domain VAB027_2221 PF00361 Proton-conducting membrane transporter VAB027_2221 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAB027_2222 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) VAB027_2223 PF00080 Copper/zinc superoxide dismutase (SODC) VAB027_2225 PF06628 Catalase-related immune-responsive VAB027_2225 PF00199 Catalase VAB027_2229 PF01965 DJ-1/PfpI family VAB027_223 PF03737 Aldolase/RraA VAB027_2230 PF16123 Hydroxyacylglutathione hydrolase C-terminus VAB027_2230 PF00753 Metallo-beta-lactamase superfamily VAB027_2232 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_2233 PF03466 LysR substrate binding domain VAB027_2233 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2234 PF03306 Alpha-acetolactate decarboxylase VAB027_2235 PF00205 Thiamine pyrophosphate enzyme, central domain VAB027_2235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAB027_2235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAB027_2237 PF17154 Gammaproteobacterial periplasmic sensor domain VAB027_2237 PF00563 EAL domain VAB027_2237 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2237 PF00672 HAMP domain VAB027_2238 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2239 PF01263 Aldose 1-epimerase VAB027_2240 PF08544 GHMP kinases C terminal VAB027_2240 PF00288 GHMP kinases N terminal domain VAB027_2240 PF10509 Galactokinase galactose-binding signature VAB027_2241 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VAB027_2241 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VAB027_2242 PF07690 Major Facilitator Superfamily VAB027_2246 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2246 PF00072 Response regulator receiver domain VAB027_2249 PF00072 Response regulator receiver domain VAB027_2249 PF01584 CheW-like domain VAB027_225 PF00121 Triosephosphate isomerase VAB027_2251 PF00072 Response regulator receiver domain VAB027_2252 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VAB027_2252 PF17203 Single cache domain 3 VAB027_2252 PF00989 PAS fold VAB027_2252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_2259 PF04204 Homoserine O-succinyltransferase VAB027_2262 PF05971 RNA methyltransferase VAB027_2263 PF01863 Protein of unknown function DUF45 VAB027_2265 PF03466 LysR substrate binding domain VAB027_2265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2269 PF02321 Outer membrane efflux protein VAB027_2270 PF00691 OmpA family VAB027_2270 PF05736 OprF membrane domain VAB027_2272 PF16653 Saccharopine dehydrogenase C-terminal domain VAB027_2272 PF03435 Saccharopine dehydrogenase NADP binding domain VAB027_2273 PF00202 Aminotransferase class-III VAB027_2274 PF06965 Na+/H+ antiporter 1 VAB027_2277 PF00005 ABC transporter VAB027_2278 PF01554 MatE VAB027_2279 PF11066 Protein of unknown function (DUF2867) VAB027_2279 PF13460 NAD(P)H-binding VAB027_2281 PF07690 Major Facilitator Superfamily VAB027_2282 PF00849 RNA pseudouridylate synthase VAB027_2282 PF01479 S4 domain VAB027_2283 PF00271 Helicase conserved C-terminal domain VAB027_2283 PF04851 Type III restriction enzyme, res subunit VAB027_2285 PF00486 Transcriptional regulatory protein, C terminal VAB027_2285 PF00072 Response regulator receiver domain VAB027_2286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2286 PF00989 PAS fold VAB027_2286 PF11808 Phosphate regulon sensor protein PhoR VAB027_2286 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2287 PF01386 Ribosomal L25p family VAB027_2288 PF00360 Phytochrome region VAB027_2288 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2288 PF00563 EAL domain VAB027_2288 PF01590 GAF domain VAB027_229 PF08220 DeoR-like helix-turn-helix domain VAB027_229 PF00455 DeoR C terminal sensor domain VAB027_2290 PF12729 Four helix bundle sensory module for signal transduction VAB027_2290 PF00672 HAMP domain VAB027_2290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2292 PF09101 Exotoxin A binding VAB027_2292 PF09009 Exotoxin A catalytic VAB027_2292 PF09102 Exotoxin A, targeting VAB027_2295 PF12793 Sugar transport-related sRNA regulator N-term VAB027_2295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAB027_2297 PF04151 Bacterial pre-peptidase C-terminal domain VAB027_2297 PF01752 Collagenase VAB027_2297 PF08453 Peptidase family M9 N-terminal VAB027_2299 PF00563 EAL domain VAB027_2299 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2299 PF03707 Bacterial signalling protein N terminal repeat VAB027_23 PF01323 DSBA-like thioredoxin domain VAB027_230 PF00166 Chaperonin 10 Kd subunit VAB027_2300 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2300 PF09308 LuxQ, periplasmic VAB027_2300 PF00072 Response regulator receiver domain VAB027_2300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2301 PF01769 Divalent cation transporter VAB027_2301 PF03448 MgtE intracellular N domain VAB027_2301 PF00571 CBS domain VAB027_2304 PF03222 Tryptophan/tyrosine permease family VAB027_2305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_2306 PF00005 ABC transporter VAB027_2309 PF06945 Protein of unknown function (DUF1289) VAB027_231 PF00118 TCP-1/cpn60 chaperonin family VAB027_2311 PF13416 Bacterial extracellular solute-binding protein VAB027_2312 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2313 PF00005 ABC transporter VAB027_2314 PF01066 CDP-alcohol phosphatidyltransferase VAB027_2315 PF00849 RNA pseudouridylate synthase VAB027_2316 PF00209 Sodium:neurotransmitter symporter family VAB027_2317 PF13091 PLD-like domain VAB027_2317 PF13396 Phospholipase_D-nuclease N-terminal VAB027_2318 PF01053 Cys/Met metabolism PLP-dependent enzyme VAB027_2319 PF03352 Methyladenine glycosylase VAB027_2320 PF00873 AcrB/AcrD/AcrF family VAB027_2321 PF13533 Biotin-lipoyl like VAB027_2322 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_2322 PF00529 HlyD membrane-fusion protein of T1SS VAB027_2325 PF04012 PspA/IM30 family VAB027_2326 PF00158 Sigma-54 interaction domain VAB027_2326 PF02954 Bacterial regulatory protein, Fis family VAB027_2329 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_233 PF04055 Radical SAM superfamily VAB027_2330 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2330 PF12911 N-terminal TM domain of oligopeptide transport permease C VAB027_2331 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_2331 PF00005 ABC transporter VAB027_2332 PF00005 ABC transporter VAB027_2335 PF01368 DHH family VAB027_2335 PF02833 DHHA2 domain VAB027_2338 PF00384 Molybdopterin oxidoreductase VAB027_2338 PF18364 Molybdopterin oxidoreductase N-terminal domain VAB027_2338 PF01568 Molydopterin dinucleotide binding domain VAB027_2339 PF03264 NapC/NirT cytochrome c family, N-terminal region VAB027_234 PF09285 Elongation factor P, C-terminal VAB027_234 PF08207 Elongation factor P (EF-P) KOW-like domain VAB027_234 PF01132 Elongation factor P (EF-P) OB domain VAB027_2340 PF06796 Periplasmic nitrate reductase protein NapE VAB027_2341 PF01226 Formate/nitrite transporter VAB027_2343 PF01370 NAD dependent epimerase/dehydratase family VAB027_2344 PF02698 DUF218 domain VAB027_2346 PF04279 Intracellular septation protein A VAB027_2347 PF03061 Thioesterase superfamily VAB027_2348 PF03795 YCII-related domain VAB027_235 PF02313 Fumarate reductase subunit D VAB027_2350 PF01717 Cobalamin-independent synthase, Catalytic domain VAB027_2350 PF08267 Cobalamin-independent synthase, N-terminal domain VAB027_2351 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2351 PF03466 LysR substrate binding domain VAB027_2354 PF05193 Peptidase M16 inactive domain VAB027_2354 PF00675 Insulinase (Peptidase family M16) VAB027_2355 PF00563 EAL domain VAB027_2355 PF08447 PAS fold VAB027_2355 PF08448 PAS fold VAB027_2355 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2356 PF08497 Radical SAM N-terminal VAB027_2356 PF11842 Domain of unknown function (DUF3362) VAB027_2356 PF04055 Radical SAM superfamily VAB027_2357 PF01810 LysE type translocator VAB027_2358 PF01037 Lrp/AsnC ligand binding domain VAB027_2359 PF04310 MukB N-terminal VAB027_2359 PF16330 MukB hinge domain VAB027_236 PF02300 Fumarate reductase subunit C VAB027_2360 PF04288 MukE-like family VAB027_2361 PF17193 MukF C-terminal domain VAB027_2361 PF03882 MukF winged-helix domain VAB027_2361 PF17192 MukF middle domain VAB027_2363 PF02698 DUF218 domain VAB027_2364 PF00486 Transcriptional regulatory protein, C terminal VAB027_2364 PF00072 Response regulator receiver domain VAB027_2365 PF02613 Nitrate reductase delta subunit VAB027_2366 PF00356 Bacterial regulatory proteins, lacI family VAB027_2367 PF04993 TfoX N-terminal domain VAB027_2367 PF04994 TfoX C-terminal domain VAB027_237 PF13085 2Fe-2S iron-sulfur cluster binding domain VAB027_237 PF13183 4Fe-4S dicluster domain VAB027_2371 PF08323 Starch synthase catalytic domain VAB027_2371 PF00534 Glycosyl transferases group 1 VAB027_2372 PF00483 Nucleotidyl transferase VAB027_2373 PF01131 DNA topoisomerase VAB027_2373 PF01396 Topoisomerase DNA binding C4 zinc finger VAB027_2373 PF01751 Toprim domain VAB027_2373 PF08272 Topoisomerase I zinc-ribbon-like VAB027_2374 PF10692 Protein of unknown function (DUF2498) VAB027_2375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAB027_2376 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VAB027_2377 PF04376 Arginine-tRNA-protein transferase, N terminus VAB027_2377 PF04377 Arginine-tRNA-protein transferase, C terminus VAB027_2378 PF01176 Translation initiation factor 1A / IF-1 VAB027_2379 PF07055 Enoyl reductase FAD binding domain VAB027_2379 PF12241 Trans-2-enoyl-CoA reductase catalytic region VAB027_2379 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VAB027_238 PF02910 Fumarate reductase flavoprotein C-term VAB027_238 PF00890 FAD binding domain VAB027_2380 PF09317 Domain of unknown function (DUF1974) VAB027_2380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAB027_2380 PF02770 Acyl-CoA dehydrogenase, middle domain VAB027_2380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAB027_2381 PF00440 Bacterial regulatory proteins, tetR family VAB027_2381 PF16295 Tetracyclin repressor-like, C-terminal domain VAB027_2383 PF00171 Aldehyde dehydrogenase family VAB027_2384 PF07383 Protein of unknown function (DUF1496) VAB027_2385 PF00440 Bacterial regulatory proteins, tetR family VAB027_2385 PF08362 YcdC-like protein, C-terminal region VAB027_2386 PF04403 Paraquat-inducible protein A VAB027_2387 PF02470 MlaD protein VAB027_2389 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_239 PF00152 tRNA synthetases class II (D, K and N) VAB027_2390 PF00873 AcrB/AcrD/AcrF family VAB027_2392 PF13356 Arm DNA-binding domain VAB027_2392 PF00589 Phage integrase family VAB027_2394 PF03545 Yersinia virulence determinant (YopE) VAB027_2394 PF09020 YopE, N terminal VAB027_24 PF01636 Phosphotransferase enzyme family VAB027_240 PF00581 Rhodanese-like domain VAB027_2403 PF18269 T3SS EscN ATPase C-terminal domain VAB027_2403 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAB027_2403 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAB027_2407 PF00813 FliP family VAB027_2409 PF00486 Transcriptional regulatory protein, C terminal VAB027_241 PF02556 Preprotein translocase subunit SecB VAB027_2414 PF00691 OmpA family VAB027_2415 PF01312 FlhB HrpN YscU SpaS Family VAB027_2416 PF00771 FHIPEP family VAB027_242 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VAB027_242 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VAB027_243 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_243 PF06426 Serine acetyltransferase, N-terminal VAB027_2437 PF13402 Peptidase M60, enhancin and enhancin-like VAB027_2437 PF13322 Domain of unknown function (DUF4092) VAB027_2437 PF17291 N-terminal domain of M60-like peptidases VAB027_2438 PF03347 Vibrio thermostable direct hemolysin VAB027_2439 PF00561 alpha/beta hydrolase fold VAB027_2444 PF02368 Bacterial Ig-like domain (group 2) VAB027_2444 PF11999 Protein of unknown function (DUF3494) VAB027_2446 PF07646 Kelch motif VAB027_2447 PF01344 Kelch motif VAB027_2448 PF01380 SIS domain VAB027_2448 PF01418 Helix-turn-helix domain, rpiR family VAB027_2449 PF00701 Dihydrodipicolinate synthetase family VAB027_245 PF00311 Phosphoenolpyruvate carboxylase VAB027_2450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAB027_2451 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAB027_2452 PF03480 Bacterial extracellular solute-binding protein, family 7 VAB027_2453 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VAB027_2454 PF00480 ROK family VAB027_2455 PF01979 Amidohydrolase family VAB027_2456 PF13088 BNR repeat-like domain VAB027_2456 PF09264 Vibrio cholerae sialidase, lectin insertion VAB027_246 PF01546 Peptidase family M20/M25/M40 VAB027_246 PF07687 Peptidase dimerisation domain VAB027_2462 PF07728 AAA domain (dynein-related subfamily) VAB027_2462 PF12102 Domain of unknown function (DUF3578) VAB027_2465 PF00563 EAL domain VAB027_2465 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2465 PF13426 PAS domain VAB027_2467 PF03441 FAD binding domain of DNA photolyase VAB027_2467 PF00875 DNA photolyase VAB027_2469 PF09905 DNA-binding protein VF530 VAB027_247 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAB027_247 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAB027_2470 PF01590 GAF domain VAB027_2470 PF02954 Bacterial regulatory protein, Fis family VAB027_2470 PF00158 Sigma-54 interaction domain VAB027_2471 PF00171 Aldehyde dehydrogenase family VAB027_2472 PF06610 L-alanine exporter VAB027_2473 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2473 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2473 PF09308 LuxQ, periplasmic VAB027_2473 PF00072 Response regulator receiver domain VAB027_2475 PF02445 Quinolinate synthetase A protein VAB027_2477 PF00691 OmpA family VAB027_2478 PF04052 TolB amino-terminal domain VAB027_2478 PF07676 WD40-like Beta Propeller Repeat VAB027_248 PF00696 Amino acid kinase family VAB027_2480 PF02472 Biopolymer transport protein ExbD/TolR VAB027_2481 PF01618 MotA/TolQ/ExbB proton channel family VAB027_2482 PF03061 Thioesterase superfamily VAB027_2483 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) VAB027_2484 PF08173 Membrane bound YbgT-like protein VAB027_2485 PF02322 Cytochrome bd terminal oxidase subunit II VAB027_2486 PF01654 Cytochrome bd terminal oxidase subunit I VAB027_2487 PF05491 RuvB C-terminal winged helix domain VAB027_2487 PF05496 Holliday junction DNA helicase RuvB P-loop domain VAB027_2487 PF17864 RuvB AAA lid domain VAB027_2489 PF07499 RuvA, C-terminal domain VAB027_2489 PF01330 RuvA N terminal domain VAB027_249 PF00764 Arginosuccinate synthase VAB027_2490 PF02075 Crossover junction endodeoxyribonuclease RuvC VAB027_2491 PF09190 DALR domain VAB027_2491 PF01406 tRNA synthetases class I (C) catalytic domain VAB027_2492 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAB027_2493 PF00149 Calcineurin-like phosphoesterase VAB027_2494 PF08668 HDOD domain VAB027_2494 PF00563 EAL domain VAB027_2495 PF02810 SEC-C motif VAB027_2496 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VAB027_2497 PF13609 Gram-negative porin VAB027_2498 PF06733 DEAD_2 VAB027_2498 PF13307 Helicase C-terminal domain VAB027_2499 PF01925 Sulfite exporter TauE/SafE VAB027_25 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VAB027_25 PF13746 4Fe-4S dicluster domain VAB027_25 PF12801 4Fe-4S binding domain VAB027_250 PF00206 Lyase VAB027_250 PF14698 Argininosuccinate lyase C-terminal VAB027_2500 PF07445 Primosomal replication protein priC VAB027_2501 PF10689 Protein of unknown function (DUF2496) VAB027_2502 PF00672 HAMP domain VAB027_2502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2503 PF03372 Endonuclease/Exonuclease/phosphatase family VAB027_2504 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2505 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_2506 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_2507 PF00005 ABC transporter VAB027_2511 PF01228 Glycine radical VAB027_2511 PF02901 Pyruvate formate lyase-like VAB027_2513 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2513 