VAB027_1 SM00382 ATPases associated with a variety of cellular activities VAB027_1 SM00760 Bacterial dnaA protein helix-turn-helix domain VAB027_100 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_1002 SM00257 Lysin motif VAB027_1006 SM00642 Alpha-amylase domain VAB027_1009 SM00421 helix_turn_helix, Lux Regulon VAB027_1020 SM00470 ParB-like nuclease domain VAB027_1025 SM01236 VAB027_1025 VAB027_1026 SM00822 VAB027_1026 VAB027_1028 SM00448 cheY-homologous receiver domain VAB027_1028 SM00862 Transcriptional regulatory protein, C terminal VAB027_1029 SM00387 Histidine kinase-like ATPases VAB027_1029 SM00388 His Kinase A (phosphoacceptor) domain VAB027_1031 SM00382 ATPases associated with a variety of cellular activities VAB027_1036 SM00448 cheY-homologous receiver domain VAB027_1037 SM00073 Histidine Phosphotransfer domain VAB027_1037 SM00260 Two component signalling adaptor domain VAB027_1037 SM00387 Histidine kinase-like ATPases VAB027_1037 SM01231 VAB027_1037 VAB027_1038 SM00260 Two component signalling adaptor domain VAB027_1039 SM00260 Two component signalling adaptor domain VAB027_1040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1041 SM00138 Methyltransferase, chemotaxis proteins VAB027_1043 SM00448 cheY-homologous receiver domain VAB027_1047 SM00331 Sigma factor PP2C-like phosphatases VAB027_1047 SM00448 cheY-homologous receiver domain VAB027_1049 SM00382 ATPases associated with a variety of cellular activities VAB027_1050 SM00052 Putative diguanylate phosphodiesterase VAB027_1050 SM00267 diguanylate cyclase VAB027_1055 SM00421 helix_turn_helix, Lux Regulon VAB027_106 SM01219 VAB027_106 VAB027_1060 SM00342 helix_turn_helix, arabinose operon control protein VAB027_1065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1066 SM00344 helix_turn_helix ASNC type VAB027_1074 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1074 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1077 SM00342 helix_turn_helix, arabinose operon control protein VAB027_1079 SM00450 Rhodanese Homology Domain VAB027_1080 SM00347 helix_turn_helix multiple antibiotic resistance protein VAB027_1085 SM00849 Metallo-beta-lactamase superfamily VAB027_1092 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_1094 SM00382 ATPases associated with a variety of cellular activities VAB027_1097 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1097 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1102 SM00642 Alpha-amylase domain VAB027_1105 SM00671 Sel1-like repeats. VAB027_1108 SM01154 VAB027_1108 VAB027_1112 SM00342 helix_turn_helix, arabinose operon control protein VAB027_1112 SM01009 AlkA N-terminal domain VAB027_112 SM00052 Putative diguanylate phosphodiesterase VAB027_112 SM00267 diguanylate cyclase VAB027_112 SM00897 FIST N domain VAB027_112 SM01204 VAB027_112 VAB027_1122 SM00347 helix_turn_helix multiple antibiotic resistance protein VAB027_1126 SM00342 helix_turn_helix, arabinose operon control protein VAB027_113 SM01144 VAB027_113 VAB027_1131 SM00382 ATPases associated with a variety of cellular activities VAB027_1136 SM00487 DEAD-like helicases superfamily VAB027_1136 SM00490 helicase superfamily c-terminal domain VAB027_1137 SM01321 VAB027_1137 VAB027_1140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1148 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1149 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_1150 SM00382 ATPases associated with a variety of cellular activities VAB027_1153 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1153 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1160 SM00267 diguanylate cyclase VAB027_1165 SM00267 diguanylate cyclase VAB027_1165 SM01079 VAB027_1165 VAB027_1168 SM00267 diguanylate cyclase VAB027_1169 SM00347 helix_turn_helix multiple antibiotic resistance protein VAB027_1170 SM00260 Two component signalling adaptor domain VAB027_1170 SM00448 cheY-homologous receiver domain VAB027_1172 SM00421 helix_turn_helix, Lux Regulon VAB027_1174 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VAB027_1177 SM00382 ATPases associated with a variety of cellular activities VAB027_1183 SM00420 helix_turn_helix, Deoxyribose operon repressor VAB027_1183 SM01134 VAB027_1183 VAB027_1184 SM00091 PAS domain VAB027_1184 SM00267 diguanylate cyclase VAB027_1187 SM00342 helix_turn_helix, arabinose operon control protein VAB027_1189 SM00357 Cold shock protein domain VAB027_1190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VAB027_1190 SM00267 diguanylate cyclase VAB027_1191 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_1196 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1196 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1202 SM00382 ATPases associated with a variety of cellular activities VAB027_1208 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_1211 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1211 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1215 SM00849 Metallo-beta-lactamase superfamily VAB027_1217 SM01350 VAB027_1217 VAB027_1220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_1221 SM00481 DNA polymerase alpha chain like domain VAB027_1229 SM00829 Enoylreductase VAB027_1241 SM00530 Helix-turn-helix XRE-family like proteins VAB027_1249 SM00357 Cold shock protein domain VAB027_125 SM00382 ATPases associated with a variety of cellular activities VAB027_125 SM00962 SRP54-type protein, GTPase domain VAB027_125 SM00963 SRP54-type protein, helical bundle domain VAB027_1253 SM00095 Transthyretin VAB027_1256 SM00100 Cyclic nucleotide-monophosphate binding domain VAB027_1256 SM00419 helix_turn_helix, cAMP Regulatory protein VAB027_126 SM00382 ATPases associated with a variety of cellular activities VAB027_1261 SM00382 ATPases associated with a variety of cellular activities VAB027_1267 SM00788 Adenylosuccinate synthetase VAB027_1268 SM00671 Sel1-like repeats. VAB027_1270 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_1270 SM00357 Cold shock protein domain VAB027_1270 SM00955 VAB027_1270 VAB027_1271 SM00967 RNA 2'-O ribose methyltransferase substrate binding VAB027_1272 SM01403 VAB027_1272 VAB027_1276 SM01382 VAB027_1276 VAB027_1276 SM01383 VAB027_1276 VAB027_1279 SM00322 K homology RNA-binding domain VAB027_1283 SM01374 VAB027_1283 VAB027_1284 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VAB027_1297 SM00363 S4 RNA-binding domain VAB027_1297 SM01390 VAB027_1297 VAB027_1298 SM00662 RNA polymerases D VAB027_1305 SM00487 DEAD-like helicases superfamily VAB027_1305 SM00490 helicase superfamily c-terminal domain VAB027_1315 SM00382 ATPases associated with a variety of cellular activities VAB027_1329 SM00382 ATPases associated with a variety of cellular activities VAB027_1332 SM00924 MgtE intracellular N domain VAB027_1338 SM00382 ATPases associated with a variety of cellular activities VAB027_134 SM01321 VAB027_134 VAB027_1342 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_1344 