PF00672 HAMP domain VAB027_2513 PF12729 Four helix bundle sensory module for signal transduction VAB027_2514 PF04055 Radical SAM superfamily VAB027_2516 PF03887 YfbU domain VAB027_2517 PF06798 PrkA serine protein kinase C-terminal domain VAB027_2517 PF08298 PrkA AAA domain VAB027_2518 PF04285 Protein of unknown function (DUF444) VAB027_2519 PF04293 SpoVR like protein VAB027_252 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_252 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAB027_2520 PF02348 Cytidylyltransferase VAB027_2521 PF03966 Trm112p-like protein VAB027_2522 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VAB027_2523 PF00005 ABC transporter VAB027_2523 PF00664 ABC transporter transmembrane region VAB027_2524 PF00753 Metallo-beta-lactamase superfamily VAB027_2524 PF13567 Domain of unknown function (DUF4131) VAB027_2524 PF03772 Competence protein VAB027_2526 PF12704 MacB-like periplasmic core domain VAB027_2526 PF02687 FtsX-like permease family VAB027_2527 PF00005 ABC transporter VAB027_2528 PF02687 FtsX-like permease family VAB027_2528 PF12704 MacB-like periplasmic core domain VAB027_253 PF00462 Glutaredoxin VAB027_253 PF08534 Redoxin VAB027_2530 PF03461 TRCF domain VAB027_2530 PF17757 UvrB interaction domain VAB027_2530 PF00270 DEAD/DEAH box helicase VAB027_2530 PF02559 CarD-like/TRCF domain VAB027_2530 PF00271 Helicase conserved C-terminal domain VAB027_2532 PF16458 Beta-prism lectin VAB027_2532 PF12563 Hemolytic toxin N terminal VAB027_2532 PF07968 Leukocidin/Hemolysin toxin family VAB027_2534 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_2538 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VAB027_2538 PF13036 Peptidoglycan-synthase activator LpoB VAB027_254 PF03466 LysR substrate binding domain VAB027_254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2541 PF01230 HIT domain VAB027_2542 PF00672 HAMP domain VAB027_2542 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2545 PF00392 Bacterial regulatory proteins, gntR family VAB027_2545 PF07840 FadR C-terminal domain VAB027_2546 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VAB027_2547 PF02600 Disulfide bond formation protein DsbB VAB027_2548 PF01580 FtsK/SpoIIIE family VAB027_2548 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VAB027_2548 PF17854 FtsK alpha domain VAB027_2548 PF09397 Ftsk gamma domain VAB027_2549 PF01037 Lrp/AsnC ligand binding domain VAB027_255 PF00905 Penicillin binding protein transpeptidase domain VAB027_255 PF00912 Transglycosylase VAB027_255 PF17092 Penicillin-binding protein OB-like domain VAB027_2550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VAB027_2550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VAB027_2552 PF03466 LysR substrate binding domain VAB027_2552 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2554 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VAB027_2555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAB027_2556 PF18073 Rubredoxin metal binding domain VAB027_2557 PF06305 Lipopolysaccharide assembly protein A domain VAB027_2558 PF00216 Bacterial DNA-binding protein VAB027_2559 PF00575 S1 RNA binding domain VAB027_2560 PF02224 Cytidylate kinase VAB027_2562 PF13145 PPIC-type PPIASE domain VAB027_2563 PF00216 Bacterial DNA-binding protein VAB027_2564 PF05362 Lon protease (S16) C-terminal proteolytic domain VAB027_2564 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_2564 PF02190 ATP-dependent protease La (LON) substrate-binding domain VAB027_2565 PF10431 C-terminal, D2-small domain, of ClpB protein VAB027_2565 PF07724 AAA domain (Cdc48 subfamily) VAB027_2565 PF06689 ClpX C4-type zinc finger VAB027_2566 PF00574 Clp protease VAB027_2567 PF05697 Bacterial trigger factor protein (TF) VAB027_2567 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAB027_2567 PF05698 Bacterial trigger factor protein (TF) C-terminus VAB027_2568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2568 PF02743 Cache domain VAB027_2568 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2569 PF00072 Response regulator receiver domain VAB027_2569 PF00158 Sigma-54 interaction domain VAB027_2569 PF02954 Bacterial regulatory protein, Fis family VAB027_2570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAB027_2571 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAB027_2572 PF03480 Bacterial extracellular solute-binding protein, family 7 VAB027_2573 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VAB027_2576 PF00563 EAL domain VAB027_2576 PF13188 PAS domain VAB027_2576 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2576 PF03707 Bacterial signalling protein N terminal repeat VAB027_2585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VAB027_2585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VAB027_2586 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VAB027_2587 PF01494 FAD binding domain VAB027_2588 PF03466 LysR substrate binding domain VAB027_2588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2590 PF01568 Molydopterin dinucleotide binding domain VAB027_2590 PF18364 Molybdopterin oxidoreductase N-terminal domain VAB027_2590 PF00384 Molybdopterin oxidoreductase VAB027_2591 PF03264 NapC/NirT cytochrome c family, N-terminal region VAB027_2592 PF00704 Glycosyl hydrolases family 18 VAB027_2593 PF07670 Nucleoside recognition VAB027_2593 PF01773 Na+ dependent nucleoside transporter N-terminus VAB027_2593 PF07662 Na+ dependent nucleoside transporter C-terminus VAB027_2594 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2594 PF03466 LysR substrate binding domain VAB027_2595 PF13406 Transglycosylase SLT domain VAB027_2596 PF05166 YcgL domain VAB027_2597 PF05209 Septum formation inhibitor MinC, N-terminal domain VAB027_2597 PF03775 Septum formation inhibitor MinC, C-terminal domain VAB027_2598 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAB027_2599 PF03776 Septum formation topological specificity factor MinE VAB027_26 PF06288 Protein of unknown function (DUF1040) VAB027_260 PF00263 Bacterial type II and III secretion system protein VAB027_260 PF03958 Bacterial type II/III secretion system short domain VAB027_260 PF11741 AMIN domain VAB027_260 PF07660 Secretin and TonB N terminus short domain VAB027_2600 PF04170 NlpE N-terminal domain VAB027_2605 PF07690 Major Facilitator Superfamily VAB027_2606 PF03594 Benzoate membrane transport protein VAB027_2607 PF00501 AMP-binding enzyme VAB027_2607 PF13193 AMP-binding enzyme C-terminal domain VAB027_2608 PF13378 Enolase C-terminal domain-like VAB027_2609 PF00378 Enoyl-CoA hydratase/isomerase VAB027_261 PF01202 Shikimate kinase VAB027_2610 PF12697 Alpha/beta hydrolase family VAB027_2611 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAB027_2611 PF16582 Middle domain of thiamine pyrophosphate VAB027_2611 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAB027_2612 PF00425 chorismate binding enzyme VAB027_2613 PF00155 Aminotransferase class I and II VAB027_2616 PF01966 HD domain VAB027_2616 PF13286 Phosphohydrolase-associated domain VAB027_2619 PF01612 3'-5' exonuclease VAB027_2619 PF00570 HRDC domain VAB027_262 PF01761 3-dehydroquinate synthase VAB027_2620 PF00501 AMP-binding enzyme VAB027_2620 PF13193 AMP-binding enzyme C-terminal domain VAB027_2621 PF00561 alpha/beta hydrolase fold VAB027_2624 PF00814 Glycoprotease family VAB027_2625 PF04851 Type III restriction enzyme, res subunit VAB027_2625 PF13307 Helicase C-terminal domain VAB027_2627 PF00551 Formyl transferase VAB027_2627 PF01842 ACT domain VAB027_2628 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_2628 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAB027_2629 PF01343 Peptidase family S49 VAB027_2630 PF17763 Glutaminase/Asparaginase C-terminal domain VAB027_2630 PF00710 Asparaginase, N-terminal VAB027_2631 PF07023 Protein of unknown function (DUF1315) VAB027_2633 PF01641 SelR domain VAB027_2634 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_2634 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAB027_2635 PF01263 Aldose 1-epimerase VAB027_2637 PF13847 Methyltransferase domain VAB027_264 PF02086 D12 class N6 adenine-specific DNA methyltransferase VAB027_2640 PF00072 Response regulator receiver domain VAB027_2640 PF01584 CheW-like domain VAB027_2641 PF00480 ROK family VAB027_2642 PF02887 Pyruvate kinase, alpha/beta domain VAB027_2642 PF00224 Pyruvate kinase, barrel domain VAB027_2643 PF01734 Patatin-like phospholipase VAB027_2646 PF00209 Sodium:neurotransmitter symporter family VAB027_2649 PF01609 Transposase DDE domain VAB027_2649 PF13006 Insertion element 4 transposase N-terminal VAB027_265 PF00834 Ribulose-phosphate 3 epimerase family VAB027_2650 PF02378 Phosphotransferase system, EIIC VAB027_2650 PF00367 phosphotransferase system, EIIB VAB027_2651 PF01026 TatD related DNase VAB027_2652 PF09115 DNA polymerase III, delta subunit, C terminal VAB027_2653 PF02223 Thymidylate kinase VAB027_2654 PF02618 YceG-like family VAB027_2655 PF01063 Amino-transferase class IV VAB027_2656 PF00109 Beta-ketoacyl synthase, N-terminal domain VAB027_2656 PF02801 Beta-ketoacyl synthase, C-terminal domain VAB027_2657 PF00550 Phosphopantetheine attachment site VAB027_2659 PF00698 Acyl transferase domain VAB027_266 PF13419 Haloacid dehalogenase-like hydrolase VAB027_2660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAB027_2660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAB027_2661 PF02504 Fatty acid synthesis protein VAB027_2662 PF01783 Ribosomal L32p protein family VAB027_2663 PF02620 Large ribosomal RNA subunit accumulation protein YceD VAB027_2664 PF02545 Maf-like protein VAB027_2665 PF00849 RNA pseudouridylate synthase VAB027_2665 PF01479 S4 domain VAB027_2667 PF00575 S1 RNA binding domain VAB027_2667 PF12111 Polyribonucleotide phosphorylase C terminal VAB027_2667 PF10150 Ribonuclease E/G family VAB027_2668 PF01740 STAS domain VAB027_2668 PF00916 Sulfate permease family VAB027_267 PF00579 tRNA synthetases class I (W and Y) VAB027_2670 PF00171 Aldehyde dehydrogenase family VAB027_2670 PF00465 Iron-containing alcohol dehydrogenase VAB027_2671 PF01914 MarC family integral membrane protein VAB027_2672 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAB027_2672 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAB027_2673 PF03553 Na+/H+ antiporter family VAB027_2675 PF04245 37-kD nucleoid-associated bacterial protein VAB027_2676 PF07208 Protein of unknown function (DUF1414) VAB027_2677 PF00884 Sulfatase VAB027_2677 PF11893 Domain of unknown function (DUF3413) VAB027_2680 PF00850 Histone deacetylase domain VAB027_2681 PF01131 DNA topoisomerase VAB027_2681 PF01751 Toprim domain VAB027_2682 PF00462 Glutaredoxin VAB027_2683 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAB027_2683 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAB027_2686 PF04333 MlaA lipoprotein VAB027_2688 PF03918 Cytochrome C biogenesis protein VAB027_2689 PF08534 Redoxin VAB027_2690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VAB027_2690 PF01578 Cytochrome C assembly protein VAB027_2691 PF03100 CcmE VAB027_2692 PF04995 Heme exporter protein D (CcmD) VAB027_2693 PF01578 Cytochrome C assembly protein VAB027_2694 PF03379 CcmB protein VAB027_2695 PF00005 ABC transporter VAB027_2697 PF01584 CheW-like domain VAB027_2699 PF13614 AAA domain VAB027_27 PF07070 SpoOM protein VAB027_270 PF18693 TRAM domain VAB027_270 PF00919 Uncharacterized protein family UPF0004 VAB027_270 PF04055 Radical SAM superfamily VAB027_2700 PF00072 Response regulator receiver domain VAB027_2700 PF01339 CheB methylesterase VAB027_2701 PF02895 Signal transducing histidine kinase, homodimeric domain VAB027_2701 PF01584 CheW-like domain VAB027_2701 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2701 PF01627 Hpt domain VAB027_2701 PF07194 P2 response regulator binding domain VAB027_2702 PF04344 Chemotaxis phosphatase, CheZ VAB027_2703 PF00072 Response regulator receiver domain VAB027_2704 PF04542 Sigma-70 region 2 VAB027_2704 PF04539 Sigma-70 region 3 VAB027_2704 PF04545 Sigma-70, region 4 VAB027_2705 PF10609 NUBPL iron-transfer P-loop NTPase VAB027_2706 PF00448 SRP54-type protein, GTPase domain VAB027_2707 PF00771 FHIPEP family VAB027_2708 PF00300 Histidine phosphatase superfamily (branch 1) VAB027_271 PF00117 Glutamine amidotransferase class-I VAB027_2710 PF05193 Peptidase M16 inactive domain VAB027_2710 PF00675 Insulinase (Peptidase family M16) VAB027_2711 PF05746 DALR anticodon binding domain VAB027_2711 PF00750 tRNA synthetases class I (R) VAB027_2711 PF03485 Arginyl tRNA synthetase N terminal domain VAB027_2714 PF07670 Nucleoside recognition VAB027_2714 PF02421 Ferrous iron transport protein B VAB027_2714 PF07664 Ferrous iron transport protein B C terminus VAB027_2715 PF04023 FeoA domain VAB027_2716 PF02311 AraC-like ligand binding domain VAB027_2716 PF12833 Helix-turn-helix domain VAB027_2717 PF01297 Zinc-uptake complex component A periplasmic VAB027_2718 PF00005 ABC transporter VAB027_2719 PF00950 ABC 3 transport family VAB027_272 PF00202 Aminotransferase class-III VAB027_2720 PF02629 CoA binding domain VAB027_2720 PF00549 CoA-ligase VAB027_2721 PF00549 CoA-ligase VAB027_2721 PF08442 ATP-grasp domain VAB027_2722 PF02817 e3 binding domain VAB027_2722 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAB027_2722 PF00364 Biotin-requiring enzyme VAB027_2723 PF02779 Transketolase, pyrimidine binding domain VAB027_2723 PF00676 Dehydrogenase E1 component VAB027_2723 PF16870 2-oxoglutarate dehydrogenase C-terminal VAB027_2723 PF16078 2-oxoglutarate dehydrogenase N-terminus VAB027_2724 PF13085 2Fe-2S iron-sulfur cluster binding domain VAB027_2725 PF00890 FAD binding domain VAB027_2725 PF02910 Fumarate reductase flavoprotein C-term VAB027_2726 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VAB027_2727 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VAB027_2728 PF00285 Citrate synthase, C-terminal domain VAB027_2729 PF01784 NIF3 (NGG1p interacting factor 3) VAB027_273 PF04958 Arginine N-succinyltransferase beta subunit VAB027_2731 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAB027_2731 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAB027_2731 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAB027_2731 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAB027_2732 PF17206 SeqA protein N-terminal domain VAB027_2732 PF03925 SeqA protein C-terminal domain VAB027_2733 PF12697 Alpha/beta hydrolase family VAB027_2735 PF00258 Flavodoxin VAB027_2737 PF03788 LrgA family VAB027_2738 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_2738 PF03466 LysR substrate binding domain VAB027_274 PF00171 Aldehyde dehydrogenase family VAB027_2740 PF01475 Ferric uptake regulator family VAB027_2741 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAB027_2741 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAB027_2742 PF11890 Domain of unknown function (DUF3410) VAB027_2742 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAB027_2742 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAB027_2743 PF00109 Beta-ketoacyl synthase, N-terminal domain VAB027_2743 PF02801 Beta-ketoacyl synthase, C-terminal domain VAB027_2744 PF01266 FAD dependent oxidoreductase VAB027_2744 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2745 PF03358 NADPH-dependent FMN reductase VAB027_2746 PF08891 YfcL protein VAB027_2747 PF04315 Elongation factor P hydroxylase VAB027_2748 PF03458 UPF0126 domain VAB027_2749 PF01264 Chorismate synthase VAB027_2750 PF05175 Methyltransferase small domain VAB027_2751 PF01713 Smr domain VAB027_2752 PF01312 FlhB HrpN YscU SpaS Family VAB027_2753 PF01311 Bacterial export proteins, family 1 VAB027_2754 PF01313 Bacterial export proteins, family 3 VAB027_2755 PF00813 FliP family VAB027_2756 PF04347 Flagellar biosynthesis protein, FliO VAB027_2757 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAB027_2758 PF02154 Flagellar motor switch protein FliM VAB027_2758 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAB027_2759 PF03748 Flagellar basal body-associated protein FliL VAB027_276 PF01609 Transposase DDE domain VAB027_276 PF13006 Insertion element 4 transposase N-terminal VAB027_2762 PF18269 T3SS EscN ATPase C-terminal domain VAB027_2762 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAB027_2763 PF02108 Flagellar assembly protein FliH VAB027_2764 PF01706 FliG C-terminal domain VAB027_2764 PF14842 FliG N-terminal domain VAB027_2764 PF14841 FliG middle domain VAB027_2765 PF01514 Secretory protein of YscJ/FliF family VAB027_2765 PF08345 Flagellar M-ring protein C-terminal VAB027_2766 PF02049 Flagellar hook-basal body complex protein FliE VAB027_2767 PF00072 Response regulator receiver domain VAB027_2767 PF02954 Bacterial regulatory protein, Fis family VAB027_2767 PF00158 Sigma-54 interaction domain VAB027_2768 PF13493 Domain of unknown function (DUF4118) VAB027_2768 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_2768 PF08447 PAS fold VAB027_2768 PF13426 PAS domain VAB027_2768 PF00989 PAS fold VAB027_2769 PF00158 Sigma-54 interaction domain VAB027_2769 PF00072 Response regulator receiver domain VAB027_2769 PF02954 Bacterial regulatory protein, Fis family VAB027_2770 PF02561 Flagellar protein FliS VAB027_2772 PF07195 Flagellar hook-associated protein 2 C-terminus VAB027_2772 PF07196 Flagellin hook IN motif VAB027_2772 PF02465 Flagellar hook-associated protein 2 N-terminus VAB027_2773 PF03646 FlaG protein VAB027_2774 PF00669 Bacterial flagellin N-terminal helical region VAB027_2774 PF07196 Flagellin hook IN motif VAB027_2774 PF00700 Bacterial flagellin C-terminal helical region VAB027_2775 PF00669 Bacterial flagellin N-terminal helical region VAB027_2775 PF00700 Bacterial flagellin C-terminal helical region VAB027_2775 PF07196 Flagellin hook IN motif VAB027_2776 PF00700 Bacterial flagellin C-terminal helical region VAB027_2776 PF07196 Flagellin hook IN motif VAB027_2776 PF00669 Bacterial flagellin N-terminal helical region VAB027_2777 PF04261 Dyp-type peroxidase family VAB027_2781 PF03960 ArsC family VAB027_2782 PF01546 Peptidase family M20/M25/M40 VAB027_2782 PF07687 Peptidase dimerisation domain VAB027_2783 PF02557 D-alanyl-D-alanine carboxypeptidase VAB027_2785 PF06804 NlpB/DapX lipoprotein VAB027_2786 PF00701 Dihydrodipicolinate synthetase family VAB027_2788 PF00578 AhpC/TSA family VAB027_2789 PF00672 HAMP domain VAB027_2789 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_2789 PF02743 Cache domain VAB027_2790 PF01594 AI-2E family transporter VAB027_2792 PF13181 Tetratricopeptide repeat VAB027_2792 PF01435 Peptidase family M48 VAB027_2793 PF03960 ArsC family VAB027_2794 PF03358 NADPH-dependent FMN reductase VAB027_2796 PF01797 Transposase IS200 like VAB027_2798 PF00860 Permease family VAB027_2799 PF04073 Aminoacyl-tRNA editing domain VAB027_28 PF03006 Haemolysin-III related VAB027_2800 PF00149 Calcineurin-like phosphoesterase VAB027_2800 PF02872 5'-nucleotidase, C-terminal domain VAB027_2801 PF00793 DAHP synthetase I family VAB027_2802 PF13369 Transglutaminase-like superfamily VAB027_2803 PF04247 Invasion gene expression up-regulator, SirB VAB027_2804 PF17827 PrmC N-terminal domain VAB027_2804 PF13847 Methyltransferase domain VAB027_2805 PF00472 RF-1 domain VAB027_2805 PF03462 PCRF domain VAB027_2806 PF01488 Shikimate / quinate 5-dehydrogenase VAB027_2806 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VAB027_2806 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VAB027_2807 PF03550 Outer membrane lipoprotein LolB VAB027_2808 PF08544 GHMP kinases C terminal VAB027_2808 PF00288 GHMP kinases N terminal domain VAB027_2809 PF14572 Phosphoribosyl synthetase-associated domain VAB027_2809 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VAB027_2810 PF01195 Peptidyl-tRNA hydrolase VAB027_2811 PF06071 Protein of unknown function (DUF933) VAB027_2811 PF01926 50S ribosome-binding GTPase VAB027_2830 PF00700 Bacterial flagellin C-terminal helical region VAB027_2830 PF07196 Flagellin hook IN motif VAB027_2830 PF00669 Bacterial flagellin N-terminal helical region VAB027_2831 PF00700 Bacterial flagellin C-terminal helical region VAB027_2831 PF00669 Bacterial flagellin N-terminal helical region VAB027_2831 PF07196 Flagellin hook IN motif VAB027_2833 PF07196 Flagellin hook IN motif VAB027_2833 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAB027_2834 PF10135 Rod binding protein VAB027_2834 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VAB027_2835 PF02119 Flagellar P-ring protein VAB027_2836 PF02107 Flagellar L-ring protein VAB027_2837 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAB027_2837 PF00460 Flagella basal body rod protein VAB027_2838 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAB027_2838 PF00460 Flagella basal body rod protein VAB027_2839 PF07559 Flagellar basal body protein FlaE VAB027_2839 PF00460 Flagella basal body rod protein VAB027_2839 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAB027_2840 PF03963 Flagellar hook capping protein - N-terminal region VAB027_2840 PF13860 FlgD Ig-like domain VAB027_2840 PF13861 FlgD Tudor-like domain VAB027_2841 PF00460 Flagella basal body rod protein VAB027_2841 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAB027_2842 PF00460 Flagella basal body rod protein VAB027_2843 PF01739 CheR methyltransferase, SAM binding domain VAB027_2843 PF03705 CheR methyltransferase, all-alpha domain VAB027_2844 PF00072 Response regulator receiver domain VAB027_2844 PF01584 CheW-like domain VAB027_2851 PF08242 Methyltransferase domain VAB027_2851 PF00668 Condensation domain VAB027_2851 PF00501 AMP-binding enzyme VAB027_2851 PF00550 Phosphopantetheine attachment site VAB027_2852 PF04954 Siderophore-interacting protein VAB027_2852 PF08021 Siderophore-interacting FAD-binding domain VAB027_2853 PF07715 TonB-dependent Receptor Plug Domain VAB027_2855 PF01389 OmpA-like transmembrane domain VAB027_2855 PF00691 OmpA family VAB027_2856 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAB027_2857 PF00403 Heavy-metal-associated domain VAB027_2859 PF00728 Glycosyl hydrolase family 20, catalytic domain VAB027_2859 PF02838 Glycosyl hydrolase family 20, domain 2 VAB027_2859 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VAB027_2859 PF03173 Putative carbohydrate binding domain VAB027_2864 PF01713 Smr domain VAB027_2865 PF01479 S4 domain VAB027_2865 PF00849 RNA pseudouridylate synthase VAB027_2866 PF01609 Transposase DDE domain VAB027_2866 PF14706 Transposase DNA-binding VAB027_2866 PF02281 Transposase Tn5 dimerisation domain VAB027_2867 PF08448 PAS fold VAB027_2867 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2869 PF02769 AIR synthase related protein, C-terminal domain VAB027_2869 PF00586 AIR synthase related protein, N-terminal domain VAB027_2870 PF00551 Formyl transferase VAB027_2871 PF13230 Glutamine amidotransferases class-II VAB027_2872 PF13580 SIS domain VAB027_2873 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAB027_2873 PF02770 Acyl-CoA dehydrogenase, middle domain VAB027_2873 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAB027_2873 PF09317 Domain of unknown function (DUF1974) VAB027_2875 PF00929 Exonuclease VAB027_2876 PF00075 RNase H VAB027_2877 PF08241 Methyltransferase domain VAB027_2878 PF16123 Hydroxyacylglutathione hydrolase C-terminus VAB027_2878 PF00753 Metallo-beta-lactamase superfamily VAB027_2879 PF01464 Transglycosylase SLT domain VAB027_2879 PF01476 LysM domain VAB027_2880 PF03372 Endonuclease/Exonuclease/phosphatase family VAB027_2881 PF00543 Nitrogen regulatory protein P-II VAB027_2882 PF05870 Phenolic acid decarboxylase (PAD) VAB027_2883 PF00034 Cytochrome c VAB027_2884 PF09179 TilS substrate binding domain VAB027_2884 PF01171 PP-loop family VAB027_2884 PF11734 TilS substrate C-terminal domain VAB027_2885 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VAB027_2886 PF01336 OB-fold nucleic acid binding domain VAB027_2886 PF02811 PHP domain VAB027_2886 PF14579 Helix-hairpin-helix motif VAB027_2886 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAB027_2886 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAB027_2887 PF01351 Ribonuclease HII VAB027_2888 PF02684 Lipid-A-disaccharide synthetase VAB027_2889 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VAB027_2889 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_2890 PF07977 FabA-like domain VAB027_2891 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VAB027_2891 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_2892 PF03938 Outer membrane protein (OmpH-like) VAB027_2893 PF07244 Surface antigen variable number repeat VAB027_2893 PF01103 Surface antigen VAB027_2894 PF17820 PDZ domain VAB027_2894 PF02163 Peptidase family M50 VAB027_2895 PF13288 DXP reductoisomerase C-terminal domain VAB027_2895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VAB027_2895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VAB027_2897 PF01255 Putative undecaprenyl diphosphate synthase VAB027_2898 PF01765 Ribosome recycling factor VAB027_2899 PF00696 Amino acid kinase family VAB027_2900 PF00889 Elongation factor TS VAB027_2901 PF00318 Ribosomal protein S2 VAB027_2902 PF00557 Metallopeptidase family M24 VAB027_2903 PF01909 Nucleotidyltransferase domain VAB027_2903 PF01966 HD domain VAB027_2903 PF08335 GlnD PII-uridylyltransferase VAB027_2904 PF11944 Protein of unknown function (DUF3461) VAB027_2905 PF04608 Phosphatidylglycerophosphatase A VAB027_2906 PF00586 AIR synthase related protein, N-terminal domain VAB027_2906 PF02769 AIR synthase related protein, C-terminal domain VAB027_2907 PF01029 NusB family VAB027_2908 PF00885 6,7-dimethyl-8-ribityllumazine synthase VAB027_2909 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VAB027_2909 PF00925 GTP cyclohydrolase II VAB027_2910 PF00677 Lumazine binding domain VAB027_2911 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAB027_2911 PF01872 RibD C-terminal domain VAB027_2912 PF03477 ATP cone domain VAB027_2913 PF00171 Aldehyde dehydrogenase family VAB027_2914 PF00696 Amino acid kinase family VAB027_2914 PF01472 PUA domain VAB027_2915 PF07417 Sigma factor-binding transcriptional regulator Crl VAB027_2917 PF00156 Phosphoribosyl transferase domain VAB027_2918 PF00860 Permease family VAB027_2919 PF01546 Peptidase family M20/M25/M40 VAB027_2919 PF07687 Peptidase dimerisation domain VAB027_2920 PF08443 RimK-like ATP-grasp domain VAB027_2920 PF18030 RimK PreATP-grasp domain VAB027_2921 PF18030 RimK PreATP-grasp domain VAB027_2921 PF08443 RimK-like ATP-grasp domain VAB027_2923 PF00209 Sodium:neurotransmitter symporter family VAB027_2924 PF17158 Membrane-associated sensor, integral membrane domain VAB027_2924 PF00990 Diguanylate cyclase, GGDEF domain VAB027_2926 PF11798 IMS family HHH motif VAB027_2926 PF00817 impB/mucB/samB family VAB027_2928 PF02424 ApbE family VAB027_2929 PF00175 Oxidoreductase NAD-binding domain VAB027_2929 PF00970 Oxidoreductase FAD-binding domain VAB027_2929 PF00111 2Fe-2S iron-sulfur cluster binding domain VAB027_2930 PF02508 Rnf-Nqr subunit, membrane protein VAB027_2931 PF02508 Rnf-Nqr subunit, membrane protein VAB027_2932 PF04205 FMN-binding domain VAB027_2933 PF03116 NQR2, RnfD, RnfE family VAB027_2934 PF11973 NQRA C-terminal domain VAB027_2934 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VAB027_2935 PF01722 BolA-like protein VAB027_2936 PF05175 Methyltransferase small domain VAB027_2938 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAB027_2939 PF07690 Major Facilitator Superfamily VAB027_2941 PF04542 Sigma-70 region 2 VAB027_2941 PF04545 Sigma-70, region 4 VAB027_2943 PF03502 Nucleoside-specific channel-forming protein, Tsx VAB027_2944 PF02558 Ketopantoate reductase PanE/ApbA VAB027_2944 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAB027_2945 PF01965 DJ-1/PfpI family VAB027_2946 PF00266 Aminotransferase class-V VAB027_2947 PF02657 Fe-S metabolism associated domain VAB027_2948 PF00899 ThiF family VAB027_2949 PF06725 3D domain VAB027_2949 PF03562 MltA specific insert domain VAB027_2951 PF00696 Amino acid kinase family VAB027_2951 PF00583 Acetyltransferase (GNAT) family VAB027_2953 PF13538 UvrD-like helicase C-terminal domain VAB027_2954 PF12705 PD-(D/E)XK nuclease superfamily VAB027_2954 PF13361 UvrD-like helicase C-terminal domain VAB027_2954 PF00580 UvrD/REP helicase N-terminal domain VAB027_2956 PF17946 RecC C-terminal domain VAB027_2959 PF07130 YebG protein VAB027_2960 PF14602 Hexapeptide repeat of succinyl-transferase VAB027_2960 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VAB027_2962 PF00583 Acetyltransferase (GNAT) family VAB027_2964 PF08443 RimK-like ATP-grasp domain VAB027_2964 PF18030 RimK PreATP-grasp domain VAB027_2964 PF02080 TrkA-C domain VAB027_2965 PF01544 CorA-like Mg2+ transporter protein VAB027_2966 PF01588 Putative tRNA binding domain VAB027_2968 PF02929 Beta galactosidase small chain VAB027_2968 PF00703 Glycosyl hydrolases family 2 VAB027_2968 PF16353 Domain of unknown function(DUF4981) VAB027_2968 PF02837 Glycosyl hydrolases family 2, sugar binding domain VAB027_2968 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VAB027_2969 PF00356 Bacterial regulatory proteins, lacI family VAB027_2971 PF00072 Response regulator receiver domain VAB027_2972 PF00501 AMP-binding enzyme VAB027_2973 PF00679 Elongation factor G C-terminus VAB027_2973 PF03144 Elongation factor Tu domain 2 VAB027_2973 PF00009 Elongation factor Tu GTP binding domain VAB027_2973 PF03764 Elongation factor G, domain IV VAB027_2973 PF14492 Elongation Factor G, domain II VAB027_2974 PF18073 Rubredoxin metal binding domain VAB027_2976 PF18429 Domain of unknown function (DUF5609) VAB027_2978 PF01048 Phosphorylase superfamily VAB027_2979 PF01676 Metalloenzyme superfamily VAB027_2980 PF02885 Glycosyl transferase family, helical bundle domain VAB027_2980 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VAB027_2980 PF00591 Glycosyl transferase family, a/b domain VAB027_2981 PF01791 DeoC/LacD family aldolase VAB027_2982 PF07662 Na+ dependent nucleoside transporter C-terminus VAB027_2982 PF07670 Nucleoside recognition VAB027_2982 PF01773 Na+ dependent nucleoside transporter N-terminus VAB027_2983 PF01026 TatD related DNase VAB027_2985 PF03883 Peroxide stress protein YaaA VAB027_2986 PF01235 Sodium:alanine symporter family VAB027_2989 PF03167 Uracil DNA glycosylase superfamily VAB027_2990 PF01261 Xylose isomerase-like TIM barrel VAB027_2991 PF01228 Glycine radical VAB027_2992 PF14821 Threonine synthase N terminus VAB027_2992 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_2993 PF00288 GHMP kinases N terminal domain VAB027_2993 PF08544 GHMP kinases C terminal VAB027_2994 PF13840 ACT domain VAB027_2994 PF01842 ACT domain VAB027_2994 PF00696 Amino acid kinase family VAB027_2994 PF03447 Homoserine dehydrogenase, NAD binding domain VAB027_2994 PF00742 Homoserine dehydrogenase VAB027_2995 PF03737 Aldolase/RraA VAB027_2998 PF00486 Transcriptional regulatory protein, C terminal VAB027_2998 PF00072 Response regulator receiver domain VAB027_2999 PF00072 Response regulator receiver domain VAB027_2999 PF00989 PAS fold VAB027_2999 PF01627 Hpt domain VAB027_2999 PF18415 Histidine kinase receptor ArcB trans-membrane domain VAB027_2999 PF00512 His Kinase A (phospho-acceptor) domain VAB027_2999 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_3 PF02463 RecF/RecN/SMC N terminal domain VAB027_30 PF02386 Cation transport protein VAB027_3000 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3000 PF00563 EAL domain VAB027_3000 PF01590 GAF domain VAB027_3000 PF00360 Phytochrome region VAB027_3001 PF04055 Radical SAM superfamily VAB027_3001 PF16199 Radical_SAM C-terminal domain VAB027_3004 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAB027_3004 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_3005 PF01493 GXGXG motif VAB027_3005 PF04898 Glutamate synthase central domain VAB027_3005 PF01645 Conserved region in glutamate synthase VAB027_3005 PF00310 Glutamine amidotransferases class-II VAB027_3006 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAB027_3006 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_3008 