SM00382 ATPases associated with a variety of cellular activities VAB027_1351 SM00563 Phosphate acyltransferases VAB027_1357 SM00670 Large family of predicted nucleotide-binding domains VAB027_1358 SM00487 DEAD-like helicases superfamily VAB027_1358 SM00490 helicase superfamily c-terminal domain VAB027_136 SM00360 RNA recognition motif VAB027_1368 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_1380 SM00448 cheY-homologous receiver domain VAB027_1380 SM00862 Transcriptional regulatory protein, C terminal VAB027_1381 SM00091 PAS domain VAB027_1381 SM00387 Histidine kinase-like ATPases VAB027_1381 SM00388 His Kinase A (phosphoacceptor) domain VAB027_1387 SM00382 ATPases associated with a variety of cellular activities VAB027_1395 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_1398 SM01323 VAB027_1398 VAB027_1407 SM00271 DnaJ molecular chaperone homology domain VAB027_1412 SM00562 VAB027_1412 VAB027_1414 SM00530 Helix-turn-helix XRE-family like proteins VAB027_1418 SM00564 beta-propeller repeat VAB027_1419 SM00382 ATPases associated with a variety of cellular activities VAB027_1423 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_1423 SM01240 VAB027_1423 VAB027_1425 SM00495 Chitin-binding domain type 3 VAB027_1435 SM00382 ATPases associated with a variety of cellular activities VAB027_144 SM00052 Putative diguanylate phosphodiesterase VAB027_144 SM00267 diguanylate cyclase VAB027_1442 SM00448 cheY-homologous receiver domain VAB027_1443 SM00091 PAS domain VAB027_1443 SM00387 Histidine kinase-like ATPases VAB027_1448 SM00764 Citrate lyase ligase C-terminal domain VAB027_145 SM00382 ATPases associated with a variety of cellular activities VAB027_145 SM00448 cheY-homologous receiver domain VAB027_146 SM00091 PAS domain VAB027_146 SM00387 Histidine kinase-like ATPases VAB027_146 SM00388 His Kinase A (phosphoacceptor) domain VAB027_1462 SM00487 DEAD-like helicases superfamily VAB027_1463 SM00530 Helix-turn-helix XRE-family like proteins VAB027_1465 SM00530 Helix-turn-helix XRE-family like proteins VAB027_148 SM01230 VAB027_148 VAB027_1498 SM00271 DnaJ molecular chaperone homology domain VAB027_15 SM00829 Enoylreductase VAB027_1508 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_1509 SM01211 VAB027_1509 VAB027_1526 SM00861 Transketolase, pyrimidine binding domain VAB027_1531 SM00981 VAB027_1531 VAB027_1534 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VAB027_1534 SM00475 5'-3' exonuclease VAB027_1536 SM00267 diguanylate cyclase VAB027_1537 SM00028 Tetratricopeptide repeats VAB027_1543 SM00382 ATPases associated with a variety of cellular activities VAB027_1543 SM00930 VAB027_1543 VAB027_1545 SM00354 helix_turn _helix lactose operon repressor VAB027_1547 SM00642 Alpha-amylase domain VAB027_1554 SM00530 Helix-turn-helix XRE-family like proteins VAB027_158 SM00363 S4 RNA-binding domain VAB027_1609 SM00984 UDP binding domain VAB027_161 SM00382 ATPases associated with a variety of cellular activities VAB027_1621 SM00710 Parallel beta-helix repeats VAB027_1634 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_1637 SM00936 Penicillin-binding protein 5, C-terminal domain VAB027_1648 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_1648 SM01091 Transporter associated domain VAB027_1651 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_1658 SM00771 ZipA, C-terminal domain (FtsZ-binding) VAB027_1659 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAB027_1659 SM00292 breast cancer carboxy-terminal domain VAB027_1659 SM00532 Ligase N family VAB027_1662 SM00422 helix_turn_helix, mercury resistance VAB027_1664 SM00244 prohibitin homologues VAB027_1671 SM00862 Transcriptional regulatory protein, C terminal VAB027_1672 SM00387 Histidine kinase-like ATPases VAB027_1676 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VAB027_1691 SM00479 VAB027_1691 VAB027_1695 SM00478 endonuclease III VAB027_1695 SM00525 VAB027_1695 VAB027_1697 SM00900 VAB027_1697 VAB027_1703 SM00487 DEAD-like helicases superfamily VAB027_1703 SM00490 helicase superfamily c-terminal domain VAB027_1704 SM00382 ATPases associated with a variety of cellular activities VAB027_1704 SM00448 cheY-homologous receiver domain VAB027_1707 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_1708 SM00852 Probable molybdopterin binding domain VAB027_1712 SM00267 diguanylate cyclase VAB027_1713 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_1722 SM00226 Low molecular weight phosphatase family VAB027_1731 SM00448 cheY-homologous receiver domain VAB027_1735 SM00382 ATPases associated with a variety of cellular activities VAB027_1737 SM00493 VAB027_1737 VAB027_1746 SM00344 helix_turn_helix ASNC type VAB027_1751 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_1751 SM00267 diguanylate cyclase VAB027_1752 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VAB027_1753 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_1756 SM00495 Chitin-binding domain type 3 VAB027_1756 SM00636 VAB027_1756 VAB027_1759 SM00342 helix_turn_helix, arabinose operon control protein VAB027_1763 SM00448 cheY-homologous receiver domain VAB027_1764 SM00448 cheY-homologous receiver domain VAB027_1766 SM00387 Histidine kinase-like ATPases VAB027_1766 SM00388 His Kinase A (phosphoacceptor) domain VAB027_1767 SM00387 Histidine kinase-like ATPases VAB027_1768 SM00052 Putative diguanylate phosphodiesterase VAB027_1768 SM00448 cheY-homologous receiver domain VAB027_1769 SM00448 cheY-homologous receiver domain VAB027_177 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_177 SM00732 Likely ribonuclease with RNase H fold. VAB027_1770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1770 SM00387 Histidine kinase-like ATPases VAB027_1775 SM00382 ATPases associated with a variety of cellular activities VAB027_1776 SM00382 ATPases associated with a variety of cellular activities VAB027_1784 SM00382 ATPases associated with a variety of cellular activities VAB027_1786 SM00267 diguanylate cyclase VAB027_1789 SM00382 ATPases associated with a variety of cellular activities VAB027_179 SM00267 diguanylate cyclase VAB027_1793 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_1793 SM00876 Biotin and Thiamin Synthesis associated domain VAB027_180 SM00448 cheY-homologous receiver domain VAB027_180 SM00862 Transcriptional regulatory protein, C terminal VAB027_181 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_181 SM00387 Histidine kinase-like ATPases VAB027_181 SM00388 His Kinase A (phosphoacceptor) domain VAB027_1811 SM00528 Domain in histone-like proteins of HNS family VAB027_1823 SM00357 Cold shock protein domain VAB027_1825 SM00382 ATPases associated with a variety of cellular activities VAB027_1825 SM01086 C-terminal, D2-small domain, of ClpB protein VAB027_183 SM00487 DEAD-like helicases superfamily VAB027_183 SM00490 helicase superfamily c-terminal domain VAB027_1836 SM00448 cheY-homologous receiver domain