PF01048 Phosphorylase superfamily VAB027_301 PF00575 S1 RNA binding domain VAB027_301 PF00773 RNB domain VAB027_301 PF08206 Ribonuclease B OB domain VAB027_301 PF08461 Ribonuclease R winged-helix domain VAB027_301 PF17876 Cold shock domain VAB027_3010 PF01497 Periplasmic binding protein VAB027_3011 PF03458 UPF0126 domain VAB027_3012 PF01925 Sulfite exporter TauE/SafE VAB027_3013 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3013 PF03466 LysR substrate binding domain VAB027_3017 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VAB027_3017 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAB027_3017 PF02142 MGS-like domain VAB027_3018 PF00117 Glutamine amidotransferase class-I VAB027_3018 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VAB027_3019 PF01113 Dihydrodipicolinate reductase, N-terminus VAB027_3019 PF05173 Dihydrodipicolinate reductase, C-terminus VAB027_302 PF00313 'Cold-shock' DNA-binding domain VAB027_3020 PF00293 NUDIX domain VAB027_3021 PF07516 SecA Wing and Scaffold domain VAB027_3021 PF02810 SEC-C motif VAB027_3021 PF07517 SecA DEAD-like domain VAB027_3021 PF01043 SecA preprotein cross-linking domain VAB027_3023 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VAB027_3024 PF12327 FtsZ family, C-terminal domain VAB027_3024 PF00091 Tubulin/FtsZ family, GTPase domain VAB027_3025 PF02491 SHS2 domain inserted in FTSA VAB027_3026 PF08478 POTRA domain, FtsQ-type VAB027_3026 PF03799 Cell division protein FtsQ VAB027_3027 PF01225 Mur ligase family, catalytic domain VAB027_3027 PF02875 Mur ligase family, glutamate ligase domain VAB027_3027 PF08245 Mur ligase middle domain VAB027_3028 PF03033 Glycosyltransferase family 28 N-terminal domain VAB027_3028 PF04101 Glycosyltransferase family 28 C-terminal domain VAB027_3029 PF01098 Cell cycle protein VAB027_303 PF18642 Immunomodulating metalloprotease helical domain VAB027_303 PF13402 Peptidase M60, enhancin and enhancin-like VAB027_303 PF18650 Immunomodulating metalloprotease N-terminal domain VAB027_3030 PF08245 Mur ligase middle domain VAB027_3030 PF02875 Mur ligase family, glutamate ligase domain VAB027_3031 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VAB027_3031 PF00953 Glycosyl transferase family 4 VAB027_3032 PF02875 Mur ligase family, glutamate ligase domain VAB027_3032 PF01225 Mur ligase family, catalytic domain VAB027_3032 PF08245 Mur ligase middle domain VAB027_3033 PF01225 Mur ligase family, catalytic domain VAB027_3033 PF02875 Mur ligase family, glutamate ligase domain VAB027_3033 PF08245 Mur ligase middle domain VAB027_3034 PF03717 Penicillin-binding Protein dimerisation domain VAB027_3034 PF00905 Penicillin binding protein transpeptidase domain VAB027_3035 PF04999 Cell division protein FtsL VAB027_3036 PF01795 MraW methylase family VAB027_3037 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAB027_3037 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_3038 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAB027_3038 PF02817 e3 binding domain VAB027_3038 PF00364 Biotin-requiring enzyme VAB027_3039 PF00456 Transketolase, thiamine diphosphate binding domain VAB027_3039 PF17831 Pyruvate dehydrogenase E1 component middle domain VAB027_3040 PF07729 FCD domain VAB027_3040 PF00392 Bacterial regulatory proteins, gntR family VAB027_3041 PF00149 Calcineurin-like phosphoesterase VAB027_3041 PF02872 5'-nucleotidase, C-terminal domain VAB027_3042 PF17768 RecJ OB domain VAB027_3042 PF02272 DHHA1 domain VAB027_3042 PF01368 DHH family VAB027_3043 PF10411 Disulfide bond isomerase protein N-terminus VAB027_3043 PF13098 Thioredoxin-like domain VAB027_3044 PF02899 Phage integrase, N-terminal SAM-like domain VAB027_3044 PF00589 Phage integrase family VAB027_3045 PF00258 Flavodoxin VAB027_3046 PF01609 Transposase DDE domain VAB027_3046 PF02281 Transposase Tn5 dimerisation domain VAB027_3046 PF14706 Transposase DNA-binding VAB027_3047 PF01510 N-acetylmuramoyl-L-alanine amidase VAB027_3048 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VAB027_3048 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VAB027_3049 PF07963 Prokaryotic N-terminal methylation motif VAB027_3049 PF00114 Pilin (bacterial filament) VAB027_3050 PF00437 Type II/IV secretion system protein VAB027_3050 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAB027_3051 PF00482 Type II secretion system (T2SS), protein F VAB027_3052 PF01478 Type IV leader peptidase family VAB027_3052 PF06750 Bacterial Peptidase A24 N-terminal domain VAB027_3053 PF01121 Dephospho-CoA kinase VAB027_3054 PF07072 Cell division protein VAB027_3055 PF03884 DNA gyrase inhibitor YacG VAB027_3056 PF03989 DNA gyrase C-terminal domain, beta-propeller VAB027_3056 PF00521 DNA gyrase/topoisomerase IV, subunit A VAB027_3057 PF01751 Toprim domain VAB027_3057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_3057 PF00204 DNA gyrase B VAB027_3057 PF00986 DNA gyrase B subunit, carboxyl terminus VAB027_3058 PF05728 Uncharacterised protein family (UPF0227) VAB027_3059 PF00149 Calcineurin-like phosphoesterase VAB027_3060 PF06853 Protein of unknown function (DUF1249) VAB027_3061 PF00293 NUDIX domain VAB027_3062 PF02321 Outer membrane efflux protein VAB027_3063 PF00294 pfkB family carbohydrate kinase VAB027_3063 PF01467 Cytidylyltransferase-like VAB027_3064 PF03710 Glutamate-ammonia ligase adenylyltransferase VAB027_3064 PF08335 GlnD PII-uridylyltransferase VAB027_3065 PF02743 Cache domain VAB027_3065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_3065 PF00672 HAMP domain VAB027_3067 PF01928 CYTH domain VAB027_3068 PF01865 Protein of unknown function DUF47 VAB027_3069 PF01384 Phosphate transporter family VAB027_3070 PF08239 Bacterial SH3 domain VAB027_3072 PF13401 AAA domain VAB027_3072 PF01471 Putative peptidoglycan binding domain VAB027_3073 PF01966 HD domain VAB027_3073 PF01743 Poly A polymerase head domain VAB027_3073 PF12627 Probable RNA and SrmB- binding site of polymerase A VAB027_3074 PF03952 Enolase, N-terminal domain VAB027_3074 PF00113 Enolase, C-terminal TIM barrel domain VAB027_3075 PF06418 CTP synthase N-terminus VAB027_3075 PF00117 Glutamine amidotransferase class-I VAB027_3076 PF03819 MazG nucleotide pyrophosphohydrolase domain VAB027_3077 PF13291 ACT domain VAB027_3077 PF02824 TGS domain VAB027_3077 PF04607 Region found in RelA / SpoT proteins VAB027_3078 PF01938 TRAM domain VAB027_3078 PF05958 tRNA (Uracil-5-)-methyltransferase VAB027_3079 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_3080 PF00072 Response regulator receiver domain VAB027_3080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VAB027_3080 PF01627 Hpt domain VAB027_3080 PF00672 HAMP domain VAB027_3080 PF00512 His Kinase A (phospho-acceptor) domain VAB027_3083 PF01648 4'-phosphopantetheinyl transferase superfamily VAB027_3084 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VAB027_3085 PF11967 Recombination protein O N terminal VAB027_3085 PF02565 Recombination protein O C terminal VAB027_3086 PF07650 KH domain VAB027_3086 PF01926 50S ribosome-binding GTPase VAB027_3087 PF00035 Double-stranded RNA binding motif VAB027_3087 PF14622 Ribonuclease-III-like VAB027_3088 PF10502 Signal peptidase, peptidase S26 VAB027_3089 PF00009 Elongation factor Tu GTP binding domain VAB027_3089 PF03144 Elongation factor Tu domain 2 VAB027_3089 PF00679 Elongation factor G C-terminus VAB027_3089 PF06421 GTP-binding protein LepA C-terminus VAB027_3091 PF03888 MucB/RseB N-terminal domain VAB027_3091 PF17188 MucB/RseB C-terminal domain VAB027_3092 PF03872 Anti sigma-E protein RseA, N-terminal domain VAB027_3092 PF03873 Anti sigma-E protein RseA, C-terminal domain VAB027_3093 PF04542 Sigma-70 region 2 VAB027_3093 PF08281 Sigma-70, region 4 VAB027_3094 PF00890 FAD binding domain VAB027_3094 PF02910 Fumarate reductase flavoprotein C-term VAB027_3096 PF03937 Flavinator of succinate dehydrogenase VAB027_3099 PF01494 FAD binding domain VAB027_31 PF02080 TrkA-C domain VAB027_31 PF02254 TrkA-N domain VAB027_3100 PF01494 FAD binding domain VAB027_3101 PF03695 Uncharacterised protein family (UPF0149) VAB027_3102 PF05164 Cell division protein ZapA VAB027_3103 PF01812 5-formyltetrahydrofolate cyclo-ligase family VAB027_3104 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VAB027_3105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAB027_3105 PF01842 ACT domain VAB027_3105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAB027_3106 PF10369 Small subunit of acetolactate synthase VAB027_3107 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAB027_3107 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAB027_3107 PF00205 Thiamine pyrophosphate enzyme, central domain VAB027_3108 PF00501 AMP-binding enzyme VAB027_3109 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3109 PF03466 LysR substrate binding domain VAB027_3111 PF01569 PAP2 superfamily VAB027_3112 PF00682 HMGL-like VAB027_3112 PF08502 LeuA allosteric (dimerisation) domain VAB027_3113 PF00180 Isocitrate/isopropylmalate dehydrogenase VAB027_3114 PF00330 Aconitase family (aconitate hydratase) VAB027_3115 PF00694 Aconitase C-terminal domain VAB027_3124 PF07724 AAA domain (Cdc48 subfamily) VAB027_3124 PF02861 Clp amino terminal domain, pathogenicity island component VAB027_3124 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_3124 PF17871 AAA lid domain VAB027_3124 PF10431 C-terminal, D2-small domain, of ClpB protein VAB027_3126 PF01479 S4 domain VAB027_3126 PF00849 RNA pseudouridylate synthase VAB027_3127 PF13525 Outer membrane lipoprotein VAB027_3128 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAB027_3129 PF00800 Prephenate dehydratase VAB027_3129 PF01817 Chorismate mutase type II VAB027_313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_313 PF03466 LysR substrate binding domain VAB027_3130 PF13416 Bacterial extracellular solute-binding protein VAB027_3131 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3131 PF00563 EAL domain VAB027_314 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_3140 PF00005 ABC transporter VAB027_3147 PF01931 Protein of unknown function DUF84 VAB027_3148 PF01371 Trp repressor protein VAB027_3149 PF01464 Transglycosylase SLT domain VAB027_3149 PF14718 Soluble lytic murein transglycosylase L domain VAB027_3150 PF00005 ABC transporter VAB027_3150 PF12848 ABC transporter VAB027_3151 PF07238 PilZ domain VAB027_3152 PF01817 Chorismate mutase type II VAB027_3152 PF02153 Prephenate dehydrogenase VAB027_3153 PF00793 DAHP synthetase I family VAB027_3154 PF07694 5TMR of 5TMR-LYT VAB027_3154 PF06580 Histidine kinase VAB027_3155 PF04397 LytTr DNA-binding domain VAB027_3155 PF00072 Response regulator receiver domain VAB027_3156 PF00933 Glycosyl hydrolase family 3 N terminal domain VAB027_3157 PF03702 Anhydro-N-acetylmuramic acid kinase VAB027_3158 PF13580 SIS domain VAB027_316 PF00313 'Cold-shock' DNA-binding domain VAB027_3161 PF02554 Carbon starvation protein CstA VAB027_3162 PF02401 LytB protein VAB027_3163 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAB027_3164 PF01252 Signal peptidase (SPase) II VAB027_3165 PF08264 Anticodon-binding domain of tRNA VAB027_3165 PF00133 tRNA synthetases class I (I, L, M and V) VAB027_3165 PF06827 Zinc finger found in FPG and IleRS VAB027_3166 PF06574 FAD synthetase VAB027_3166 PF01687 Riboflavin kinase VAB027_3167 PF03023 Lipid II flippase MurJ VAB027_3168 PF01649 Ribosomal protein S20 VAB027_3169 PF01022 Bacterial regulatory protein, arsR family VAB027_317 PF14706 Transposase DNA-binding VAB027_317 PF02281 Transposase Tn5 dimerisation domain VAB027_317 PF01609 Transposase DDE domain VAB027_3170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3170 PF03466 LysR substrate binding domain VAB027_3171 PF02690 Na+/Pi-cotransporter VAB027_3172 PF00303 Thymidylate synthase VAB027_3173 PF01790 Prolipoprotein diacylglyceryl transferase VAB027_3174 PF01925 Sulfite exporter TauE/SafE VAB027_3175 PF02896 PEP-utilising enzyme, TIM barrel domain VAB027_3175 PF00391 PEP-utilising enzyme, mobile domain VAB027_3175 PF05524 PEP-utilising enzyme, N-terminal VAB027_3175 PF01590 GAF domain VAB027_3176 PF00293 NUDIX domain VAB027_3177 PF02976 DNA mismatch repair enzyme MutH VAB027_3178 PF00248 Aldo/keto reductase family VAB027_318 PF00575 S1 RNA binding domain VAB027_318 PF00773 RNB domain VAB027_318 PF08206 Ribonuclease B OB domain VAB027_318 PF08461 Ribonuclease R winged-helix domain VAB027_318 PF17876 Cold shock domain VAB027_3180 PF02954 Bacterial regulatory protein, Fis family VAB027_3180 PF00072 Response regulator receiver domain VAB027_3180 PF00158 Sigma-54 interaction domain VAB027_3181 PF01336 OB-fold nucleic acid binding domain VAB027_3181 PF00152 tRNA synthetases class II (D, K and N) VAB027_3182 PF03462 PCRF domain VAB027_3182 PF00472 RF-1 domain VAB027_3183 PF05525 Branched-chain amino acid transport protein VAB027_3184 PF05175 Methyltransferase small domain VAB027_3187 PF00009 Elongation factor Tu GTP binding domain VAB027_3187 PF16658 Class II release factor RF3, C-terminal domain VAB027_3187 PF03144 Elongation factor Tu domain 2 VAB027_3189 PF00563 EAL domain VAB027_3189 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3189 PF03707 Bacterial signalling protein N terminal repeat VAB027_319 PF17876 Cold shock domain VAB027_319 PF08461 Ribonuclease R winged-helix domain VAB027_319 PF08206 Ribonuclease B OB domain VAB027_319 PF00773 RNB domain VAB027_319 PF00575 S1 RNA binding domain VAB027_3191 PF13508 Acetyltransferase (GNAT) domain VAB027_3193 PF00563 EAL domain VAB027_3193 PF03707 Bacterial signalling protein N terminal repeat VAB027_3193 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3198 PF07719 Tetratricopeptide repeat VAB027_3198 PF13181 Tetratricopeptide repeat VAB027_3199 PF00013 KH domain VAB027_3199 PF03725 3' exoribonuclease family, domain 2 VAB027_3199 PF01138 3' exoribonuclease family, domain 1 VAB027_3199 PF00575 S1 RNA binding domain VAB027_3199 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VAB027_32 PF01029 NusB family VAB027_32 PF01189 16S rRNA methyltransferase RsmB/F VAB027_320 PF00768 D-alanyl-D-alanine carboxypeptidase VAB027_3200 PF00312 Ribosomal protein S15 VAB027_3201 PF16198 tRNA pseudouridylate synthase B C-terminal domain VAB027_3201 PF09157 Pseudouridine synthase II TruB, C-terminal VAB027_3201 PF01509 TruB family pseudouridylate synthase (N terminal domain) VAB027_3202 PF02033 Ribosome-binding factor A VAB027_3203 PF08364 Bacterial translation initiation factor IF-2 associated region VAB027_3203 PF04760 Translation initiation factor IF-2, N-terminal region VAB027_3203 PF11987 Translation-initiation factor 2 VAB027_3203 PF00009 Elongation factor Tu GTP binding domain VAB027_3204 PF08529 NusA N-terminal domain VAB027_3204 PF13184 NusA-like KH domain VAB027_3204 PF00575 S1 RNA binding domain VAB027_3205 PF02576 RimP N-terminal domain VAB027_3205 PF17384 RimP C-terminal SH3 domain VAB027_3208 PF03840 Preprotein translocase SecG subunit VAB027_3210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAB027_3210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAB027_3210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAB027_3210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAB027_3211 PF00809 Pterin binding enzyme VAB027_3212 PF01434 Peptidase family M41 VAB027_3212 PF06480 FtsH Extracellular VAB027_3212 PF17862 AAA+ lid domain VAB027_3212 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_3213 PF01728 FtsJ-like methyltransferase VAB027_3214 PF01985 CRS1 / YhbY (CRM) domain VAB027_3215 PF01272 Transcription elongation factor, GreA/GreB, C-term VAB027_3215 PF03449 Transcription elongation factor, N-terminal VAB027_3216 PF13609 Gram-negative porin VAB027_3217 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VAB027_3218 PF00579 tRNA synthetases class I (W and Y) VAB027_3218 PF01479 S4 domain VAB027_3219 PF04225 Opacity-associated protein A LysM-like domain VAB027_3219 PF01551 Peptidase family M23 VAB027_3220 PF00873 AcrB/AcrD/AcrF family VAB027_3222 PF01521 Iron-sulphur cluster biosynthesis VAB027_3223 PF00202 