VAB027_1837 SM00387 Histidine kinase-like ATPases VAB027_184 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_184 SM00954 Region found in RelA / SpoT proteins VAB027_185 SM01409 VAB027_185 VAB027_1856 SM00481 DNA polymerase alpha chain like domain VAB027_1858 SM00363 S4 RNA-binding domain VAB027_1859 SM00382 ATPases associated with a variety of cellular activities VAB027_186 SM00072 Guanylate kinase homologues. VAB027_1860 SM00382 ATPases associated with a variety of cellular activities VAB027_1864 SM00267 diguanylate cyclase VAB027_1867 SM00919 Malic enzyme, NAD binding domain VAB027_1867 SM01274 VAB027_1867 VAB027_1872 SM00271 DnaJ molecular chaperone homology domain VAB027_1872 SM00671 Sel1-like repeats. VAB027_1879 SM00020 Trypsin-like serine protease VAB027_1885 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAB027_1885 SM00866 VAB027_1885 VAB027_1888 SM00841 Elongation factor P, C-terminal VAB027_1888 SM01185 VAB027_1888 VAB027_1890 SM00486 DNA polymerase type-B family VAB027_1891 SM00052 Putative diguanylate phosphodiesterase VAB027_1892 SM00421 helix_turn_helix, Lux Regulon VAB027_1892 SM00448 cheY-homologous receiver domain VAB027_1893 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAB027_1893 SM00465 GIY-YIG type nucleases (URI domain) VAB027_1899 SM01321 VAB027_1899 VAB027_1901 SM00267 diguanylate cyclase VAB027_1903 SM00873 B3/4 domain VAB027_1903 SM00874 tRNA synthetase B5 domain VAB027_1903 SM00896 Ferredoxin-fold anticodon binding domain VAB027_1904 SM00411 bacterial (prokaryotic) histone like domain VAB027_191 SM01091 Transporter associated domain VAB027_1919 SM00855 Phosphoglycerate mutase family VAB027_192 SM00421 helix_turn_helix, Lux Regulon VAB027_192 SM00448 cheY-homologous receiver domain VAB027_1922 SM00382 ATPases associated with a variety of cellular activities VAB027_1925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1925 SM01049 VAB027_1925 VAB027_1928 SM00852 Probable molybdopterin binding domain VAB027_1934 SM00434 DNA Topoisomerase IV VAB027_1935 SM00450 Rhodanese Homology Domain VAB027_1936 SM00342 helix_turn_helix, arabinose operon control protein VAB027_1947 SM00849 Metallo-beta-lactamase superfamily VAB027_1952 SM00387 Histidine kinase-like ATPases VAB027_1952 SM01049 VAB027_1952 VAB027_1953 SM00421 helix_turn_helix, Lux Regulon VAB027_1953 SM00448 cheY-homologous receiver domain VAB027_1954 SM00347 helix_turn_helix multiple antibiotic resistance protein VAB027_1956 SM00495 Chitin-binding domain type 3 VAB027_1962 SM00354 helix_turn _helix lactose operon repressor VAB027_1965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1967 SM01321 VAB027_1967 VAB027_1968 SM00479 VAB027_1968 VAB027_1969 SM00100 Cyclic nucleotide-monophosphate binding domain VAB027_1969 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_1971 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1971 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_1974 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1974 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1984 SM00091 PAS domain VAB027_1984 SM00382 ATPases associated with a variety of cellular activities VAB027_1988 SM01005 Alanine racemase, C-terminal domain VAB027_1989 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_1989 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_199 SM00267 diguanylate cyclase VAB027_1991 SM00387 Histidine kinase-like ATPases VAB027_1992 SM00448 cheY-homologous receiver domain VAB027_1995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_1995 SM00387 Histidine kinase-like ATPases VAB027_1995 SM00388 His Kinase A (phosphoacceptor) domain VAB027_1996 SM00448 cheY-homologous receiver domain VAB027_1996 SM00862 Transcriptional regulatory protein, C terminal VAB027_2 SM00480 DNA polymerase III beta subunit VAB027_2001 SM00382 ATPases associated with a variety of cellular activities VAB027_2012 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAB027_2012 SM00895 VAB027_2012 VAB027_2025 SM00448 cheY-homologous receiver domain VAB027_2025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_203 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_203 SM00387 Histidine kinase-like ATPases VAB027_203 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2030 SM00267 diguanylate cyclase VAB027_2031 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VAB027_2035 SM00382 ATPases associated with a variety of cellular activities VAB027_2038 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_204 SM00448 cheY-homologous receiver domain VAB027_204 SM00862 Transcriptional regulatory protein, C terminal VAB027_2042 SM00028 Tetratricopeptide repeats VAB027_2042 SM00267 diguanylate cyclase VAB027_2046 SM00267 diguanylate cyclase VAB027_2048 SM00267 diguanylate cyclase VAB027_2059 SM00382 ATPases associated with a variety of cellular activities VAB027_2059 SM00487 DEAD-like helicases superfamily VAB027_2059 SM00490 helicase superfamily c-terminal domain VAB027_2059 SM00847 Helicase associated domain (HA2) Add an annotation VAB027_2069 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2070 SM00448 cheY-homologous receiver domain VAB027_2072 SM00073 Histidine Phosphotransfer domain VAB027_2072 SM00260 Two component signalling adaptor domain VAB027_2072 SM00387 Histidine kinase-like ATPases VAB027_2072 SM01231 VAB027_2072 VAB027_2073 SM00448 cheY-homologous receiver domain VAB027_2074 SM00138 Methyltransferase, chemotaxis proteins VAB027_2076 SM00448 cheY-homologous receiver domain VAB027_2077 SM00260 Two component signalling adaptor domain VAB027_2078 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2079 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2079 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_2080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VAB027_2080 SM00091 PAS domain VAB027_2080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2081 SM00487 DEAD-like helicases superfamily VAB027_2081 SM00490 helicase superfamily c-terminal domain VAB027_2086 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2086 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_21 SM00382 ATPases associated with a variety of cellular activities VAB027_2101 SM00382 ATPases associated with a variety of cellular activities VAB027_2107 SM00100 Cyclic nucleotide-monophosphate binding domain VAB027_2107 SM00419 helix_turn_helix, cAMP Regulatory protein VAB027_2117 SM00897 FIST N domain VAB027_2117 SM01204 VAB027_2117 VAB027_2118 SM00387 Histidine kinase-like ATPases VAB027_2118 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2118 SM00448 cheY-homologous receiver domain VAB027_2119 SM00382 ATPases associated with a variety of cellular activities VAB027_2121 SM00382 ATPases associated with a variety of cellular activities VAB027_2132 SM00382 ATPases associated with a variety of cellular activities VAB027_2143 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAB027_2143 SM00245 tail specific protease VAB027_2144 SM00945 ProQ/FINO family VAB027_2146 SM00382 ATPases associated with a variety of cellular activities VAB027_215 SM00919 Malic enzyme, NAD binding domain VAB027_215 SM01274 VAB027_215 VAB027_2150 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_2159 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VAB027_2166 SM00382 ATPases associated with a variety of cellular activities VAB027_2167 SM00387 Histidine kinase-like ATPases VAB027_2167 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2168 SM00382 ATPases associated with a variety of cellular activities VAB027_2168 SM00448 cheY-homologous receiver domain VAB027_217 SM00487 DEAD-like helicases superfamily VAB027_217 SM00490 helicase superfamily c-terminal domain VAB027_2171 SM00382 ATPases associated with a variety of cellular activities VAB027_2173 SM00852 Probable molybdopterin binding domain VAB027_2176 SM01144 VAB027_2176 VAB027_2178 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_218 SM00354 helix_turn _helix lactose operon repressor VAB027_2195 SM00382 ATPases associated with a variety of cellular activities VAB027_2196 SM00420 helix_turn_helix, Deoxyribose operon repressor VAB027_2196 SM01134 VAB027_2196 VAB027_22 SM00563 Phosphate acyltransferases VAB027_2200 SM00354 helix_turn _helix lactose operon repressor VAB027_2204 SM00849 Metallo-beta-lactamase superfamily VAB027_2209 SM00382 ATPases associated with a variety of cellular activities VAB027_221 SM00382 ATPases associated with a variety of cellular activities VAB027_221 SM01086 C-terminal, D2-small domain, of ClpB protein VAB027_2216 SM01022 VAB027_2216 VAB027_2224 SM00248 ankyrin repeats VAB027_2225 SM01060 VAB027_2225 VAB027_2230 SM00849 Metallo-beta-lactamase superfamily VAB027_2236 SM00822 VAB027_2236 VAB027_2237 SM00052 Putative diguanylate phosphodiesterase VAB027_2238 SM00267 diguanylate cyclase VAB027_2246 SM00267 diguanylate cyclase VAB027_2249 SM00260 Two component signalling adaptor domain VAB027_2249 SM00448 cheY-homologous receiver domain VAB027_2251 SM00448 cheY-homologous receiver domain VAB027_2252 SM00387 Histidine kinase-like ATPases VAB027_2260 SM00028 Tetratricopeptide repeats VAB027_2260 SM00386 HAT (Half-A-TPR) repeats VAB027_2268 SM00327 von Willebrand factor (vWF) type A domain VAB027_2277 SM00382 ATPases associated with a variety of cellular activities VAB027_2282 SM00363 S4 RNA-binding domain VAB027_2283 SM00487 DEAD-like helicases superfamily VAB027_2283 SM00490 helicase superfamily c-terminal domain VAB027_2285 SM00448 cheY-homologous receiver domain VAB027_2285 SM00862 Transcriptional regulatory protein, C terminal VAB027_2286 SM00387 Histidine kinase-like ATPases VAB027_2288 SM00052 Putative diguanylate phosphodiesterase VAB027_2290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_2296 SM00020 Trypsin-like serine protease VAB027_2298 SM00448 cheY-homologous receiver domain VAB027_2299 SM00052 Putative diguanylate phosphodiesterase VAB027_2299 SM00421 helix_turn_helix, Lux Regulon VAB027_2299 SM00448 cheY-homologous receiver domain VAB027_230 SM00883 Chaperonin 10 Kd subunit VAB027_2300 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_2300 SM00073 Histidine Phosphotransfer domain VAB027_2300 SM00387 Histidine kinase-like ATPases VAB027_2300 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2300 SM00448 cheY-homologous receiver domain VAB027_2300 SM00918 Ligated ion channel L-glutamate- and glycine-binding site VAB027_2301 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_2306 SM00382 ATPases associated with a variety of cellular activities VAB027_2313 SM00382 ATPases associated with a variety of cellular activities VAB027_2317 SM00155 Phospholipase D. Active site motifs. VAB027_2326 SM00382 ATPases associated with a variety of cellular activities VAB027_2331 SM00382 ATPases associated with a variety of cellular activities VAB027_2332 SM00382 ATPases associated with a variety of cellular activities VAB027_2335 SM01131 VAB027_2335 VAB027_234 SM00841 Elongation factor P, C-terminal VAB027_234 SM01185 VAB027_234 VAB027_2355 SM00052 Putative diguanylate phosphodiesterase VAB027_2355 SM00091 PAS domain VAB027_2356 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_2358 SM00344 helix_turn_helix ASNC type VAB027_2364 SM00448 cheY-homologous receiver domain VAB027_2364 SM00862 Transcriptional regulatory protein, C terminal VAB027_2366 SM00354 helix_turn _helix lactose operon repressor VAB027_2373 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VAB027_2373 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VAB027_2373 SM00493 VAB027_2373 VAB027_2378 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_2397 SM00862 Transcriptional regulatory protein, C terminal VAB027_240 SM00450 Rhodanese Homology Domain VAB027_2403 SM00382 ATPases associated with a variety of cellular activities VAB027_2409 SM00862 Transcriptional regulatory protein, C terminal VAB027_243 SM00971 Serine acetyltransferase, N-terminal VAB027_2431 SM00246 Wiskott Aldrich syndrome homology region 2 VAB027_2437 SM01276 VAB027_2437 VAB027_2444 SM00635 Bacterial Ig-like domain 2 VAB027_2449 SM01130 VAB027_2449 VAB027_2464 SM00671 Sel1-like repeats. VAB027_2465 SM00267 diguanylate cyclase VAB027_247 SM00859 Semialdehyde dehydrogenase, NAD binding domain VAB027_2470 SM00382 ATPases associated with a variety of cellular activities VAB027_2473 SM00387 Histidine kinase-like ATPases VAB027_2473 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2473 SM00448 cheY-homologous receiver domain VAB027_2487 SM00382 ATPases associated with a variety of cellular activities VAB027_2489 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAB027_2491 SM00840 VAB027_2491 VAB027_2494 SM00052 Putative diguanylate phosphodiesterase VAB027_2498 SM00491 VAB027_2498 VAB027_2502 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2502 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_2506 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_2506 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VAB027_2507 SM00382 ATPases associated with a variety of cellular activities VAB027_2513 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2517 SM00763 PrkA AAA domain VAB027_2523 SM00382 ATPases associated with a variety of cellular activities VAB027_2524 SM00849 Metallo-beta-lactamase superfamily VAB027_2527 SM00382 ATPases associated with a variety of cellular activities VAB027_2530 SM00487 DEAD-like helicases superfamily VAB027_2530 SM00490 helicase superfamily c-terminal domain VAB027_2530 SM00982 VAB027_2530 VAB027_2530 SM01058 CarD-like/TRCF domain VAB027_2542 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2542 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_2545 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAB027_2548 SM00843 VAB027_2548 VAB027_2549 SM00344 helix_turn_helix