Aminotransferase class-III VAB027_3225 PF01594 AI-2E family transporter VAB027_3226 PF05175 Methyltransferase small domain VAB027_3226 PF08468 Methyltransferase small domain N-terminal VAB027_3227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_3227 PF00672 HAMP domain VAB027_3227 PF00512 His Kinase A (phospho-acceptor) domain VAB027_3227 PF01627 Hpt domain VAB027_3227 PF00072 Response regulator receiver domain VAB027_3227 PF17149 Periplasmic sensor domain found in signal transduction proteins VAB027_3228 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAB027_3229 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_323 PF03922 OmpW family VAB027_3230 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_3230 PF12911 N-terminal TM domain of oligopeptide transport permease C VAB027_3231 PF00005 ABC transporter VAB027_3231 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_3232 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_3232 PF00005 ABC transporter VAB027_3234 PF01869 BadF/BadG/BcrA/BcrD ATPase family VAB027_3235 PF02838 Glycosyl hydrolase family 20, domain 2 VAB027_3235 PF00728 Glycosyl hydrolase family 20, catalytic domain VAB027_3236 PF06165 Glycosyltransferase family 36 VAB027_3236 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VAB027_3237 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAB027_3237 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAB027_3237 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAB027_3237 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAB027_3238 PF08402 TOBE domain VAB027_3238 PF00005 ABC transporter VAB027_324 PF04151 Bacterial pre-peptidase C-terminal domain VAB027_324 PF03413 Peptidase propeptide and YPEB domain VAB027_324 PF01447 Thermolysin metallopeptidase, catalytic domain VAB027_324 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAB027_324 PF07504 Fungalysin/Thermolysin Propeptide Motif VAB027_3240 PF13416 Bacterial extracellular solute-binding protein VAB027_3241 PF00909 Ammonium Transporter Family VAB027_3242 PF00543 Nitrogen regulatory protein P-II VAB027_3243 PF06062 Uncharacterised protein family (UPF0231) VAB027_3244 PF06434 Aconitate hydratase 2 N-terminus VAB027_3244 PF11791 Aconitate B N-terminal domain VAB027_3244 PF00330 Aconitase family (aconitate hydratase) VAB027_3245 PF01734 Patatin-like phospholipase VAB027_3246 PF00912 Transglycosylase VAB027_3246 PF00905 Penicillin binding protein transpeptidase domain VAB027_3246 PF14814 Bifunctional transglycosylase second domain VAB027_3247 PF08482 ATP-dependent helicase C-terminal VAB027_3247 PF00271 Helicase conserved C-terminal domain VAB027_3247 PF04408 Helicase associated domain (HA2) VAB027_3247 PF00270 DEAD/DEAH box helicase VAB027_3249 PF03749 Sugar fermentation stimulation protein RE domain VAB027_3249 PF17746 SfsA N-terminal OB domain VAB027_325 PF13426 PAS domain VAB027_325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_325 PF08447 PAS fold VAB027_3250 PF01258 Prokaryotic dksA/traR C4-type zinc finger VAB027_3251 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAB027_3252 PF12627 Probable RNA and SrmB- binding site of polymerase A VAB027_3252 PF12626 Polymerase A arginine-rich C-terminus VAB027_3252 PF01743 Poly A polymerase head domain VAB027_3253 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAB027_3254 PF02548 Ketopantoate hydroxymethyltransferase VAB027_3255 PF02569 Pantoate-beta-alanine ligase VAB027_3256 PF01061 ABC-2 type transporter VAB027_3257 PF00005 ABC transporter VAB027_3258 PF01740 STAS domain VAB027_3258 PF00916 Sulfate permease family VAB027_3259 PF00484 Carbonic anhydrase VAB027_326 PF13737 Transposase DDE domain VAB027_3260 PF00156 Phosphoribosyl transferase domain VAB027_3261 PF00440 Bacterial regulatory proteins, tetR family VAB027_3262 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAB027_3263 PF04348 LppC putative lipoprotein VAB027_3264 PF02021 Uncharacterised protein family UPF0102 VAB027_3265 PF13580 SIS domain VAB027_3266 PF04972 BON domain VAB027_3267 PF04386 Stringent starvation protein B VAB027_3268 PF00043 Glutathione S-transferase, C-terminal domain VAB027_3268 PF02798 Glutathione S-transferase, N-terminal domain VAB027_3269 PF02167 Cytochrome C1 family VAB027_3270 PF00032 Cytochrome b(C-terminal)/b6/petD VAB027_3270 PF00033 Cytochrome b/b6/petB VAB027_3271 PF00355 Rieske [2Fe-2S] domain VAB027_3271 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VAB027_3272 PF00380 Ribosomal protein S9/S16 VAB027_3273 PF00572 Ribosomal protein L13 VAB027_3274 PF03969 AFG1-like ATPase VAB027_3276 PF00595 PDZ domain VAB027_3277 PF13180 PDZ domain VAB027_3278 PF01245 Ribosomal protein L19 VAB027_3279 PF01746 tRNA (Guanine-1)-methyltransferase VAB027_328 PF12262 Bacterial virulence factor lipase N-terminal VAB027_3280 PF01782 RimM N-terminal domain VAB027_3280 PF05239 PRC-barrel domain VAB027_3281 PF00886 Ribosomal protein S16 VAB027_3282 PF02978 Signal peptide binding domain VAB027_3282 PF02881 SRP54-type protein, helical bundle domain VAB027_3282 PF00448 SRP54-type protein, GTPase domain VAB027_3284 PF01578 Cytochrome C assembly protein VAB027_3285 PF00571 CBS domain VAB027_3285 PF03471 Transporter associated domain VAB027_3285 PF01595 Cyclin M transmembrane N-terminal domain VAB027_3286 PF02664 S-Ribosylhomocysteinase (LuxS) VAB027_3287 PF04262 Glutamate-cysteine ligase VAB027_3288 PF05193 Peptidase M16 inactive domain VAB027_3288 PF00675 Insulinase (Peptidase family M16) VAB027_3289 PF09335 SNARE associated Golgi protein VAB027_329 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAB027_3291 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VAB027_3292 PF00364 Biotin-requiring enzyme VAB027_3292 PF00682 HMGL-like VAB027_3292 PF02436 Conserved carboxylase domain VAB027_3293 PF04277 Oxaloacetate decarboxylase, gamma chain VAB027_33 PF00551 Formyl transferase VAB027_33 PF02911 Formyl transferase, C-terminal domain VAB027_330 PF00128 Alpha amylase, catalytic domain VAB027_3302 PF02599 Global regulator protein family VAB027_3303 PF13840 ACT domain VAB027_3303 PF00696 Amino acid kinase family VAB027_3303 PF01842 ACT domain VAB027_3304 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAB027_3304 PF01411 tRNA synthetases class II (A) VAB027_3304 PF02272 DHHA1 domain VAB027_3305 PF02631 RecX family VAB027_3306 PF00154 recA bacterial DNA recombination protein VAB027_3307 PF02464 Competence-damaged protein VAB027_3308 PF12857 TOBE-like domain VAB027_3308 PF00005 ABC transporter VAB027_3309 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_331 PF00248 Aldo/keto reductase family VAB027_3310 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_3312 PF00291 Pyridoxal-phosphate dependent enzyme VAB027_3315 PF00140 Sigma-70 factor, region 1.2 VAB027_3315 PF04542 Sigma-70 region 2 VAB027_3315 PF04545 Sigma-70, region 4 VAB027_3315 PF04539 Sigma-70 region 3 VAB027_3316 PF01551 Peptidase family M23 VAB027_3316 PF01476 LysM domain VAB027_3318 PF01975 Survival protein SurE VAB027_3319 PF01142 tRNA pseudouridine synthase D (TruD) VAB027_3320 PF02542 YgbB family VAB027_3321 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VAB027_3322 PF04977 Septum formation initiator VAB027_3323 PF02673 Bacitracin resistance protein BacA VAB027_3324 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAB027_3325 PF02152 Dihydroneopterin aldolase VAB027_3326 PF02660 Glycerol-3-phosphate acyltransferase VAB027_3327 PF00561 alpha/beta hydrolase fold VAB027_3328 PF00814 Glycoprotease family VAB027_3329 PF01165 Ribosomal protein S21 VAB027_333 PF00005 ABC transporter VAB027_3330 PF09424 Yqey-like protein VAB027_3331 PF08275 DNA primase catalytic core, N-terminal domain VAB027_3331 PF08278 DNA primase DnaG DnaB-binding VAB027_3331 PF10410 DnaB-helicase binding domain of primase VAB027_3331 PF01807 CHC2 zinc finger VAB027_3332 PF04542 Sigma-70 region 2 VAB027_3332 PF04545 Sigma-70, region 4 VAB027_3332 PF03979 Sigma-70 factor, region 1.1 VAB027_3332 PF00140 Sigma-70 factor, region 1.2 VAB027_3332 PF04546 Sigma-70, non-essential region VAB027_3332 PF04539 Sigma-70 region 3 VAB027_3335 PF03480 Bacterial extracellular solute-binding protein, family 7 VAB027_3336 PF01380 SIS domain VAB027_3337 PF00455 DeoR C terminal sensor domain VAB027_3337 PF08220 DeoR-like helix-turn-helix domain VAB027_3338 PF00224 Pyruvate kinase, barrel domain VAB027_3338 PF02887 Pyruvate kinase, alpha/beta domain VAB027_3339 PF01609 Transposase DDE domain VAB027_3339 PF14706 Transposase DNA-binding VAB027_3339 PF02281 Transposase Tn5 dimerisation domain VAB027_334 PF12704 MacB-like periplasmic core domain VAB027_334 PF02687 FtsX-like permease family VAB027_334 PF00005 ABC transporter VAB027_3341 PF04402 Protein of unknown function (DUF541) VAB027_3342 PF03466 LysR substrate binding domain VAB027_3342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3343 PF01810 LysE type translocator VAB027_3344 PF05552 Conserved TM helix VAB027_3344 PF00924 Mechanosensitive ion channel VAB027_3345 PF01116 Fructose-bisphosphate aldolase class-II VAB027_3346 PF00162 Phosphoglycerate kinase VAB027_3347 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_3347 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAB027_3348 PF07715 TonB-dependent Receptor Plug Domain VAB027_3348 PF00593 TonB dependent receptor VAB027_3349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3349 PF03466 LysR substrate binding domain VAB027_3350 PF00456 Transketolase, thiamine diphosphate binding domain VAB027_3350 PF02779 Transketolase, pyrimidine binding domain VAB027_3350 PF02780 Transketolase, C-terminal domain VAB027_3351 PF02772 S-adenosylmethionine synthetase, central domain VAB027_3351 PF02773 S-adenosylmethionine synthetase, C-terminal domain VAB027_3351 PF00438 S-adenosylmethionine synthetase, N-terminal domain VAB027_3352 PF10263 SprT-like family VAB027_3352 PF17283 SprT-like zinc ribbon domain VAB027_3353 PF04231 Endonuclease I VAB027_3354 PF04452 RNA methyltransferase VAB027_3355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VAB027_3355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VAB027_3356 PF02622 Uncharacterized ACR, COG1678 VAB027_3357 PF03652 Holliday junction resolvase VAB027_3358 PF01479 S4 domain VAB027_3358 PF00579 tRNA synthetases class I (W and Y) VAB027_3360 PF00437 Type II/IV secretion system protein VAB027_3361 PF00437 Type II/IV secretion system protein VAB027_3362 PF01168 Alanine racemase, N-terminal domain VAB027_3363 PF14748 Pyrroline-5-carboxylate reductase dimerisation VAB027_3363 PF03807 NADP oxidoreductase coenzyme F420-dependent VAB027_3364 PF02325 YGGT family VAB027_3365 PF02594 Uncharacterised ACR, YggU family COG1872 VAB027_3367 PF01725 Ham1 family VAB027_3368 PF06969 HemN C-terminal domain VAB027_3368 PF04055 Radical SAM superfamily VAB027_3369 PF04960 Glutaminase VAB027_337 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_337 PF07694 5TMR of 5TMR-LYT VAB027_337 PF13492 GAF domain VAB027_337 PF06580 Histidine kinase VAB027_3370 PF02390 Putative methyltransferase VAB027_3371 PF14815 NUDIX domain VAB027_3371 PF00730 HhH-GPD superfamily base excision DNA repair protein VAB027_3371 PF00633 Helix-hairpin-helix motif VAB027_3371 PF10576 Iron-sulfur binding domain of endonuclease III VAB027_3372 PF04362 Bacterial Fe(2+) trafficking VAB027_3373 PF01464 Transglycosylase SLT domain VAB027_3373 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VAB027_3378 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_3378 PF00672 HAMP domain VAB027_3378 PF12729 Four helix bundle sensory module for signal transduction VAB027_338 PF00072 Response regulator receiver domain VAB027_338 PF04397 LytTr DNA-binding domain VAB027_3384 PF00226 DnaJ domain VAB027_3384 PF05099 Tellurite resistance protein TerB VAB027_3385 PF04453 LPS transport system D VAB027_3385 PF03968 OstA-like protein VAB027_3386 PF09312 SurA N-terminal domain VAB027_3387 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VAB027_3388 PF00398 Ribosomal RNA adenine dimethylase VAB027_3389 PF04379 ApaG domain VAB027_3390 PF00149 Calcineurin-like phosphoesterase VAB027_3391 PF00186 Dihydrofolate reductase VAB027_3392 PF12821 Threonine/Serine exporter, ThrE VAB027_3393 PF06738 Putative threonine/serine exporter VAB027_3394 PF01018 GTP1/OBG VAB027_3394 PF01926 50S ribosome-binding GTPase VAB027_3395 PF01016 Ribosomal L27 protein VAB027_3396 PF00829 Ribosomal prokaryotic L21 protein VAB027_3397 PF00348 Polyprenyl synthetase VAB027_3398 PF13520 Amino acid permease VAB027_3399 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VAB027_3399 PF00056 lactate/malate dehydrogenase, NAD binding domain VAB027_34 PF01327 Polypeptide deformylase VAB027_340 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3400 PF01316 Arginine repressor, DNA binding domain VAB027_3400 PF02863 Arginine repressor, C-terminal domain VAB027_3401 PF16868 NMT1-like family VAB027_3403 PF00582 Universal stress protein family VAB027_3406 PF06877 Regulator of ribonuclease activity B VAB027_3408 PF01523 Putative modulator of DNA gyrase VAB027_3409 PF00795 Carbon-nitrogen hydrolase VAB027_341 PF13520 Amino acid permease VAB027_3410 PF13502 AsmA-like C-terminal region VAB027_3410 PF13116 Protein of unknown function VAB027_3411 PF10150 Ribonuclease E/G family VAB027_3411 PF00575 S1 RNA binding domain VAB027_3412 PF02545 Maf-like protein VAB027_3413 PF04093 rod shape-determining protein MreD VAB027_3414 PF04085 rod shape-determining protein MreC VAB027_342 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_3421 PF07963 Prokaryotic N-terminal methylation motif VAB027_3421 PF00114 Pilin (bacterial filament) VAB027_3422 PF00114 Pilin (bacterial filament) VAB027_3422 PF07963 Prokaryotic N-terminal methylation motif VAB027_3426 PF00437 Type II/IV secretion system protein VAB027_3428 PF13401 AAA domain VAB027_3428 PF01471 Putative peptidoglycan binding domain VAB027_3429 PF03958 Bacterial type II/III secretion system short domain VAB027_3429 PF00263 Bacterial type II and III secretion system protein VAB027_3433 PF00990 Diguanylate cyclase, GGDEF domain VAB027_3433 PF00563 EAL domain VAB027_3433 PF17157 Gammaproteobacterial periplasmic sensor domain VAB027_3434 PF00436 Single-strand binding protein family VAB027_3435 PF00196 Bacterial regulatory proteins, luxR family VAB027_3436 PF00483 Nucleotidyl transferase VAB027_3437 PF17755 UvrA DNA-binding domain VAB027_3437 PF00005 ABC transporter VAB027_3437 PF17760 UvrA interaction domain VAB027_3439 PF00266 Aminotransferase class-V VAB027_3440 PF00696 Amino acid kinase family VAB027_3440 PF01842 ACT domain VAB027_3441 PF02965 Vitamin B12 dependent methionine synthase, activation domain VAB027_3441 PF02607 B12 binding domain VAB027_3441 PF02310 B12 binding domain VAB027_3441 PF02574 Homocysteine S-methyltransferase VAB027_3441 PF00809 Pterin binding enzyme VAB027_3442 PF00999 Sodium/hydrogen exchanger family VAB027_3449 PF01507 Phosphoadenosine phosphosulfate reductase family VAB027_3450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VAB027_3450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VAB027_3451 PF00667 FAD binding domain VAB027_3451 PF00175 Oxidoreductase NAD-binding domain VAB027_3451 PF00258 Flavodoxin VAB027_3454 PF09583 Phage shock protein G (Phageshock_PspG) VAB027_3455 PF01207 Dihydrouridine synthase (Dus) VAB027_3456 PF01475 Ferric uptake regulator family VAB027_3458 PF12706 Beta-lactamase superfamily domain VAB027_3459 PF00342 Phosphoglucose isomerase VAB027_346 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAB027_346 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_3460 PF01894 Uncharacterised protein family UPF0047 VAB027_3461 PF00842 Alanine racemase, C-terminal domain VAB027_3461 PF01168 Alanine racemase, N-terminal domain VAB027_3462 PF03796 DnaB-like helicase C terminal domain VAB027_3462 PF00772 DnaB-like helicase N terminal domain VAB027_3464 PF01281 Ribosomal protein L9, N-terminal domain VAB027_3464 PF03948 Ribosomal protein L9, C-terminal