ASNC type VAB027_2550 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VAB027_2550 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VAB027_2555 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VAB027_2556 SM00028 Tetratricopeptide repeats VAB027_2558 SM00411 bacterial (prokaryotic) histone like domain VAB027_2559 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_2561 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAB027_2563 SM00411 bacterial (prokaryotic) histone like domain VAB027_2564 SM00382 ATPases associated with a variety of cellular activities VAB027_2564 SM00464 Found in ATP-dependent protease La (LON) VAB027_2565 SM00382 ATPases associated with a variety of cellular activities VAB027_2565 SM00994 ClpX C4-type zinc finger VAB027_2565 SM01086 C-terminal, D2-small domain, of ClpB protein VAB027_2568 SM00387 Histidine kinase-like ATPases VAB027_2568 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2569 SM00382 ATPases associated with a variety of cellular activities VAB027_2569 SM00448 cheY-homologous receiver domain VAB027_2576 SM00052 Putative diguanylate phosphodiesterase VAB027_2576 SM00267 diguanylate cyclase VAB027_2579 SM00563 Phosphate acyltransferases VAB027_2592 SM00495 Chitin-binding domain type 3 VAB027_2592 SM00636 VAB027_2592 VAB027_260 SM00965 Secretin and TonB N terminus short domain VAB027_2602 SM00978 VAB027_2602 VAB027_2605 SM00563 Phosphate acyltransferases VAB027_2608 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VAB027_2614 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_2615 SM01144 VAB027_2615 VAB027_2616 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_2619 SM00474 3'-5' exonuclease VAB027_2625 SM00487 DEAD-like helicases superfamily VAB027_2625 SM00491 VAB027_2625 VAB027_2630 SM00870 VAB027_2630 VAB027_2634 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_2640 SM00260 Two component signalling adaptor domain VAB027_2640 SM00448 cheY-homologous receiver domain VAB027_2656 SM00825 Beta-ketoacyl synthase VAB027_2658 SM00822 VAB027_2658 VAB027_2659 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VAB027_2665 SM00363 S4 RNA-binding domain VAB027_2667 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_2672 SM00859 Semialdehyde dehydrogenase, NAD binding domain VAB027_2674 SM00073 Histidine Phosphotransfer domain VAB027_2681 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VAB027_2681 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VAB027_2681 SM00493 VAB027_2681 VAB027_2695 SM00382 ATPases associated with a variety of cellular activities VAB027_2697 SM00260 Two component signalling adaptor domain VAB027_2698 SM00260 Two component signalling adaptor domain VAB027_270 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_2700 SM00448 cheY-homologous receiver domain VAB027_2701 SM00073 Histidine Phosphotransfer domain VAB027_2701 SM00260 Two component signalling adaptor domain VAB027_2701 SM00387 Histidine kinase-like ATPases VAB027_2701 SM01231 VAB027_2701 VAB027_2703 SM00448 cheY-homologous receiver domain VAB027_2706 SM00382 ATPases associated with a variety of cellular activities VAB027_2706 SM00962 SRP54-type protein, GTPase domain VAB027_2708 SM00855 Phosphoglycerate mutase family VAB027_2711 SM00836 DALR anticodon binding domain VAB027_2711 SM01016 Arginyl tRNA synthetase N terminal dom VAB027_2715 SM00899 VAB027_2715 VAB027_2716 SM00342 helix_turn_helix, arabinose operon control protein VAB027_2718 SM00382 ATPases associated with a variety of cellular activities VAB027_2720 SM00881 CoA binding domain VAB027_2723 SM00861 Transketolase, pyrimidine binding domain VAB027_2741 SM00859 Semialdehyde dehydrogenase, NAD binding domain VAB027_2743 SM00825 Beta-ketoacyl synthase VAB027_275 SM01150 VAB027_275 VAB027_2751 SM00463 Small MutS-related domain VAB027_2762 SM00382 ATPases associated with a variety of cellular activities VAB027_2767 SM00382 ATPases associated with a variety of cellular activities VAB027_2767 SM00448 cheY-homologous receiver domain VAB027_2768 SM00091 PAS domain VAB027_2768 SM00387 Histidine kinase-like ATPases VAB027_2768 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2769 SM00382 ATPases associated with a variety of cellular activities VAB027_2786 SM01130 VAB027_2786 VAB027_2789 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_2789 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_2792 SM00028 Tetratricopeptide repeats VAB027_2796 SM01321 VAB027_2796 VAB027_2805 SM00937 VAB027_2805 VAB027_2809 SM01400 VAB027_2809 VAB027_2834 SM00047 Lysozyme subfamily 2 VAB027_2843 SM00138 Methyltransferase, chemotaxis proteins VAB027_2844 SM00260 Two component signalling adaptor domain VAB027_2844 SM00448 cheY-homologous receiver domain VAB027_2845 SM00858 VAB027_2845 VAB027_2851 SM00823 Phosphopantetheine attachment site VAB027_2859 SM01081 Putative carbohydrate binding domain VAB027_2864 SM00463 Small MutS-related domain VAB027_2865 SM00363 S4 RNA-binding domain VAB027_2867 SM00267 diguanylate cyclase VAB027_2875 SM00479 VAB027_2875 VAB027_2878 SM00849 Metallo-beta-lactamase superfamily VAB027_2879 SM00257 Lysin motif VAB027_2881 SM00938 Nitrogen regulatory protein P-II VAB027_2884 SM00977 TilS substrate C-terminal domain VAB027_2886 SM00481 DNA polymerase alpha chain like domain VAB027_2892 SM00935 Outer membrane protein (OmpH-like) VAB027_2894 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAB027_2903 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_2914 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VAB027_2924 SM00267 diguanylate cyclase VAB027_2932 SM00900 VAB027_2932 VAB027_2942 SM00464 Found in ATP-dependent protease La (LON) VAB027_2949 SM00925 MltA specific insert domain VAB027_2968 SM01038 Beta galactosidase small chain VAB027_2969 SM00354 helix_turn _helix lactose operon repressor VAB027_2973 SM00838 Elongation factor G C-terminus VAB027_2973 SM00889 Elongation factor G, domain IV VAB027_2974 SM00382 ATPases associated with a variety of cellular activities VAB027_2980 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VAB027_2981 SM01133 VAB027_2981 VAB027_2989 SM00986 Uracil DNA glycosylase superfamily VAB027_2989 SM00987 UreE urease accessory protein, C-terminal domain VAB027_2990 SM00518 AP endonuclease family 2 VAB027_2998 SM00448 cheY-homologous receiver domain VAB027_2998 SM00862 Transcriptional regulatory protein, C terminal VAB027_2999 SM00073 Histidine Phosphotransfer domain VAB027_2999 SM00091 PAS domain VAB027_2999 SM00387 Histidine kinase-like ATPases VAB027_2999 SM00388 His Kinase A (phosphoacceptor) domain VAB027_2999 SM00448 cheY-homologous receiver domain VAB027_3000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VAB027_3000 SM00091 PAS domain VAB027_3000 SM00267 diguanylate cyclase VAB027_3001 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_301 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_301 SM00357 