domain VAB027_3465 PF01084 Ribosomal protein S18 VAB027_3466 PF00436 Single-strand binding protein family VAB027_3467 PF01250 Ribosomal protein S6 VAB027_3468 PF00210 Ferritin-like domain VAB027_3469 PF04324 BFD-like [2Fe-2S] binding domain VAB027_347 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAB027_3470 PF03143 Elongation factor Tu C-terminal domain VAB027_3470 PF03144 Elongation factor Tu domain 2 VAB027_3470 PF00009 Elongation factor Tu GTP binding domain VAB027_3471 PF00009 Elongation factor Tu GTP binding domain VAB027_3471 PF03764 Elongation factor G, domain IV VAB027_3471 PF14492 Elongation Factor G, domain II VAB027_3471 PF03144 Elongation factor Tu domain 2 VAB027_3471 PF00679 Elongation factor G C-terminus VAB027_3472 PF00177 Ribosomal protein S7p/S5e VAB027_3473 PF00164 Ribosomal protein S12/S23 VAB027_3475 PF02635 DsrE/DsrF-like family VAB027_3476 PF02635 DsrE/DsrF-like family VAB027_3477 PF13309 HTH domain VAB027_3477 PF08348 YheO-like PAS domain VAB027_3478 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAB027_3478 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAB027_348 PF02566 OsmC-like protein VAB027_3480 PF04102 SlyX VAB027_3481 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VAB027_3482 PF01145 SPFH domain / Band 7 family VAB027_3483 PF12221 Bacterial membrane protein N terminal VAB027_3483 PF01145 SPFH domain / Band 7 family VAB027_3484 PF01926 50S ribosome-binding GTPase VAB027_3484 PF16360 GTP-binding GTPase Middle Region VAB027_3484 PF13167 GTP-binding GTPase N-terminal VAB027_3485 PF17209 Hfq protein VAB027_3487 PF08676 MutL C terminal dimerisation domain VAB027_3487 PF01119 DNA mismatch repair protein, C-terminal domain VAB027_3488 PF01520 N-acetylmuramoyl-L-alanine amidase VAB027_3489 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VAB027_349 PF03471 Transporter associated domain VAB027_349 PF00571 CBS domain VAB027_349 PF01595 Cyclin M transmembrane N-terminal domain VAB027_3490 PF08331 Domain of unknown function (DUF1730) VAB027_35 PF01476 LysM domain VAB027_350 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VAB027_350 PF14602 Hexapeptide repeat of succinyl-transferase VAB027_350 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_3500 PF00929 Exonuclease VAB027_3501 PF03193 RsgA GTPase VAB027_3502 PF02666 Phosphatidylserine decarboxylase VAB027_3503 PF00939 Sodium:sulfate symporter transmembrane region VAB027_3505 PF01676 Metalloenzyme superfamily VAB027_3505 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VAB027_3507 PF01551 Peptidase family M23 VAB027_3508 PF00440 Bacterial regulatory proteins, tetR family VAB027_3508 PF08360 QacR-like protein, C-terminal region VAB027_3509 PF01208 Uroporphyrinogen decarboxylase (URO-D) VAB027_351 PF00892 EamA-like transporter family VAB027_3510 PF00293 NUDIX domain VAB027_3510 PF09297 NADH pyrophosphatase zinc ribbon domain VAB027_3511 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VAB027_3512 PF01609 Transposase DDE domain VAB027_3512 PF13006 Insertion element 4 transposase N-terminal VAB027_3513 PF04997 RNA polymerase Rpb1, domain 1 VAB027_3513 PF04998 RNA polymerase Rpb1, domain 5 VAB027_3513 PF05000 RNA polymerase Rpb1, domain 4 VAB027_3513 PF04983 RNA polymerase Rpb1, domain 3 VAB027_3513 PF00623 RNA polymerase Rpb1, domain 2 VAB027_3514 PF04561 RNA polymerase Rpb2, domain 2 VAB027_3514 PF04563 RNA polymerase beta subunit VAB027_3514 PF10385 RNA polymerase beta subunit external 1 domain VAB027_3514 PF04565 RNA polymerase Rpb2, domain 3 VAB027_3514 PF00562 RNA polymerase Rpb2, domain 6 VAB027_3514 PF04560 RNA polymerase Rpb2, domain 7 VAB027_3515 PF16320 Ribosomal protein L7/L12 dimerisation domain VAB027_3515 PF00542 Ribosomal protein L7/L12 C-terminal domain VAB027_3516 PF00466 Ribosomal protein L10 VAB027_3517 PF00687 Ribosomal protein L1p/L10e family VAB027_3518 PF00298 Ribosomal protein L11, RNA binding domain VAB027_3518 PF03946 Ribosomal protein L11, N-terminal domain VAB027_3519 PF02357 Transcription termination factor nusG VAB027_3519 PF00467 KOW motif VAB027_3520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VAB027_3521 PF03143 Elongation factor Tu C-terminal domain VAB027_3521 PF03144 Elongation factor Tu domain 2 VAB027_3521 PF00009 Elongation factor Tu GTP binding domain VAB027_3526 PF00485 Phosphoribulokinase / Uridine kinase family VAB027_3527 PF03099 Biotin/lipoate A/B protein ligase family VAB027_3527 PF02237 Biotin protein ligase C terminal domain VAB027_3527 PF08279 HTH domain VAB027_3528 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VAB027_3528 PF01565 FAD binding domain VAB027_353 PF03466 LysR substrate binding domain VAB027_353 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3530 PF13091 PLD-like domain VAB027_3536 PF00175 Oxidoreductase NAD-binding domain VAB027_3537 PF00970 Oxidoreductase FAD-binding domain VAB027_3537 PF00111 2Fe-2S iron-sulfur cluster binding domain VAB027_3537 PF00175 Oxidoreductase NAD-binding domain VAB027_3538 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VAB027_3540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAB027_3540 PF07498 Rho termination factor, N-terminal domain VAB027_3540 PF07497 Rho termination factor, RNA-binding domain VAB027_3541 PF00085 Thioredoxin VAB027_3542 PF00271 Helicase conserved C-terminal domain VAB027_3542 PF00270 DEAD/DEAH box helicase VAB027_3543 PF02541 Ppx/GppA phosphatase family VAB027_3544 PF00512 His Kinase A (phospho-acceptor) domain VAB027_3544 PF09456 RcsC Alpha-Beta-Loop (ABL) VAB027_3544 PF00072 Response regulator receiver domain VAB027_3544 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_3545 PF12832 MFS_1 like family VAB027_3548 PF16177 Acetyl-coenzyme A synthetase N-terminus VAB027_3548 PF00501 AMP-binding enzyme VAB027_3548 PF13193 AMP-binding enzyme C-terminal domain VAB027_3549 PF01220 Dehydroquinase class II VAB027_3550 PF00364 Biotin-requiring enzyme VAB027_3551 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAB027_3551 PF02785 Biotin carboxylase C-terminal domain VAB027_3551 PF00289 Biotin carboxylase, N-terminal domain VAB027_3553 PF01207 Dihydrouridine synthase (Dus) VAB027_3554 PF02954 Bacterial regulatory protein, Fis family VAB027_3557 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAB027_3557 PF00356 Bacterial regulatory proteins, lacI family VAB027_3558 PF00920 Dehydratase family VAB027_3559 PF01202 Shikimate kinase VAB027_3560 PF02447 GntP family permease VAB027_3561 PF01081 KDPG and KHG aldolase VAB027_3562 PF07715 TonB-dependent Receptor Plug Domain VAB027_3562 PF00593 TonB dependent receptor VAB027_3564 PF00672 HAMP domain VAB027_3564 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_3564 PF17200 Single Cache domain 2 VAB027_3565 PF01276 Orn/Lys/Arg decarboxylase, major domain VAB027_3565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VAB027_3565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VAB027_3566 PF13520 Amino acid permease VAB027_3567 PF18500 CadC C-terminal domain 1 VAB027_3567 PF00486 Transcriptional regulatory protein, C terminal VAB027_3568 PF13411 MerR HTH family regulatory protein VAB027_3569 PF02142 MGS-like domain VAB027_3569 PF01808 AICARFT/IMPCHase bienzyme VAB027_357 PF13193 AMP-binding enzyme C-terminal domain VAB027_357 PF00501 AMP-binding enzyme VAB027_3570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VAB027_3570 PF02843 Phosphoribosylglycinamide synthetase, C domain VAB027_3570 PF02844 Phosphoribosylglycinamide synthetase, N domain VAB027_3572 PF00216 Bacterial DNA-binding protein VAB027_3573 PF01595 Cyclin M transmembrane N-terminal domain VAB027_3573 PF00571 CBS domain VAB027_3578 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VAB027_358 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VAB027_3580 PF06082 Exopolysaccharide biosynthesis protein YbjH VAB027_3581 PF04222 Protein of unknown function (DUF416) VAB027_3582 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAB027_3583 PF03167 Uracil DNA glycosylase superfamily VAB027_3584 PF00924 Mechanosensitive ion channel VAB027_3585 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VAB027_3585 PF00753 Metallo-beta-lactamase superfamily VAB027_3585 PF10996 Beta-Casp domain VAB027_3586 PF02719 Polysaccharide biosynthesis protein VAB027_3587 PF02397 Bacterial sugar transferase VAB027_3588 PF01370 NAD dependent epimerase/dehydratase family VAB027_3589 PF13579 Glycosyl transferase 4-like domain VAB027_359 PF01329 Pterin 4 alpha carbinolamine dehydratase VAB027_3590 PF02350 UDP-N-acetylglucosamine 2-epimerase VAB027_3591 PF01370 NAD dependent epimerase/dehydratase family VAB027_3592 PF02719 Polysaccharide biosynthesis protein VAB027_3592 PF08485 Polysaccharide biosynthesis protein C-terminal VAB027_3593 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_3598 PF02348 Cytidylyltransferase VAB027_3599 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAB027_3599 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAB027_36 PF02481 DNA recombination-mediator protein A VAB027_36 PF17782 DprA winged helix domain VAB027_360 PF00583 Acetyltransferase (GNAT) family VAB027_3600 PF00483 Nucleotidyl transferase VAB027_3602 PF08666 SAF domain VAB027_3602 PF03102 NeuB family VAB027_3603 PF02350 UDP-N-acetylglucosamine 2-epimerase VAB027_3604 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAB027_3605 PF02719 Polysaccharide biosynthesis protein VAB027_3606 PF13808 DDE_Tnp_1-associated VAB027_3606 PF01609 Transposase DDE domain VAB027_3607 PF13737 Transposase DDE domain VAB027_3608 PF13737 Transposase DDE domain VAB027_3609 PF02706 Chain length determinant protein VAB027_361 PF00202 Aminotransferase class-III VAB027_3610 PF01370 NAD dependent epimerase/dehydratase family VAB027_3611 PF00457 Glycosyl hydrolases family 11 VAB027_3611 PF01522 Polysaccharide deacetylase VAB027_3612 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_3615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAB027_3616 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VAB027_3617 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VAB027_362 PF06339 Ectoine synthase VAB027_3622 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_3623 PF01757 Acyltransferase family VAB027_3625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAB027_3626 PF00535 Glycosyl transferase family 2 VAB027_3627 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAB027_3628 PF01467 Cytidylyltransferase-like VAB027_3629 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VAB027_3629 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VAB027_3629 PF06827 Zinc finger found in FPG and IleRS VAB027_363 PF13840 ACT domain VAB027_363 PF00696 Amino acid kinase family VAB027_3631 PF00471 Ribosomal protein L33 VAB027_3632 PF00830 Ribosomal L28 family VAB027_3633 PF04002 RadC-like JAB domain VAB027_3634 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_3634 PF00672 HAMP domain VAB027_3634 PF02743 Cache domain VAB027_3635 PF02441 Flavoprotein VAB027_3635 PF04127 DNA / pantothenate metabolism flavoprotein VAB027_3636 PF00440 Bacterial regulatory proteins, tetR family VAB027_3637 PF03279 Bacterial lipid A biosynthesis acyltransferase VAB027_3638 PF03279 Bacterial lipid A biosynthesis acyltransferase VAB027_3639 PF00156 Phosphoribosyl transferase domain VAB027_3640 PF03725 3' exoribonuclease family, domain 2 VAB027_3640 PF01138 3' exoribonuclease family, domain 1 VAB027_3641 PF08340 Domain of unknown function (DUF1732) VAB027_3641 PF03755 YicC-like family, N-terminal region VAB027_365 PF00118 TCP-1/cpn60 chaperonin family VAB027_3652 PF02384 N-6 DNA Methylase VAB027_3652 PF12161 HsdM N-terminal domain VAB027_3653 PF01420 Type I restriction modification DNA specificity domain VAB027_3655 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VAB027_3655 PF18766 SWI2/SNF2 ATPase VAB027_3655 PF12008 Type I restriction and modification enzyme - subunit R C terminal VAB027_366 PF00166 Chaperonin 10 Kd subunit VAB027_3663 PF03350 Uncharacterized protein family, UPF0114 VAB027_3664 PF02378 Phosphotransferase system, EIIC VAB027_3664 PF00367 phosphotransferase system, EIIB VAB027_3665 PF13580 SIS domain VAB027_3666 PF01380 SIS domain VAB027_3666 PF01418 Helix-turn-helix domain, rpiR family VAB027_3667 PF01032 FecCD transport family VAB027_3668 PF01497 Periplasmic binding protein VAB027_3669 PF00005 ABC transporter VAB027_367 PF03448 MgtE intracellular N domain VAB027_367 PF00571 CBS domain VAB027_367 PF01769 Divalent cation transporter VAB027_3670 PF07715 TonB-dependent Receptor Plug Domain VAB027_3670 PF00593 TonB dependent receptor VAB027_3671 PF00005 ABC transporter VAB027_3671 PF00664 ABC transporter transmembrane region VAB027_3674 PF00570 HRDC domain VAB027_3674 PF00270 DEAD/DEAH box helicase VAB027_3674 PF16124 RecQ zinc-binding VAB027_3674 PF09382 RQC domain VAB027_3674 PF00271 Helicase conserved C-terminal domain VAB027_3675 PF00892 EamA-like transporter family VAB027_3677 PF12833 Helix-turn-helix domain VAB027_3678 PF01810 LysE type translocator VAB027_3679 PF00580 UvrD/REP helicase N-terminal domain VAB027_3679 PF13361 UvrD-like helicase C-terminal domain VAB027_3680 PF01432 Peptidase family M3 VAB027_3681 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VAB027_3682 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAB027_3682 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_3684 PF12911 N-terminal TM domain of oligopeptide transport permease C VAB027_3684 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_3686 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAB027_3687 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_3687 PF00005 ABC transporter VAB027_369 PF17810 Arginine decarboxylase helical bundle domain VAB027_369 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VAB027_369 PF17944 Arginine decarboxylase C-terminal helical extension VAB027_3693 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAB027_3694 PF13361 UvrD-like helicase C-terminal domain VAB027_3694 PF00580 UvrD/REP helicase N-terminal domain VAB027_3695 PF00440 Bacterial regulatory proteins, tetR family VAB027_3696 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAB027_3697 PF00873 AcrB/AcrD/AcrF family VAB027_3698 PF04380 Membrane fusogenic activity VAB027_3699 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VAB027_3699 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VAB027_37 PF04361 Protein of unknown function (DUF494) VAB027_370 PF00491 Arginase family VAB027_3700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3700 PF03466 LysR substrate binding domain VAB027_3709 PF12724 Flavodoxin domain VAB027_371 PF04389 Peptidase family M28 VAB027_371 PF04151 Bacterial pre-peptidase C-terminal domain VAB027_3710 PF02386 Cation transport protein VAB027_3711 PF09186 Domain of unknown function (DUF1949) VAB027_3711 PF01205 Uncharacterized protein family UPF0029 VAB027_3712 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAB027_3712 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAB027_3712 PF00378 Enoyl-CoA hydratase/isomerase VAB027_3713 PF02803 Thiolase, C-terminal domain VAB027_3713 PF00108 Thiolase, N-terminal domain VAB027_3714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_3714 PF03466 LysR substrate binding domain VAB027_3715 PF07690 Major Facilitator Superfamily VAB027_3716 PF12804 MobA-like NTP transferase domain VAB027_3716 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_3717 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VAB027_3717 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VAB027_3718 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAB027_3718 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAB027_3719 PF00231 ATP synthase VAB027_372 PF07504 Fungalysin/Thermolysin Propeptide Motif VAB027_372 PF03413 Peptidase propeptide and YPEB domain VAB027_372 PF01447 Thermolysin metallopeptidase, catalytic domain VAB027_372 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAB027_372 PF04151 Bacterial pre-peptidase C-terminal