Cold shock protein domain VAB027_301 SM00955 VAB027_301 VAB027_3017 SM00851 MGS-like domain VAB027_3017 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VAB027_3018 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VAB027_302 SM00357 Cold shock protein domain VAB027_3021 SM00957 SecA DEAD-like domain VAB027_3021 SM00958 SecA preprotein cross-linking domain VAB027_3024 SM00864 Tubulin/FtsZ family, GTPase domain VAB027_3024 SM00865 Tubulin/FtsZ family, C-terminal domain VAB027_3025 SM00842 Cell division protein FtsA VAB027_303 SM01276 VAB027_303 VAB027_304 SM00487 DEAD-like helicases superfamily VAB027_304 SM00490 helicase superfamily c-terminal domain VAB027_3040 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAB027_3040 SM00895 VAB027_3040 VAB027_3047 SM00644 VAB027_3047 VAB027_305 SM00966 SpoVT / AbrB like domain VAB027_3056 SM00434 DNA Topoisomerase IV VAB027_3057 SM00387 Histidine kinase-like ATPases VAB027_3057 SM00433 TopoisomeraseII VAB027_3065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_3065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_3067 SM00880 VAB027_3067 VAB027_3067 SM01118 VAB027_3067 VAB027_3070 SM00287 Bacterial SH3 domain homologues VAB027_3072 SM00382 ATPases associated with a variety of cellular activities VAB027_3074 SM01192 VAB027_3074 VAB027_3074 SM01193 VAB027_3074 VAB027_3077 SM00954 Region found in RelA / SpoT proteins VAB027_3079 SM00267 diguanylate cyclase VAB027_3080 SM00073 Histidine Phosphotransfer domain VAB027_3080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_3080 SM00387 Histidine kinase-like ATPases VAB027_3080 SM00388 His Kinase A (phosphoacceptor) domain VAB027_3080 SM00448 cheY-homologous receiver domain VAB027_3087 SM00358 Double-stranded RNA binding motif VAB027_3087 SM00535 Ribonuclease III family VAB027_3111 SM00014 Acid phosphatase homologues VAB027_3112 SM00917 LeuA allosteric (dimerisation) domain VAB027_3113 SM01329 VAB027_3113 VAB027_3124 SM00382 ATPases associated with a variety of cellular activities VAB027_3124 SM01086 C-terminal, D2-small domain, of ClpB protein VAB027_3126 SM00363 S4 RNA-binding domain VAB027_3129 SM00830 Chorismate mutase type II VAB027_3131 SM00052 Putative diguanylate phosphodiesterase VAB027_3131 SM00267 diguanylate cyclase VAB027_3150 SM00382 ATPases associated with a variety of cellular activities VAB027_3152 SM00830 Chorismate mutase type II VAB027_3155 SM00448 cheY-homologous receiver domain VAB027_3155 SM00850 LytTr DNA-binding domain VAB027_316 SM00357 Cold shock protein domain VAB027_3166 SM00904 Riboflavin kinase VAB027_3169 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VAB027_3175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VAB027_3177 SM00927 DNA mismatch repair enzyme MutH VAB027_318 SM00357 Cold shock protein domain VAB027_3180 SM00382 ATPases associated with a variety of cellular activities VAB027_3182 SM00937 VAB027_3182 VAB027_3189 SM00052 Putative diguanylate phosphodiesterase VAB027_3189 SM00267 diguanylate cyclase VAB027_319 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_319 SM00955 VAB027_319 VAB027_3193 SM00052 Putative diguanylate phosphodiesterase VAB027_3193 SM00091 PAS domain VAB027_3193 SM00267 diguanylate cyclase VAB027_3197 SM00347 helix_turn_helix multiple antibiotic resistance protein VAB027_3198 SM00028 Tetratricopeptide repeats VAB027_3199 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_3199 SM00322 K homology RNA-binding domain VAB027_3200 SM01387 VAB027_3200 VAB027_3204 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_3204 SM00322 K homology RNA-binding domain VAB027_3212 SM00382 ATPases associated with a variety of cellular activities VAB027_3214 SM01103 VAB027_3214 VAB027_3218 SM00363 S4 RNA-binding domain VAB027_3227 SM00091 PAS domain VAB027_3227 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_3227 SM00387 Histidine kinase-like ATPases VAB027_3227 SM00388 His Kinase A (phosphoacceptor) domain VAB027_3227 SM00448 cheY-homologous receiver domain VAB027_3231 SM00382 ATPases associated with a variety of cellular activities VAB027_3232 SM00382 ATPases associated with a variety of cellular activities VAB027_3236 SM01068 Putative carbohydrate binding domain VAB027_3238 SM00382 ATPases associated with a variety of cellular activities VAB027_3242 SM00938 Nitrogen regulatory protein P-II VAB027_3247 SM00487 DEAD-like helicases superfamily VAB027_3247 SM00490 helicase superfamily c-terminal domain VAB027_3247 SM00847 Helicase associated domain (HA2) Add an annotation VAB027_325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VAB027_325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_3257 SM00382 ATPases associated with a variety of cellular activities VAB027_3259 SM00947 Carbonic anhydrase VAB027_3266 SM00749 bacterial OsmY and nodulation domain VAB027_3276 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAB027_3277 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAB027_3282 SM00382 ATPases associated with a variety of cellular activities VAB027_3282 SM00962 SRP54-type protein, GTPase domain VAB027_3282 SM00963 SRP54-type protein, helical bundle domain VAB027_3285 SM01091 Transporter associated domain VAB027_3290 SM00829 Enoylreductase VAB027_330 SM00642 Alpha-amylase domain VAB027_3304 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VAB027_3306 SM00382 ATPases associated with a variety of cellular activities VAB027_3308 SM00382 ATPases associated with a variety of cellular activities VAB027_3316 SM00257 Lysin motif VAB027_3325 SM00905 Dihydroneopterin aldolase VAB027_3326 SM01207 VAB027_3326 VAB027_333 SM00382 ATPases associated with a variety of cellular activities VAB027_3331 SM00400 zinc finger VAB027_3331 SM00493 VAB027_3331 VAB027_3331 SM00766 DNA primase DnaG DnaB-binding VAB027_3334 SM00563 Phosphate acyltransferases VAB027_3337 SM00420 helix_turn_helix, Deoxyribose operon repressor VAB027_3337 SM01134 VAB027_3337 VAB027_3347 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_3350 SM00861 Transketolase, pyrimidine binding domain VAB027_3352 SM00731 SprT homologues. VAB027_3357 SM00732 Likely ribonuclease with RNase H fold. VAB027_3358 SM00363 S4 RNA-binding domain VAB027_3359 SM00421 helix_turn_helix, Lux Regulon VAB027_3361 SM00382 ATPases associated with a variety of cellular activities VAB027_3365 SM01152 VAB027_3365 VAB027_3368 SM00729 Elongator protein 3, MiaB family, Radical SAM VAB027_337 SM00387 Histidine kinase-like ATPases VAB027_3371 SM00478 endonuclease III VAB027_3371 SM00525 VAB027_3371 VAB027_3378 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_3378 SM01049 VAB027_3378 VAB027_338 SM00448 cheY-homologous receiver domain VAB027_338 SM00850 LytTr DNA-binding domain VAB027_3384 SM00271 DnaJ molecular chaperone homology domain VAB027_3388 SM00650 Ribosomal RNA adenine dimethylases VAB027_340 SM00267 diguanylate cyclase VAB027_3411 SM00316 Ribosomal protein S1-like RNA-binding domain VAB027_3416 SM00560 LamG-like jellyroll fold domain VAB027_3426 SM00382 ATPases associated with a variety of cellular activities VAB027_3427 SM00028 Tetratricopeptide repeats VAB027_3429 SM00965 Secretin and TonB N terminus short domain VAB027_3433 SM00052 Putative diguanylate phosphodiesterase VAB027_3433 SM00267 diguanylate cyclase VAB027_3435 SM00421 helix_turn_helix, Lux Regulon VAB027_3441 SM01018 B12 binding domain VAB027_3458 SM00849 Metallo-beta-lactamase superfamily VAB027_346 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAB027_3461 SM01005 Alanine racemase, C-terminal domain VAB027_3462 SM00382 ATPases associated with a variety of cellular activities VAB027_3471 SM00838 Elongation factor G C-terminus VAB027_3471 SM00889 Elongation factor G, domain IV VAB027_3479 SM00320 WD40 repeats VAB027_3482 SM00244 prohibitin homologues VAB027_3483 SM00244 prohibitin homologues VAB027_3487 SM00853 MutL C terminal dimerisation domain VAB027_3487 SM01340 VAB027_3487 VAB027_3488 SM00257 Lysin motif VAB027_3488 SM00646 VAB027_3488 VAB027_349 SM01091 Transporter associated domain VAB027_35 SM00257 Lysin motif VAB027_350 SM01266 VAB027_350 VAB027_3500 SM00479 VAB027_3500 VAB027_3513 SM00663 RNA polymerase I subunit A N-terminus VAB027_3518 SM00649 Ribosomal protein L11/L12 VAB027_3519 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VAB027_3519 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VAB027_3530 SM00155 Phospholipase D. Active site motifs. VAB027_3540 SM00357 Cold shock protein domain VAB027_3540 SM00382 ATPases associated with a variety of cellular activities VAB027_3540 SM00959 Rho termination factor, N-terminal domain VAB027_3542 SM00487 DEAD-like helicases superfamily VAB027_3542 SM00490 helicase superfamily c-terminal domain VAB027_3544 SM00387 Histidine kinase-like ATPases VAB027_3544 SM00388 His Kinase A (phosphoacceptor) domain VAB027_3544 SM00448 cheY-homologous receiver domain VAB027_3546 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_3547 SM00479 VAB027_3547 VAB027_3551 SM00878 Biotin carboxylase C-terminal domain VAB027_3557 SM00354 helix_turn _helix lactose operon repressor VAB027_3564 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_3564 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_3564 SM01049 VAB027_3564 VAB027_3567 SM00862 Transcriptional regulatory protein, C terminal VAB027_3568 SM00422 helix_turn_helix, mercury resistance VAB027_3569 SM00798 AICARFT/IMPCHase bienzyme VAB027_3569 SM00851 MGS-like domain VAB027_3570 SM01209 VAB027_3570 VAB027_3570 SM01210 VAB027_3570 VAB027_3572 SM00411 bacterial (prokaryotic) histone like domain VAB027_3583 SM00986 Uracil DNA glycosylase superfamily VAB027_3583 SM00987 UreE urease accessory protein, C-terminal domain VAB027_3585 SM00849 Metallo-beta-lactamase superfamily VAB027_3585 SM01027 Beta-Casp domain VAB027_3629 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VAB027_3629 SM01232 VAB027_3629 VAB027_3634 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_3634 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_3634 SM01049 VAB027_3634 VAB027_3655 SM00487 DEAD-like helicases superfamily VAB027_366 SM00883 Chaperonin 10 Kd subunit VAB027_3669 SM00382 ATPases associated with a variety of cellular activities VAB027_367 SM00924 MgtE intracellular N domain VAB027_3671 SM00382 ATPases associated with a variety of cellular activities VAB027_3674 SM00341 Helicase and RNase D C-terminal VAB027_3674 SM00487 DEAD-like helicases superfamily VAB027_3674 SM00490 helicase superfamily c-terminal domain VAB027_3674 SM00956 VAB027_3674 VAB027_3677 SM00342 helix_turn_helix, arabinose operon control protein VAB027_3687 SM00382 ATPases associated with a variety of cellular activities VAB027_3718 SM00382 ATPases associated with a variety of cellular activities VAB027_3726 SM00470 ParB-like nuclease domain VAB027_3729 SM01228 VAB027_3729 VAB027_3732 SM00857 Resolvase, N terminal domain VAB027_3733 SM00382 ATPases associated with a variety of cellular activities VAB027_3763 SM00382 ATPases associated with a variety of cellular activities VAB027_3765 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_378 SM00357 Cold shock protein domain VAB027_378 SM00955 VAB027_378 VAB027_379 SM00487 DEAD-like helicases superfamily VAB027_379 SM00490 helicase superfamily c-terminal domain VAB027_380 SM00020 Trypsin-like serine protease VAB027_389 SM00271 DnaJ molecular chaperone homology domain VAB027_395 SM00382 ATPases associated with a variety of cellular activities VAB027_397 SM00984 UDP binding domain VAB027_399 SM00797 Allophanate hydrolase subunit 2 VAB027_4 SM00387 Histidine kinase-like ATPases VAB027_4 SM00433 TopoisomeraseII VAB027_40 SM01001 AIR carboxylase VAB027_400 SM00796 Allophanate hydrolase subunit 1 VAB027_403 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_403 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_407 SM00487 DEAD-like helicases superfamily VAB027_407 SM00490 helicase superfamily c-terminal domain VAB027_415 SM00327 von Willebrand factor (vWF) type A domain VAB027_417 SM00382 ATPases associated with a variety of cellular activities VAB027_418 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_418 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VAB027_443 SM00387 Histidine kinase-like ATPases VAB027_443 SM00388 His Kinase A (phosphoacceptor) domain VAB027_443 SM00448 cheY-homologous receiver domain VAB027_456 SM00382 ATPases associated with a variety of cellular activities VAB027_460 SM00989 VAB027_460 VAB027_461 SM00387 Histidine kinase-like ATPases VAB027_466 SM00851 MGS-like domain VAB027_468 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_468 SM00387 Histidine kinase-like ATPases VAB027_468 SM00388 His Kinase A (phosphoacceptor) domain VAB027_468 SM00448 cheY-homologous receiver domain VAB027_472 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_472 SM00387 Histidine kinase-like ATPases VAB027_472 SM00388 His Kinase A (phosphoacceptor) domain VAB027_474 SM00448 cheY-homologous receiver domain VAB027_476 SM00495 Chitin-binding domain type 3 VAB027_476 SM00636 VAB027_476 VAB027_478 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VAB027_478 SM00267 diguanylate cyclase VAB027_483 SM00822 VAB027_483 VAB027_487 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_491 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VAB027_494 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_494 SM00387 Histidine kinase-like ATPases VAB027_495 SM00421 helix_turn_helix, Lux Regulon VAB027_495 SM00448 cheY-homologous receiver domain VAB027_496 SM00354 helix_turn _helix lactose operon repressor VAB027_504 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_504 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_508 SM00091 PAS domain VAB027_508 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_511 SM00640 Glycosyl hydrolases family 