domain VAB027_3720 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAB027_3720 PF00306 ATP synthase alpha/beta chain, C terminal domain VAB027_3720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAB027_3721 PF00213 ATP synthase delta (OSCP) subunit VAB027_3722 PF00430 ATP synthase B/B' CF(0) VAB027_3723 PF00137 ATP synthase subunit C VAB027_3724 PF00119 ATP synthase A chain VAB027_3725 PF03899 ATP synthase I chain VAB027_3726 PF17762 HTH domain found in ParB protein VAB027_3726 PF02195 ParB-like nuclease domain VAB027_3727 PF13614 AAA domain VAB027_3728 PF02527 rRNA small subunit methyltransferase G VAB027_3729 PF01134 Glucose inhibited division protein A VAB027_3729 PF13932 GidA associated domain VAB027_373 PF18416 N-acetylglucosamine binding protein domain 2 VAB027_373 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VAB027_3730 PF00258 Flavodoxin VAB027_3732 PF00239 Resolvase, N terminal domain VAB027_3732 PF02796 Helix-turn-helix domain of resolvase VAB027_3733 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_374 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VAB027_3749 PF06122 Conjugative relaxosome accessory transposon protein VAB027_375 PF01575 MaoC like domain VAB027_3758 PF02899 Phage integrase, N-terminal SAM-like domain VAB027_3758 PF00589 Phage integrase family VAB027_376 PF12849 PBP superfamily domain VAB027_3760 PF01926 50S ribosome-binding GTPase VAB027_3760 PF10396 GTP-binding protein TrmE N-terminus VAB027_3760 PF12631 MnmE helical domain VAB027_3761 PF14849 YidC periplasmic domain VAB027_3761 PF02096 60Kd inner membrane protein VAB027_3762 PF00825 Ribonuclease P VAB027_3763 PF00005 ABC transporter VAB027_3764 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_3765 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_378 PF08206 Ribonuclease B OB domain VAB027_378 PF00773 RNB domain VAB027_378 PF00575 S1 RNA binding domain VAB027_379 PF03880 DbpA RNA binding domain VAB027_379 PF00270 DEAD/DEAH box helicase VAB027_379 PF00271 Helicase conserved C-terminal domain VAB027_38 PF01396 Topoisomerase DNA binding C4 zinc finger VAB027_381 PF00884 Sulfatase VAB027_382 PF00294 pfkB family carbohydrate kinase VAB027_385 PF13419 Haloacid dehalogenase-like hydrolase VAB027_389 PF00684 DnaJ central domain VAB027_389 PF01556 DnaJ C terminal domain VAB027_389 PF00226 DnaJ domain VAB027_39 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VAB027_39 PF02222 ATP-grasp domain VAB027_393 PF07055 Enoyl reductase FAD binding domain VAB027_393 PF12241 Trans-2-enoyl-CoA reductase catalytic region VAB027_393 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VAB027_394 PF13472 GDSL-like Lipase/Acylhydrolase family VAB027_395 PF00005 ABC transporter VAB027_397 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAB027_397 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAB027_399 PF02626 Carboxyltransferase domain, subdomain A and B VAB027_4 PF00204 DNA gyrase B VAB027_4 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_4 PF01751 Toprim domain VAB027_4 PF00986 DNA gyrase B subunit, carboxyl terminus VAB027_4 PF18053 DNA gyrase B subunit insert domain VAB027_40 PF00731 AIR carboxylase VAB027_401 PF03746 LamB/YcsF family VAB027_402 PF16363 GDP-mannose 4,6 dehydratase VAB027_403 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_403 PF00672 HAMP domain VAB027_404 PF03222 Tryptophan/tyrosine permease family VAB027_406 PF04336 Acyl carrier protein phosphodiesterase VAB027_407 PF00271 Helicase conserved C-terminal domain VAB027_407 PF00270 DEAD/DEAH box helicase VAB027_408 PF08361 MAATS-type transcriptional repressor, C-terminal region VAB027_408 PF00440 Bacterial regulatory proteins, tetR family VAB027_409 PF00034 Cytochrome c VAB027_41 PF01300 Telomere recombination VAB027_412 PF00293 NUDIX domain VAB027_415 PF05762 VWA domain containing CoxE-like protein VAB027_417 PF00005 ABC transporter VAB027_418 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_419 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_42 PF01218 Coproporphyrinogen III oxidase VAB027_420 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_421 PF03466 LysR substrate binding domain VAB027_421 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_426 PF07690 Major Facilitator Superfamily VAB027_427 PF00085 Thioredoxin VAB027_428 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAB027_428 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAB027_429 PF13183 4Fe-4S dicluster domain VAB027_429 PF02754 Cysteine-rich domain VAB027_43 PF08501 Shikimate dehydrogenase substrate binding domain VAB027_43 PF01488 Shikimate / quinate 5-dehydrogenase VAB027_43 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VAB027_430 PF00890 FAD binding domain VAB027_431 PF01266 FAD dependent oxidoreductase VAB027_431 PF04324 BFD-like [2Fe-2S] binding domain VAB027_432 PF00230 Major intrinsic protein VAB027_433 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VAB027_433 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VAB027_436 PF04363 Protein of unknown function (DUF496) VAB027_438 PF04337 Protein of unknown function, DUF480 VAB027_439 PF01541 GIY-YIG catalytic domain VAB027_44 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_441 PF13407 Periplasmic binding protein domain VAB027_443 PF09308 LuxQ, periplasmic VAB027_443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_443 PF00512 His Kinase A (phospho-acceptor) domain VAB027_443 PF00072 Response regulator receiver domain VAB027_449 PF03266 NTPase VAB027_450 PF01609 Transposase DDE domain VAB027_450 PF13006 Insertion element 4 transposase N-terminal VAB027_452 PF02281 Transposase Tn5 dimerisation domain VAB027_452 PF14706 Transposase DNA-binding VAB027_452 PF01609 Transposase DDE domain VAB027_453 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAB027_453 PF07685 CobB/CobQ-like glutamine amidotransferase domain VAB027_455 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_456 PF00005 ABC transporter VAB027_456 PF03459 TOBE domain VAB027_461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_461 PF08448 PAS fold VAB027_461 PF13188 PAS domain VAB027_461 PF00072 Response regulator receiver domain VAB027_461 PF00512 His Kinase A (phospho-acceptor) domain VAB027_462 PF12805 FUSC-like inner membrane protein yccS VAB027_463 PF12462 DNA helicase IV / RNA helicase N terminal VAB027_463 PF00580 UvrD/REP helicase N-terminal domain VAB027_463 PF13361 UvrD-like helicase C-terminal domain VAB027_464 PF01219 Prokaryotic diacylglycerol kinase VAB027_465 PF00857 Isochorismatase family VAB027_466 PF02142 MGS-like domain VAB027_467 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAB027_468 PF00672 HAMP domain VAB027_468 PF00072 Response regulator receiver domain VAB027_468 PF00512 His Kinase A (phospho-acceptor) domain VAB027_468 PF01627 Hpt domain VAB027_468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_469 PF00224 Pyruvate kinase, barrel domain VAB027_469 PF02887 Pyruvate kinase, alpha/beta domain VAB027_470 PF07690 Major Facilitator Superfamily VAB027_472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_472 PF02743 Cache domain VAB027_472 PF00512 His Kinase A (phospho-acceptor) domain VAB027_474 PF00072 Response regulator receiver domain VAB027_474 PF14532 Sigma-54 interaction domain VAB027_474 PF02954 Bacterial regulatory protein, Fis family VAB027_475 PF00465 Iron-containing alcohol dehydrogenase VAB027_476 PF00704 Glycosyl hydrolases family 18 VAB027_476 PF06483 Chitinase C VAB027_477 PF00483 Nucleotidyl transferase VAB027_478 PF00990 Diguanylate cyclase, GGDEF domain VAB027_478 PF17158 Membrane-associated sensor, integral membrane domain VAB027_481 PF02355 Protein export membrane protein VAB027_481 PF07549 SecD/SecF GG Motif VAB027_481 PF13721 SecD export protein N-terminal TM region VAB027_482 PF07549 SecD/SecF GG Motif VAB027_482 PF02355 Protein export membrane protein VAB027_483 PF00106 short chain dehydrogenase VAB027_484 PF02803 Thiolase, C-terminal domain VAB027_484 PF00108 Thiolase, N-terminal domain VAB027_486 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VAB027_487 PF01966 HD domain VAB027_489 PF03264 NapC/NirT cytochrome c family, N-terminal region VAB027_490 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VAB027_491 PF00384 Molybdopterin oxidoreductase VAB027_491 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAB027_491 PF01568 Molydopterin dinucleotide binding domain VAB027_493 PF12838 4Fe-4S dicluster domain VAB027_493 PF13187 4Fe-4S dicluster domain VAB027_494 PF00672 HAMP domain VAB027_494 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VAB027_494 PF07730 Histidine kinase VAB027_494 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_495 PF00196 Bacterial regulatory proteins, luxR family VAB027_495 PF00072 Response regulator receiver domain VAB027_496 PF00356 Bacterial regulatory proteins, lacI family VAB027_500 PF00474 Sodium:solute symporter family VAB027_503 PF03606 C4-dicarboxylate anaerobic carrier VAB027_504 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_504 PF12729 Four helix bundle sensory module for signal transduction VAB027_504 PF00672 HAMP domain VAB027_505 PF13419 Haloacid dehalogenase-like hydrolase VAB027_506 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAB027_506 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAB027_507 PF13488 Glycine zipper VAB027_507 PF00691 OmpA family VAB027_508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_508 PF00672 HAMP domain VAB027_509 PF01266 FAD dependent oxidoreductase VAB027_509 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VAB027_510 PF00294 pfkB family carbohydrate kinase VAB027_511 PF08244 Glycosyl hydrolases family 32 C terminal VAB027_511 PF00251 Glycosyl hydrolases family 32 N-terminal domain VAB027_513 PF02378 Phosphotransferase system, EIIC VAB027_513 PF00367 phosphotransferase system, EIIB VAB027_52 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VAB027_522 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAB027_522 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAB027_525 PF04143 Sulphur transport VAB027_528 PF00873 AcrB/AcrD/AcrF family VAB027_529 PF00881 Nitroreductase family VAB027_53 PF01964 Radical SAM ThiC family VAB027_53 PF13667 ThiC-associated domain VAB027_530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_530 PF03466 LysR substrate binding domain VAB027_531 PF03992 Antibiotic biosynthesis monooxygenase VAB027_533 PF06942 GlpM protein VAB027_536 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAB027_536 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAB027_538 PF02463 RecF/RecN/SMC N terminal domain VAB027_54 PF02581 Thiamine monophosphate synthase VAB027_540 PF01609 Transposase DDE domain VAB027_540 PF14706 Transposase DNA-binding VAB027_540 PF02281 Transposase Tn5 dimerisation domain VAB027_543 PF02779 Transketolase, pyrimidine binding domain VAB027_543 PF00456 Transketolase, thiamine diphosphate binding domain VAB027_543 PF02780 Transketolase, C-terminal domain VAB027_544 PF00923 Transaldolase/Fructose-6-phosphate aldolase VAB027_545 PF04198 Putative sugar-binding domain VAB027_546 PF00581 Rhodanese-like domain VAB027_548 PF00899 ThiF family VAB027_549 PF00994 Probable molybdopterin binding domain VAB027_549 PF03454 MoeA C-terminal region (domain IV) VAB027_549 PF03453 MoeA N-terminal region (domain I and II) VAB027_55 PF00899 ThiF family VAB027_550 PF01227 GTP cyclohydrolase I VAB027_551 PF01641 SelR domain VAB027_551 PF01625 Peptide methionine sulfoxide reductase VAB027_552 PF01268 Formate--tetrahydrofolate ligase VAB027_553 PF01741 Large-conductance mechanosensitive channel, MscL VAB027_556 PF13419 Haloacid dehalogenase-like hydrolase VAB027_557 PF14760 Rnk N-terminus VAB027_557 PF01272 Transcription elongation factor, GreA/GreB, C-term VAB027_558 PF13419 Haloacid dehalogenase-like hydrolase VAB027_56 PF02597 ThiS family VAB027_560 PF00266 Aminotransferase class-V VAB027_562 PF01609 Transposase DDE domain VAB027_562 PF02281 Transposase Tn5 dimerisation domain VAB027_562 PF14706 Transposase DNA-binding VAB027_563 PF00005 ABC transporter VAB027_564 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_565 PF07702 UTRA domain VAB027_565 PF00392 Bacterial regulatory proteins, gntR family VAB027_567 PF00854 POT family VAB027_57 PF05690 Thiazole biosynthesis protein ThiG VAB027_572 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAB027_573 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_574 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_574 PF12911 N-terminal TM domain of oligopeptide transport permease C VAB027_575 PF00005 ABC transporter VAB027_575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAB027_576 PF12804 MobA-like NTP transferase domain VAB027_576 PF03479 Plants and Prokaryotes Conserved (PCC) domain VAB027_576 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_579 PF02798 Glutathione S-transferase, N-terminal domain VAB027_579 PF00043 Glutathione S-transferase, C-terminal domain VAB027_58 PF04055 Radical SAM superfamily VAB027_58 PF06968 Biotin and Thiamin Synthesis associated domain VAB027_583 PF03061 Thioesterase superfamily VAB027_585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAB027_585 PF12793 Sugar transport-related sRNA regulator N-term VAB027_586 PF07715 TonB-dependent Receptor Plug Domain VAB027_586 PF00593 TonB dependent receptor VAB027_587 PF03466 LysR substrate binding domain VAB027_587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_588 PF00583 Acetyltransferase (GNAT) family VAB027_588 PF13380 CoA binding domain VAB027_588 PF13607 Succinyl-CoA ligase like flavodoxin domain VAB027_59 PF00557 Metallopeptidase family M24 VAB027_59 PF01321 Creatinase/Prolidase N-terminal domain VAB027_59 PF00557 Metallopeptidase family M24 VAB027_59 PF01321 Creatinase/Prolidase N-terminal domain VAB027_590 PF01820 D-ala D-ala ligase N-terminus VAB027_590 PF07478 D-ala D-ala ligase C-terminus VAB027_592 PF01253 Translation initiation factor SUI1 VAB027_593 PF01797 Transposase IS200 like VAB027_594 PF03701 Uncharacterised protein family (UPF0181) VAB027_597 PF00072 Response regulator receiver domain VAB027_597 PF00486 Transcriptional regulatory protein, C terminal VAB027_599 PF02233 NAD(P) transhydrogenase beta subunit VAB027_60 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_60 PF03466 LysR substrate binding domain VAB027_600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VAB027_600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VAB027_600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VAB027_604 PF00990 Diguanylate cyclase, GGDEF domain VAB027_604 PF05230 MASE2 domain VAB027_607 PF00990 Diguanylate cyclase, GGDEF domain VAB027_607 PF17151 Periplasmic sensor domain VAB027_61 PF07690 Major Facilitator Superfamily VAB027_613 PF08274 PhnA Zinc-Ribbon VAB027_613 PF03831 PhnA domain VAB027_615 PF03741 Integral membrane protein TerC family VAB027_616 PF02872 5'-nucleotidase, C-terminal domain VAB027_616 PF00149 Calcineurin-like phosphoesterase VAB027_617 PF11398 Protein of unknown function (DUF2813) VAB027_618 PF06496 Protein of unknown function (DUF1097) VAB027_619 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_619 PF03466 LysR substrate binding domain VAB027_620 PF01226 Formate/nitrite transporter VAB027_621 PF04264 YceI-like domain VAB027_622 PF01292 Prokaryotic cytochrome b561 VAB027_624 PF10388 EAL-domain associated signalling protein domain VAB027_624 PF00563 EAL domain VAB027_626 PF09335 SNARE associated Golgi protein VAB027_627 PF02416 mttA/Hcf106 family VAB027_628 PF00072 Response regulator receiver domain VAB027_628 PF00486 Transcriptional regulatory protein, C terminal VAB027_629 PF02702 Osmosensitive K+ channel His kinase sensor domain VAB027_629 PF00512 His Kinase A (phospho-acceptor) domain VAB027_629 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_629 PF13493 Domain of unknown function (DUF4118) VAB027_63 PF01037 Lrp/AsnC ligand binding domain VAB027_630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAB027_630 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VAB027_630 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VAB027_630 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VAB027_630 PF10371 Domain of unknown function VAB027_631 PF02705 K+ potassium transporter VAB027_632 PF01926 50S ribosome-binding GTPase VAB027_633 PF07683 Cobalamin synthesis protein cobW C-terminal domain VAB027_633 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAB027_634 PF00654 Voltage gated chloride channel VAB027_636 PF00155 Aminotransferase class I and II VAB027_637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_637 PF00072 Response regulator receiver domain VAB027_638 PF13476 AAA domain VAB027_639 PF00149 Calcineurin-like phosphoesterase VAB027_639 PF12320 Type 5 capsule protein repressor C-terminal domain VAB027_64 PF08448 PAS fold VAB027_64 PF00563 EAL domain VAB027_64 PF00990 Diguanylate cyclase, GGDEF domain VAB027_640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAB027_640 PF00356 Bacterial regulatory proteins, lacI family VAB027_641 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAB027_641 PF00381 PTS HPr component phosphorylation site VAB027_642 PF00294 pfkB family carbohydrate kinase VAB027_643 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAB027_643 PF02378 Phosphotransferase system, EIIC VAB027_644 PF18030 RimK PreATP-grasp domain VAB027_644 PF08443 RimK-like ATP-grasp domain VAB027_645 PF00155 Aminotransferase class I and II VAB027_647 PF13597 Anaerobic ribonucleoside-triphosphate reductase VAB027_647 PF03477 ATP cone domain VAB027_65 PF04445 Putative SAM-dependent methyltransferase VAB027_653 PF13737 Transposase DDE domain VAB027_656 PF13737 Transposase DDE domain VAB027_658 PF02016 LD-carboxypeptidase N-terminal domain VAB027_658 PF17676 LD-carboxypeptidase C-terminal domain VAB027_666 PF00132 Bacterial transferase hexapeptide (six repeats) VAB027_67 PF00892 EamA-like transporter family VAB027_670 PF13302 Acetyltransferase (GNAT) domain VAB027_672 PF13737 Transposase DDE domain VAB027_674 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system VAB027_675 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VAB027_678 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_68 PF00582 Universal stress protein family VAB027_682 PF13737 Transposase DDE domain VAB027_69 PF00210 Ferritin-like domain VAB027_696 PF00293 NUDIX domain VAB027_698 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VAB027_7 PF00011 Hsp20/alpha crystallin family VAB027_70 PF10625 Universal stress protein B (UspB) VAB027_705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_717 PF00583 Acetyltransferase (GNAT) family VAB027_720 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA VAB027_721 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system VAB027_723 PF17676 LD-carboxypeptidase C-terminal domain VAB027_723 PF02016 LD-carboxypeptidase N-terminal domain VAB027_725 PF13737 Transposase DDE domain VAB027_727 PF04229 GrpB protein VAB027_73 PF02646 RmuC family VAB027_732 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ VAB027_735 PF13419 Haloacid dehalogenase-like hydrolase VAB027_736 PF13302 Acetyltransferase (GNAT) domain VAB027_738 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VAB027_739 PF01381 Helix-turn-helix VAB027_74 PF01209 ubiE/COQ5 methyltransferase family VAB027_740 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB VAB027_75 PF02036 SCP-2 sterol transfer family VAB027_750 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VAB027_755 PF13302 Acetyltransferase (GNAT) domain VAB027_756 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VAB027_759 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAB027_76 PF03109 ABC1 family VAB027_768 PF13495 Phage integrase, N-terminal SAM-like domain VAB027_768 PF00589 Phage integrase family VAB027_769 PF00453 Ribosomal protein L20 VAB027_77 PF02416 mttA/Hcf106 family VAB027_770 PF01632 Ribosomal protein L35 VAB027_771 PF05198 Translation initiation factor IF-3, N-terminal domain VAB027_771 PF00707 Translation initiation factor IF-3, C-terminal domain VAB027_772 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAB027_772 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAB027_772 PF03129 Anticodon binding domain VAB027_772 PF02824 TGS domain VAB027_773 PF01571 Aminomethyltransferase folate-binding domain VAB027_773 PF08669 Glycine cleavage T-protein C-terminal barrel domain VAB027_775 PF00464 Serine hydroxymethyltransferase VAB027_776 PF01597 Glycine cleavage H-protein VAB027_777 PF02347 Glycine cleavage system P-protein VAB027_779 PF00194 Eukaryotic-type carbonic anhydrase VAB027_78 PF02416 mttA/Hcf106 family VAB027_782 PF07943 Penicillin-binding protein 5, C-terminal domain VAB027_782 PF00768 D-alanyl-D-alanine carboxypeptidase VAB027_784 PF00672 HAMP domain VAB027_784 PF02743 Cache domain VAB027_784 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_786 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_786 PF03466 LysR substrate binding domain VAB027_79 PF00902 Sec-independent protein translocase protein (TatC) VAB027_794 PF00672 HAMP domain VAB027_794 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_794 PF00512 His Kinase A (phospho-acceptor) domain VAB027_795 PF00072 Response regulator receiver domain VAB027_795 PF00486 Transcriptional regulatory protein, C terminal VAB027_8 PF00155 Aminotransferase class I and II VAB027_80 PF03150 Di-haem cytochrome c peroxidase VAB027_80 PF00034 Cytochrome c VAB027_800 PF00455 DeoR C terminal sensor domain VAB027_800 PF08220 DeoR-like helix-turn-helix domain VAB027_801 PF03611 PTS system sugar-specific permease component VAB027_802 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAB027_803 PF00596 Class II Aldolase and Adducin N-terminal domain VAB027_805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAB027_806 PF01261 Xylose isomerase-like TIM barrel VAB027_808 PF00072 Response regulator receiver domain VAB027_808 PF00486 Transcriptional regulatory protein, C terminal VAB027_809 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_809 PF00512 His Kinase A (phospho-acceptor) domain VAB027_809 PF00672 HAMP domain VAB027_81 PF01554 MatE VAB027_812 PF00871 Acetokinase family VAB027_814 PF07715 TonB-dependent Receptor Plug Domain VAB027_814 PF00593 TonB dependent receptor VAB027_815 PF12833 Helix-turn-helix domain VAB027_816 PF00005 ABC transporter VAB027_817 PF01032 FecCD transport family VAB027_818 PF01032 FecCD transport family VAB027_822 PF00801 PKD domain VAB027_822 PF05547 Immune inhibitor A peptidase M6 VAB027_823 PF03280 Proteobacterial lipase chaperone protein VAB027_824 PF00561 alpha/beta hydrolase fold VAB027_825 PF00672 HAMP domain VAB027_825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_825 PF12729 Four helix bundle sensory module for signal transduction VAB027_826 PF16458 Beta-prism lectin VAB027_826 PF12563 Hemolytic toxin N terminal VAB027_826 PF07968 Leukocidin/Hemolysin toxin family VAB027_828 PF00657 GDSL-like Lipase/Acylhydrolase VAB027_83 PF00717 Peptidase S24-like VAB027_83 PF01726 LexA DNA binding domain VAB027_830 PF00990 Diguanylate cyclase, GGDEF domain VAB027_830 PF08448 PAS fold VAB027_831 PF07690 Major Facilitator Superfamily VAB027_832 PF03553 Na+/H+ antiporter family VAB027_834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_834 PF00512 His Kinase A (phospho-acceptor) domain VAB027_834 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAB027_835 PF11849 Domain of unknown function (DUF3369) VAB027_836 PF01467 Cytidylyltransferase-like VAB027_838 PF02540 NAD synthase VAB027_839 PF03605 Anaerobic c4-dicarboxylate membrane transporter VAB027_84 PF01553 Acyltransferase VAB027_840 PF00270 DEAD/DEAH box helicase VAB027_840 PF00271 Helicase conserved C-terminal domain VAB027_841 PF00271 Helicase conserved C-terminal domain VAB027_843 PF00478 IMP dehydrogenase / GMP reductase domain VAB027_845 PF07885 Ion channel VAB027_847 PF03853 YjeF-related protein N-terminus VAB027_847 PF01256 Carbohydrate kinase VAB027_848 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAB027_848 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAB027_85 PF01040 UbiA prenyltransferase family VAB027_850 PF00072 Response regulator receiver domain VAB027_853 PF03889 Alternative ribosome-rescue factor A VAB027_854 PF00313 'Cold-shock' DNA-binding domain VAB027_855 PF00175 Oxidoreductase NAD-binding domain VAB027_855 PF00970 Oxidoreductase FAD-binding domain VAB027_855 PF00042 Globin VAB027_857 PF01590 GAF domain VAB027_857 PF00158 Sigma-54 interaction domain VAB027_858 PF01546 Peptidase family M20/M25/M40 VAB027_858 PF07687 Peptidase dimerisation domain VAB027_859 PF07670 Nucleoside recognition VAB027_859 PF07662 Na+ dependent nucleoside transporter C-terminus VAB027_859 PF01773 Na+ dependent nucleoside transporter N-terminus VAB027_86 PF04345 Chorismate lyase VAB027_862 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_862 PF00672 HAMP domain VAB027_862 PF02743 Cache domain VAB027_863 PF17863 AAA lid domain VAB027_863 PF07726 ATPase family associated with various cellular activities (AAA) VAB027_864 PF01882 Protein of unknown function DUF58 VAB027_867 PF13519 von Willebrand factor type A domain VAB027_867 PF07584 Aerotolerance regulator N-terminal VAB027_87 PF03748 Flagellar basal body-associated protein FliL VAB027_870 PF00313 'Cold-shock' DNA-binding domain VAB027_871 PF08448 PAS fold VAB027_871 PF00563 EAL domain VAB027_871 PF00990 Diguanylate cyclase, GGDEF domain VAB027_873 PF12843 Putative quorum-sensing-regulated virulence factor VAB027_874 PF01212 Beta-eliminating lyase VAB027_875 PF03222 Tryptophan/tyrosine permease family VAB027_876 PF00582 Universal stress protein family VAB027_878 PF13244 Domain of unknown function (DUF4040) VAB027_878 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VAB027_878 PF00361 Proton-conducting membrane transporter VAB027_878 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAB027_88 PF00672 HAMP domain VAB027_88 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_88 PF02203 Tar ligand binding domain homologue VAB027_882 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VAB027_883 PF03334 Na+/H+ antiporter subunit VAB027_884 PF00970 Oxidoreductase FAD-binding domain VAB027_884 PF00042 Globin VAB027_884 PF00175 Oxidoreductase NAD-binding domain VAB027_885 PF01327 Polypeptide deformylase VAB027_886 PF00041 Fibronectin type III domain VAB027_886 PF12561 ToxR activated gene A lipoprotein domain VAB027_887 PF01266 FAD dependent oxidoreductase VAB027_89 PF01694 Rhomboid family VAB027_89 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VAB027_890 PF00158 Sigma-54 interaction domain VAB027_890 PF02954 Bacterial regulatory protein, Fis family VAB027_890 PF00072 Response regulator receiver domain VAB027_891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAB027_891 PF00512 His Kinase A (phospho-acceptor) domain VAB027_891 PF02743 Cache domain VAB027_894 PF07690 Major Facilitator Superfamily VAB027_895 PF03009 Glycerophosphoryl diester phosphodiesterase family VAB027_897 PF01048 Phosphorylase superfamily VAB027_898 PF04973 Nicotinamide mononucleotide transporter VAB027_899 PF00356 Bacterial regulatory proteins, lacI family VAB027_9 PF05746 DALR anticodon binding domain VAB027_9 PF02092 Glycyl-tRNA synthetase beta subunit VAB027_90 PF00581 Rhodanese-like domain VAB027_900 PF00294 pfkB family carbohydrate kinase VAB027_901 PF13407 Periplasmic binding protein domain VAB027_902 PF02653 Branched-chain amino acid transport system / permease component VAB027_903 PF00005 ABC transporter VAB027_904 PF05025 RbsD / FucU transport protein family VAB027_907 PF04717 Type VI secretion system, phage-baseplate injector VAB027_907 PF16671 Actin cross-linking domain VAB027_91 PF01026 TatD related DNase VAB027_913 PF00004 ATPase family associated with various cellular activities (AAA) VAB027_913 PF07724 AAA domain (Cdc48 subfamily) VAB027_913 PF17871 AAA lid domain VAB027_913 PF10431 C-terminal, D2-small domain, of ClpB protein VAB027_92 PF00490 Delta-aminolevulinic acid dehydratase VAB027_925 PF00849 RNA pseudouridylate synthase VAB027_926 PF00916 Sulfate permease family VAB027_926 PF01740 STAS domain VAB027_927 PF13419 Haloacid dehalogenase-like hydrolase VAB027_928 PF00196 Bacterial regulatory proteins, luxR family VAB027_928 PF00563 EAL domain VAB027_929 PF00581 Rhodanese-like domain VAB027_930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAB027_930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAB027_931 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VAB027_931 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VAB027_933 PF01483 Proprotein convertase P-domain VAB027_933 PF01447 Thermolysin metallopeptidase, catalytic domain VAB027_933 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAB027_933 PF07504 Fungalysin/Thermolysin Propeptide Motif VAB027_936 PF02001 Protein of unknown function DUF134 VAB027_938 PF00375 Sodium:dicarboxylate symporter family VAB027_94 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAB027_94 PF00476 DNA polymerase family A VAB027_94 PF01612 3'-5' exonuclease VAB027_94 PF01367 5'-3' exonuclease, C-terminal SAM fold VAB027_942 PF00376 MerR family regulatory protein VAB027_942 PF09278 MerR, DNA binding VAB027_943 PF07690 Major Facilitator Superfamily VAB027_944 PF03466 LysR substrate binding domain VAB027_944 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAB027_946 PF13188 PAS domain VAB027_946 PF03707 Bacterial signalling protein N terminal repeat VAB027_946 PF00990 Diguanylate cyclase, GGDEF domain VAB027_946 PF00563 EAL domain VAB027_947 PF01476 LysM domain VAB027_947 PF08525 Opacity-associated protein A N-terminal motif VAB027_947 PF01551 Peptidase family M23 VAB027_949 PF01740 STAS domain VAB027_949 PF00916 Sulfate permease family VAB027_95 PF01926 50S ribosome-binding GTPase VAB027_952 PF00990 Diguanylate cyclase, GGDEF domain VAB027_952 PF00563 EAL domain VAB027_952 PF03707 Bacterial signalling protein N terminal repeat VAB027_953 PF00005 ABC transporter VAB027_954 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_955 PF00528 Binding-protein-dependent transport system inner membrane component VAB027_956 PF12849 PBP superfamily domain VAB027_957 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_957 PF00672 HAMP domain VAB027_957 PF12729 Four helix bundle sensory module for signal transduction VAB027_96 PF00034 Cytochrome c VAB027_961 PF00593 TonB dependent receptor VAB027_961 PF07715 TonB-dependent Receptor Plug Domain VAB027_962 PF00326 Prolyl oligopeptidase family VAB027_962 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VAB027_963 PF00270 DEAD/DEAH box helicase VAB027_963 PF00271 Helicase conserved C-terminal domain VAB027_966 PF03734 L,D-transpeptidase catalytic domain VAB027_966 PF01476 LysM domain VAB027_966 PF17969 L,D-transpeptidase C-terminal domain VAB027_967 PF00875 DNA photolyase VAB027_967 PF03441 FAD binding domain of DNA photolyase VAB027_968 PF13411 MerR HTH family regulatory protein VAB027_969 PF08349 Protein of unknown function (DUF1722) VAB027_970 PF01048 Phosphorylase superfamily VAB027_973 PF00990 Diguanylate cyclase, GGDEF domain VAB027_976 PF12945 Flagellar protein YcgR VAB027_976 PF07238 PilZ domain VAB027_977 PF03616 Sodium/glutamate symporter VAB027_98 PF04220 Der GTPase activator (YihI) VAB027_980 PF02630 SCO1/SenC VAB027_982 PF00375 Sodium:dicarboxylate symporter family VAB027_983 PF04389 Peptidase family M28 VAB027_983 PF02225 PA domain VAB027_984 PF01569 PAP2 superfamily VAB027_988 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAB027_988 PF02743 Cache domain VAB027_988 PF00672 HAMP domain VAB027_99 PF10675 Protein of unknown function (DUF2489) VAB027_995 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VAB027_999 PF01757 Acyltransferase family VAB027_999 PF00842 Alanine racemase, C-terminal domain VAB027_999 PF01168 Alanine racemase, N-terminal domain