32 VAB027_512 SM00354 helix_turn _helix lactose operon repressor VAB027_520 SM00563 Phosphate acyltransferases VAB027_522 SM00450 Rhodanese Homology Domain VAB027_524 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VAB027_543 SM00861 Transketolase, pyrimidine binding domain VAB027_546 SM00450 Rhodanese Homology Domain VAB027_549 SM00852 Probable molybdopterin binding domain VAB027_563 SM00382 ATPases associated with a variety of cellular activities VAB027_565 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAB027_565 SM00866 VAB027_565 VAB027_575 SM00382 ATPases associated with a variety of cellular activities VAB027_58 SM00876 Biotin and Thiamin Synthesis associated domain VAB027_588 SM00881 CoA binding domain VAB027_593 SM01321 VAB027_593 VAB027_597 SM00448 cheY-homologous receiver domain VAB027_597 SM00862 Transcriptional regulatory protein, C terminal VAB027_598 SM00387 Histidine kinase-like ATPases VAB027_598 SM00388 His Kinase A (phosphoacceptor) domain VAB027_600 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VAB027_600 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VAB027_604 SM00267 diguanylate cyclase VAB027_607 SM00062 Bacterial periplasmic substrate-binding proteins VAB027_607 SM00267 diguanylate cyclase VAB027_613 SM00782 PhnA Zinc-Ribbon VAB027_620 SM00116 Domain in cystathionine beta-synthase and other proteins. VAB027_621 SM00867 YceI-like domain VAB027_624 SM00052 Putative diguanylate phosphodiesterase VAB027_628 SM00448 cheY-homologous receiver domain VAB027_628 SM00862 Transcriptional regulatory protein, C terminal VAB027_629 SM00387 Histidine kinase-like ATPases VAB027_629 SM00388 His Kinase A (phosphoacceptor) domain VAB027_63 SM00344 helix_turn_helix ASNC type VAB027_630 SM00890 Domain of unknown function VAB027_633 SM00833 Cobalamin synthesis protein cobW C-terminal domain VAB027_637 SM00387 Histidine kinase-like ATPases VAB027_637 SM00448 cheY-homologous receiver domain VAB027_64 SM00052 Putative diguanylate phosphodiesterase VAB027_64 SM00091 PAS domain VAB027_64 SM00267 diguanylate cyclase VAB027_640 SM00354 helix_turn _helix lactose operon repressor VAB027_704 SM00360 RNA recognition motif VAB027_712 SM00871 Bacterial transcription activator, effector binding domain VAB027_739 SM00530 Helix-turn-helix XRE-family like proteins VAB027_772 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VAB027_774 SM00530 Helix-turn-helix XRE-family like proteins VAB027_779 SM01057 Eukaryotic-type carbonic anhydrase VAB027_782 SM00936 Penicillin-binding protein 5, C-terminal domain VAB027_784 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_784 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_789 SM00422 helix_turn_helix, mercury resistance VAB027_794 SM00387 Histidine kinase-like ATPases VAB027_794 SM00388 His Kinase A (phosphoacceptor) domain VAB027_795 SM00448 cheY-homologous receiver domain VAB027_795 SM00862 Transcriptional regulatory protein, C terminal VAB027_800 SM00420 helix_turn_helix, Deoxyribose operon repressor VAB027_800 SM01134 VAB027_800 VAB027_803 SM01007 Class II Aldolase and Adducin N-terminal domain VAB027_805 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VAB027_808 SM00448 cheY-homologous receiver domain VAB027_808 SM00862 Transcriptional regulatory protein, C terminal VAB027_809 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_809 SM00387 Histidine kinase-like ATPases VAB027_809 SM00388 His Kinase A (phosphoacceptor) domain VAB027_815 SM00342 helix_turn_helix, arabinose operon control protein VAB027_816 SM00382 ATPases associated with a variety of cellular activities VAB027_822 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VAB027_825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_826 SM00458 Ricin-type beta-trefoil VAB027_830 SM00267 diguanylate cyclase VAB027_834 SM00387 Histidine kinase-like ATPases VAB027_835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAB027_84 SM00563 Phosphate acyltransferases VAB027_840 SM00487 DEAD-like helicases superfamily VAB027_840 SM00490 helicase superfamily c-terminal domain VAB027_841 SM00487 DEAD-like helicases superfamily VAB027_841 SM00490 helicase superfamily c-terminal domain VAB027_843 SM01240 VAB027_843 VAB027_850 SM00448 cheY-homologous receiver domain VAB027_854 SM00357 Cold shock protein domain VAB027_857 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VAB027_857 SM00382 ATPases associated with a variety of cellular activities VAB027_862 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_862 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_866 SM00327 von Willebrand factor (vWF) type A domain VAB027_867 SM00028 Tetratricopeptide repeats VAB027_870 SM00357 Cold shock protein domain VAB027_871 SM00267 diguanylate cyclase VAB027_88 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VAB027_88 SM00091 PAS domain VAB027_88 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_890 SM00382 ATPases associated with a variety of cellular activities VAB027_890 SM00448 cheY-homologous receiver domain VAB027_891 SM00091 PAS domain VAB027_891 SM00387 Histidine kinase-like ATPases VAB027_891 SM00388 His Kinase A (phosphoacceptor) domain VAB027_892 SM00495 Chitin-binding domain type 3 VAB027_896 SM00100 Cyclic nucleotide-monophosphate binding domain VAB027_899 SM00354 helix_turn _helix lactose operon repressor VAB027_90 SM00450 Rhodanese Homology Domain VAB027_903 SM00382 ATPases associated with a variety of cellular activities VAB027_912 SM00382 ATPases associated with a variety of cellular activities VAB027_913 SM00382 ATPases associated with a variety of cellular activities VAB027_913 SM01086 C-terminal, D2-small domain, of ClpB protein VAB027_92 SM01004 Delta-aminolevulinic acid dehydratase VAB027_928 SM00052 Putative diguanylate phosphodiesterase VAB027_929 SM00450 Rhodanese Homology Domain VAB027_94 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VAB027_94 SM00474 3'-5' exonuclease VAB027_94 SM00475 5'-3' exonuclease VAB027_94 SM00482 DNA polymerase A domain VAB027_942 SM00422 helix_turn_helix, mercury resistance VAB027_946 SM00052 Putative diguanylate phosphodiesterase VAB027_946 SM00267 diguanylate cyclase VAB027_952 SM00267 diguanylate cyclase VAB027_953 SM00382 ATPases associated with a variety of cellular activities VAB027_957 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_957 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAB027_963 SM00487 DEAD-like helicases superfamily VAB027_963 SM00490 helicase superfamily c-terminal domain VAB027_966 SM00257 Lysin motif VAB027_968 SM00422 helix_turn_helix, mercury resistance VAB027_972 SM00028 Tetratricopeptide repeats VAB027_973 SM00267 diguanylate cyclase VAB027_974 SM00245 tail specific protease VAB027_984 SM00014 Acid phosphatase homologues VAB027_988 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAB027_988 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain