VAB027_2361 7d718d759eed108068956053667cf3ab 445 Pfam PF17192 MukF middle domain 126 286 2.3E-80 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VAB027_2361 7d718d759eed108068956053667cf3ab 445 Pfam PF03882 MukF winged-helix domain 10 122 1.3E-55 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VAB027_2361 7d718d759eed108068956053667cf3ab 445 Gene3D G3DSA:1.20.58.590 124 316 9.9E-80 T 14-10-2018 IPR036141 MukF, middle domain superfamily VAB027_2361 7d718d759eed108068956053667cf3ab 445 Gene3D G3DSA:1.10.10.10 29 123 1.3E-47 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2361 7d718d759eed108068956053667cf3ab 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 53.469 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VAB027_2361 7d718d759eed108068956053667cf3ab 445 Gene3D G3DSA:1.10.225.40 358 445 2.4E-37 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily VAB027_2361 7d718d759eed108068956053667cf3ab 445 PIRSF PIRSF018282 1 445 8.9E-243 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VAB027_2361 7d718d759eed108068956053667cf3ab 445 Pfam PF17193 MukF C-terminal domain 288 445 4.6E-78 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VAB027_2361 7d718d759eed108068956053667cf3ab 445 SUPERFAMILY SSF140570 124 286 1.57E-78 T 14-10-2018 IPR036141 MukF, middle domain superfamily VAB027_2361 7d718d759eed108068956053667cf3ab 445 SUPERFAMILY SSF46785 13 123 6.8E-46 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3508 d5930d93633086f1ca342332a5204fa8 204 SUPERFAMILY SSF46689 2 65 1.41E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3508 d5930d93633086f1ca342332a5204fa8 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 45 2.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3508 d5930d93633086f1ca342332a5204fa8 204 Gene3D G3DSA:1.10.357.10 1 203 5.6E-61 T 14-10-2018 VAB027_3508 d5930d93633086f1ca342332a5204fa8 204 Pfam PF13972 Bacterial transcriptional repressor 50 192 3.2E-42 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR VAB027_2241 95784b41abfecb3147be6732b3190132 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 350 7.7E-183 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAB027_2241 95784b41abfecb3147be6732b3190132 354 SUPERFAMILY SSF54197 181 350 1.87E-53 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2241 95784b41abfecb3147be6732b3190132 354 SUPERFAMILY SSF54197 6 179 4.36E-71 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2241 95784b41abfecb3147be6732b3190132 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 3.2E-63 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAB027_2241 95784b41abfecb3147be6732b3190132 354 Gene3D G3DSA:3.30.428.10 178 354 4.7E-70 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2241 95784b41abfecb3147be6732b3190132 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAB027_2241 95784b41abfecb3147be6732b3190132 354 Gene3D G3DSA:3.30.428.10 46 177 1.9E-54 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2241 95784b41abfecb3147be6732b3190132 354 PIRSF PIRSF000808 2 345 2.9E-121 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAB027_2241 95784b41abfecb3147be6732b3190132 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 8.7E-66 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAB027_13 47d125fd0b4158de2bb33deba3170695 82 Gene3D G3DSA:3.30.110.40 4 80 3.9E-27 T 14-10-2018 IPR036868 TusA-like domain superfamily VAB027_13 47d125fd0b4158de2bb33deba3170695 82 Pfam PF01206 Sulfurtransferase TusA 10 79 2.5E-21 T 14-10-2018 IPR001455 TusA-like domain VAB027_13 47d125fd0b4158de2bb33deba3170695 82 SUPERFAMILY SSF64307 8 79 3.53E-23 T 14-10-2018 IPR036868 TusA-like domain superfamily VAB027_13 47d125fd0b4158de2bb33deba3170695 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.092 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VAB027_13 47d125fd0b4158de2bb33deba3170695 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.4E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Gene3D G3DSA:3.40.50.300 110 275 3.6E-116 T 14-10-2018 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.087 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 1.4E-303 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Gene3D G3DSA:3.30.70.3280 390 529 2.3E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.1E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Gene3D G3DSA:3.40.50.300 72 379 3.6E-116 T 14-10-2018 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 SUPERFAMILY SSF54980 393 468 3.02E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 153 4.8E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 SUPERFAMILY SSF52540 10 278 8.54E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 SUPERFAMILY SSF50447 262 393 3.06E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3187 d03a6024e5024adb520619f91cf7c255 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.2E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 Gene3D G3DSA:1.10.455.10 2 155 9.6E-65 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.981 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.6E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.2E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 PIRSF PIRSF002122 3 156 1.1E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VAB027_3472 ea3ab3d59116ac343651547bf9509594 156 SUPERFAMILY SSF47973 6 149 1.7E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 SMART SM00382 166 303 5.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 Gene3D G3DSA:1.10.8.60 312 382 3.6E-23 T 14-10-2018 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 SUPERFAMILY SSF52172 26 190 6.76E-7 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 Gene3D G3DSA:1.10.10.60 387 440 1.5E-12 T 14-10-2018 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 8.8E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 SUPERFAMILY SSF46689 350 438 1.87E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 Gene3D G3DSA:3.40.50.300 145 310 9.7E-43 T 14-10-2018 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 5.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 5.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 SUPERFAMILY SSF52540 146 375 2.16E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3180 d0ed5bf75f0889c0da19497cffa998b1 444 Pfam PF00158 Sigma-54 interaction domain 146 305 1.7E-40 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 SMART SM00487 28 234 3.7E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 SMART SM00490 270 351 1.9E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 SUPERFAMILY SSF52540 85 363 9.0E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 Gene3D G3DSA:3.40.50.300 229 393 1.7E-46 T 14-10-2018 VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 Gene3D G3DSA:3.40.50.300 2 222 8.0E-72 T 14-10-2018 VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.429 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 Pfam PF00271 Helicase conserved C-terminal domain 245 351 1.0E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_3542 80fd39a509c68d41d5d10c03cfe8d8a7 438 Pfam PF00270 DEAD/DEAH box helicase 33 207 6.9E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 SMART SM00316 37 119 7.4E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 SUPERFAMILY SSF50249 40 124 1.41E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 Hamap MF_00970 Ribonuclease E [rne]. 1 1039 35.98 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 Pfam PF10150 Ribonuclease E/G family 121 390 2.0E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 Gene3D G3DSA:2.40.50.140 32 125 6.1E-32 T 14-10-2018 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 6.1E-171 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 Pfam PF00575 S1 RNA binding domain 37 118 9.5E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2667 ca9904f63d2a43aa1b93dc30693505b1 1052 Gene3D G3DSA:3.40.1260.20 400 508 2.5E-40 T 14-10-2018 VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 SUPERFAMILY SSF103190 39 187 4.94E-23 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 SUPERFAMILY SSF103190 188 279 7.61E-17 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 SMART SM00267 435 600 1.2E-47 T 14-10-2018 IPR000160 GGDEF domain VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 SMART SM00086 393 435 5.7E-6 T 14-10-2018 IPR001610 PAC motif VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 Pfam PF00990 Diguanylate cyclase, GGDEF domain 448 596 8.8E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 Pfam PF13426 PAS domain 333 433 2.1E-14 T 14-10-2018 IPR000014 PAS domain VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 SUPERFAMILY SSF55785 333 432 1.15E-23 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 Gene3D G3DSA:3.30.70.270 445 607 4.4E-47 T 14-10-2018 VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 SUPERFAMILY SSF55073 451 599 2.9E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 325 442 8.1E-19 T 14-10-2018 IPR000014 PAS domain VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 Gene3D G3DSA:3.30.450.20 312 444 2.1E-28 T 14-10-2018 VAB027_478 ae7beed682216bcf7b363581d5da4f2e 609 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 444 599 1.6E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 Gene3D G3DSA:2.40.50.100 21 86 1.1E-31 T 14-10-2018 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.4E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.3E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.3E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.3E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.389 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 SUPERFAMILY SSF110324 2 80 8.72E-35 T 14-10-2018 VAB027_3395 b69a70c0fe18d07231884be99fa864bd 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.5E-43 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3163 aa69bbbfda5f4318ed354baf85bf8608 144 SUPERFAMILY SSF54534 4 143 5.5E-39 T 14-10-2018 VAB027_3163 aa69bbbfda5f4318ed354baf85bf8608 144 Gene3D G3DSA:3.10.50.40 13 141 1.6E-42 T 14-10-2018 VAB027_3163 aa69bbbfda5f4318ed354baf85bf8608 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 140 5.7E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAB027_3163 aa69bbbfda5f4318ed354baf85bf8608 144 Gene3D G3DSA:2.40.10.330 72 129 1.6E-42 T 14-10-2018 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 Gene3D G3DSA:1.20.1250.20 241 451 4.7E-62 T 14-10-2018 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 Gene3D G3DSA:1.20.1250.20 18 227 1.7E-58 T 14-10-2018 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 SUPERFAMILY SSF103473 16 440 3.27E-86 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 1.5E-238 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 PIRSF PIRSF002808 5 451 1.2E-170 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 1.4E-152 T 14-10-2018 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 Pfam PF07690 Major Facilitator Superfamily 34 401 2.5E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_894 9df69bc9a1d0f162b9fbf40201d7e4d2 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Gene3D G3DSA:3.30.1360.30 271 420 1.7E-197 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Pfam PF02938 GAD domain 307 406 1.5E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 7.6E-106 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.1E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 SUPERFAMILY SSF55681 108 582 1.05E-102 T 14-10-2018 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 SUPERFAMILY SSF50249 1 105 5.52E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 SUPERFAMILY SSF55261 288 419 4.74E-47 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Gene3D G3DSA:2.40.50.140 1 106 2.2E-35 T 14-10-2018 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Gene3D G3DSA:3.30.930.10 118 578 1.7E-197 T 14-10-2018 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.461 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VAB027_1846 87a26eb38d1e090b610c694e7709963c 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 1.4E-265 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 Pfam PF00072 Response regulator receiver domain 11 118 9.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 SUPERFAMILY SSF52172 8 164 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 Pfam PF13487 HD domain 281 329 2.0E-12 T 14-10-2018 VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 Gene3D G3DSA:1.10.3210.10 191 388 6.8E-30 T 14-10-2018 VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 SUPERFAMILY SSF109604 209 377 4.4E-13 T 14-10-2018 VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 Gene3D G3DSA:3.40.50.2300 2 146 2.4E-33 T 14-10-2018 VAB027_1769 eaf540731c8ae14a1c512121a6411827 445 SMART SM00448 9 120 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82866 782 1008 1.96E-47 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:1.20.1640.10 501 1001 4.0E-288 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.2090.10 178 268 4.0E-288 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1430 555 647 4.0E-288 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1440 648 843 4.0E-288 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82714 701 783 7.85E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.0E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.2090.10 698 786 4.0E-288 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 2.9E-275 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82693 553 650 7.85E-20 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82693 136 323 3.79E-21 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1320 134 325 4.0E-288 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82866 290 489 2.22E-47 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82714 182 263 1.83E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 SUPERFAMILY SSF82693 41 130 3.66E-23 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:3.30.70.1430 40 794 4.0E-288 T 14-10-2018 VAB027_3697 e3ce721d03da919a6540c748429d186d 1036 Gene3D G3DSA:1.20.1640.10 10 500 4.0E-288 T 14-10-2018 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 SUPERFAMILY SSF46557 2 75 5.36E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 SUPERFAMILY SSF54534 81 156 8.37E-24 T 14-10-2018 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 Gene3D G3DSA:3.10.50.30 75 157 4.8E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.066 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.4E-52 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.0E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 8.7E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 PIRSF PIRSF006092 1 157 1.7E-46 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VAB027_3215 cc46218b6d2f4a31135dacf7bf214cdb 157 Gene3D G3DSA:1.10.287.180 1 74 7.7E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAB027_2607 8418f25200a0f65d4bd3303dbb08f920 476 Pfam PF00501 AMP-binding enzyme 15 374 3.1E-54 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_2607 8418f25200a0f65d4bd3303dbb08f920 476 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 32 461 5.5E-164 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VAB027_2607 8418f25200a0f65d4bd3303dbb08f920 476 Gene3D G3DSA:3.40.50.12780 8 370 9.0E-67 T 14-10-2018 VAB027_2607 8418f25200a0f65d4bd3303dbb08f920 476 SUPERFAMILY SSF56801 8 468 8.63E-88 T 14-10-2018 VAB027_2607 8418f25200a0f65d4bd3303dbb08f920 476 Gene3D G3DSA:3.30.300.30 371 450 1.3E-13 T 14-10-2018 VAB027_2607 8418f25200a0f65d4bd3303dbb08f920 476 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_3387 9773ab6bb5b441d24b16ca3ed4e046a6 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 2.3E-129 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VAB027_3387 9773ab6bb5b441d24b16ca3ed4e046a6 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 36.512 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VAB027_3387 9773ab6bb5b441d24b16ca3ed4e046a6 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 6.9E-107 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VAB027_3387 9773ab6bb5b441d24b16ca3ed4e046a6 330 SUPERFAMILY SSF53659 3 326 2.08E-112 T 14-10-2018 VAB027_3387 9773ab6bb5b441d24b16ca3ed4e046a6 330 Gene3D G3DSA:3.40.718.10 1 329 1.2E-123 T 14-10-2018 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 SUPERFAMILY SSF52402 174 372 1.19E-42 T 14-10-2018 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 3.1E-109 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 Gene3D G3DSA:3.30.2130.30 1 174 1.6E-30 T 14-10-2018 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 483 8.3E-40 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 SMART SM00981 75 165 3.6E-20 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 Pfam PF02926 THUMP domain 52 157 2.3E-21 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 Gene3D G3DSA:3.40.50.620 175 397 6.9E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.9E-72 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 Gene3D G3DSA:3.40.250.10 398 483 2.5E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 219.246 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 SUPERFAMILY SSF143437 1 173 2.96E-45 T 14-10-2018 VAB027_1531 7c00653eeb0d8761bc43a18d8b914431 483 SUPERFAMILY SSF52821 399 482 4.25E-13 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_3681 75a3091fd60bb2d42461695a46cae92c 292 SUPERFAMILY SSF53335 9 265 1.44E-95 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3681 75a3091fd60bb2d42461695a46cae92c 292 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_3681 75a3091fd60bb2d42461695a46cae92c 292 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.711 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VAB027_3681 75a3091fd60bb2d42461695a46cae92c 292 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 267 6.0E-116 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VAB027_3681 75a3091fd60bb2d42461695a46cae92c 292 Gene3D G3DSA:3.40.50.150 1 283 7.5E-115 T 14-10-2018 VAB027_420 f1ae72158d6f1e6e7aa83889d97f5a15 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 1.8E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_420 f1ae72158d6f1e6e7aa83889d97f5a15 222 Gene3D G3DSA:1.10.3720.10 3 217 5.6E-41 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_420 f1ae72158d6f1e6e7aa83889d97f5a15 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 214 1.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_420 f1ae72158d6f1e6e7aa83889d97f5a15 222 SUPERFAMILY SSF161098 9 202 1.83E-31 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3342 3bda84781d51a8282db58278339931a4 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 6.6E-104 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VAB027_3342 3bda84781d51a8282db58278339931a4 298 Gene3D G3DSA:1.10.10.10 2 85 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3342 3bda84781d51a8282db58278339931a4 298 Pfam PF03466 LysR substrate binding domain 97 258 7.9E-12 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3342 3bda84781d51a8282db58278339931a4 298 Gene3D G3DSA:3.40.190.290 89 296 1.4E-64 T 14-10-2018 VAB027_3342 3bda84781d51a8282db58278339931a4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3342 3bda84781d51a8282db58278339931a4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3342 3bda84781d51a8282db58278339931a4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3342 3bda84781d51a8282db58278339931a4 298 SUPERFAMILY SSF46785 4 112 8.71E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3342 3bda84781d51a8282db58278339931a4 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 59.913 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VAB027_3342 3bda84781d51a8282db58278339931a4 298 SUPERFAMILY SSF53850 96 292 1.99E-21 T 14-10-2018 VAB027_3342 3bda84781d51a8282db58278339931a4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 SUPERFAMILY SSF51246 317 389 1.88E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 SUPERFAMILY SSF56059 111 313 3.71E-57 T 14-10-2018 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.035 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 1.1E-197 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 Gene3D G3DSA:3.40.50.20 1 120 1.7E-53 T 14-10-2018 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 SUPERFAMILY SSF52440 2 110 1.31E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 Gene3D G3DSA:3.30.470.20 195 389 1.5E-60 T 14-10-2018 VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 Pfam PF02222 ATP-grasp domain 121 293 3.1E-57 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VAB027_1908 4764e4aa7da55f30cfa044eb4e71b7fa 391 Gene3D G3DSA:3.30.1490.20 121 194 3.1E-33 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_3265 45d450c8b3b2ce185d2486f88d86e7b7 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 33.769 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VAB027_3265 45d450c8b3b2ce185d2486f88d86e7b7 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 14-10-2018 VAB027_3265 45d450c8b3b2ce185d2486f88d86e7b7 196 Pfam PF13580 SIS domain 9 144 1.4E-34 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_3265 45d450c8b3b2ce185d2486f88d86e7b7 196 Gene3D G3DSA:3.40.50.10490 1 195 3.7E-71 T 14-10-2018 VAB027_3586 71a7a640c2f6ec8db1a5a793306199b6 646 Pfam PF13727 CoA-binding domain 69 238 9.8E-8 T 14-10-2018 VAB027_3586 71a7a640c2f6ec8db1a5a793306199b6 646 SUPERFAMILY SSF51735 143 269 5.51E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3586 71a7a640c2f6ec8db1a5a793306199b6 646 Gene3D G3DSA:3.40.50.720 141 264 1.9E-33 T 14-10-2018 VAB027_3586 71a7a640c2f6ec8db1a5a793306199b6 646 SUPERFAMILY SSF51735 280 559 4.0E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3586 71a7a640c2f6ec8db1a5a793306199b6 646 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 1.4E-128 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VAB027_3586 71a7a640c2f6ec8db1a5a793306199b6 646 Gene3D G3DSA:3.40.50.720 279 619 2.1E-113 T 14-10-2018 VAB027_3714 6e60a9d8bda3bfca7a5166474d9b15ed 301 Pfam PF03466 LysR substrate binding domain 89 288 4.1E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3714 6e60a9d8bda3bfca7a5166474d9b15ed 301 SUPERFAMILY SSF46785 5 86 1.9E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3714 6e60a9d8bda3bfca7a5166474d9b15ed 301 Gene3D G3DSA:3.40.190.290 93 289 1.7E-15 T 14-10-2018 VAB027_3714 6e60a9d8bda3bfca7a5166474d9b15ed 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3714 6e60a9d8bda3bfca7a5166474d9b15ed 301 SUPERFAMILY SSF53850 89 288 1.32E-22 T 14-10-2018 VAB027_3714 6e60a9d8bda3bfca7a5166474d9b15ed 301 Gene3D G3DSA:1.10.10.10 1 89 5.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 Pfam PF12848 ABC transporter 217 295 2.1E-28 T 14-10-2018 IPR032781 ABC-transporter extension domain VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 Pfam PF00005 ABC transporter 328 459 6.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 Pfam PF09496 Cenp-O kinetochore centromere component 534 627 3.6E-4 T 14-10-2018 IPR018464 Centromere protein O GO:0000776|GO:0034508 Reactome: R-HSA-141444|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-5663220|Reactome: R-HSA-606279|Reactome: R-HSA-68877 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 Pfam PF00005 ABC transporter 17 178 3.2E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 SUPERFAMILY SSF52540 277 494 5.97E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 Gene3D G3DSA:3.40.50.300 7 273 6.4E-60 T 14-10-2018 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 Gene3D G3DSA:3.40.50.300 276 540 6.7E-54 T 14-10-2018 VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 SUPERFAMILY SSF52540 2 255 1.15E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 SMART SM00382 337 503 4.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1261 039cf1826118219cd1b04d3d414f05f8 638 SMART SM00382 26 223 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1610 f417820fd2f65e918ccb2ec523753d5e 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 148 1.6E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_1610 f417820fd2f65e918ccb2ec523753d5e 184 SUPERFAMILY SSF51161 29 167 5.96E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_1610 f417820fd2f65e918ccb2ec523753d5e 184 Gene3D G3DSA:2.160.10.10 69 178 1.4E-28 T 14-10-2018 VAB027_1610 f417820fd2f65e918ccb2ec523753d5e 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 123 151 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SUPERFAMILY SSF55785 151 275 2.37E-19 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Pfam PF13426 PAS domain 177 276 3.4E-12 T 14-10-2018 IPR000014 PAS domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SMART SM00267 277 449 4.3E-42 T 14-10-2018 IPR000160 GGDEF domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 447 3.0E-30 T 14-10-2018 IPR000160 GGDEF domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SMART SM00091 166 232 2.1E-4 T 14-10-2018 IPR000014 PAS domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SMART SM00091 43 110 5.9 T 14-10-2018 IPR000014 PAS domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SUPERFAMILY SSF55785 32 152 1.08E-7 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Pfam PF00563 EAL domain 469 703 7.9E-61 T 14-10-2018 IPR001633 EAL domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Gene3D G3DSA:3.20.20.450 450 711 8.7E-80 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SUPERFAMILY SSF141868 467 711 6.41E-72 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 163 283 7.8E-15 T 14-10-2018 IPR000014 PAS domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SUPERFAMILY SSF55073 293 450 6.67E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 445 6.2E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 SMART SM00052 461 708 1.2E-72 T 14-10-2018 IPR001633 EAL domain VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Gene3D G3DSA:3.30.70.270 279 449 8.7E-43 T 14-10-2018 VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Gene3D G3DSA:3.30.450.20 31 165 1.3E-8 T 14-10-2018 VAB027_64 5aefbb00867509f2fafa916bc8ba4271 718 Gene3D G3DSA:3.30.450.20 166 278 5.5E-18 T 14-10-2018 VAB027_2037 20bd30319ed449bb2a65b1fb1fe78f59 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 6.1E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2037 20bd30319ed449bb2a65b1fb1fe78f59 401 SUPERFAMILY SSF161098 193 382 1.96E-25 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2037 20bd30319ed449bb2a65b1fb1fe78f59 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 6.7E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_2037 20bd30319ed449bb2a65b1fb1fe78f59 401 Gene3D G3DSA:1.10.3720.10 79 186 4.9E-14 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2037 20bd30319ed449bb2a65b1fb1fe78f59 401 Gene3D G3DSA:1.10.3720.10 188 397 1.1E-32 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2037 20bd30319ed449bb2a65b1fb1fe78f59 401 SUPERFAMILY SSF161098 91 161 8.24E-12 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 SUPERFAMILY SSF53927 8 150 3.39E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 361 1.0E-57 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 Pfam PF01872 RibD C-terminal domain 152 356 2.5E-48 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 5.4E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 Gene3D G3DSA:3.40.430.10 141 366 7.7E-67 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 Gene3D G3DSA:3.40.140.10 3 140 6.1E-45 T 14-10-2018 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 PIRSF PIRSF006769 3 366 3.0E-122 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 SUPERFAMILY SSF53597 149 360 1.12E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAB027_2911 e3d95e978494d176bb0dec6e922c06c7 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 2.4E-128 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 SUPERFAMILY SSF52335 2 150 3.43E-57 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 5.3E-65 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 Pfam PF02142 MGS-like domain 26 118 4.7E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 Gene3D G3DSA:3.40.50.1380 1 151 1.0E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.81 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 PIRSF PIRSF006614 8 151 7.2E-65 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAB027_466 e2263b9b7fc38334eb3ec4967d2cb578 151 SMART SM00851 25 118 2.2E-22 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VAB027_2115 51532b15da5080cdd93af52e95913cbf 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 1.6E-228 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VAB027_2115 51532b15da5080cdd93af52e95913cbf 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 6.6E-115 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2115 51532b15da5080cdd93af52e95913cbf 475 SUPERFAMILY SSF81442 9 465 5.1E-122 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2115 51532b15da5080cdd93af52e95913cbf 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2115 51532b15da5080cdd93af52e95913cbf 475 Gene3D G3DSA:1.20.210.10 4 472 6.4E-205 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 Gene3D G3DSA:3.40.50.1000 5 186 4.9E-52 T 14-10-2018 IPR023214 HAD superfamily VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 1.2E-34 T 14-10-2018 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 Gene3D G3DSA:1.10.150.240 17 80 4.9E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 SUPERFAMILY SSF56784 1 212 7.57E-53 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_927 90ce8887dbbab17f5cf10f731f13690c 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 182 2.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Gene3D G3DSA:3.30.1370.120 259 344 7.5E-16 T 14-10-2018 IPR038591 NolW-like superfamily VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 621 5.2E-159 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Gene3D G3DSA:3.30.1370.120 189 258 1.1E-21 T 14-10-2018 IPR038591 NolW-like superfamily VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Pfam PF00263 Bacterial type II and III secretion system protein 450 612 2.0E-50 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 599 613 2.2E-37 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 2.2E-37 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 594 2.2E-37 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 2.2E-37 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 2.2E-37 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 557 590 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 7.4E-16 T 14-10-2018 IPR005644 NolW-like VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 1.9E-8 T 14-10-2018 IPR005644 NolW-like VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Pfam PF03958 Bacterial type II/III secretion system short domain 267 343 7.3E-16 T 14-10-2018 IPR005644 NolW-like VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 Gene3D G3DSA:3.30.1370.120 20 186 5.0E-54 T 14-10-2018 IPR038591 NolW-like superfamily VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR01032 Gene IV protein signature 592 614 2.6E-12 T 14-10-2018 VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR01032 Gene IV protein signature 471 494 2.6E-12 T 14-10-2018 VAB027_160 6719eddfdd01c0fe8ad28adcb6b92792 675 PRINTS PR01032 Gene IV protein signature 539 567 2.6E-12 T 14-10-2018 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 361 4.9E-163 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 PIRSF PIRSF000524 1 366 4.3E-59 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 Gene3D G3DSA:3.90.1150.10 8 353 7.0E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 3.1E-191 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 SUPERFAMILY SSF53383 3 362 8.84E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 212.938 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 Gene3D G3DSA:3.40.640.10 16 262 7.0E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_560 21e499617d84f79b32eed5f5a67389c2 367 Pfam PF00266 Aminotransferase class-V 37 315 9.9E-31 T 14-10-2018 IPR000192 Aminotransferase class V domain VAB027_2717 37a86721da548841dea95133af78d978 294 Gene3D G3DSA:3.40.50.1980 22 180 1.9E-45 T 14-10-2018 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 281 294 2.7E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 45 63 2.7E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 64 83 2.7E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 124 143 2.7E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VAB027_2717 37a86721da548841dea95133af78d978 294 SUPERFAMILY SSF53807 13 292 4.71E-70 T 14-10-2018 VAB027_2717 37a86721da548841dea95133af78d978 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 287 9.3E-52 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VAB027_2717 37a86721da548841dea95133af78d978 294 Gene3D G3DSA:3.40.50.1980 181 294 4.6E-39 T 14-10-2018 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00690 Adhesin family signature 51 64 2.3E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00690 Adhesin family signature 180 201 2.3E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VAB027_2717 37a86721da548841dea95133af78d978 294 PRINTS PR00690 Adhesin family signature 64 81 2.3E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 Gene3D G3DSA:1.10.760.10 19 107 3.9E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 SUPERFAMILY SSF46626 114 203 3.2E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 2.2E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 2.2E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 SUPERFAMILY SSF46626 6 105 5.3E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 PIRSF PIRSF000005 1 205 4.0E-63 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 Pfam PF00034 Cytochrome c 116 201 5.1E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 Pfam PF00034 Cytochrome c 31 103 6.1E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_96 2162633f7453fc700e36818e1c9845a5 205 Gene3D G3DSA:1.10.760.10 109 205 1.3E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 SUPERFAMILY SSF52540 331 580 2.71E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 SMART SM00382 368 561 1.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 Gene3D G3DSA:3.40.50.300 329 581 3.0E-98 T 14-10-2018 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 SUPERFAMILY SSF90123 14 327 2.09E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 4.9E-249 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 Pfam PF00664 ABC transporter transmembrane region 28 293 2.0E-56 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 Gene3D G3DSA:1.20.1560.10 2 328 1.9E-81 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2523 d0de5b00880d2752ccb706e9936d2497 582 Pfam PF00005 ABC transporter 359 509 1.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 189 438 1.1E-30 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.300.30 1295 1404 9.1E-26 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 922 1324 3.3E-104 T 14-10-2018 IPR010071 Amino acid adenylation domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.30 2133 2374 3.8E-63 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:1.10.1200.10 1852 1931 1.3E-14 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 1951 2130 1.26E-31 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1043 1054 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.10 1950 2330 3.8E-63 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF56801 882 1398 3.66E-123 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 2135 2388 5.11E-28 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 453 646 1.33E-13 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 4 180 6.0E-20 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SMART SM00823 Phosphopantetheine attachment site 1862 1931 0.0078 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.10 2 181 7.3E-40 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.10 450 619 2.8E-24 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF00668 Condensation domain 457 866 7.6E-12 T 14-10-2018 IPR001242 Condensation domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF00668 Condensation domain 27 440 1.1E-32 T 14-10-2018 IPR001242 Condensation domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF00668 Condensation domain 1422 1570 6.9E-8 T 14-10-2018 IPR001242 Condensation domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF00668 Condensation domain 1948 2383 1.0E-44 T 14-10-2018 IPR001242 Condensation domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF13193 AMP-binding enzyme C-terminal domain 1309 1383 2.3E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF00501 AMP-binding enzyme 906 1300 3.4E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.40.50.12780 894 1292 4.7E-98 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 638 865 2.0E-20 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF52777 1422 1575 4.78E-18 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1886 1901 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Pfam PF00550 Phosphopantetheine attachment site 1865 1925 2.6E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.10 1416 1618 1.2E-12 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.30 633 873 3.8E-32 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 Gene3D G3DSA:3.30.559.30 186 446 3.7E-53 T 14-10-2018 VAB027_2851 3a0738c1bea06df1be925456467f677a 2413 SUPERFAMILY SSF47336 1858 1925 1.96E-12 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_3259 fa8f3a2c115e3cd32562dcb18d3913e3 222 SMART SM00947 30 192 7.5E-67 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAB027_3259 fa8f3a2c115e3cd32562dcb18d3913e3 222 Pfam PF00484 Carbonic anhydrase 38 188 1.7E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAB027_3259 fa8f3a2c115e3cd32562dcb18d3913e3 222 Gene3D G3DSA:3.40.1050.10 1 222 3.1E-94 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VAB027_3259 fa8f3a2c115e3cd32562dcb18d3913e3 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAB027_3259 fa8f3a2c115e3cd32562dcb18d3913e3 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAB027_3259 fa8f3a2c115e3cd32562dcb18d3913e3 222 SUPERFAMILY SSF53056 2 214 3.4E-75 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VAB027_2275 2d38b923446fbb014a6d8c18a6e9d76b 372 Gene3D G3DSA:2.40.370.10 251 372 5.1E-12 T 14-10-2018 IPR023374 AttH-like domain superfamily VAB027_2275 2d38b923446fbb014a6d8c18a6e9d76b 372 SUPERFAMILY SSF159245 52 372 3.01E-77 T 14-10-2018 VAB027_2275 2d38b923446fbb014a6d8c18a6e9d76b 372 Gene3D G3DSA:2.40.370.10 65 249 4.6E-43 T 14-10-2018 IPR023374 AttH-like domain superfamily VAB027_2275 2d38b923446fbb014a6d8c18a6e9d76b 372 Pfam PF07143 CrtC N-terminal lipocalin domain 76 246 2.0E-39 T 14-10-2018 IPR010791 AttH domain VAB027_2275 2d38b923446fbb014a6d8c18a6e9d76b 372 Pfam PF17186 Lipocalin-like domain 251 372 8.0E-25 T 14-10-2018 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 SMART SM00984 316 413 1.8E-21 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 410 9.9E-124 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 Gene3D G3DSA:3.40.50.720 1 204 3.1E-66 T 14-10-2018 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 412 1.9E-21 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 SUPERFAMILY SSF51735 4 199 2.52E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.2E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 Gene3D G3DSA:3.40.50.720 205 413 1.8E-59 T 14-10-2018 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 189 5.1E-59 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 PIRSF PIRSF500136 1 413 1.0E-146 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 SUPERFAMILY SSF52413 304 412 1.02E-23 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 SUPERFAMILY SSF48179 206 299 1.87E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_1609 d4471b6c24b3e2098698e1645b27f870 413 PIRSF PIRSF000124 3 413 1.8E-82 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 Pfam PF13401 AAA domain 42 171 1.6E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 Gene3D G3DSA:3.40.50.300 26 184 1.6E-14 T 14-10-2018 VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 SUPERFAMILY SSF52540 5 264 1.58E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 Gene3D G3DSA:3.90.70.10 335 451 1.4E-36 T 14-10-2018 VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 Pfam PF01471 Putative peptidoglycan binding domain 458 514 1.2E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 SMART SM00382 42 195 6.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 SUPERFAMILY SSF47090 447 521 3.4E-12 T 14-10-2018 IPR036365 PGBD-like superfamily VAB027_3072 8d4576a201cf8f2a6d805425a8bb2b03 529 Gene3D G3DSA:1.10.101.10 452 518 7.8E-21 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VAB027_1335 0d24036f76d2b2eaa04711bdadd7ecf7 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 7.5E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_1335 0d24036f76d2b2eaa04711bdadd7ecf7 148 SUPERFAMILY SSF55804 1 146 8.89E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_1335 0d24036f76d2b2eaa04711bdadd7ecf7 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.2E-52 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VAB027_1335 0d24036f76d2b2eaa04711bdadd7ecf7 148 Gene3D G3DSA:3.40.930.10 1 148 1.0E-52 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_1335 0d24036f76d2b2eaa04711bdadd7ecf7 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 9.0E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 9.0E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 9.0E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 9.0E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 9.0E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 9.0E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 Pfam PF00318 Ribosomal protein S2 9 224 1.0E-93 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 5.4E-107 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 Gene3D G3DSA:3.40.50.10490 9 219 1.3E-90 T 14-10-2018 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 SUPERFAMILY SSF52313 6 232 1.7E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.813 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2901 54c71827243dc6982e3b8708aa91faae 242 Gene3D G3DSA:1.10.287.610 103 150 1.3E-90 T 14-10-2018 VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 SMART SM00490 504 588 3.6E-23 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Gene3D G3DSA:1.10.150.20 1 40 1.7E-5 T 14-10-2018 VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 5.7E-236 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Pfam PF17191 RecG wedge domain 14 170 1.9E-20 T 14-10-2018 IPR033454 RecG, wedge domain VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Pfam PF00270 DEAD/DEAH box helicase 271 432 1.5E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 SUPERFAMILY SSF52540 215 452 5.45E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Gene3D G3DSA:2.40.50.140 46 137 1.5E-12 T 14-10-2018 VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 SUPERFAMILY SSF50249 8 173 3.08E-40 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Gene3D G3DSA:3.40.50.300 456 629 1.0E-53 T 14-10-2018 VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 SMART SM00487 264 458 2.8E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Pfam PF00271 Helicase conserved C-terminal domain 479 587 7.1E-18 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 SUPERFAMILY SSF52540 451 653 1.93E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_183 6339545a6ffe0913ca4ab6cb9b8ebfb9 692 Gene3D G3DSA:3.40.50.300 209 449 1.3E-82 T 14-10-2018 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 SUPERFAMILY SSF48150 4 207 1.38E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 PIRSF PIRSF001435 1 210 6.9E-50 T 14-10-2018 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 7.0E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 2.5E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 Gene3D G3DSA:1.10.1670.10 11 203 7.2E-79 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 SMART SM00478 38 185 1.3E-53 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.4E-89 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 SMART SM00525 186 206 1.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.675 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VAB027_1695 946fceb9ae1cebae3c7680848f7521f4 213 Gene3D G3DSA:1.10.340.30 21 132 7.2E-79 T 14-10-2018 VAB027_2622 1758298bfe8dff21b3a78d85a43f9bb3 185 PIRSF PIRSF004982 2 185 4.4E-71 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VAB027_2622 1758298bfe8dff21b3a78d85a43f9bb3 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 168 1.2E-44 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VAB027_2622 1758298bfe8dff21b3a78d85a43f9bb3 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 159 8.3E-32 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 SUPERFAMILY SSF55785 289 413 4.38E-15 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Pfam PF13426 PAS domain 310 414 2.1E-8 T 14-10-2018 IPR000014 PAS domain VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 SMART SM00091 299 366 1.6E-5 T 14-10-2018 IPR000014 PAS domain VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 670 7.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 7.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 7.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 651 7.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 671 7.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Gene3D G3DSA:1.10.287.130 432 518 5.8E-13 T 14-10-2018 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Gene3D G3DSA:3.30.450.20 44 159 1.7E-12 T 14-10-2018 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 SMART SM00387 563 673 3.4E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Pfam PF00512 His Kinase A (phospho-acceptor) domain 455 517 2.2E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 SUPERFAMILY SSF55874 525 669 4.85E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 PIRSF PIRSF036431 1 673 1.0E-213 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Gene3D G3DSA:3.30.450.20 296 431 6.5E-16 T 14-10-2018 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 SUPERFAMILY SSF47384 441 518 3.14E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 SMART SM00388 455 523 0.0088 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 Gene3D G3DSA:3.30.565.10 525 673 2.5E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_891 385c55142bd60f73c7dfdb869fb9f92d 673 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 421 7.1E-14 T 14-10-2018 IPR000014 PAS domain VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Gene3D G3DSA:3.40.50.970 366 569 3.8E-50 T 14-10-2018 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 7.3E-139 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 141 1.1E-27 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Gene3D G3DSA:3.40.50.1220 222 344 8.0E-44 T 14-10-2018 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 SUPERFAMILY SSF52518 9 191 8.03E-29 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_2611 bedeb533c71d396f899094edaca305cc 570 PIRSF PIRSF004983 3 570 2.9E-196 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 548 3.7E-6 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 SUPERFAMILY SSF52518 381 568 1.34E-25 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 33.27 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 2.2E-46 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAB027_2611 bedeb533c71d396f899094edaca305cc 570 Gene3D G3DSA:3.40.50.970 4 199 3.2E-57 T 14-10-2018 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 SUPERFAMILY SSF51569 6 303 9.16E-94 T 14-10-2018 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 SUPERFAMILY SSF89000 300 461 7.06E-45 T 14-10-2018 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 595 3.8E-279 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 Gene3D G3DSA:2.40.50.100 533 599 3.4E-25 T 14-10-2018 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 Pfam PF00364 Biotin-requiring enzyme 539 598 1.2E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 Gene3D G3DSA:3.20.20.70 1 467 8.5E-173 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 SUPERFAMILY SSF51230 523 598 2.09E-21 T 14-10-2018 IPR011053 Single hybrid motif VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 Pfam PF00682 HMGL-like 8 273 3.5E-65 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VAB027_1445 f53bcb8e926e374075d119d967e5c3cc 599 Pfam PF02436 Conserved carboxylase domain 295 501 8.0E-52 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VAB027_1529 887a84d39fad7db7c2ec7420020b6aae 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 4.6E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAB027_1529 887a84d39fad7db7c2ec7420020b6aae 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF47226 1049 1143 7.2E-10 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SMART SM00388 621 686 1.8E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF53850 8 193 5.16E-28 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SMART SM00918 236 281 3.2E-4 T 14-10-2018 IPR019594 Ionotropic glutamate receptor, L-glutamate and glycine-binding domain GO:0004970|GO:0016020 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.40.190.10 7 190 1.4E-30 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF52172 919 1050 6.55E-30 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.40.190.10 311 398 2.5E-21 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.40.190.10 76 166 1.4E-30 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SMART SM00387 733 844 1.5E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2300 904b0db90489dea20156c88dde07df79 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 797 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 822 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 841 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 769 783 2.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Pfam PF00512 His Kinase A (phospho-acceptor) domain 622 685 7.9E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 194 3.2E-23 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.40.190.10 223 434 2.5E-21 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.30.565.10 688 847 3.3E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF55874 675 844 1.1E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Pfam PF01627 Hpt domain 1049 1139 6.0E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:1.10.287.130 612 687 1.8E-17 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:1.20.120.160 1035 1145 1.9E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.40.50.2300 901 1034 9.3E-29 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF47384 606 687 1.61E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SMART SM00073 1054 1140 0.0037 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF53850 226 436 3.92E-16 T 14-10-2018 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 229 434 2.1E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 734 842 2.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SUPERFAMILY SSF55785 508 610 3.84E-5 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Pfam PF00072 Response regulator receiver domain 920 1033 2.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SMART SM00062 6 210 3.5E-11 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2300 904b0db90489dea20156c88dde07df79 1146 SMART SM00448 918 1033 6.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2300 904b0db90489dea20156c88dde07df79 1146 Gene3D G3DSA:3.30.450.20 481 611 7.9E-8 T 14-10-2018 VAB027_3416 15affc161b270b08d7ac791fe90e37a9 1286 SUPERFAMILY SSF49899 110 315 1.06E-33 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_3416 15affc161b270b08d7ac791fe90e37a9 1286 Gene3D G3DSA:2.60.120.200 328 576 1.2E-5 T 14-10-2018 VAB027_3416 15affc161b270b08d7ac791fe90e37a9 1286 Gene3D G3DSA:2.60.120.200 152 323 1.7E-32 T 14-10-2018 VAB027_3416 15affc161b270b08d7ac791fe90e37a9 1286 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 155 309 2.6E-33 T 14-10-2018 VAB027_3416 15affc161b270b08d7ac791fe90e37a9 1286 SMART SM00560 171 307 2.5E-5 T 14-10-2018 IPR006558 LamG-like jellyroll fold VAB027_3416 15affc161b270b08d7ac791fe90e37a9 1286 SUPERFAMILY SSF49899 325 580 7.21E-28 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 Gene3D G3DSA:4.10.430.10 92 135 2.7E-24 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 Gene3D G3DSA:1.10.287.1050 1 83 2.2E-29 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 SMART SM00528 88 135 6.9E-25 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 Pfam PF00816 H-NS histone family 33 129 3.6E-20 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 SUPERFAMILY SSF81273 2 58 8.83E-17 T 14-10-2018 VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 SUPERFAMILY SSF81273 93 134 6.67E-12 T 14-10-2018 VAB027_1811 041c3cd5e88a9f9cce740527ae715c12 135 PIRSF PIRSF002096 1 135 1.2E-55 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VAB027_2745 ba8f46076b3dfd85b399d48de986e1b9 175 SUPERFAMILY SSF52218 1 173 9.43E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2745 ba8f46076b3dfd85b399d48de986e1b9 175 Pfam PF03358 NADPH-dependent FMN reductase 1 133 3.7E-23 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VAB027_2745 ba8f46076b3dfd85b399d48de986e1b9 175 Gene3D G3DSA:3.40.50.360 1 175 9.6E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_1894 915c4fabb5ee50557bbb254f7b6b5fc0 185 PIRSF PIRSF000847 1 184 1.3E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VAB027_1894 915c4fabb5ee50557bbb254f7b6b5fc0 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAB027_1894 915c4fabb5ee50557bbb254f7b6b5fc0 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 1.2E-54 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VAB027_1894 915c4fabb5ee50557bbb254f7b6b5fc0 185 Gene3D G3DSA:1.20.120.1760 2 180 3.0E-17 T 14-10-2018 VAB027_1894 915c4fabb5ee50557bbb254f7b6b5fc0 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.3E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAB027_1125 0557734a58a3bd59e952317106906bd6 239 Pfam PF03591 AzlC protein 27 165 5.7E-35 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 Gene3D G3DSA:3.40.30.60 363 506 1.7E-54 T 14-10-2018 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 Pfam PF00771 FHIPEP family 32 687 6.1E-271 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PIRSF PIRSF005419 10 697 7.7E-255 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 Gene3D G3DSA:1.10.490.80 598 695 1.2E-14 T 14-10-2018 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 1.2E-269 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VAB027_2707 9f7051c6384e89184500267f4d2ce572 697 Gene3D G3DSA:1.10.8.540 507 594 1.9E-23 T 14-10-2018 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 Gene3D G3DSA:3.30.450.20 1 136 1.1E-36 T 14-10-2018 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 SUPERFAMILY SSF55785 3 70 1.85E-5 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 272 2.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 Pfam PF08448 PAS fold 12 131 2.9E-6 T 14-10-2018 IPR013656 PAS fold-4 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 Gene3D G3DSA:3.30.565.10 279 435 2.0E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 SUPERFAMILY SSF55874 270 424 1.09E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.7E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.7E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.7E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.7E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 4.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 SMART SM00388 174 276 0.0016 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 Gene3D G3DSA:1.10.287.130 149 271 2.2E-24 T 14-10-2018 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 SUPERFAMILY SSF47384 169 221 2.16E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1766 3ef0eb939ab7aabb8fc25e999a023aba 439 SMART SM00387 317 426 4.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 358 1.7E-31 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Gene3D G3DSA:1.10.8.60 8 239 3.7E-101 T 14-10-2018 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.9E-44 T 14-10-2018 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Gene3D G3DSA:3.40.50.300 13 177 3.7E-101 T 14-10-2018 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 551 689 1.9E-50 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 SUPERFAMILY SSF48019 243 361 3.91E-32 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 SUPERFAMILY SSF52540 32 222 2.42E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Gene3D G3DSA:3.30.300.150 549 674 1.9E-43 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 478 549 4.7E-20 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 SMART SM00382 37 179 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.9E-131 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VAB027_1735 d9df3f072f50e13065dbd932c618aefc 692 Gene3D G3DSA:1.20.272.10 242 361 4.6E-41 T 14-10-2018 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 SUPERFAMILY SSF53633 13 262 1.96E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 374 4.7E-149 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 Pfam PF01472 PUA domain 284 358 6.3E-25 T 14-10-2018 IPR002478 PUA domain GO:0003723 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 Gene3D G3DSA:3.40.1160.10 2 272 2.0E-89 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 PIRSF PIRSF000729 7 376 1.1E-138 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 SUPERFAMILY SSF88697 284 374 4.14E-25 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 Gene3D G3DSA:2.30.130.10 273 375 7.4E-35 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 5.0E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 5.0E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 5.0E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 5.0E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 5.0E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 Pfam PF00696 Amino acid kinase family 13 241 9.1E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 268 36.374 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 SMART SM00359 284 367 1.3E-19 T 14-10-2018 IPR002478 PUA domain GO:0003723 VAB027_2914 00247cd85597fc9aa0c9036d1aa8e909 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAB027_1358 519683060f0d9882271e3d0999be5986 969 SMART SM00490 519 603 1.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1358 519683060f0d9882271e3d0999be5986 969 Gene3D G3DSA:3.40.50.300 432 635 2.8E-46 T 14-10-2018 VAB027_1358 519683060f0d9882271e3d0999be5986 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 2.0E-15 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VAB027_1358 519683060f0d9882271e3d0999be5986 969 Gene3D G3DSA:3.40.50.10810 150 431 8.4E-103 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VAB027_1358 519683060f0d9882271e3d0999be5986 969 SUPERFAMILY SSF52540 118 378 4.72E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1358 519683060f0d9882271e3d0999be5986 969 SMART SM00487 150 342 7.6E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_1358 519683060f0d9882271e3d0999be5986 969 SUPERFAMILY SSF52540 273 647 7.15E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1358 519683060f0d9882271e3d0999be5986 969 Gene3D G3DSA:3.30.360.80 714 786 1.4E-30 T 14-10-2018 VAB027_1358 519683060f0d9882271e3d0999be5986 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.035 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VAB027_1358 519683060f0d9882271e3d0999be5986 969 Gene3D G3DSA:2.30.30.140 1 53 9.9E-24 T 14-10-2018 VAB027_1358 519683060f0d9882271e3d0999be5986 969 Gene3D G3DSA:2.30.30.930 55 114 9.8E-26 T 14-10-2018 VAB027_1358 519683060f0d9882271e3d0999be5986 969 Pfam PF00271 Helicase conserved C-terminal domain 495 603 1.3E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1358 519683060f0d9882271e3d0999be5986 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.5E-144 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SMART SM00956 414 517 1.4E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SUPERFAMILY SSF47819 534 608 1.02E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Gene3D G3DSA:1.10.10.10 344 526 6.0E-55 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SMART SM00490 253 334 2.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SMART SM00341 533 609 8.2E-23 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 18 606 2.4E-258 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Gene3D G3DSA:1.10.150.80 527 609 4.4E-28 T 14-10-2018 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SUPERFAMILY SSF52540 211 457 1.48E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SMART SM00487 25 221 1.4E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Pfam PF09382 RQC domain 409 517 5.0E-38 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 5.1E-20 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Gene3D G3DSA:3.40.50.300 6 211 2.0E-83 T 14-10-2018 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Pfam PF00270 DEAD/DEAH box helicase 33 188 2.8E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Pfam PF16124 RecQ zinc-binding 346 407 2.0E-17 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Gene3D G3DSA:3.40.50.300 212 343 1.0E-42 T 14-10-2018 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 Pfam PF00570 HRDC domain 537 603 8.5E-23 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 3.9E-191 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VAB027_3674 f1a2a1b86a8f370e7080046df6849e06 611 SUPERFAMILY SSF52540 18 202 7.28E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3620 d668f3ce1d456691f96d8901d62af941 247 PIRSF PIRSF028162 1 246 5.0E-103 T 14-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted VAB027_3620 d668f3ce1d456691f96d8901d62af941 247 Gene3D G3DSA:3.90.550.10 1 245 1.8E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3620 d668f3ce1d456691f96d8901d62af941 247 SUPERFAMILY SSF53448 2 239 4.9E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3527 0ec7e6a721e11516a11067b040212628 320 SUPERFAMILY SSF55681 68 268 2.84E-61 T 14-10-2018 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 SUPERFAMILY SSF46785 4 60 3.27E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Gene3D G3DSA:1.10.10.10 1 64 2.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3527 0ec7e6a721e11516a11067b040212628 320 SUPERFAMILY SSF50037 271 317 4.49E-10 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Gene3D G3DSA:3.30.930.10 65 270 1.2E-66 T 14-10-2018 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 8.2E-12 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.739 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Pfam PF08279 HTH domain 8 59 2.1E-10 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Gene3D G3DSA:2.30.30.100 271 313 4.9E-20 T 14-10-2018 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 9.8E-68 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3527 0ec7e6a721e11516a11067b040212628 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 1.4E-19 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 Gene3D G3DSA:1.20.81.30 55 173 1.3E-39 T 14-10-2018 VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.2E-38 T 14-10-2018 IPR003004 GspF/PilC family VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-38 T 14-10-2018 IPR003004 GspF/PilC family VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.2E-38 T 14-10-2018 IPR003004 GspF/PilC family VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-38 T 14-10-2018 IPR003004 GspF/PilC family VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 2.0E-34 T 14-10-2018 IPR018076 Type II secretion system F domain VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.6E-25 T 14-10-2018 IPR018076 Type II secretion system F domain VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 5.1E-160 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VAB027_162 fec3960aca089d94e3015780ee44d9b1 406 Gene3D G3DSA:1.20.81.30 257 369 1.1E-25 T 14-10-2018 VAB027_1961 728d9cd87743b688c5329e4d1a94c16d 252 SUPERFAMILY SSF88713 1 243 2.89E-70 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VAB027_1961 728d9cd87743b688c5329e4d1a94c16d 252 Pfam PF04794 YdjC-like protein 2 230 1.8E-53 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VAB027_1961 728d9cd87743b688c5329e4d1a94c16d 252 Gene3D G3DSA:3.20.20.370 1 244 6.7E-71 T 14-10-2018 VAB027_1961 728d9cd87743b688c5329e4d1a94c16d 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 40.085 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 SUPERFAMILY SSF158472 214 263 1.03E-9 T 14-10-2018 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 Gene3D G3DSA:1.20.1480.50 174 266 3.0E-11 T 14-10-2018 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 SUPERFAMILY SSF47384 284 364 1.39E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 SUPERFAMILY SSF55874 355 526 9.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_809 ffdc1d207791e924ff9e10b956745008 536 Pfam PF00672 HAMP domain 214 262 2.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 526 7.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_809 ffdc1d207791e924ff9e10b956745008 536 Gene3D G3DSA:1.10.287.130 267 364 7.0E-16 T 14-10-2018 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 4.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 Gene3D G3DSA:3.30.565.10 372 534 5.9E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_809 ffdc1d207791e924ff9e10b956745008 536 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 365 5.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 SMART SM00388 299 366 1.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_809 ffdc1d207791e924ff9e10b956745008 536 SMART SM00387 416 528 4.8E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_809 ffdc1d207791e924ff9e10b956745008 536 SMART SM00304 214 266 4.3E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 Pfam PF13481 AAA domain 81 222 2.8E-13 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 Gene3D G3DSA:3.40.50.300 66 278 3.3E-39 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 Gene3D G3DSA:3.30.230.10 316 456 3.7E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 SMART SM00382 91 244 1.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 Pfam PF13541 Subunit ChlI of Mg-chelatase 345 430 5.1E-9 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 SUPERFAMILY SSF52540 68 289 1.1E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 213 241 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 9 33 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 124 141 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 248 274 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 322 345 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 174 198 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 PRINTS PR01874 DNA repair protein radA signature 83 111 1.2E-93 T 14-10-2018 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 Hamap MF_01498 DNA repair protein RadA [radA]. 20 455 42.718 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 SUPERFAMILY SSF54211 255 453 3.15E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_2974 34df9732619631182d8ab7d3ed6fa65e 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 451 1.6E-222 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 SUPERFAMILY SSF55073 134 284 1.26E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 SMART SM00052 297 544 3.2E-75 T 14-10-2018 IPR001633 EAL domain VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 128 281 9.9E-27 T 14-10-2018 IPR000160 GGDEF domain VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 Gene3D G3DSA:3.30.70.270 123 298 4.0E-40 T 14-10-2018 VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 Gene3D G3DSA:3.20.20.450 299 554 2.4E-76 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 277 2.0E-30 T 14-10-2018 IPR000160 GGDEF domain VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 Pfam PF00563 EAL domain 303 539 1.9E-59 T 14-10-2018 IPR001633 EAL domain VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 SUPERFAMILY SSF55781 15 114 3.4E-5 T 14-10-2018 VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 SMART SM00267 118 283 3.8E-30 T 14-10-2018 IPR000160 GGDEF domain VAB027_946 6fddf312aeeea6debe28fe062db9b25f 556 SUPERFAMILY SSF141868 303 548 1.44E-72 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_633 55111af13e1911f168828bdf93fc1ff3 329 SMART SM00833 241 324 0.0058 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VAB027_633 55111af13e1911f168828bdf93fc1ff3 329 Gene3D G3DSA:3.40.50.300 2 196 1.5E-45 T 14-10-2018 VAB027_633 55111af13e1911f168828bdf93fc1ff3 329 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 180 7.0E-44 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VAB027_633 55111af13e1911f168828bdf93fc1ff3 329 SUPERFAMILY SSF52540 4 166 2.02E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3156 86bb75bb1349ba69adcf7f053cdf971b 330 SUPERFAMILY SSF51445 2 287 1.26E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_3156 86bb75bb1349ba69adcf7f053cdf971b 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 283 7.4E-82 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAB027_3156 86bb75bb1349ba69adcf7f053cdf971b 330 Gene3D G3DSA:3.20.20.300 1 330 5.2E-138 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VAB027_3156 86bb75bb1349ba69adcf7f053cdf971b 330 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 228 245 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VAB027_3156 86bb75bb1349ba69adcf7f053cdf971b 330 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 326 46.576 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAB027_3554 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3554 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.3E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAB027_3554 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_3554 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_3554 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 14-10-2018 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 Pfam PF01479 S4 domain 18 65 2.8E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 Gene3D G3DSA:3.30.2350.10 84 316 1.8E-73 T 14-10-2018 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 SMART SM00363 18 83 3.3E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 SUPERFAMILY SSF55120 77 309 7.81E-79 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.5E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 Gene3D G3DSA:3.10.290.10 2 76 6.7E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 SUPERFAMILY SSF55174 17 69 2.19E-10 T 14-10-2018 VAB027_3126 21f16f18d4325c80b3f12be2f5ab860a 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 5.6E-106 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 Pfam PF04002 RadC-like JAB domain 104 222 3.3E-45 T 14-10-2018 IPR025657 RadC-like JAB domain VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 Gene3D G3DSA:3.40.140.10 101 224 1.2E-43 T 14-10-2018 VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 Gene3D G3DSA:1.10.150.20 45 87 3.0E-5 T 14-10-2018 VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.4E-77 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 SUPERFAMILY SSF102712 133 190 4.05E-5 T 14-10-2018 VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VAB027_3633 4830c6270538cec1a64898cc8c0a045c 224 SUPERFAMILY SSF47781 17 91 3.16E-11 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_1170 4b416ce400b829406bed4505061ece5a 291 Gene3D G3DSA:3.40.50.2300 149 288 1.8E-24 T 14-10-2018 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 Pfam PF01584 CheW-like domain 2 135 6.5E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 SMART SM00260 1 133 3.2E-14 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 Gene3D G3DSA:2.30.30.40 5 127 3.4E-24 T 14-10-2018 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 Pfam PF00072 Response regulator receiver domain 161 275 1.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 PIRSF PIRSF002867 1 284 4.9E-87 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VAB027_1170 4b416ce400b829406bed4505061ece5a 291 SUPERFAMILY SSF52172 156 281 4.27E-23 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1170 4b416ce400b829406bed4505061ece5a 291 SUPERFAMILY SSF50341 4 138 3.92E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 SMART SM00448 159 276 2.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1170 4b416ce400b829406bed4505061ece5a 291 Gene3D G3DSA:2.40.50.180 17 132 3.4E-24 T 14-10-2018 VAB027_2614 592ba4b898646463f0635ef529ab983b 194 Pfam PF13023 HD domain 11 165 1.1E-15 T 14-10-2018 IPR006674 HD domain VAB027_2614 592ba4b898646463f0635ef529ab983b 194 SMART SM00471 26 151 1.8E-8 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_2614 592ba4b898646463f0635ef529ab983b 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 6.0E-36 T 14-10-2018 VAB027_2614 592ba4b898646463f0635ef529ab983b 194 SUPERFAMILY SSF109604 4 184 4.0E-43 T 14-10-2018 VAB027_2614 592ba4b898646463f0635ef529ab983b 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.614 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VAB027_2614 592ba4b898646463f0635ef529ab983b 194 Gene3D G3DSA:1.10.3210.10 1 194 1.0E-82 T 14-10-2018 VAB027_1116 1721983d9c46321c95c56e03e74c96a7 243 Pfam PF07670 Nucleoside recognition 85 179 2.8E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.3E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 PIRSF PIRSF006488 1 78 1.1E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-14 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.747 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 8.1E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 Gene3D G3DSA:1.10.287.1040 4 77 2.1E-23 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VAB027_1528 8a9d4eb753e1d3e75d84227bff9c365d 80 SUPERFAMILY SSF116842 2 73 6.41E-21 T 14-10-2018 VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 Gene3D G3DSA:3.40.1190.20 1 306 7.9E-101 T 14-10-2018 IPR029056 Ribokinase-like VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 PRINTS PR00990 Ribokinase signature 22 41 6.8E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 PRINTS PR00990 Ribokinase signature 175 190 6.8E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 PRINTS PR00990 Ribokinase signature 214 225 6.8E-8 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 Pfam PF00294 pfkB family carbohydrate kinase 1 297 8.2E-72 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAB027_510 1867aa6f7e33f1e65c5df915681119d5 306 SUPERFAMILY SSF53613 1 305 9.2E-83 T 14-10-2018 IPR029056 Ribokinase-like VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 5.5E-172 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 Pfam PF00472 RF-1 domain 218 323 6.0E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 Gene3D G3DSA:3.30.160.20 212 293 1.0E-96 T 14-10-2018 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 Gene3D G3DSA:1.20.58.410 3 104 6.7E-9 T 14-10-2018 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 Pfam PF03462 PCRF domain 13 205 5.0E-77 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 SUPERFAMILY SSF75620 12 355 1.02E-137 T 14-10-2018 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 Gene3D G3DSA:3.30.70.1660 115 343 1.0E-96 T 14-10-2018 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 SMART SM00937 67 180 6.5E-69 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAB027_2805 febc3d0ed809fe34700718f9bf3ddc3d 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.191 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VAB027_3026 59dec04a10edbecf6d2bcc9491deef57 260 Gene3D G3DSA:3.10.20.310 54 122 1.1E-25 T 14-10-2018 VAB027_3026 59dec04a10edbecf6d2bcc9491deef57 260 Pfam PF03799 Cell division protein FtsQ 126 238 3.4E-25 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB VAB027_3026 59dec04a10edbecf6d2bcc9491deef57 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 1.1E-16 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type VAB027_3026 59dec04a10edbecf6d2bcc9491deef57 260 Gene3D G3DSA:3.40.50.11690 125 251 5.2E-37 T 14-10-2018 VAB027_3026 59dec04a10edbecf6d2bcc9491deef57 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 23.447 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 6.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 Pfam PF12019 Type II transport protein GspH 41 142 1.2E-7 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 SUPERFAMILY SSF54523 5 94 9.42E-14 T 14-10-2018 VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 Gene3D G3DSA:3.30.700.10 5 166 3.2E-9 T 14-10-2018 VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1500 8e5e45459abae2bde755f61164dc3cb1 166 PIRSF PIRSF024622 1 166 1.1E-61 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT VAB027_3511 c46ba3340e09acf866b69c64a0dc1740 162 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 152 3.2E-56 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VAB027_3511 c46ba3340e09acf866b69c64a0dc1740 162 PIRSF PIRSF016548 1 162 1.1E-73 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VAB027_3511 c46ba3340e09acf866b69c64a0dc1740 162 Gene3D G3DSA:1.20.120.1370 1 155 2.9E-52 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily VAB027_373 cb712fcceb9b7c990871bb61779fd01c 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 46 199 4.4E-32 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VAB027_373 cb712fcceb9b7c990871bb61779fd01c 485 Gene3D G3DSA:2.70.50.50 24 202 1.0E-81 T 14-10-2018 VAB027_373 cb712fcceb9b7c990871bb61779fd01c 485 SUPERFAMILY SSF81296 34 203 1.08E-54 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_373 cb712fcceb9b7c990871bb61779fd01c 485 Gene3D G3DSA:2.60.40.2550 317 414 3.3E-47 T 14-10-2018 VAB027_373 cb712fcceb9b7c990871bb61779fd01c 485 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 56.389 T 14-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 VAB027_373 cb712fcceb9b7c990871bb61779fd01c 485 Gene3D G3DSA:3.30.70.2150 209 316 7.0E-43 T 14-10-2018 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SUPERFAMILY SSF52172 711 831 1.99E-30 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SUPERFAMILY SSF55874 523 696 4.45E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SUPERFAMILY SSF47226 876 978 3.66E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:3.30.565.10 535 695 1.9E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:1.20.120.160 869 983 3.0E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:1.10.287.130 456 534 5.5E-25 T 14-10-2018 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SUPERFAMILY SSF47384 457 535 1.96E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SMART SM00387 581 693 2.8E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SMART SM00304 360 412 1.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:1.20.58.920 47 179 1.5E-47 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:1.20.58.920 180 319 2.3E-52 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.3E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:3.40.50.2300 706 834 7.2E-31 T 14-10-2018 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 5.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 5.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 5.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 5.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 692 7.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SMART SM00388 469 534 6.3E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Pfam PF01627 Hpt domain 901 979 7.1E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Pfam PF00672 HAMP domain 360 408 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 PIRSF PIRSF036437 1 984 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 SMART SM00448 710 826 2.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 980 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Gene3D G3DSA:1.20.1480.50 320 417 3.9E-6 T 14-10-2018 VAB027_468 1556793fff71a25684f4be9bed48cac2 984 Pfam PF00072 Response regulator receiver domain 712 826 3.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_220 31f52d91bf4c461df6667c0f5371b045 185 Pfam PF00227 Proteasome subunit 2 169 5.0E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VAB027_220 31f52d91bf4c461df6667c0f5371b045 185 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.795 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VAB027_220 31f52d91bf4c461df6667c0f5371b045 185 SUPERFAMILY SSF56235 2 172 3.26E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_220 31f52d91bf4c461df6667c0f5371b045 185 PIRSF PIRSF039093 1 175 1.4E-86 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VAB027_220 31f52d91bf4c461df6667c0f5371b045 185 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.7E-86 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VAB027_220 31f52d91bf4c461df6667c0f5371b045 185 Gene3D G3DSA:3.60.20.10 1 173 2.7E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 5.9E-62 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 SUPERFAMILY SSF57825 101 152 1.7E-15 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.1E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 5.8E-19 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 SUPERFAMILY SSF54893 2 100 2.22E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.438 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 Gene3D G3DSA:3.30.70.140 1 100 1.6E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VAB027_1353 6add7ddd70cd4c112425db82f777c3c6 155 Gene3D G3DSA:2.30.30.20 101 153 3.3E-25 T 14-10-2018 VAB027_1390 2129b8e0af9cd5021e60b9593def2e01 254 Pfam PF03932 CutC family 4 205 8.4E-92 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAB027_1390 2129b8e0af9cd5021e60b9593def2e01 254 SUPERFAMILY SSF110395 4 247 1.44E-70 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAB027_1390 2129b8e0af9cd5021e60b9593def2e01 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.428 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAB027_1390 2129b8e0af9cd5021e60b9593def2e01 254 Gene3D G3DSA:3.20.20.380 3 250 1.3E-84 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAB027_2687 265e1f40e659d8f50ec741e97ac9d5e2 404 Gene3D G3DSA:1.25.40.10 153 294 6.2E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2687 265e1f40e659d8f50ec741e97ac9d5e2 404 SUPERFAMILY SSF48452 161 265 2.88E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2687 265e1f40e659d8f50ec741e97ac9d5e2 404 Pfam PF14559 Tetratricopeptide repeat 177 244 1.6E-7 T 14-10-2018 VAB027_2687 265e1f40e659d8f50ec741e97ac9d5e2 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 117 6.0E-31 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 Pfam PF00034 Cytochrome c 198 307 2.5E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 Pfam PF03150 Di-haem cytochrome c peroxidase 43 189 1.1E-48 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 SUPERFAMILY SSF46626 176 326 4.59E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 Gene3D G3DSA:1.10.760.10 42 189 2.7E-111 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 SUPERFAMILY SSF46626 21 177 1.3E-47 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 Gene3D G3DSA:1.10.760.10 190 313 2.7E-111 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_80 a980a85faa994ac41e61b8bc7e6d7228 333 PIRSF PIRSF000294 7 331 3.3E-128 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 SMART SM00020 32 263 5.8E-67 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 Gene3D G3DSA:2.40.10.10 45 141 8.2E-79 T 14-10-2018 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 Pfam PF00089 Trypsin 33 263 3.5E-51 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 1.3E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 64 79 1.3E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 1.3E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 Gene3D G3DSA:2.40.10.10 33 263 8.2E-79 T 14-10-2018 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 382 402 1.1E-5 T 14-10-2018 IPR020008 GlyGly-CTERM domain VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 SUPERFAMILY SSF50494 21 268 2.85E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 74 79 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VAB027_1879 6f8e390aacf6cb63c758ccc5f736737b 404 Gene3D G3DSA:2.60.40.10 268 376 7.2E-54 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2121 5784678f682857d8f281468930f52d95 561 SUPERFAMILY SSF52540 309 551 1.64E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2121 5784678f682857d8f281468930f52d95 561 Pfam PF00005 ABC transporter 333 481 5.3E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2121 5784678f682857d8f281468930f52d95 561 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2121 5784678f682857d8f281468930f52d95 561 Gene3D G3DSA:3.40.50.300 307 561 4.0E-91 T 14-10-2018 VAB027_2121 5784678f682857d8f281468930f52d95 561 Pfam PF00664 ABC transporter transmembrane region 5 271 6.5E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_2121 5784678f682857d8f281468930f52d95 561 SUPERFAMILY SSF90123 5 301 1.57E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2121 5784678f682857d8f281468930f52d95 561 Gene3D G3DSA:1.20.1560.10 1 303 4.7E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2121 5784678f682857d8f281468930f52d95 561 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 2 552 1.7E-220 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VAB027_2121 5784678f682857d8f281468930f52d95 561 SMART SM00382 341 527 1.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 Gene3D G3DSA:3.30.70.270 223 391 1.9E-20 T 14-10-2018 VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 SMART SM00267 226 393 7.0E-13 T 14-10-2018 IPR000160 GGDEF domain VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.1E-37 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 SMART SM00052 403 635 8.5E-11 T 14-10-2018 IPR001633 EAL domain VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 SUPERFAMILY SSF55073 244 387 1.88E-16 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 385 3.9E-13 T 14-10-2018 IPR000160 GGDEF domain VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 Pfam PF00563 EAL domain 411 634 1.3E-38 T 14-10-2018 IPR001633 EAL domain VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 SUPERFAMILY SSF141868 411 635 2.35E-41 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 Gene3D G3DSA:3.30.1040.50 102 151 6.0E-19 T 14-10-2018 VAB027_1050 76ae9e822cb7388ce2327840eb65cfb1 636 Gene3D G3DSA:3.20.20.450 401 636 2.3E-40 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Gene3D G3DSA:3.30.1490.20 1 192 4.8E-74 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 8.7E-6 T 14-10-2018 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 8.7E-6 T 14-10-2018 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 8.7E-6 T 14-10-2018 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 SUPERFAMILY SSF52009 348 466 4.06E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Gene3D G3DSA:3.20.20.60 477 786 4.4E-103 T 14-10-2018 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 PIRSF PIRSF000854 1 790 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 SUPERFAMILY SSF51621 461 786 1.8E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 SUPERFAMILY SSF56059 1 383 1.32E-109 T 14-10-2018 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 454 4.3E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Gene3D G3DSA:3.50.30.10 358 476 4.5E-41 T 14-10-2018 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 787 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 1.3E-60 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 1.9E-119 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VAB027_1141 1e27fb60e28f98cb05d11e7e722a1e23 790 Gene3D G3DSA:3.30.470.20 193 356 8.4E-58 T 14-10-2018 VAB027_2370 e2d0b6d1dac995365cf893349beee517 272 PRINTS PR00412 Epoxide hydrolase signature 244 266 4.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2370 e2d0b6d1dac995365cf893349beee517 272 PRINTS PR00412 Epoxide hydrolase signature 212 228 4.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2370 e2d0b6d1dac995365cf893349beee517 272 PRINTS PR00412 Epoxide hydrolase signature 31 49 4.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2370 e2d0b6d1dac995365cf893349beee517 272 SUPERFAMILY SSF53474 18 269 6.08E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2370 e2d0b6d1dac995365cf893349beee517 272 Pfam PF00561 alpha/beta hydrolase fold 26 128 7.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2370 e2d0b6d1dac995365cf893349beee517 272 Gene3D G3DSA:3.40.50.1820 12 269 2.1E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2762 e9467b2265680a643a40106267d128aa 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 5.2E-174 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2762 e9467b2265680a643a40106267d128aa 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 5.8E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2762 e9467b2265680a643a40106267d128aa 439 SMART SM00382 158 342 6.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2762 e9467b2265680a643a40106267d128aa 439 SUPERFAMILY SSF52540 94 362 1.04E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2762 e9467b2265680a643a40106267d128aa 439 Gene3D G3DSA:3.40.50.12240 17 439 3.3E-156 T 14-10-2018 VAB027_2762 e9467b2265680a643a40106267d128aa 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 4.4E-194 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2762 e9467b2265680a643a40106267d128aa 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2760 e71830505aa37fffcd669a061cbc39ac 669 Gene3D G3DSA:3.30.750.140 519 632 2.3E-35 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VAB027_2760 e71830505aa37fffcd669a061cbc39ac 669 PRINTS PR01007 Flagellar hook-length control protein signature 555 573 2.2E-9 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 VAB027_2760 e71830505aa37fffcd669a061cbc39ac 669 PRINTS PR01007 Flagellar hook-length control protein signature 588 611 2.2E-9 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 VAB027_2760 e71830505aa37fffcd669a061cbc39ac 669 PRINTS PR01007 Flagellar hook-length control protein signature 314 331 2.2E-9 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 VAB027_2760 e71830505aa37fffcd669a061cbc39ac 669 Pfam PF02120 Flagellar hook-length control protein FliK 540 623 5.0E-27 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 3.9E-129 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 Gene3D G3DSA:1.10.240.10 218 326 3.0E-33 T 14-10-2018 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.394 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 SUPERFAMILY SSF55174 320 394 1.57E-15 T 14-10-2018 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 Gene3D G3DSA:3.10.290.10 327 394 1.7E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 SUPERFAMILY SSF52374 6 315 9.21E-98 T 14-10-2018 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 4.4E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 Pfam PF01479 S4 domain 337 372 1.9E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 SMART SM00363 334 395 8.7E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3218 077c8b74cc01132ffbcbb5497c6924a6 395 Gene3D G3DSA:3.40.50.620 5 217 6.9E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 SUPERFAMILY SSF46955 2 121 5.49E-35 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 Gene3D G3DSA:1.10.1660.10 1 130 4.1E-37 T 14-10-2018 VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 4.9E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.2E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.2E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.2E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 SMART SM00422 2 71 4.7E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_3568 91678917580df5b7e2c78cdb8af87483 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.0E-63 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.1E-191 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 Gene3D G3DSA:3.40.50.300 187 380 1.1E-76 T 14-10-2018 VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 Gene3D G3DSA:1.10.8.630 4 114 6.3E-35 T 14-10-2018 VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 SMART SM00487 195 396 3.9E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 24.863 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 SUPERFAMILY SSF52540 461 634 6.18E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 SUPERFAMILY SSF52540 187 380 1.88E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 Pfam PF00271 Helicase conserved C-terminal domain 516 589 1.8E-7 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 SMART SM00490 493 590 5.2E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_217 c20bbbeec2c1de37269684e2da01244a 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 1.1E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_2635 f2e3de8b9b046a8ad5b44cb9cb29d32e 296 PIRSF PIRSF016020 3 296 5.5E-65 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VAB027_2635 f2e3de8b9b046a8ad5b44cb9cb29d32e 296 SUPERFAMILY SSF74650 6 288 1.0E-76 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAB027_2635 f2e3de8b9b046a8ad5b44cb9cb29d32e 296 Pfam PF01263 Aldose 1-epimerase 27 292 5.1E-55 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VAB027_2635 f2e3de8b9b046a8ad5b44cb9cb29d32e 296 Gene3D G3DSA:2.70.98.10 1 295 2.3E-90 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 SMART SM00387 353 463 7.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Gene3D G3DSA:3.30.450.210 33 160 2.9E-54 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 SMART SM00304 193 246 2.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Gene3D G3DSA:1.10.287.130 197 311 6.7E-33 T 14-10-2018 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Pfam PF00672 HAMP domain 194 241 3.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Gene3D G3DSA:3.30.565.10 314 462 3.9E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 307 5.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 SUPERFAMILY SSF55874 299 461 2.23E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 462 1.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 SUPERFAMILY SSF47384 232 308 5.89E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 SMART SM00388 247 309 1.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_203 77a1ad63b680f9e58fda34ad1d7650a6 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 38 171 5.7E-60 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VAB027_2570 9f9402f0bc85c4d8778c2d659d6cb4a5 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.1E-85 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAB027_2570 9f9402f0bc85c4d8778c2d659d6cb4a5 453 PIRSF PIRSF006066 1 447 1.4E-135 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAB027_2570 9f9402f0bc85c4d8778c2d659d6cb4a5 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 436 4.1E-115 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAB027_2715 29829a9963970e39e00b53a9e07c3d9f 76 SMART SM00899 1 74 1.7E-21 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VAB027_2715 29829a9963970e39e00b53a9e07c3d9f 76 SUPERFAMILY SSF50037 4 74 7.55E-19 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VAB027_2715 29829a9963970e39e00b53a9e07c3d9f 76 Pfam PF04023 FeoA domain 1 74 4.0E-17 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VAB027_2715 29829a9963970e39e00b53a9e07c3d9f 76 Gene3D G3DSA:2.30.30.90 1 76 1.4E-22 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain VAB027_1021 975d5a0860def153c8027e9da71fc207 343 Gene3D G3DSA:3.40.190.10 129 337 1.9E-107 T 14-10-2018 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 SUPERFAMILY SSF53850 22 340 8.26E-89 T 14-10-2018 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 199 218 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 162 181 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 144 158 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 1.1E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 Pfam PF13416 Bacterial extracellular solute-binding protein 39 308 2.9E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_1021 975d5a0860def153c8027e9da71fc207 343 PIRSF PIRSF019574 1 343 2.6E-106 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_1021 975d5a0860def153c8027e9da71fc207 343 Gene3D G3DSA:3.40.190.10 26 307 1.9E-107 T 14-10-2018 VAB027_1324 933c860632897cd358d28701a1222441 336 Gene3D G3DSA:3.40.190.80 200 336 2.3E-61 T 14-10-2018 VAB027_1324 933c860632897cd358d28701a1222441 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.47 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.2E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.2E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.2E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.2E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.2E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.2E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 Gene3D G3DSA:3.30.540.10 4 198 7.8E-77 T 14-10-2018 VAB027_1324 933c860632897cd358d28701a1222441 336 PIRSF PIRSF500210 1 335 1.4E-128 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.2E-77 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1324 933c860632897cd358d28701a1222441 336 SUPERFAMILY SSF56655 2 331 4.51E-114 T 14-10-2018 VAB027_1324 933c860632897cd358d28701a1222441 336 PIRSF PIRSF000904 1 335 3.2E-125 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAB027_1465 ac31934b58978876e4179cfff98c37a6 99 Gene3D G3DSA:1.10.260.40 2 73 6.3E-14 T 14-10-2018 VAB027_1465 ac31934b58978876e4179cfff98c37a6 99 SMART SM00530 10 64 2.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1465 ac31934b58978876e4179cfff98c37a6 99 Pfam PF13560 Helix-turn-helix domain 7 60 2.8E-7 T 14-10-2018 VAB027_1465 ac31934b58978876e4179cfff98c37a6 99 SUPERFAMILY SSF47413 6 70 3.1E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_393 047060a08f644395886929fffab1c574 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 323 1.2E-94 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_393 047060a08f644395886929fffab1c574 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 399 50.711 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_393 047060a08f644395886929fffab1c574 402 Gene3D G3DSA:3.40.50.720 1 401 5.1E-166 T 14-10-2018 VAB027_393 047060a08f644395886929fffab1c574 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 5.9E-34 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_393 047060a08f644395886929fffab1c574 402 Pfam PF07055 Enoyl reductase FAD binding domain 330 393 3.0E-25 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_393 047060a08f644395886929fffab1c574 402 SUPERFAMILY SSF51735 41 163 1.94E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 Gene3D G3DSA:2.130.10.10 22 246 1.4E-28 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 192 230 0.25 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 65 106 160.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 150 189 4.5E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 277 323 170.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 SMART SM00320 236 274 1.4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 14-10-2018 IPR019775 WD40 repeat, conserved site VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 Gene3D G3DSA:2.130.10.10 247 326 2.1E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 Pfam PF00400 WD domain, G-beta repeat 157 189 0.0025 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VAB027_3479 c443a02c07d5a191eb5161d46d94c685 326 SUPERFAMILY SSF50998 34 317 1.1E-40 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 46.308 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 SUPERFAMILY SSF52283 3 132 1.59E-22 T 14-10-2018 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Gene3D G3DSA:3.40.50.720 93 258 2.0E-117 T 14-10-2018 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Gene3D G3DSA:3.30.1370.170 294 381 3.6E-39 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Gene3D G3DSA:3.40.50.720 1 279 2.0E-117 T 14-10-2018 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 SUPERFAMILY SSF51735 93 258 1.71E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 287 5.9E-23 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 1.5E-35 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 9.6E-28 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VAB027_2742 39097f2c60b80b7c74a3b199324543e0 381 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 483 40.066 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 SMART SM00028 426 459 71.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 SMART SM00028 341 374 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 SMART SM00028 307 340 0.17 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Pfam PF14559 Tetratricopeptide repeat 352 415 7.0E-11 T 14-10-2018 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Pfam PF01435 Peptidase family M48 70 255 2.9E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Gene3D G3DSA:1.25.40.10 374 470 4.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 SUPERFAMILY SSF48452 310 455 2.37E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Pfam PF13181 Tetratricopeptide repeat 309 340 0.11 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Gene3D G3DSA:1.25.40.10 271 373 2.1E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2792 f0436f3189d46d348c41d0424644fa8c 484 Gene3D G3DSA:3.30.2010.10 71 148 9.0E-7 T 14-10-2018 VAB027_2619 2317d35e449addab04efff6a088f5494 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.523 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VAB027_2619 2317d35e449addab04efff6a088f5494 373 Gene3D G3DSA:1.10.150.80 294 373 4.6E-26 T 14-10-2018 VAB027_2619 2317d35e449addab04efff6a088f5494 373 SMART SM00474 3 171 4.8E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAB027_2619 2317d35e449addab04efff6a088f5494 373 Pfam PF00570 HRDC domain 213 279 1.5E-7 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VAB027_2619 2317d35e449addab04efff6a088f5494 373 SUPERFAMILY SSF53098 2 209 2.36E-64 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2619 2317d35e449addab04efff6a088f5494 373 Gene3D G3DSA:1.10.150.80 195 292 1.9E-16 T 14-10-2018 VAB027_2619 2317d35e449addab04efff6a088f5494 373 SUPERFAMILY SSF47819 193 300 4.19E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VAB027_2619 2317d35e449addab04efff6a088f5494 373 SUPERFAMILY SSF47819 296 371 7.85E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VAB027_2619 2317d35e449addab04efff6a088f5494 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 372 7.1E-162 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VAB027_2619 2317d35e449addab04efff6a088f5494 373 Pfam PF01612 3'-5' exonuclease 3 170 4.9E-35 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAB027_2619 2317d35e449addab04efff6a088f5494 373 Gene3D G3DSA:3.30.420.10 1 194 2.5E-63 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1414 be2f9467d6acfda1e0eff8b6f2e5476c 360 SMART SM00530 30 91 0.0031 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1414 be2f9467d6acfda1e0eff8b6f2e5476c 360 Pfam PF13464 Domain of unknown function (DUF4115) 286 359 8.9E-25 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 VAB027_1414 be2f9467d6acfda1e0eff8b6f2e5476c 360 SUPERFAMILY SSF47413 26 96 1.13E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1414 be2f9467d6acfda1e0eff8b6f2e5476c 360 Pfam PF13413 Helix-turn-helix domain 31 90 1.0E-17 T 14-10-2018 VAB027_1414 be2f9467d6acfda1e0eff8b6f2e5476c 360 Gene3D G3DSA:1.10.260.40 17 126 8.8E-23 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Gene3D G3DSA:3.40.50.300 272 462 1.4E-74 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Gene3D G3DSA:3.90.640.50 57 129 1.4E-93 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Gene3D G3DSA:3.90.1570.50 30 265 1.4E-93 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 SUPERFAMILY SSF52540 230 443 4.99E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Gene3D G3DSA:3.40.50.300 463 726 4.5E-105 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Gene3D G3DSA:1.20.58.2040 727 880 2.1E-81 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 SMART SM00487 269 479 1.4E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 30 221 2.4E-54 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 35 720 3.8E-209 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Pfam PF04851 Type III restriction enzyme, res subunit 272 440 5.9E-37 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Gene3D G3DSA:1.10.10.2110 790 831 2.1E-81 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 832 867 7.0E-9 T 14-10-2018 VAB027_3655 785df4097d5e9e335b352012fcbd01ca 1033 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 723 1026 3.1E-68 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal VAB027_3004 5697b035191e95de49d600ed94d13936 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.9E-23 T 14-10-2018 VAB027_3004 5697b035191e95de49d600ed94d13936 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.9E-23 T 14-10-2018 VAB027_3004 5697b035191e95de49d600ed94d13936 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.9E-23 T 14-10-2018 VAB027_3004 5697b035191e95de49d600ed94d13936 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.9E-23 T 14-10-2018 VAB027_3004 5697b035191e95de49d600ed94d13936 489 SUPERFAMILY SSF51971 389 479 2.35E-8 T 14-10-2018 VAB027_3004 5697b035191e95de49d600ed94d13936 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 37 131 2.9E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VAB027_3004 5697b035191e95de49d600ed94d13936 489 Gene3D G3DSA:1.10.1060.10 8 144 2.1E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_3004 5697b035191e95de49d600ed94d13936 489 Gene3D G3DSA:3.50.50.60 145 243 2.2E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3004 5697b035191e95de49d600ed94d13936 489 Gene3D G3DSA:3.50.50.60 245 406 6.6E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3004 5697b035191e95de49d600ed94d13936 489 SUPERFAMILY SSF51971 143 407 7.65E-66 T 14-10-2018 VAB027_3004 5697b035191e95de49d600ed94d13936 489 SUPERFAMILY SSF46548 2 155 1.39E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_3004 5697b035191e95de49d600ed94d13936 489 Gene3D G3DSA:3.50.50.60 412 474 1.0E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3004 5697b035191e95de49d600ed94d13936 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.7E-200 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VAB027_3004 5697b035191e95de49d600ed94d13936 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 6.3E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_1824 fa8a9484cb4fb767db6e4013fc055489 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 101 27.773 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VAB027_1824 fa8a9484cb4fb767db6e4013fc055489 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 3.4E-33 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VAB027_1824 fa8a9484cb4fb767db6e4013fc055489 106 Gene3D G3DSA:3.30.1390.10 1 106 4.3E-45 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAB027_1824 fa8a9484cb4fb767db6e4013fc055489 106 SUPERFAMILY SSF54736 22 105 4.29E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAB027_2329 be2cd5ee62f5562c04b87264870f9302 320 Gene3D G3DSA:1.10.3720.10 64 306 9.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2329 be2cd5ee62f5562c04b87264870f9302 320 SUPERFAMILY SSF161098 69 298 1.11E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2329 be2cd5ee62f5562c04b87264870f9302 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.0E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 Pfam PF00106 short chain dehydrogenase 13 208 3.5E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 Gene3D G3DSA:3.40.50.720 1 246 2.1E-69 T 14-10-2018 VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1743 d1b9871488ef9eeb8fefb741525d1f22 247 SUPERFAMILY SSF51735 9 242 9.0E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 SUPERFAMILY SSF53474 12 282 9.41E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 PRINTS PR00412 Epoxide hydrolase signature 100 113 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 PRINTS PR00412 Epoxide hydrolase signature 34 52 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 PRINTS PR00412 Epoxide hydrolase signature 114 127 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 PRINTS PR00412 Epoxide hydrolase signature 56 71 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 PRINTS PR00412 Epoxide hydrolase signature 258 280 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 Pfam PF12697 Alpha/beta hydrolase family 30 275 5.9E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2621 5da5296f2e1b1837e8824fad28775da3 284 Gene3D G3DSA:3.40.50.1820 9 277 4.0E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_799 f41ef28a3fc273349b54ddec750bf9d3 355 SUPERFAMILY SSF56281 35 291 1.45E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_799 f41ef28a3fc273349b54ddec750bf9d3 355 Gene3D G3DSA:3.60.15.10 3 355 5.4E-111 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_799 f41ef28a3fc273349b54ddec750bf9d3 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 2.0E-12 T 14-10-2018 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Gene3D G3DSA:1.20.120.160 2 145 1.2E-36 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SUPERFAMILY SSF47384 404 464 4.71E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Pfam PF01584 CheW-like domain 657 786 3.0E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SUPERFAMILY SSF50341 650 784 1.57E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Gene3D G3DSA:3.30.565.10 464 650 9.2E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Gene3D G3DSA:2.30.30.40 651 780 9.2E-35 T 14-10-2018 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SUPERFAMILY SSF47226 6 128 3.27E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Gene3D G3DSA:2.40.50.180 674 739 9.2E-35 T 14-10-2018 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Gene3D G3DSA:1.10.287.560 403 463 2.1E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 650 2.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SMART SM00387 508 651 3.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 5.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 5.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 605 5.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 5.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SMART SM00260 643 784 1.1E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 403 463 1.1E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SMART SM01231 403 463 7.6E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SMART SM00073 6 103 1.1E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 SUPERFAMILY SSF55874 466 649 1.7E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2701 c9143c1607dd2a26963b7bca1a0e70d3 793 Pfam PF01627 Hpt domain 8 100 1.8E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_244 d226a4b21d610548744e57a463452220 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 6.7E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal VAB027_244 d226a4b21d610548744e57a463452220 179 Pfam PF10400 Virulence activator alpha C-term 92 175 6.9E-15 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal VAB027_244 d226a4b21d610548744e57a463452220 179 Gene3D G3DSA:1.10.10.10 1 89 7.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_244 d226a4b21d610548744e57a463452220 179 SUPERFAMILY SSF46785 3 178 1.65E-45 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2875 50928c322e2d6b954ffefae3857533d2 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 6.0E-107 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2875 50928c322e2d6b954ffefae3857533d2 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 230 1.5E-82 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2875 50928c322e2d6b954ffefae3857533d2 247 Gene3D G3DSA:3.30.420.10 4 196 7.5E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_2875 50928c322e2d6b954ffefae3857533d2 247 Pfam PF00929 Exonuclease 13 180 4.7E-40 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_2875 50928c322e2d6b954ffefae3857533d2 247 SUPERFAMILY SSF53098 10 190 1.8E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2875 50928c322e2d6b954ffefae3857533d2 247 SMART SM00479 11 189 4.3E-52 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 1.0E-47 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 6.6E-21 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 SUPERFAMILY SSF52172 1 108 7.45E-33 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 14-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Gene3D G3DSA:3.40.640.10 109 419 3.0E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 SUPERFAMILY SSF53383 109 566 8.11E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Gene3D G3DSA:3.90.1150.10 421 600 9.9E-73 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 PIRSF PIRSF009393 1 720 1.5E-295 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Gene3D G3DSA:3.40.50.220 1 108 3.5E-21 T 14-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 2.2E-192 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 SUPERFAMILY SSF55904 571 719 8.76E-47 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VAB027_1068 997f29b1f45d88900a353ad15d8dad59 720 Gene3D G3DSA:3.90.100.10 601 720 5.4E-43 T 14-10-2018 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 PIRSF PIRSF036979 26 334 1.4E-26 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 Hamap MF_00737 Formimidoylglutamase [hutG]. 6 328 44.25 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 ProSitePatterns PS01053 Arginase family signature. 256 277 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 Gene3D G3DSA:3.40.800.10 1 340 2.1E-145 T 14-10-2018 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 TIGRFAM TIGR01227 hutG: formimidoylglutamase 11 328 1.7E-132 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 PRINTS PR00116 Arginase signature 253 282 9.4E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 PRINTS PR00116 Arginase signature 123 138 9.4E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 SUPERFAMILY SSF52768 10 334 6.12E-85 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VAB027_1883 c0c2491ffb25b45203f5341a0f5517b3 340 Pfam PF00491 Arginase family 45 326 1.4E-61 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 Gene3D G3DSA:3.30.450.20 49 267 2.4E-89 T 14-10-2018 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 SMART SM00304 375 442 31.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 SMART SM00304 293 347 1.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 Gene3D G3DSA:1.10.287.950 293 624 8.8E-67 T 14-10-2018 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 SUPERFAMILY SSF103190 58 185 1.24E-20 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 590 4.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 SUPERFAMILY SSF58104 315 624 3.92E-72 T 14-10-2018 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 Pfam PF02743 Cache domain 52 256 2.6E-31 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 SMART SM00283 362 623 6.5E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 Gene3D G3DSA:3.30.450.20 62 174 2.4E-89 T 14-10-2018 VAB027_1196 2ca13d83aa4123e2ee9028c95afcfc30 624 Pfam PF00672 HAMP domain 293 343 7.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 SMART SM00357 23 79 3.5E-10 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Gene3D G3DSA:2.40.50.140 565 651 1.1E-34 T 14-10-2018 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 SUPERFAMILY SSF50249 568 649 4.07E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Gene3D G3DSA:2.40.50.140 1 82 8.3E-27 T 14-10-2018 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 SUPERFAMILY SSF50249 9 80 4.37E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 SMART SM00955 193 523 3.4E-113 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 1.4E-185 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 SUPERFAMILY SSF50249 186 563 1.71E-105 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.141 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 SUPERFAMILY SSF50249 83 173 9.64E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Gene3D G3DSA:2.40.50.640 83 157 7.9E-30 T 14-10-2018 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Pfam PF00575 S1 RNA binding domain 564 646 6.4E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Pfam PF08206 Ribonuclease B OB domain 24 80 9.8E-17 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VAB027_378 4dde6fd82a0a8e66e7889417b553f21e 678 Pfam PF00773 RNB domain 193 521 2.7E-82 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 492 546 2.0E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 SUPERFAMILY SSF55957 463 544 1.96E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Gene3D G3DSA:3.30.310.50 443 548 7.8E-7 T 14-10-2018 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 310 2.2E-25 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 441 4.4E-17 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 SUPERFAMILY SSF53738 302 445 2.83E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 181 2.3E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Gene3D G3DSA:3.40.120.10 204 322 9.8E-21 T 14-10-2018 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 SUPERFAMILY SSF53738 32 214 7.06E-43 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 3.2E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 3.2E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 3.2E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Gene3D G3DSA:3.40.120.10 323 442 1.0E-31 T 14-10-2018 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 Gene3D G3DSA:3.40.120.10 31 187 4.1E-47 T 14-10-2018 VAB027_1090 4eff7a065733b46d86987a9b0705a059 567 SUPERFAMILY SSF53738 204 312 7.85E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 Gene3D G3DSA:3.40.50.2300 3 131 7.2E-23 T 14-10-2018 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 SUPERFAMILY SSF52172 4 129 1.37E-22 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_192 608659701bc308c176016a9f5ae4ee04 208 Pfam PF00072 Response regulator receiver domain 7 119 1.8E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 SUPERFAMILY SSF46894 139 205 7.48E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 Gene3D G3DSA:1.10.10.10 146 208 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_192 608659701bc308c176016a9f5ae4ee04 208 SMART SM00421 146 203 6.2E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 SMART SM00448 5 118 5.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_192 608659701bc308c176016a9f5ae4ee04 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 6.8E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SUPERFAMILY SSF47384 468 545 4.32E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 360 0.0 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Gene3D G3DSA:3.30.450.20 344 465 2.3E-8 T 14-10-2018 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Gene3D G3DSA:3.30.450.220 52 207 1.7E-65 T 14-10-2018 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SUPERFAMILY SSF103190 52 269 3.4E-63 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 1.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 659 1.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 1.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 1.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Gene3D G3DSA:3.30.565.10 545 710 3.6E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SUPERFAMILY SSF55874 533 708 9.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SMART SM00448 730 842 8.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Pfam PF00072 Response regulator receiver domain 732 842 5.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Gene3D G3DSA:3.40.50.2300 722 853 1.8E-29 T 14-10-2018 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Pfam PF09308 LuxQ, periplasmic 41 277 2.6E-98 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SMART SM00387 591 706 4.1E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 544 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Gene3D G3DSA:1.10.287.130 466 544 3.1E-23 T 14-10-2018 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Gene3D G3DSA:2.20.20.100 208 271 4.9E-46 T 14-10-2018 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 704 7.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SMART SM00388 479 544 3.6E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_443 6bcddae4b9fed304401cecb29f1ac713 857 SUPERFAMILY SSF52172 729 849 3.56E-29 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 SUPERFAMILY SSF53067 135 304 3.33E-42 T 14-10-2018 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 SUPERFAMILY SSF109604 309 495 5.34E-40 T 14-10-2018 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.75 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 Gene3D G3DSA:1.10.3210.10 306 497 1.5E-45 T 14-10-2018 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 SUPERFAMILY SSF53067 9 129 3.56E-36 T 14-10-2018 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 Gene3D G3DSA:3.30.420.150 114 291 8.9E-83 T 14-10-2018 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 Gene3D G3DSA:3.30.420.40 11 299 8.9E-83 T 14-10-2018 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 2.5E-88 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VAB027_3543 5e53291f9077add3fe6d99a81592d1cc 497 PIRSF PIRSF001267 1 497 9.7E-179 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 1 569 5.7E-233 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 Pfam PF00890 FAD binding domain 1 386 1.6E-110 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 569 2.7E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 PIRSF PIRSF000171 2 561 5.8E-42 T 14-10-2018 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 SUPERFAMILY SSF51905 2 419 1.86E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 1 569 2.0E-265 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 Gene3D G3DSA:4.10.80.40 529 569 8.2E-22 T 14-10-2018 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 Gene3D G3DSA:3.90.700.10 227 331 1.2E-162 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 SUPERFAMILY SSF56425 217 337 2.84E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 SUPERFAMILY SSF46977 432 569 1.44E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 24 33 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 Gene3D G3DSA:1.20.58.100 413 528 3.3E-38 T 14-10-2018 VAB027_2725 7296bbe6d4bf369995b46f0e439e3808 569 Gene3D G3DSA:3.50.50.60 1 397 1.2E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2732 72977802afb491125ada3cac7fd47827 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 1.6E-45 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VAB027_2732 72977802afb491125ada3cac7fd47827 177 Gene3D G3DSA:1.20.1380.10 62 177 2.3E-48 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VAB027_2732 72977802afb491125ada3cac7fd47827 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-23 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VAB027_2732 72977802afb491125ada3cac7fd47827 177 Gene3D G3DSA:1.10.1220.10 1 39 1.7E-23 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAB027_2732 72977802afb491125ada3cac7fd47827 177 SUPERFAMILY SSF47598 1 34 4.0E-13 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAB027_2732 72977802afb491125ada3cac7fd47827 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 40.866 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VAB027_2732 72977802afb491125ada3cac7fd47827 177 PIRSF PIRSF019401 1 68 3.5E-17 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VAB027_2732 72977802afb491125ada3cac7fd47827 177 PIRSF PIRSF019401 45 177 3.4E-36 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VAB027_2732 72977802afb491125ada3cac7fd47827 177 SUPERFAMILY SSF82808 63 176 9.68E-49 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 SUPERFAMILY SSF52540 1 343 1.15E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 Gene3D G3DSA:3.40.50.300 6 336 6.7E-82 T 14-10-2018 VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 96.673 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 6.8E-117 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 359 4.1E-36 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 Gene3D G3DSA:1.20.1050.90 125 302 6.7E-82 T 14-10-2018 VAB027_3 3eecdeb3c54573bb97df65c8afdb9a54 363 ProSitePatterns PS00617 RecF protein signature 1. 122 142 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 PIRSF PIRSF006334 14 295 9.1E-108 T 14-10-2018 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.756 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 SUPERFAMILY SSF53927 153 283 1.36E-36 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 1.7E-113 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 SUPERFAMILY SSF53927 1 147 7.53E-42 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 5.6E-13 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 Gene3D G3DSA:3.40.140.10 180 295 3.3E-29 T 14-10-2018 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.9E-41 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VAB027_1910 af9e6aff0b5a2901b637bffc044e2b23 295 Gene3D G3DSA:3.40.140.10 29 179 6.8E-45 T 14-10-2018 VAB027_2689 6ae7953d81572845706e20fc5dc7e051 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 1.2E-72 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VAB027_2689 6ae7953d81572845706e20fc5dc7e051 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAB027_2689 6ae7953d81572845706e20fc5dc7e051 184 Gene3D G3DSA:3.40.30.10 20 184 1.9E-46 T 14-10-2018 VAB027_2689 6ae7953d81572845706e20fc5dc7e051 184 Pfam PF08534 Redoxin 41 163 1.1E-27 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VAB027_2689 6ae7953d81572845706e20fc5dc7e051 184 SUPERFAMILY SSF52833 46 177 4.33E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_2966 efe6adc3856630b80031b51b959a2aa4 114 Pfam PF01588 Putative tRNA binding domain 18 110 1.0E-20 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VAB027_2966 efe6adc3856630b80031b51b959a2aa4 114 SUPERFAMILY SSF50249 11 113 2.69E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2966 efe6adc3856630b80031b51b959a2aa4 114 Gene3D G3DSA:2.40.50.140 6 114 1.0E-30 T 14-10-2018 VAB027_489 4f3b29273c6967eeee8e5d6df18c2a5e 191 Gene3D G3DSA:1.10.3820.10 12 187 1.6E-33 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VAB027_489 4f3b29273c6967eeee8e5d6df18c2a5e 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 3.3E-94 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 VAB027_489 4f3b29273c6967eeee8e5d6df18c2a5e 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 1.5E-71 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VAB027_489 4f3b29273c6967eeee8e5d6df18c2a5e 191 SUPERFAMILY SSF48695 16 190 4.81E-57 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VAB027_489 4f3b29273c6967eeee8e5d6df18c2a5e 191 PIRSF PIRSF000013 1 191 1.8E-95 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 Pfam PF00271 Helicase conserved C-terminal domain 223 331 6.1E-26 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 Gene3D G3DSA:3.40.50.300 205 394 1.9E-44 T 14-10-2018 VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 Gene3D G3DSA:3.40.50.300 1 202 2.3E-64 T 14-10-2018 VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 SMART SM00490 250 331 2.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 SMART SM00487 19 210 1.4E-46 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 Pfam PF00270 DEAD/DEAH box helicase 24 185 2.6E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_1136 5b0bea3a685318b65ca78ba0e1f75dab 406 SUPERFAMILY SSF52540 30 343 1.68E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SUPERFAMILY SSF50249 68 148 3.06E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 736 1.5E-227 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 Pfam PF00575 S1 RNA binding domain 654 735 6.1E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SMART SM00357 87 146 0.001 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 Pfam PF08206 Ribonuclease B OB domain 88 145 6.4E-14 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 ProSitePatterns PS01175 Ribonuclease II family signature. 557 581 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 Gene3D G3DSA:2.40.50.140 72 148 4.0E-14 T 14-10-2018 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SUPERFAMILY SSF50249 658 734 1.94E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 Gene3D G3DSA:2.40.50.140 659 738 4.9E-13 T 14-10-2018 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SMART SM00316 656 737 3.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SUPERFAMILY SSF50249 142 237 4.45E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SMART SM00955 261 590 6.9E-169 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 Hamap MF_01895 Ribonuclease R [rnr]. 39 737 50.105 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 75 735 1.4E-197 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 SUPERFAMILY SSF50249 222 654 7.54E-134 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_301 6284400dcdebefd27a0fa1e1dac39159 738 Pfam PF00773 RNB domain 261 589 4.8E-105 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 3.9E-85 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 SUPERFAMILY SSF53218 7 168 3.66E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 SMART SM00852 14 158 9.1E-30 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.5E-37 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 PIRSF PIRSF006443 1 166 1.8E-66 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 1.3E-35 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_1708 91f75bc405ff0a1b55531e681308b90c 170 Gene3D G3DSA:3.40.980.10 2 170 2.9E-53 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_3013 ec21a2b98f0a0e56c5ccfa9f7b28e8de 286 SUPERFAMILY SSF53850 90 280 3.98E-20 T 14-10-2018 VAB027_3013 ec21a2b98f0a0e56c5ccfa9f7b28e8de 286 Gene3D G3DSA:1.10.10.10 4 68 2.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3013 ec21a2b98f0a0e56c5ccfa9f7b28e8de 286 Gene3D G3DSA:3.40.190.290 90 280 1.4E-9 T 14-10-2018 VAB027_3013 ec21a2b98f0a0e56c5ccfa9f7b28e8de 286 SUPERFAMILY SSF46785 4 85 7.56E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3013 ec21a2b98f0a0e56c5ccfa9f7b28e8de 286 Pfam PF03466 LysR substrate binding domain 90 276 4.0E-19 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3013 ec21a2b98f0a0e56c5ccfa9f7b28e8de 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.6E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 8.1E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 8.1E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 8.1E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 8.0E-14 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 175 1.5E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.9E-75 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 Gene3D G3DSA:2.102.10.10 43 190 1.4E-46 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VAB027_3271 91148d6bf5ae936b4f1d5af6edaac477 197 SUPERFAMILY SSF50022 30 192 1.41E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 269 5.5E-112 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 39.402 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 233 4.3E-42 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.40.50.620 3 282 2.3E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.40.50.620 78 216 2.3E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3251 1d41be3909cf4aa75f1c48debdaeb40b 296 SUPERFAMILY SSF52374 3 282 6.52E-85 T 14-10-2018 VAB027_235 b670e2899f5c62058edfd6317092af93 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 116 2.0E-59 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAB027_235 b670e2899f5c62058edfd6317092af93 120 Pfam PF02313 Fumarate reductase subunit D 6 118 1.3E-45 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAB027_235 b670e2899f5c62058edfd6317092af93 120 PIRSF PIRSF000179 1 120 2.9E-57 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAB027_235 b670e2899f5c62058edfd6317092af93 120 Gene3D G3DSA:1.20.1300.10 1 120 1.8E-45 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_235 b670e2899f5c62058edfd6317092af93 120 SUPERFAMILY SSF81343 2 120 2.4E-50 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_235 b670e2899f5c62058edfd6317092af93 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 24.793 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAB027_2922 6af912def04e62ceede00fb8db4c2638 353 Gene3D G3DSA:3.40.630.10 19 320 2.1E-95 T 14-10-2018 VAB027_2922 6af912def04e62ceede00fb8db4c2638 353 SUPERFAMILY SSF53187 25 319 5.62E-77 T 14-10-2018 VAB027_2922 6af912def04e62ceede00fb8db4c2638 353 PIRSF PIRSF039012 4 325 2.8E-93 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAB027_2922 6af912def04e62ceede00fb8db4c2638 353 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 3.5E-69 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 Gene3D G3DSA:3.90.1640.30 44 323 1.1E-88 T 14-10-2018 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 Pfam PF01368 DHH family 71 204 5.4E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 7.3E-158 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 Pfam PF02272 DHHA1 domain 319 451 4.6E-28 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 Gene3D G3DSA:3.10.310.30 325 451 1.4E-31 T 14-10-2018 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 Gene3D G3DSA:2.40.50.460 452 579 4.9E-8 T 14-10-2018 VAB027_3042 5e5dc203d21fa7f5162872fd426afb21 579 SUPERFAMILY SSF64182 45 463 2.49E-118 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 5.2E-20 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.2E-20 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 5.2E-20 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.2E-20 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.2E-20 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 Gene3D G3DSA:3.50.50.60 147 269 2.8E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 SUPERFAMILY SSF55424 349 467 1.44E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 SUPERFAMILY SSF51905 1 367 1.04E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 3.4E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.0E-40 T 14-10-2018 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 Gene3D G3DSA:3.30.390.30 347 470 7.9E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 Gene3D G3DSA:3.50.50.60 7 330 2.8E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 PIRSF PIRSF000350 1 467 1.7E-61 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 Gene3D G3DSA:1.10.287.990 37 107 2.8E-96 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_252 95704b2401ab1791bf159c2b6d6edc7f 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 3.7E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.10.10 464 540 2.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 8.1E-29 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 599 610 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 415 428 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 439 447 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 584 599 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 PRINTS PR00046 Major sigma-70 factor signature 563 575 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 624 45.754 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 415 428 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.601.10 113 460 1.1E-137 T 14-10-2018 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 387 612 1.2E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 584 610 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04542 Sigma-70 region 2 391 460 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04546 Sigma-70, non-essential region 139 360 1.8E-65 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.10.10 541 625 3.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 SUPERFAMILY SSF88659 464 537 2.25E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 SUPERFAMILY SSF88946 115 458 6.15E-97 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04539 Sigma-70 region 3 470 545 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Pfam PF04545 Sigma-70, region 4 559 612 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 387 623 2.7E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 Gene3D G3DSA:1.10.220.120 1 64 3.8E-30 T 14-10-2018 VAB027_3332 2cb7b83afd7d60f4057a7a31bf3482ab 625 SUPERFAMILY SSF88659 521 623 1.31E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_2341 507012b280ae4fee8b3dfacd7d819924 280 Pfam PF01226 Formate/nitrite transporter 14 275 1.0E-76 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAB027_2341 507012b280ae4fee8b3dfacd7d819924 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 1.3E-112 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VAB027_2341 507012b280ae4fee8b3dfacd7d819924 280 Gene3D G3DSA:1.20.1080.10 27 280 2.7E-102 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAB027_2341 507012b280ae4fee8b3dfacd7d819924 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 2.5E-80 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAB027_2341 507012b280ae4fee8b3dfacd7d819924 280 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAB027_2341 507012b280ae4fee8b3dfacd7d819924 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 SMART SM00388 230 295 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 SUPERFAMILY SSF55874 285 443 1.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 441 2.7E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 294 1.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 Pfam PF08521 Two-component sensor kinase N-terminal 2 153 6.9E-11 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 SMART SM00387 338 447 1.8E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 Gene3D G3DSA:1.10.287.130 181 292 3.4E-19 T 14-10-2018 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 2.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 2.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 2.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 SUPERFAMILY SSF47384 213 295 1.73E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1029 9dfbed2dd3379b34a31c72bdb7dd5f06 447 Gene3D G3DSA:3.30.565.10 293 444 6.0E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_276 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_276 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 SUPERFAMILY SSF53098 103 419 4.85E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_276 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VAB027_2649 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_2649 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 SUPERFAMILY SSF53098 103 419 4.85E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2649 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VAB027_1255 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_1255 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 SUPERFAMILY SSF53098 103 419 4.85E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1255 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VAB027_3512 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_3512 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 SUPERFAMILY SSF53098 103 419 4.85E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3512 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VAB027_1522 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_1522 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 SUPERFAMILY SSF53098 103 419 4.85E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1522 fbfccb019b4e9c7ef2e56bd5b2dd81e2 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 SUPERFAMILY SSF56519 57 253 4.05E-57 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.30.1390.30 86 161 3.2E-54 T 14-10-2018 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.40.710.10 250 633 1.5E-93 T 14-10-2018 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 53.107 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 1.6E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 1.2E-238 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.90.1310.10 65 249 3.2E-54 T 14-10-2018 VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 SUPERFAMILY SSF56601 255 619 2.33E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_1640 01e8920874dc574795fa4d49ac9ac677 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 6.2E-50 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VAB027_1795 a1819b1ee1a00185b6365b02beb321ec 265 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 19 264 2.4E-64 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VAB027_1795 a1819b1ee1a00185b6365b02beb321ec 265 Pfam PF08241 Methyltransferase domain 55 147 1.6E-27 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VAB027_1795 a1819b1ee1a00185b6365b02beb321ec 265 Gene3D G3DSA:3.40.50.150 17 214 4.6E-40 T 14-10-2018 VAB027_1795 a1819b1ee1a00185b6365b02beb321ec 265 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 11 265 32.749 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VAB027_1795 a1819b1ee1a00185b6365b02beb321ec 265 SUPERFAMILY SSF53335 17 246 3.04E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 SUPERFAMILY SSF81296 448 544 1.54E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 SUPERFAMILY SSF74650 72 442 3.77E-163 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 72 543 2.9E-193 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 22 545 56.036 T 14-10-2018 IPR023704 Glucan biosynthesis protein G VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 Gene3D G3DSA:2.70.98.10 71 445 3.9E-165 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 Gene3D G3DSA:2.60.40.10 447 545 5.1E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_1964 548ddf55889ab62d917f86898a0ffe71 545 PIRSF PIRSF006281 26 545 7.2E-211 T 14-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 599 39.746 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 ProSitePatterns PS00194 Thioredoxin family active site. 507 525 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 SUPERFAMILY SSF74863 39 152 6.93E-40 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 Gene3D G3DSA:3.40.30.10 472 598 3.3E-34 T 14-10-2018 VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 Pfam PF13899 Thioredoxin-like 488 552 5.7E-14 T 14-10-2018 VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 Pfam PF11412 Disulphide bond corrector protein DsbC 40 152 1.0E-29 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 207 407 6.3E-17 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 SUPERFAMILY SSF52833 485 596 2.34E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_193 dbe4ea78fffa25eff2408e6e10bc5fd6 600 Gene3D G3DSA:2.60.40.1250 34 168 1.2E-39 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VAB027_1322 478b60f700fc505337e867845f1b4f54 115 SUPERFAMILY SSF110857 3 114 2.62E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VAB027_1322 478b60f700fc505337e867845f1b4f54 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.7E-27 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VAB027_1322 478b60f700fc505337e867845f1b4f54 115 Gene3D G3DSA:3.10.490.10 4 115 1.1E-41 T 14-10-2018 VAB027_2438 7f70c321c93937a26edbda98347f4e94 180 Pfam PF03347 Vibrio thermostable direct hemolysin 20 179 3.0E-53 T 14-10-2018 IPR005015 Thermostable direct haemolysin, vibrio GO:0005576|GO:0019836 VAB027_2438 7f70c321c93937a26edbda98347f4e94 180 ProDom PD006802 DIRECT HEMOLYSIN THERMOSTABLE CYTOLYSIS TOXIN HEMOLYSIS PRECURSOR SIGNAL SEQUENCING TDH-RELATED 20 179 1.0E-49 T 14-10-2018 IPR005015 Thermostable direct haemolysin, vibrio GO:0005576|GO:0019836 VAB027_2438 7f70c321c93937a26edbda98347f4e94 180 Gene3D G3DSA:2.60.270.30 19 180 1.5E-82 T 14-10-2018 IPR038689 Thermostable direct haemolysin superfamily VAB027_3357 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 Gene3D G3DSA:3.30.420.140 1 138 3.9E-39 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VAB027_3357 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.4E-48 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VAB027_3357 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 SMART SM00732 3 104 4.5E-35 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VAB027_3357 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.321 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VAB027_3357 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 SUPERFAMILY SSF53098 3 137 3.64E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3357 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 Pfam PF03652 Holliday junction resolvase 4 136 1.5E-35 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 400 555 1.5E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 ProSitePatterns PS01176 Initiation factor 2 signature. 848 870 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 SUPERFAMILY SSF46955 3 50 1.68E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 315 897 4.3E-285 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 SUPERFAMILY SSF52540 391 565 1.99E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 SUPERFAMILY SSF50447 799 895 1.96E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Gene3D G3DSA:2.40.30.10 799 896 4.6E-34 T 14-10-2018 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Gene3D G3DSA:3.40.50.300 395 568 4.0E-70 T 14-10-2018 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 SUPERFAMILY SSF50447 571 652 1.27E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Gene3D G3DSA:3.40.50.10050 692 798 3.0E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Pfam PF00009 Elongation factor Tu GTP binding domain 401 558 5.4E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 322 372 4.8E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 1.8E-7 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Pfam PF11987 Translation-initiation factor 2 682 787 7.8E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Gene3D G3DSA:2.40.30.10 569 687 4.3E-41 T 14-10-2018 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Gene3D G3DSA:3.30.56.50 2 50 1.7E-24 T 14-10-2018 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 895 17.69 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 SUPERFAMILY SSF52156 675 804 5.89E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VAB027_3203 043b7430100b41c695e1219ddcc362c6 898 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 7.2E-16 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 SUPERFAMILY SSF56601 12 282 1.12E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 7.0E-26 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 SMART SM00936 282 372 2.1E-36 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 Gene3D G3DSA:2.60.410.10 283 372 1.4E-29 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 Gene3D G3DSA:3.40.710.10 32 282 4.7E-90 T 14-10-2018 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 262 1.6E-92 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 SUPERFAMILY SSF69189 282 374 1.88E-26 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.8E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_1637 afea99a37962a778d388a7b9b95217d4 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_1344 fa20057be57a1becab85fca54e0948e9 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1344 fa20057be57a1becab85fca54e0948e9 267 Gene3D G3DSA:3.40.50.300 4 253 1.8E-64 T 14-10-2018 VAB027_1344 fa20057be57a1becab85fca54e0948e9 267 SMART SM00382 31 227 8.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1344 fa20057be57a1becab85fca54e0948e9 267 Pfam PF00005 ABC transporter 23 170 2.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1344 fa20057be57a1becab85fca54e0948e9 267 SUPERFAMILY SSF52540 6 240 2.73E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3458 97764a40aa1c6e712b13ec65ea64e61c 392 SMART SM00849 101 313 0.0096 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_3458 97764a40aa1c6e712b13ec65ea64e61c 392 SUPERFAMILY SSF56281 96 338 2.03E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_3458 97764a40aa1c6e712b13ec65ea64e61c 392 Pfam PF12706 Beta-lactamase superfamily domain 113 314 3.5E-40 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_3458 97764a40aa1c6e712b13ec65ea64e61c 392 Gene3D G3DSA:3.60.15.10 78 362 2.1E-73 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_1042 4982d778b7988d2119303f6000475950 217 SUPERFAMILY SSF64438 33 188 2.38E-45 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VAB027_1042 4982d778b7988d2119303f6000475950 217 Gene3D G3DSA:3.30.1330.200 31 195 8.3E-48 T 14-10-2018 IPR038592 CheD-like superfamily VAB027_1042 4982d778b7988d2119303f6000475950 217 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 29 188 28.195 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VAB027_1042 4982d778b7988d2119303f6000475950 217 Pfam PF03975 CheD chemotactic sensory transduction 87 184 2.3E-29 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 6.8E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Gene3D G3DSA:2.40.40.20 705 828 2.8E-45 T 14-10-2018 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.483 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 8.8E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 7.3E-90 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 SUPERFAMILY SSF53706 38 699 3.27E-199 T 14-10-2018 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 SUPERFAMILY SSF50692 688 828 2.94E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAB027_491 3804e4a0a44eaef2ed7f77714eb83b3a 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_3270 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 9.8E-42 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VAB027_3270 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81648 297 411 1.0E-33 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VAB027_3270 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Gene3D G3DSA:1.20.810.10 1 421 1.3E-150 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VAB027_3270 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PIRSF PIRSF038885 1 421 3.1E-153 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VAB027_3270 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.1E-65 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VAB027_3270 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81342 6 296 2.67E-92 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAB027_85 71f13f8b08fb275abda1d90f8b407f4d 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.2E-67 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VAB027_85 71f13f8b08fb275abda1d90f8b407f4d 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.844 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VAB027_85 71f13f8b08fb275abda1d90f8b407f4d 284 Gene3D G3DSA:1.20.120.1780 167 284 5.4E-13 T 14-10-2018 VAB027_85 71f13f8b08fb275abda1d90f8b407f4d 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 5.9E-106 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VAB027_85 71f13f8b08fb275abda1d90f8b407f4d 284 Gene3D G3DSA:1.10.357.140 19 166 3.0E-42 T 14-10-2018 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 Gene3D G3DSA:3.30.70.1170 170 227 8.9E-28 T 14-10-2018 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 Gene3D G3DSA:1.10.940.10 1 142 9.8E-44 T 14-10-2018 IPR035926 NusB-like superfamily VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 SUPERFAMILY SSF53335 138 424 6.08E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 SUPERFAMILY SSF48013 1 146 6.8E-35 T 14-10-2018 IPR035926 NusB-like superfamily VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 Gene3D G3DSA:3.40.50.150 228 425 3.0E-72 T 14-10-2018 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 6.8E-156 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 Gene3D G3DSA:1.10.287.730 143 169 1.4E-11 T 14-10-2018 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 5.6E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 5.6E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 5.6E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 5.6E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 5.6E-31 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 Pfam PF01029 NusB family 1 123 8.2E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VAB027_32 fe9dbd88361404eb36905c3b11ddc09e 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 422 5.2E-70 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 Pfam PF14706 Transposase DNA-binding 9 65 5.9E-16 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 Gene3D G3DSA:3.90.350.10 66 347 1.4E-79 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 SUPERFAMILY SSF53098 1 460 1.14E-135 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 Gene3D G3DSA:1.10.740.10 348 458 2.9E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 Pfam PF01609 Transposase DDE domain 220 360 2.6E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 Gene3D G3DSA:1.10.246.40 2 65 5.2E-23 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VAB027_3339 d90aa25ff3ebe0bbf06acf0107e45bc1 462 Pfam PF02281 Transposase Tn5 dimerisation domain 369 455 4.8E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 116 1.7E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 1.4E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 2.5E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 62.443 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 1.4E-228 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF52343 259 403 6.55E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF63380 106 273 8.42E-35 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:3.40.50.80 276 394 9.0E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:2.40.30.10 127 265 2.0E-51 T 14-10-2018 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 PIRSF PIRSF000044 1 408 1.1E-219 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:3.10.20.30 35 126 2.9E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_2929 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF54292 38 125 6.56E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_2064 5cc9730099bc66a81b9f5fc97247b083 468 Pfam PF01979 Amidohydrolase family 82 431 2.2E-67 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAB027_2064 5cc9730099bc66a81b9f5fc97247b083 468 SUPERFAMILY SSF51338 28 454 2.29E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_2064 5cc9730099bc66a81b9f5fc97247b083 468 Gene3D G3DSA:3.20.20.140 86 375 5.3E-144 T 14-10-2018 VAB027_2064 5cc9730099bc66a81b9f5fc97247b083 468 SUPERFAMILY SSF51556 85 383 6.81E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_2064 5cc9730099bc66a81b9f5fc97247b083 468 Gene3D G3DSA:2.30.40.10 36 449 5.3E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 9 332 5.7E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PIRSF PIRSF000350 1 469 6.0E-83 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF51905 1 322 3.89E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.1E-66 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-41 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.6E-41 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.6E-41 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.6E-41 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.6E-41 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 150 271 5.7E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 8.5E-151 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.2E-68 T 14-10-2018 VAB027_3037 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 5.1E-109 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Gene3D G3DSA:2.40.110.10 177 300 2.7E-90 T 14-10-2018 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 SUPERFAMILY SSF47203 301 453 2.42E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 3.4E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 6.4E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Gene3D G3DSA:1.10.540.10 63 176 2.7E-90 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 SUPERFAMILY SSF56645 61 296 1.96E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Gene3D G3DSA:1.20.140.10 301 446 2.7E-90 T 14-10-2018 VAB027_2380 9ac80cfad0713432f2ea7257eb4800fb 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.2E-8 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 503 2.8E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 SUPERFAMILY SSF54211 314 506 1.25E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 Gene3D G3DSA:3.30.230.10 291 533 1.4E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.0E-11 T 14-10-2018 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.0E-11 T 14-10-2018 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.0E-11 T 14-10-2018 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.0E-11 T 14-10-2018 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 Pfam PF13654 AAA domain 79 287 1.5E-19 T 14-10-2018 VAB027_2128 7d0041f8a00e0d3a41a4326a16f0003d 549 Gene3D G3DSA:3.40.50.300 65 191 2.9E-7 T 14-10-2018 VAB027_960 2dc65db78857617c2c030ca1aeac63a7 768 SUPERFAMILY SSF49785 595 712 1.66E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_960 2dc65db78857617c2c030ca1aeac63a7 768 Gene3D G3DSA:2.60.120.260 616 747 6.3E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_960 2dc65db78857617c2c030ca1aeac63a7 768 Pfam PF01483 Proprotein convertase P-domain 629 713 3.8E-17 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VAB027_960 2dc65db78857617c2c030ca1aeac63a7 768 SUPERFAMILY SSF55486 169 485 8.66E-35 T 14-10-2018 VAB027_1450 e857c7b993744e9d12d77b98df71e904 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 5.2E-86 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 VAB027_1450 e857c7b993744e9d12d77b98df71e904 291 SUPERFAMILY SSF51621 2 235 4.54E-60 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_1450 e857c7b993744e9d12d77b98df71e904 291 PIRSF PIRSF015582 1 291 3.9E-75 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like VAB027_1450 e857c7b993744e9d12d77b98df71e904 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 285 2.0E-141 T 14-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 VAB027_1450 e857c7b993744e9d12d77b98df71e904 291 Gene3D G3DSA:3.20.20.60 1 289 7.0E-89 T 14-10-2018 VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 SUPERFAMILY SSF81901 65 177 6.02E-21 T 14-10-2018 VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 Gene3D G3DSA:1.25.40.10 22 211 5.2E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 SMART SM00671 72 107 0.015 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 SMART SM00671 108 143 2.9E-6 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 SMART SM00671 144 179 18.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 Pfam PF08238 Sel1 repeat 76 106 0.025 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1268 652b41264ff9835fd4ab721c0c7982b6 211 Pfam PF08238 Sel1 repeat 149 171 190.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_629 69fccf487d131763f3b722c761ea1345 497 Gene3D G3DSA:1.20.120.620 7 111 6.9E-11 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily VAB027_629 69fccf487d131763f3b722c761ea1345 497 Gene3D G3DSA:3.30.565.10 352 496 9.2E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_629 69fccf487d131763f3b722c761ea1345 497 SUPERFAMILY SSF47384 258 336 8.44E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_629 69fccf487d131763f3b722c761ea1345 497 SMART SM00387 379 488 1.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_629 69fccf487d131763f3b722c761ea1345 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 2.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_629 69fccf487d131763f3b722c761ea1345 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 2.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_629 69fccf487d131763f3b722c761ea1345 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 2.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_629 69fccf487d131763f3b722c761ea1345 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 2.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_629 69fccf487d131763f3b722c761ea1345 497 Gene3D G3DSA:1.10.287.130 261 335 9.0E-16 T 14-10-2018 VAB027_629 69fccf487d131763f3b722c761ea1345 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 486 3.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_629 69fccf487d131763f3b722c761ea1345 497 Pfam PF13493 Domain of unknown function (DUF4118) 12 116 1.8E-15 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain VAB027_629 69fccf487d131763f3b722c761ea1345 497 SMART SM00388 269 337 7.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_629 69fccf487d131763f3b722c761ea1345 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 334 6.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_629 69fccf487d131763f3b722c761ea1345 497 SUPERFAMILY SSF55874 327 490 3.93E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2045 46d072a40c63792f83f2b1417df007d0 338 Gene3D G3DSA:3.40.190.10 36 141 1.8E-10 T 14-10-2018 VAB027_2045 46d072a40c63792f83f2b1417df007d0 338 Gene3D G3DSA:3.40.190.10 143 316 1.1E-11 T 14-10-2018 VAB027_2045 46d072a40c63792f83f2b1417df007d0 338 SUPERFAMILY SSF53850 42 262 1.66E-30 T 14-10-2018 VAB027_2045 46d072a40c63792f83f2b1417df007d0 338 Pfam PF09084 NMT1/THI5 like 53 261 6.6E-21 T 14-10-2018 IPR015168 SsuA/THI5-like VAB027_880 37e85195a5ca7ad4229708bf308a2d01 498 Pfam PF00361 Proton-conducting membrane transporter 129 415 2.8E-59 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_880 37e85195a5ca7ad4229708bf308a2d01 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.3E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_880 37e85195a5ca7ad4229708bf308a2d01 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.3E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_880 37e85195a5ca7ad4229708bf308a2d01 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.3E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_880 37e85195a5ca7ad4229708bf308a2d01 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.3E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_880 37e85195a5ca7ad4229708bf308a2d01 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.3E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 SUPERFAMILY SSF53738 27 235 1.74E-53 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Gene3D G3DSA:3.40.120.10 221 318 3.2E-45 T 14-10-2018 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 SUPERFAMILY SSF53738 209 317 2.12E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Gene3D G3DSA:3.40.120.10 319 442 1.2E-34 T 14-10-2018 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Gene3D G3DSA:3.40.120.10 12 218 2.5E-74 T 14-10-2018 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 SUPERFAMILY SSF55957 432 544 1.15E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 3.1E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Gene3D G3DSA:3.30.310.50 443 546 1.2E-35 T 14-10-2018 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 SUPERFAMILY SSF53738 305 447 8.54E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 4.4E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 535 2.3E-6 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2731 bbabcf1af2d1b35d57a1fb81e7a12b80 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 181 4.4E-40 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 Gene3D G3DSA:3.30.70.270 500 679 1.2E-45 T 14-10-2018 VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 Gene3D G3DSA:3.30.450.40 164 318 7.0E-9 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 SUPERFAMILY SSF55073 519 678 5.34E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 677 8.6E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 SMART SM00267 503 680 2.9E-46 T 14-10-2018 IPR000160 GGDEF domain VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 SUPERFAMILY SSF55781 161 315 1.2E-8 T 14-10-2018 VAB027_871 34910cf6e8e1ebecc550618673e457a8 692 Pfam PF00990 Diguanylate cyclase, GGDEF domain 514 676 3.2E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_3592 ee674080be782f8eb5b3237ea2058b84 347 Pfam PF02719 Polysaccharide biosynthesis protein 9 284 1.3E-105 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VAB027_3592 ee674080be782f8eb5b3237ea2058b84 347 SUPERFAMILY SSF51735 1 265 1.08E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3592 ee674080be782f8eb5b3237ea2058b84 347 Gene3D G3DSA:3.90.25.30 168 323 1.3E-134 T 14-10-2018 VAB027_3592 ee674080be782f8eb5b3237ea2058b84 347 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 287 333 1.2E-21 T 14-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 VAB027_3592 ee674080be782f8eb5b3237ea2058b84 347 Gene3D G3DSA:3.40.50.720 7 311 1.3E-134 T 14-10-2018 VAB027_292 dd30609f44d6af5b9a4057eda8a26163 834 Gene3D G3DSA:2.160.20.10 220 377 1.8E-5 T 14-10-2018 IPR012334 Pectin lyase fold VAB027_292 dd30609f44d6af5b9a4057eda8a26163 834 SUPERFAMILY SSF51126 178 445 1.67E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF13328 HD domain 56 190 1.1E-37 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF81301 195 407 3.11E-61 T 14-10-2018 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF02824 TGS domain 403 462 3.3E-22 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.30.460.10 208 340 1.3E-49 T 14-10-2018 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 SMART SM00954 250 360 1.6E-63 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.10.20.30 397 470 1.8E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF55021 661 736 3.58E-11 T 14-10-2018 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.30.70.260 659 738 3.2E-16 T 14-10-2018 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF81271 396 462 2.83E-21 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF13291 ACT domain 660 736 2.3E-16 T 14-10-2018 IPR002912 ACT domain VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.7E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF109604 32 205 1.69E-43 T 14-10-2018 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 736 1.8E-185 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 VAB027_3077 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:1.10.3210.10 51 205 1.5E-36 T 14-10-2018 VAB027_3051 6541bc991754f02018a933493206ee56 408 Gene3D G3DSA:1.20.81.30 60 175 1.6E-29 T 14-10-2018 VAB027_3051 6541bc991754f02018a933493206ee56 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VAB027_3051 6541bc991754f02018a933493206ee56 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 3.1E-31 T 14-10-2018 IPR018076 Type II secretion system F domain VAB027_3051 6541bc991754f02018a933493206ee56 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 1.3E-27 T 14-10-2018 IPR018076 Type II secretion system F domain VAB027_3051 6541bc991754f02018a933493206ee56 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 5.6E-20 T 14-10-2018 IPR003004 GspF/PilC family VAB027_3051 6541bc991754f02018a933493206ee56 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 5.6E-20 T 14-10-2018 IPR003004 GspF/PilC family VAB027_3051 6541bc991754f02018a933493206ee56 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 5.6E-20 T 14-10-2018 IPR003004 GspF/PilC family VAB027_3051 6541bc991754f02018a933493206ee56 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 5.6E-20 T 14-10-2018 IPR003004 GspF/PilC family VAB027_3051 6541bc991754f02018a933493206ee56 408 Gene3D G3DSA:1.20.81.30 260 371 7.0E-27 T 14-10-2018 VAB027_2871 f02a6dc433e4c0dca5066e3463230d31 281 SUPERFAMILY SSF56235 2 253 1.16E-50 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_2871 f02a6dc433e4c0dca5066e3463230d31 281 Gene3D G3DSA:3.60.20.10 1 258 6.6E-100 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_2871 f02a6dc433e4c0dca5066e3463230d31 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 5.0E-114 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VAB027_131 e04aea8223e24cfcfd0c6deb509d52fc 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 7 116 2.0E-57 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VAB027_131 e04aea8223e24cfcfd0c6deb509d52fc 123 Pfam PF07226 Protein of unknown function (DUF1422) 9 119 8.0E-49 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VAB027_447 9637034ac9ae0f793574efde9634b66e 613 Pfam PF13289 SIR2-like domain 161 291 3.3E-19 T 14-10-2018 IPR039444 SIR2-like domain VAB027_447 9637034ac9ae0f793574efde9634b66e 613 SUPERFAMILY SSF52467 7 217 1.53E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 SUPERFAMILY SSF46955 1 57 7.69E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 SUPERFAMILY SSF46689 60 156 2.69E-30 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Gene3D G3DSA:3.30.420.10 237 476 4.9E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Gene3D G3DSA:1.10.10.60 62 150 3.2E-24 T 14-10-2018 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 SUPERFAMILY SSF50610 471 548 7.72E-20 T 14-10-2018 IPR009004 Transposase, Mu, C-terminal VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Pfam PF02914 Bacteriophage Mu transposase 248 461 5.0E-108 T 14-10-2018 IPR004189 Bacteriophage Mu, transposase GO:0003677|GO:0004803|GO:0006313|GO:0015074 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Pfam PF09039 Mu DNA binding, I gamma subdomain 135 245 1.3E-40 T 14-10-2018 IPR015126 Mu DNA binding, I gamma subdomain VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 254 468 1.0E-98 T 14-10-2018 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 SUPERFAMILY SSF53098 249 468 1.06E-73 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Gene3D G3DSA:1.10.10.60 166 231 2.8E-25 T 14-10-2018 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Gene3D G3DSA:2.30.30.130 481 548 2.6E-25 T 14-10-2018 IPR009004 Transposase, Mu, C-terminal VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 SUPERFAMILY SSF46689 164 236 1.47E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Gene3D G3DSA:1.10.10.10 1 61 1.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1556 16276ff7ecd4aa8ca62b3b8a2c3668c1 654 Pfam PF09299 Mu transposase, C-terminal 476 545 1.9E-12 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal VAB027_1265 70a9b98124b69d55ae7f0c2a452e1160 201 SUPERFAMILY SSF54534 2 140 1.49E-35 T 14-10-2018 VAB027_1265 70a9b98124b69d55ae7f0c2a452e1160 201 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 2.9E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAB027_1265 70a9b98124b69d55ae7f0c2a452e1160 201 Gene3D G3DSA:3.10.50.40 3 154 3.7E-60 T 14-10-2018 VAB027_1265 70a9b98124b69d55ae7f0c2a452e1160 201 Gene3D G3DSA:2.40.10.330 71 121 3.7E-60 T 14-10-2018 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 Gene3D G3DSA:1.10.10.10 1 86 3.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 SUPERFAMILY SSF53850 91 322 6.3E-41 T 14-10-2018 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 Gene3D G3DSA:3.40.190.10 167 267 1.1E-97 T 14-10-2018 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 Pfam PF03466 LysR substrate binding domain 91 292 1.5E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 SUPERFAMILY SSF46785 1 87 4.42E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2552 99720d66d90d8850bce28b8bac91de35 324 Gene3D G3DSA:3.40.190.10 93 303 1.1E-97 T 14-10-2018 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 SUPERFAMILY SSF52540 155 384 7.99E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Gene3D G3DSA:3.40.50.2300 14 145 1.3E-29 T 14-10-2018 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 SMART SM00448 16 127 6.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Pfam PF00158 Sigma-54 interaction domain 155 321 1.6E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 4.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Gene3D G3DSA:3.40.50.300 146 325 6.5E-63 T 14-10-2018 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 SUPERFAMILY SSF52172 16 199 1.24E-37 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Gene3D G3DSA:1.10.8.60 326 406 1.3E-16 T 14-10-2018 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 SMART SM00382 175 318 5.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Gene3D G3DSA:1.10.10.60 429 474 4.3E-12 T 14-10-2018 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 SUPERFAMILY SSF46689 367 474 4.48E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2168 35e71ae85c0be511f9e4bba833de339a 484 Pfam PF00072 Response regulator receiver domain 18 128 2.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 PIRSF PIRSF000148 1 370 1.1E-65 T 14-10-2018 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 3.3E-189 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 SUPERFAMILY SSF55347 133 354 5.3E-79 T 14-10-2018 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 118 2.4E-22 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.892 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 Gene3D G3DSA:3.30.360.10 134 350 3.1E-151 T 14-10-2018 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 SMART SM00859 2 121 2.8E-20 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 Gene3D G3DSA:3.40.50.720 3 356 3.1E-151 T 14-10-2018 VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 SUPERFAMILY SSF51735 1 146 1.36E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2672 aa52a7b14ec7c8cdad100b7e68255c11 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.0E-58 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_3214 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SMART SM01103 3 86 3.0E-40 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VAB027_3214 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Gene3D G3DSA:3.30.110.60 1 98 2.1E-36 T 14-10-2018 IPR035920 YhbY-like superfamily VAB027_3214 63851d7bfeb3e2b93d8f50ec9992bfb1 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VAB027_3214 63851d7bfeb3e2b93d8f50ec9992bfb1 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VAB027_3214 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SUPERFAMILY SSF75471 1 94 3.4E-30 T 14-10-2018 IPR035920 YhbY-like superfamily VAB027_3214 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.0E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 SUPERFAMILY SSF57783 109 146 1.7E-5 T 14-10-2018 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 SUPERFAMILY SSF57783 16 64 1.87E-14 T 14-10-2018 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 SUPERFAMILY SSF57783 66 101 5.27E-13 T 14-10-2018 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 Gene3D G3DSA:3.30.65.10 62 110 1.1E-8 T 14-10-2018 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 Gene3D G3DSA:3.30.65.10 10 61 7.3E-8 T 14-10-2018 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 9.5E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 151 1.2E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 102 4.9E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAB027_38 829f5a1c808f8e71471570f5b5e17e15 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 154 179 0.98 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 634 2.8E-279 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 SUPERFAMILY SSF51419 66 348 4.11E-65 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 1.8E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 6.0E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 6.0E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 6.0E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 6.0E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 Gene3D G3DSA:3.20.20.10 67 351 4.3E-238 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 PIRSF PIRSF001336 2 636 2.3E-251 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 77 346 2.5E-52 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 635 42.501 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 Gene3D G3DSA:1.20.58.930 368 463 4.3E-238 T 14-10-2018 VAB027_369 f896654792845e5685cc8ad7c68f2e3c 636 Gene3D G3DSA:2.40.37.10 14 572 4.3E-238 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_2190 d62522bc839b6134a14df9c7fa424f01 458 PIRSF PIRSF037714 1 456 2.9E-165 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VAB027_2190 d62522bc839b6134a14df9c7fa424f01 458 Pfam PF01618 MotA/TolQ/ExbB proton channel family 311 430 3.8E-30 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 SUPERFAMILY SSF48300 4 57 1.83E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 Gene3D G3DSA:3.30.1390.10 51 121 5.7E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.92 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 9.5E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 121 2.0E-12 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 Gene3D G3DSA:1.20.5.710 2 50 4.9E-24 T 14-10-2018 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.9E-14 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.6E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3515 24ea524c82cacce75561093fc1c7c09d 121 SUPERFAMILY SSF54736 50 121 3.84E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 5.7E-68 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 Gene3D G3DSA:3.30.70.1350 207 290 4.4E-31 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 SUPERFAMILY SSF161111 8 207 3.92E-50 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.2E-26 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 SUPERFAMILY SSF160240 210 287 6.15E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 Gene3D G3DSA:1.20.1510.10 8 206 3.8E-59 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAB027_206 869fe37418d4ea37e19941ca86152e3e 301 Pfam PF01545 Cation efflux family 15 206 2.9E-41 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAB027_3603 211f9363e0842aabec02087cf1dd44a8 392 SUPERFAMILY SSF53756 5 376 1.96E-95 T 14-10-2018 VAB027_3603 211f9363e0842aabec02087cf1dd44a8 392 Gene3D G3DSA:3.40.50.2000 7 369 5.1E-90 T 14-10-2018 VAB027_3603 211f9363e0842aabec02087cf1dd44a8 392 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 1.5E-92 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_3603 211f9363e0842aabec02087cf1dd44a8 392 Gene3D G3DSA:3.40.50.2000 193 359 5.1E-90 T 14-10-2018 VAB027_3603 211f9363e0842aabec02087cf1dd44a8 392 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 372 4.5E-146 T 14-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 385 38.086 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 SMART SM00865 207 325 8.0E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.8E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 6.4E-136 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 SUPERFAMILY SSF52490 13 208 6.8E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 8.1E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 Gene3D G3DSA:3.40.50.1440 5 220 1.4E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 SUPERFAMILY SSF55307 204 320 8.93E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 Gene3D G3DSA:3.30.1330.20 221 327 1.5E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 SMART SM00864 13 205 4.1E-111 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAB027_3024 084b83ff12efebbe332190aa4548c0fa 398 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 Gene3D G3DSA:3.20.20.10 13 220 1.7E-133 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 SUPERFAMILY SSF50621 230 361 3.17E-48 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 Hamap MF_01201 Alanine racemase. 4 360 35.684 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 Gene3D G3DSA:2.40.37.10 11 355 1.7E-133 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 252 267 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 158 169 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 195 222 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 29 45 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 123 135 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 342 355 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 63 81 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 269 284 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 PRINTS PR00992 Alanine racemase signature 290 307 2.7E-72 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 SMART SM01005 236 360 1.5E-68 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 1.4E-71 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 SUPERFAMILY SSF51419 11 237 7.33E-71 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 8.9E-44 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3461 47db36bde0c52b8ba77061f78a1777cf 364 TIGRFAM TIGR00492 alr: alanine racemase 6 359 2.1E-130 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 Gene3D G3DSA:3.30.750.70 70 135 9.7E-7 T 14-10-2018 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 Gene3D G3DSA:1.10.10.10 1 69 1.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 SMART SM01134 72 234 1.1E-68 T 14-10-2018 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 SMART SM00420 6 58 1.7E-27 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.2E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.2E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 SUPERFAMILY SSF46785 5 70 1.24E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 SUPERFAMILY SSF100950 74 234 4.28E-28 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.4E-24 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_1183 03b1b44ce46ff756b232b99cb3b915f8 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 1.6E-53 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VAB027_161 758a727afd4323882de8f5208fb06caa 503 Gene3D G3DSA:3.40.50.300 229 503 3.5E-132 T 14-10-2018 VAB027_161 758a727afd4323882de8f5208fb06caa 503 SUPERFAMILY SSF52540 110 500 1.63E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_161 758a727afd4323882de8f5208fb06caa 503 SMART SM00382 256 379 3.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_161 758a727afd4323882de8f5208fb06caa 503 Gene3D G3DSA:3.30.300.160 1 93 4.7E-50 T 14-10-2018 VAB027_161 758a727afd4323882de8f5208fb06caa 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 500 7.7E-238 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VAB027_161 758a727afd4323882de8f5208fb06caa 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 323 337 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_161 758a727afd4323882de8f5208fb06caa 503 Gene3D G3DSA:3.30.450.90 94 228 5.1E-56 T 14-10-2018 VAB027_161 758a727afd4323882de8f5208fb06caa 503 SUPERFAMILY SSF160246 15 81 7.32E-16 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VAB027_161 758a727afd4323882de8f5208fb06caa 503 Pfam PF00437 Type II/IV secretion system protein 130 395 8.0E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SUPERFAMILY SSF56719 395 796 6.54E-88 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF00204 DNA gyrase B 221 391 2.3E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.10.20.690 593 684 6.4E-38 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.30.565.10 1 220 1.3E-94 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.40.50.670 705 804 4.5E-27 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SUPERFAMILY SSF55874 4 213 1.57E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 109.225 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 6.1E-31 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SUPERFAMILY SSF54211 221 393 3.41E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 3.6E-71 T 14-10-2018 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF01751 Toprim domain 420 532 1.1E-18 T 14-10-2018 IPR006171 TOPRIM domain VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.30.230.10 221 393 5.0E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.2E-87 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Gene3D G3DSA:3.40.50.670 399 571 2.4E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SMART SM00387 31 175 3.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 8.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_4 c97d5ed1b84c2de4dffa924a1fc0e7ae 805 SMART SM00433 35 798 6.2E-275 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3368 d9ac2430538af23f0b965cf4fe019461 391 Gene3D G3DSA:3.80.30.20 2 309 3.8E-98 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_3368 d9ac2430538af23f0b965cf4fe019461 391 Pfam PF04055 Radical SAM superfamily 11 181 4.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_3368 d9ac2430538af23f0b965cf4fe019461 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.5E-136 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VAB027_3368 d9ac2430538af23f0b965cf4fe019461 391 SMART SM00729 6 227 5.1E-57 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_3368 d9ac2430538af23f0b965cf4fe019461 391 Pfam PF06969 HemN C-terminal domain 314 374 1.9E-10 T 14-10-2018 IPR010723 HemN, C-terminal VAB027_3368 d9ac2430538af23f0b965cf4fe019461 391 SUPERFAMILY SSF102114 4 386 3.66E-113 T 14-10-2018 VAB027_3372 a3795d687267e4e464a1ae01baac56ac 90 PIRSF PIRSF029827 1 90 1.5E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAB027_3372 a3795d687267e4e464a1ae01baac56ac 90 SUPERFAMILY SSF111148 1 89 1.83E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VAB027_3372 a3795d687267e4e464a1ae01baac56ac 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAB027_3372 a3795d687267e4e464a1ae01baac56ac 90 Gene3D G3DSA:1.10.3880.10 1 90 5.3E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VAB027_3372 a3795d687267e4e464a1ae01baac56ac 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.388 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAB027_3372 a3795d687267e4e464a1ae01baac56ac 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.5E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAB027_949 f7ccfeef53391c35ae5f5a22ba21a3f4 553 Pfam PF00916 Sulfate permease family 20 383 2.2E-86 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAB027_949 f7ccfeef53391c35ae5f5a22ba21a3f4 553 Pfam PF01740 STAS domain 442 536 2.0E-17 T 14-10-2018 IPR002645 STAS domain VAB027_949 f7ccfeef53391c35ae5f5a22ba21a3f4 553 SUPERFAMILY SSF52091 441 542 1.0E-17 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_949 f7ccfeef53391c35ae5f5a22ba21a3f4 553 Gene3D G3DSA:3.30.750.24 423 551 6.9E-35 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_647 29a147e2a4caf862e9148755f9b5a922 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 3.4E-182 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VAB027_647 29a147e2a4caf862e9148755f9b5a922 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VAB027_647 29a147e2a4caf862e9148755f9b5a922 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.3E-198 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VAB027_647 29a147e2a4caf862e9148755f9b5a922 706 SUPERFAMILY SSF51998 121 687 2.75E-195 T 14-10-2018 VAB027_647 29a147e2a4caf862e9148755f9b5a922 706 Gene3D G3DSA:3.20.70.20 121 687 5.6E-233 T 14-10-2018 VAB027_647 29a147e2a4caf862e9148755f9b5a922 706 Pfam PF03477 ATP cone domain 4 89 1.4E-21 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Gene3D G3DSA:2.60.40.10 240 331 1.1E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Gene3D G3DSA:2.60.40.10 138 228 1.2E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 SUPERFAMILY SSF54556 650 773 1.61E-9 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 SMART SM00636 356 803 2.1E-117 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Gene3D G3DSA:3.20.20.80 775 803 1.8E-10 T 14-10-2018 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Pfam PF06483 Chitinase C 812 979 3.7E-61 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 SMART SM00495 1014 1056 2.4E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Gene3D G3DSA:3.10.50.10 750 774 1.8E-10 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Gene3D G3DSA:2.10.10.20 1007 1058 5.6E-12 T 14-10-2018 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 SUPERFAMILY SSF51445 349 806 4.74E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 ProSitePatterns PS01095 Chitinases family 18 active site. 492 500 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Gene3D G3DSA:3.20.20.80 339 673 3.5E-83 T 14-10-2018 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 SUPERFAMILY SSF51055 1004 1058 8.63E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Pfam PF14600 Cellulose-binding domain 1017 1056 4.0E-8 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VAB027_1756 af0db0d091d34a67c1c8151d4f0d1f77 1059 Pfam PF00704 Glycosyl hydrolases family 18 357 803 6.2E-80 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 SUPERFAMILY SSF50249 2 125 1.37E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.4E-131 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:2.30.30.30 115 195 6.8E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 SMART SM01383 42 118 4.0E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.2E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:4.10.950.10 196 274 1.5E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 SUPERFAMILY SSF50104 127 272 6.02E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.1E-55 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 PIRSF PIRSF002158 13 274 3.2E-102 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 SMART SM01382 124 252 2.2E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.088 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VAB027_1276 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:2.40.50.140 1 114 3.5E-50 T 14-10-2018 VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 Gene3D G3DSA:3.30.230.70 10 236 1.3E-62 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.4E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.7E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.006 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 SUPERFAMILY SSF54211 1 181 1.47E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 8.0E-113 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VAB027_3640 c7bdca2cfb00744c322e3c7bb59ab44b 238 SUPERFAMILY SSF55666 153 234 1.44E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_550 e804995480f687c5167759a5a91edd2e 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.67 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAB027_550 e804995480f687c5167759a5a91edd2e 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAB027_550 e804995480f687c5167759a5a91edd2e 217 Gene3D G3DSA:3.30.1130.10 85 217 7.9E-52 T 14-10-2018 VAB027_550 e804995480f687c5167759a5a91edd2e 217 SUPERFAMILY SSF55620 9 216 9.64E-75 T 14-10-2018 VAB027_550 e804995480f687c5167759a5a91edd2e 217 Gene3D G3DSA:1.10.286.10 1 84 7.9E-36 T 14-10-2018 VAB027_550 e804995480f687c5167759a5a91edd2e 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAB027_550 e804995480f687c5167759a5a91edd2e 217 Pfam PF01227 GTP cyclohydrolase I 38 215 1.0E-64 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAB027_550 e804995480f687c5167759a5a91edd2e 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 8.2E-81 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 SMART SM00436 129 224 7.8E-32 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 SMART SM00437 284 563 9.1E-88 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 70.99 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Pfam PF01751 Toprim domain 4 135 3.5E-16 T 14-10-2018 IPR006171 TOPRIM domain VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 SMART SM00493 2 125 5.7E-27 T 14-10-2018 IPR006171 TOPRIM domain VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Pfam PF01131 DNA topoisomerase 159 598 6.7E-114 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 SUPERFAMILY SSF56712 3 611 1.96E-183 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.1E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.1E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.1E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.1E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.1E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Gene3D G3DSA:1.10.290.10 293 422 3.3E-162 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 7.1E-237 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Gene3D G3DSA:1.10.460.10 163 607 3.3E-162 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Gene3D G3DSA:2.70.20.10 218 493 3.3E-162 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VAB027_2681 1db9068973f72c19815d5bfba0a6fea6 647 Gene3D G3DSA:3.40.50.140 2 157 2.9E-61 T 14-10-2018 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.420.40 179 365 1.9E-169 T 14-10-2018 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF100920 383 539 1.12E-59 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF53067 1 182 2.36E-66 T 14-10-2018 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.420.40 5 378 1.9E-169 T 14-10-2018 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 630 36.452 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF53067 186 381 7.13E-67 T 14-10-2018 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:2.60.34.10 382 522 1.7E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF100934 534 608 3.45E-5 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.90.640.10 228 315 1.9E-169 T 14-10-2018 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:1.20.1270.10 523 602 6.9E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 8.4E-288 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 Pfam PF00012 Hsp70 protein 4 601 7.9E-265 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1497 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 Pfam PF10509 Galactokinase galactose-binding signature 11 59 3.6E-23 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 SUPERFAMILY SSF55060 206 382 4.0E-52 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 Hamap MF_00246 Galactokinase [galK]. 26 382 44.139 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PIRSF PIRSF000530 1 385 1.7E-126 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 Pfam PF08544 GHMP kinases C terminal 280 362 1.7E-12 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 Pfam PF00288 GHMP kinases N terminal domain 115 182 6.0E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 SUPERFAMILY SSF54211 2 203 1.59E-65 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 Gene3D G3DSA:3.30.230.10 23 202 6.9E-133 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 6.9E-147 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00959 Mevalonate kinase family signature 26 50 7.2E-44 T 14-10-2018 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00959 Mevalonate kinase family signature 120 142 7.2E-44 T 14-10-2018 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00959 Mevalonate kinase family signature 329 346 7.2E-44 T 14-10-2018 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00959 Mevalonate kinase family signature 163 182 7.2E-44 T 14-10-2018 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00473 Galactokinase signature 113 131 3.9E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00473 Galactokinase signature 28 46 3.9E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00473 Galactokinase signature 93 104 3.9E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 PRINTS PR00473 Galactokinase signature 264 278 3.9E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VAB027_2240 9c0dc577e12d519dbb554092a96e3ae5 388 Gene3D G3DSA:3.30.70.890 203 358 6.9E-133 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 Gene3D G3DSA:3.40.50.1000 7 270 2.5E-98 T 14-10-2018 IPR023214 HAD superfamily VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 270 139.954 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 SUPERFAMILY SSF56784 5 259 3.22E-54 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 204 1.7E-8 T 14-10-2018 VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 5 258 1.9E-114 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 36 204 1.1E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_558 d8606b811a8ddbd1b964d58c583093a5 270 Gene3D G3DSA:1.10.150.240 23 101 2.5E-98 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_9 9231825506a10c44973db59cbad3c698 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 400 419 6.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 6.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 252 267 6.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 6.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 324 340 6.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 SUPERFAMILY SSF109604 356 495 3.45E-12 T 14-10-2018 VAB027_9 9231825506a10c44973db59cbad3c698 695 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 694 1.3E-278 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 556 1.5E-194 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 693 25.131 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_9 9231825506a10c44973db59cbad3c698 695 Pfam PF05746 DALR anticodon binding domain 587 684 8.0E-10 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VAB027_1078 64fd580e62f05eb6a1c0bf1965a8ff9f 178 Gene3D G3DSA:3.40.50.850 2 177 1.1E-38 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_1078 64fd580e62f05eb6a1c0bf1965a8ff9f 178 SUPERFAMILY SSF52499 2 166 2.75E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_1078 64fd580e62f05eb6a1c0bf1965a8ff9f 178 Pfam PF00857 Isochorismatase family 4 164 9.9E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 6.6E-24 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 2.7E-24 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 Gene3D G3DSA:3.40.1020.10 333 510 5.6E-71 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 Gene3D G3DSA:3.40.50.1100 56 152 1.1E-133 T 14-10-2018 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 SUPERFAMILY SSF53686 10 360 2.75E-105 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_16 51b9c22472760c195b5e24fbacde35da 510 SUPERFAMILY SSF55021 415 508 2.08E-26 T 14-10-2018 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 SUPERFAMILY SSF55021 332 418 3.2E-27 T 14-10-2018 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 Gene3D G3DSA:3.40.50.1100 20 322 1.1E-133 T 14-10-2018 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 3.9E-250 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAB027_16 51b9c22472760c195b5e24fbacde35da 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 5.0E-83 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 SUPERFAMILY SSF56235 13 429 4.07E-148 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Gene3D G3DSA:2.160.20.60 1201 1468 1.1E-100 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Pfam PF04898 Glutamate synthase central domain 458 738 6.0E-104 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 SUPERFAMILY SSF51395 434 1191 1.06E-250 T 14-10-2018 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Gene3D G3DSA:3.20.20.70 782 1200 4.3E-183 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 SUPERFAMILY SSF69336 1212 1465 6.93E-88 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Gene3D G3DSA:3.60.20.10 13 436 5.9E-165 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Gene3D G3DSA:3.20.20.70 437 781 1.6E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Pfam PF01493 GXGXG motif 1236 1420 3.3E-73 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 5.4E-153 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VAB027_3005 71803bd85008a4acd8f9798f7401ef59 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.6E-178 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VAB027_1461 284646cfac6c4b2f62c5297847cfd94f 473 Pfam PF01420 Type I restriction modification DNA specificity domain 64 193 1.1E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAB027_1461 284646cfac6c4b2f62c5297847cfd94f 473 Pfam PF01420 Type I restriction modification DNA specificity domain 264 414 3.6E-20 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAB027_1461 284646cfac6c4b2f62c5297847cfd94f 473 SUPERFAMILY SSF116734 4 208 2.13E-36 T 14-10-2018 VAB027_1461 284646cfac6c4b2f62c5297847cfd94f 473 SUPERFAMILY SSF116734 250 461 9.48E-42 T 14-10-2018 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Gene3D G3DSA:1.20.58.1190 2559 2650 1.3E-25 T 14-10-2018 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF16671 Actin cross-linking domain 1973 2358 4.3E-238 T 14-10-2018 IPR032074 Actin cross-linking domain GO:0090527 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Gene3D G3DSA:1.10.3680.20 2160 2296 3.0E-69 T 14-10-2018 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 SUPERFAMILY SSF49785 1458 1595 2.98E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Gene3D G3DSA:3.40.50.11050 3408 3637 1.2E-92 T 14-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 581 598 0.97 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1160 1176 1.4 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 758 768 8.1 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 817 832 0.077 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1217 1233 3.2 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 621 638 0.045 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 161 184 7.9E-4 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1122 1139 2.1 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1181 1196 0.025 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 601 617 7.6 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 779 795 0.17 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 969 981 6.9 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 836 852 0.2 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 141 157 0.014 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1239 1253 37.0 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 893 907 3.7 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1107 1119 5.8 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 988 1003 0.041 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 931 947 8.9 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1293 1310 0.0072 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 275 291 0.5 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 255 272 3.2 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 101 118 0.33 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1198 1214 0.015 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 207 224 0.5 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 874 888 0.18 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1312 1329 1.1 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 738 750 26.0 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1141 1156 0.36 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 855 868 3.1 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 912 929 0.61 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 798 813 0.049 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1255 1272 6.3 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1064 1076 5.2 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 187 204 0.31 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 641 655 3.5 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 121 138 0.013 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1028 1040 0.37 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF07634 RtxA repeat 1084 1099 0.24 T 14-10-2018 IPR011509 RtxA toxin VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 SUPERFAMILY SSF51120 4267 4473 3.27E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 SUPERFAMILY SSF158842 2548 2791 3.92E-57 T 14-10-2018 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Gene3D G3DSA:2.160.20.160 4239 4423 9.2E-20 T 14-10-2018 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Gene3D G3DSA:3.40.50.1820 3121 3333 1.2E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF12146 Serine aminopeptidase, S33 3181 3295 6.6E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF11647 Membrane Localization Domain 2564 2633 6.2E-25 T 14-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 SUPERFAMILY SSF53474 3173 3292 4.05E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 SUPERFAMILY SSF51120 4182 4274 9.94E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Gene3D G3DSA:2.60.120.260 1455 1598 1.2E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_2124 1ab6ea5af42e67047d73878ba99ebed7 4545 Pfam PF11713 Peptidase C80 family 3456 3613 8.0E-54 T 14-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 416 590 1.7E-48 T 14-10-2018 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 268 415 5.1E-50 T 14-10-2018 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF46600 627 672 9.68E-11 T 14-10-2018 IPR036876 UVR domain superfamily VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF52540 3 416 1.13E-137 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 119 2.4E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.6E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 SMART SM00487 9 426 5.0E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 1 232 5.0E-74 T 14-10-2018 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 SMART SM00490 461 547 9.9E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF00271 Helicase conserved C-terminal domain 442 545 1.8E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF52540 37 582 1.3E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:4.10.860.10 631 676 5.8E-21 T 14-10-2018 VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.4E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VAB027_1703 ad973f20e0f77caaa22f3e74f2e1223a 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.047 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 SUPERFAMILY SSF56037 321 433 7.85E-26 T 14-10-2018 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 305 23.185 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 Gene3D G3DSA:1.20.59.20 232 316 4.6E-28 T 14-10-2018 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 201 1.2E-53 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 Gene3D G3DSA:3.40.50.620 14 231 1.0E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 Pfam PF09179 TilS substrate binding domain 246 313 1.1E-18 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 408 5.4E-15 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 Pfam PF01171 PP-loop family 20 198 8.8E-63 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 SMART SM00977 362 431 2.0E-21 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 SUPERFAMILY SSF52402 15 230 1.21E-62 T 14-10-2018 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 SUPERFAMILY SSF82829 232 317 7.98E-24 T 14-10-2018 VAB027_2884 e560aad0a90fdca04971a3cd0dbd8c0c 440 Pfam PF11734 TilS substrate C-terminal domain 364 430 5.2E-21 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAB027_2970 625ecbe5ec915fcd705f6d3e1d766c98 380 PIRSF PIRSF004810 1 380 2.7E-113 T 14-10-2018 IPR014047 Chromate transporter, long chain VAB027_2970 625ecbe5ec915fcd705f6d3e1d766c98 380 Pfam PF02417 Chromate transporter 3 168 3.5E-33 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VAB027_2970 625ecbe5ec915fcd705f6d3e1d766c98 380 Pfam PF02417 Chromate transporter 211 373 2.0E-33 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VAB027_2970 625ecbe5ec915fcd705f6d3e1d766c98 380 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 374 2.3E-89 T 14-10-2018 IPR014047 Chromate transporter, long chain VAB027_143 c842a38eed78ca34bc1b88d6454c6907 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.396 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VAB027_143 c842a38eed78ca34bc1b88d6454c6907 334 SUPERFAMILY SSF51556 4 327 5.73E-76 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_143 c842a38eed78ca34bc1b88d6454c6907 334 Pfam PF00962 Adenosine/AMP deaminase 6 327 1.8E-88 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VAB027_143 c842a38eed78ca34bc1b88d6454c6907 334 Gene3D G3DSA:3.20.20.140 1 333 2.2E-96 T 14-10-2018 VAB027_143 c842a38eed78ca34bc1b88d6454c6907 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 4.8E-126 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 Gene3D G3DSA:3.40.190.10 175 273 1.8E-55 T 14-10-2018 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 Gene3D G3DSA:3.40.190.10 94 298 1.8E-55 T 14-10-2018 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 Pfam PF03466 LysR substrate binding domain 100 299 3.0E-19 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 SUPERFAMILY SSF46785 8 88 3.83E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 Gene3D G3DSA:1.10.10.10 4 93 8.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 SUPERFAMILY SSF53850 94 301 5.79E-42 T 14-10-2018 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 7.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 7.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 7.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2203 b28c4c67f536756f1749cb0f3e55330d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1627 3b75f4d39ec017974c71788c8858ed15 174 Pfam PF10531 SLBB domain 101 142 1.1E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_1627 3b75f4d39ec017974c71788c8858ed15 174 Pfam PF02563 Polysaccharide biosynthesis/export protein 21 95 3.0E-21 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VAB027_1627 3b75f4d39ec017974c71788c8858ed15 174 Gene3D G3DSA:3.30.1950.10 28 99 9.6E-24 T 14-10-2018 VAB027_1627 3b75f4d39ec017974c71788c8858ed15 174 Gene3D G3DSA:3.10.560.10 22 170 9.6E-24 T 14-10-2018 VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 Gene3D G3DSA:1.10.275.10 2 197 6.2E-72 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.641 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 Pfam PF00221 Aromatic amino acid lyase 11 471 1.9E-191 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 Gene3D G3DSA:1.20.200.10 198 509 1.1E-127 T 14-10-2018 VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 498 9.7E-216 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1881 412809b541c335555cc8b8a0a3c22be8 511 SUPERFAMILY SSF48557 4 502 7.85E-197 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 SUPERFAMILY SSF55048 128 197 2.09E-17 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 Gene3D G3DSA:3.40.366.10 5 286 2.3E-110 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 Pfam PF00698 Acyl transferase domain 7 300 3.7E-36 T 14-10-2018 IPR014043 Acyl transferase VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 PIRSF PIRSF000446 1 307 5.3E-135 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 SUPERFAMILY SSF52151 4 305 1.91E-82 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 6.2E-127 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 1.1E-42 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VAB027_2659 4f56687504b7f9430ca70a5463ea79fc 307 Gene3D G3DSA:3.30.70.250 125 197 2.3E-110 T 14-10-2018 VAB027_1085 0abb12f05015e97bc167f1db87266d5e 284 SMART SM00849 37 219 9.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_1085 0abb12f05015e97bc167f1db87266d5e 284 Gene3D G3DSA:3.60.15.10 23 252 3.9E-24 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_1085 0abb12f05015e97bc167f1db87266d5e 284 Pfam PF00753 Metallo-beta-lactamase superfamily 34 151 5.3E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_1085 0abb12f05015e97bc167f1db87266d5e 284 SUPERFAMILY SSF56281 23 243 5.22E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 294 1.9E-126 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 SUPERFAMILY SSF53686 5 290 4.98E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 Gene3D G3DSA:3.40.50.1100 37 142 1.1E-112 T 14-10-2018 VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 294 2.6E-150 T 14-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 Gene3D G3DSA:3.40.50.1100 11 290 1.1E-112 T 14-10-2018 VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VAB027_3312 aa1090cba7f8411f10c5dc4f14629903 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 1.3E-65 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_25 29fa9ee52409e22532b0605727103952 474 SUPERFAMILY SSF54862 108 351 3.35E-31 T 14-10-2018 VAB027_25 29fa9ee52409e22532b0605727103952 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 1.4E-28 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VAB027_25 29fa9ee52409e22532b0605727103952 474 Gene3D G3DSA:2.60.40.10 358 474 1.3E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_25 29fa9ee52409e22532b0605727103952 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 1.1E-40 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_25 29fa9ee52409e22532b0605727103952 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_25 29fa9ee52409e22532b0605727103952 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 1.5E-175 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VAB027_25 29fa9ee52409e22532b0605727103952 474 Pfam PF12801 4Fe-4S binding domain 98 137 4.3E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 218 5.4E-91 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PIRSF PIRSF002764 1 222 3.7E-83 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 Pfam PF03379 CcmB protein 6 219 5.4E-89 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 2.0E-69 T 14-10-2018 VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 2.0E-69 T 14-10-2018 VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 2.0E-69 T 14-10-2018 VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 2.0E-69 T 14-10-2018 VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 2.0E-69 T 14-10-2018 VAB027_2694 39c0c6706aa6e7b2acb6efd8153702d5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 2.0E-69 T 14-10-2018 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 SUPERFAMILY SSF52833 3 107 3.93E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 Gene3D G3DSA:3.40.30.10 1 108 2.2E-35 T 14-10-2018 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 Pfam PF00085 Thioredoxin 5 106 1.4E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 PIRSF PIRSF000077 2 108 1.4E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 VAB027_3541 614816fbd4420c03f53a5993dc78116f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 Gene3D G3DSA:3.40.50.20 1 85 1.5E-34 T 14-10-2018 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 SUPERFAMILY SSF56059 83 346 8.25E-70 T 14-10-2018 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 Gene3D G3DSA:3.30.1490.20 131 203 6.0E-157 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 5.4E-244 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.5E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.8E-86 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 Gene3D G3DSA:3.30.470.20 86 433 6.0E-157 T 14-10-2018 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.5E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 SUPERFAMILY SSF52440 1 113 3.81E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_3551 623f5eb4a6872298041951231b0266a1 447 SUPERFAMILY SSF51246 331 444 6.28E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3551 623f5eb4a6872298041951231b0266a1 447 SMART SM00878 336 441 6.8E-66 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 Pfam PF03466 LysR substrate binding domain 118 308 1.8E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 108 307 7.0E-39 T 14-10-2018 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 187 283 7.0E-39 T 14-10-2018 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 SUPERFAMILY SSF53850 106 309 1.18E-36 T 14-10-2018 VAB027_3109 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_371 ba1ac8ce43bde9c6c2b05a0064bbaf16 501 Pfam PF04389 Peptidase family M28 181 378 4.0E-39 T 14-10-2018 IPR007484 Peptidase M28 VAB027_371 ba1ac8ce43bde9c6c2b05a0064bbaf16 501 Gene3D G3DSA:3.40.630.10 105 398 4.5E-90 T 14-10-2018 VAB027_371 ba1ac8ce43bde9c6c2b05a0064bbaf16 501 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 421 485 1.8E-11 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VAB027_371 ba1ac8ce43bde9c6c2b05a0064bbaf16 501 SUPERFAMILY SSF53187 106 392 8.75E-69 T 14-10-2018 VAB027_371 ba1ac8ce43bde9c6c2b05a0064bbaf16 501 Gene3D G3DSA:2.60.120.380 400 499 1.4E-33 T 14-10-2018 VAB027_371 ba1ac8ce43bde9c6c2b05a0064bbaf16 501 PIRSF PIRSF036685 1 501 4.4E-284 T 14-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 VAB027_3762 40b8d979197047467d803b8c2f64867f 107 SUPERFAMILY SSF54211 1 103 3.79E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3762 40b8d979197047467d803b8c2f64867f 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.611 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAB027_3762 40b8d979197047467d803b8c2f64867f 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 8.6E-25 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAB027_3762 40b8d979197047467d803b8c2f64867f 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 94 4.0E-47 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAB027_3762 40b8d979197047467d803b8c2f64867f 107 Pfam PF00825 Ribonuclease P 1 101 7.9E-30 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAB027_3762 40b8d979197047467d803b8c2f64867f 107 Gene3D G3DSA:3.30.230.10 1 107 1.7E-36 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.235 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 7.7E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.0E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 Gene3D G3DSA:3.40.50.11060 18 138 2.3E-37 T 14-10-2018 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 Gene3D G3DSA:3.40.50.300 197 371 4.4E-43 T 14-10-2018 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 SUPERFAMILY SSF54980 365 428 8.63E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.0E-156 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 PIRSF PIRSF006809 3 422 6.8E-150 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 SUPERFAMILY SSF52540 197 370 1.03E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3484 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SMART SM00448 4 115 4.7E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:1.10.10.60 414 474 2.1E-9 T 14-10-2018 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SMART SM00382 149 293 2.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Pfam PF00158 Sigma-54 interaction domain 135 295 2.0E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SUPERFAMILY SSF46689 342 468 1.7E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 6.2E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SUPERFAMILY SSF52172 3 173 2.13E-39 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:3.40.50.2300 1 119 4.2E-33 T 14-10-2018 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:1.10.8.60 301 379 1.0E-32 T 14-10-2018 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 SUPERFAMILY SSF52540 139 370 8.15E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2767 9b5f74c75e8ad0105089df6aaa2ab0c9 477 Gene3D G3DSA:3.40.50.300 120 300 5.9E-65 T 14-10-2018 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 1.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Gene3D G3DSA:3.30.450.20 86 200 1.2E-10 T 14-10-2018 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 SMART SM00091 98 166 2.0E-5 T 14-10-2018 IPR000014 PAS domain VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 8.2E-137 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Gene3D G3DSA:1.10.287.130 201 275 9.6E-21 T 14-10-2018 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 SMART SM00387 317 429 2.3E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.1E-31 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Gene3D G3DSA:3.30.565.10 279 430 2.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 SUPERFAMILY SSF55874 261 427 5.63E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.0E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 1.3E-5 T 14-10-2018 IPR000014 PAS domain VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 SUPERFAMILY SSF55785 86 197 3.49E-11 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 SMART SM00388 205 272 3.6E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 SUPERFAMILY SSF47384 192 272 1.16E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1381 a263dce9ab65de78568b84be8824ce53 433 Pfam PF00989 PAS fold 99 153 1.4E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 SMART SM00322 60 125 1.8E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF07650 KH domain 38 111 1.4E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54814 2 106 1.15E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.300.20 17 107 1.5E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.8E-99 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.055 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.1140.32 108 208 3.3E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.0E-42 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1279 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2005 e7b1c2604e711479f0a45cbd3cb00169 368 Gene3D G3DSA:2.40.50.100 57 247 1.6E-40 T 14-10-2018 VAB027_2005 e7b1c2604e711479f0a45cbd3cb00169 368 Gene3D G3DSA:2.40.30.170 248 290 1.6E-40 T 14-10-2018 VAB027_2005 e7b1c2604e711479f0a45cbd3cb00169 368 SUPERFAMILY SSF111369 56 276 1.28E-15 T 14-10-2018 VAB027_2005 e7b1c2604e711479f0a45cbd3cb00169 368 Pfam PF00529 HlyD membrane-fusion protein of T1SS 287 342 3.7E-6 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_2005 e7b1c2604e711479f0a45cbd3cb00169 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 6.1E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_2005 e7b1c2604e711479f0a45cbd3cb00169 368 Gene3D G3DSA:1.10.287.470 90 212 1.6E-40 T 14-10-2018 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR01900 YidC translocation/secretion protein signature 466 481 7.1E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR01900 YidC translocation/secretion protein signature 486 510 7.1E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR01900 YidC translocation/secretion protein signature 337 353 7.1E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 350 1.7E-112 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 533 26.094 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 Pfam PF02096 60Kd inner membrane protein 352 531 5.3E-64 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 Pfam PF14849 YidC periplasmic domain 66 341 3.6E-83 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 Gene3D G3DSA:2.70.98.90 62 331 1.6E-88 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 351 530 6.0E-74 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 162 182 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 413 436 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 250 265 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 497 520 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 215 233 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 322 342 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3761 9cd471f8ccfeda28a275c567aa15346e 541 PRINTS PR00701 60kDa inner membrane protein signature 460 482 2.4E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAB027_3629 34a837f8e32b10e721116919a631f766 269 SUPERFAMILY SSF57716 217 268 4.28E-16 T 14-10-2018 VAB027_3629 34a837f8e32b10e721116919a631f766 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.012 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VAB027_3629 34a837f8e32b10e721116919a631f766 269 Gene3D G3DSA:1.10.8.50 131 269 8.6E-48 T 14-10-2018 VAB027_3629 34a837f8e32b10e721116919a631f766 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.3E-97 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VAB027_3629 34a837f8e32b10e721116919a631f766 269 Gene3D G3DSA:3.20.190.10 2 128 7.6E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal VAB027_3629 34a837f8e32b10e721116919a631f766 269 SUPERFAMILY SSF46946 130 222 1.16E-30 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VAB027_3629 34a837f8e32b10e721116919a631f766 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VAB027_3629 34a837f8e32b10e721116919a631f766 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.4E-28 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VAB027_3629 34a837f8e32b10e721116919a631f766 269 SMART SM00898 2 115 1.5E-51 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VAB027_3629 34a837f8e32b10e721116919a631f766 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 3.9E-30 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VAB027_3629 34a837f8e32b10e721116919a631f766 269 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 1.1E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VAB027_3629 34a837f8e32b10e721116919a631f766 269 SUPERFAMILY SSF81624 2 138 1.7E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal VAB027_3629 34a837f8e32b10e721116919a631f766 269 SMART SM01232 129 221 8.9E-47 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 PIRSF PIRSF006276 1 145 5.2E-20 T 14-10-2018 IPR006015 Universal stress protein A VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 Gene3D G3DSA:3.40.50.620 1 142 5.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 Pfam PF00582 Universal stress protein family 1 142 1.4E-34 T 14-10-2018 IPR006016 UspA VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 SUPERFAMILY SSF52402 2 143 5.58E-37 T 14-10-2018 VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 PRINTS PR01438 Universal stress protein signature 102 114 2.0E-11 T 14-10-2018 IPR006015 Universal stress protein A VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 PRINTS PR01438 Universal stress protein signature 2 20 2.0E-11 T 14-10-2018 IPR006015 Universal stress protein A VAB027_3403 ddc5f300e81f2cb999f2315df31db115 145 PRINTS PR01438 Universal stress protein signature 120 142 2.0E-11 T 14-10-2018 IPR006015 Universal stress protein A VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Pfam PF14492 Elongation Factor G, domain II 409 483 8.5E-34 T 14-10-2018 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.6E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SUPERFAMILY SSF50447 271 409 2.83E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Gene3D G3DSA:3.30.70.870 410 488 1.0E-32 T 14-10-2018 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Gene3D G3DSA:2.40.30.10 299 405 1.1E-45 T 14-10-2018 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SMART SM00838 605 693 1.1E-58 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.4E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Pfam PF00679 Elongation factor G C-terminus 605 692 2.0E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Gene3D G3DSA:3.40.50.300 1 298 6.2E-116 T 14-10-2018 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Gene3D G3DSA:3.30.230.10 489 693 2.5E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.8E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SUPERFAMILY SSF54211 484 604 1.8E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Gene3D G3DSA:3.30.70.240 609 680 2.5E-90 T 14-10-2018 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SMART SM00889 485 603 1.2E-73 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Pfam PF03764 Elongation factor G, domain IV 484 603 8.5E-48 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SUPERFAMILY SSF54980 407 485 3.24E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SUPERFAMILY SSF54980 608 695 4.08E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 SUPERFAMILY SSF52540 6 288 3.68E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3471 225ef7500ce685c8b66ef2cb65292a26 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.634 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 5 479 4.2E-157 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 41.411 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 SUPERFAMILY SSF53756 5 481 5.97E-117 T 14-10-2018 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 Gene3D G3DSA:3.40.50.2000 6 479 1.9E-158 T 14-10-2018 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 Gene3D G3DSA:3.40.50.2000 254 465 1.9E-158 T 14-10-2018 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 Pfam PF00534 Glycosyl transferases group 1 298 443 2.2E-14 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VAB027_2371 c6046288b4544c687b3be1c915adcc45 484 Pfam PF08323 Starch synthase catalytic domain 5 235 1.1E-68 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VAB027_1771 19cf8800d6f7186aa1186b5a004bcb06 270 Gene3D G3DSA:3.40.190.10 102 202 4.4E-40 T 14-10-2018 VAB027_1771 19cf8800d6f7186aa1186b5a004bcb06 270 SUPERFAMILY SSF53850 3 267 1.34E-33 T 14-10-2018 VAB027_1771 19cf8800d6f7186aa1186b5a004bcb06 270 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 253 3.0E-56 T 14-10-2018 VAB027_1771 19cf8800d6f7186aa1186b5a004bcb06 270 Gene3D G3DSA:3.40.190.10 23 234 4.4E-40 T 14-10-2018 VAB027_1391 2ccf45fbd88d85f8f117fe8750b6595e 201 PIRSF PIRSF000239 1 200 8.6E-59 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAB027_1391 2ccf45fbd88d85f8f117fe8750b6595e 201 SUPERFAMILY SSF52833 1 196 2.74E-66 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1391 2ccf45fbd88d85f8f117fe8750b6595e 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 9.0E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAB027_1391 2ccf45fbd88d85f8f117fe8750b6595e 201 Gene3D G3DSA:3.40.30.10 1 198 3.2E-71 T 14-10-2018 VAB027_1391 2ccf45fbd88d85f8f117fe8750b6595e 201 Pfam PF00578 AhpC/TSA family 4 139 1.9E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 SUPERFAMILY SSF55103 275 525 1.8E-56 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Gene3D G3DSA:1.10.1060.10 523 633 1.6E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Pfam PF13183 4Fe-4S dicluster domain 544 616 3.6E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Gene3D G3DSA:3.30.70.2740 398 481 2.8E-8 T 14-10-2018 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 SUPERFAMILY SSF46548 499 628 1.71E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Pfam PF02913 FAD linked oxidases, C-terminal domain 272 520 5.7E-63 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Gene3D G3DSA:1.10.45.10 483 522 3.8E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Pfam PF01565 FAD binding domain 47 183 8.5E-29 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VAB027_1143 443a09730f897267b5e9aba2784f857e 959 Pfam PF02754 Cysteine-rich domain 714 801 0.0023 T 14-10-2018 IPR004017 Cysteine-rich domain VAB027_1143 443a09730f897267b5e9aba2784f857e 959 SUPERFAMILY SSF56176 11 268 2.33E-56 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_2949 61abdc0143a34808170494eb79131e83 368 SMART SM00925 120 253 6.8E-68 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VAB027_2949 61abdc0143a34808170494eb79131e83 368 Gene3D G3DSA:2.40.40.10 52 349 6.8E-142 T 14-10-2018 IPR036908 RlpA-like domain superfamily VAB027_2949 61abdc0143a34808170494eb79131e83 368 Pfam PF03562 MltA specific insert domain 99 253 1.8E-36 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VAB027_2949 61abdc0143a34808170494eb79131e83 368 Gene3D G3DSA:2.40.240.50 120 258 6.8E-142 T 14-10-2018 VAB027_2949 61abdc0143a34808170494eb79131e83 368 Pfam PF06725 3D domain 273 349 3.5E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VAB027_2949 61abdc0143a34808170494eb79131e83 368 SUPERFAMILY SSF50685 25 351 1.53E-102 T 14-10-2018 IPR036908 RlpA-like domain superfamily VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Pfam PF01434 Peptidase family M41 383 592 4.7E-81 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 6.6E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Gene3D G3DSA:3.40.50.300 137 323 3.2E-70 T 14-10-2018 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 5.4E-243 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Gene3D G3DSA:1.10.8.60 324 397 1.1E-27 T 14-10-2018 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Pfam PF06480 FtsH Extracellular 5 94 1.1E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 SMART SM00382 185 324 3.6E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Gene3D G3DSA:1.20.58.760 398 601 9.4E-72 T 14-10-2018 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 629 37.239 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 SUPERFAMILY SSF140990 403 601 1.23E-75 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VAB027_3212 f256341bc6181cca6e37339ca514be10 648 SUPERFAMILY SSF52540 145 392 5.12E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3212 f256341bc6181cca6e37339ca514be10 648 Gene3D G3DSA:2.40.50.920 24 100 7.9E-31 T 14-10-2018 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 Gene3D G3DSA:2.40.500.20 83 194 6.5E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.0E-37 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.4E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 Gene3D G3DSA:1.10.287.990 20 82 1.3E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 SUPERFAMILY SSF46609 1 84 2.09E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 SUPERFAMILY SSF54719 84 193 9.3E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_2683 d94fc1846c66c955093a404a32c4f510 194 PIRSF PIRSF000349 1 194 1.9E-83 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_968 c7420a4c1b4fe961e193a15d6f3e9487 265 SMART SM00422 8 77 8.7E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_968 c7420a4c1b4fe961e193a15d6f3e9487 265 SUPERFAMILY SSF46955 8 101 3.2E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_968 c7420a4c1b4fe961e193a15d6f3e9487 265 Gene3D G3DSA:1.10.1660.10 2 75 1.2E-24 T 14-10-2018 VAB027_968 c7420a4c1b4fe961e193a15d6f3e9487 265 Pfam PF13411 MerR HTH family regulatory protein 8 76 2.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_2148 3f64705e6314ffe11b6e41babf47c470 879 Pfam PF02470 MlaD protein 285 375 2.1E-8 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2148 3f64705e6314ffe11b6e41babf47c470 879 Pfam PF02470 MlaD protein 47 138 3.5E-12 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2148 3f64705e6314ffe11b6e41babf47c470 879 Pfam PF02470 MlaD protein 641 707 1.8E-6 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2148 3f64705e6314ffe11b6e41babf47c470 879 Pfam PF02470 MlaD protein 399 460 1.2E-9 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2148 3f64705e6314ffe11b6e41babf47c470 879 Pfam PF02470 MlaD protein 748 817 2.0E-7 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2148 3f64705e6314ffe11b6e41babf47c470 879 Pfam PF02470 MlaD protein 164 224 1.1E-7 T 14-10-2018 IPR003399 Mce/MlaD VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 86 7.6E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 209 7.3E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 SUPERFAMILY SSF52794 2 101 1.27E-28 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 SUPERFAMILY SSF52794 123 223 2.96E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 3.0E-37 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 Pfam PF02378 Phosphotransferase system, EIIC 249 512 6.2E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 Gene3D G3DSA:3.40.50.2300 114 223 3.3E-40 T 14-10-2018 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 Gene3D G3DSA:3.40.50.2300 1 103 1.9E-24 T 14-10-2018 VAB027_643 a6d73731501f2d004096ad56fbdd7686 578 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 229 568 8.5E-143 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VAB027_469 8850430152697db64fd33a0984bc0d16 486 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 2.4E-126 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 1.1E-148 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 SUPERFAMILY SSF52935 350 477 1.47E-21 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 Gene3D G3DSA:2.40.33.10 70 170 5.4E-142 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 SUPERFAMILY SSF50800 71 168 1.36E-23 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAB027_469 8850430152697db64fd33a0984bc0d16 486 Gene3D G3DSA:3.20.20.60 3 339 5.4E-142 T 14-10-2018 VAB027_469 8850430152697db64fd33a0984bc0d16 486 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 474 6.6E-9 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 Gene3D G3DSA:3.40.1380.20 340 473 5.4E-142 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 SUPERFAMILY SSF51621 3 347 4.71E-88 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 188 202 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 298 316 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 221 247 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 317 333 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 273 297 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_469 8850430152697db64fd33a0984bc0d16 486 PRINTS PR01050 Pyruvate kinase family signature 248 272 7.8E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01021 OMPA domain signature 148 163 3.1E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01021 OMPA domain signature 163 179 3.1E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 Pfam PF00691 OmpA family 118 212 1.1E-20 T 14-10-2018 IPR006665 OmpA-like domain VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 Pfam PF13488 Glycine zipper 38 86 3.2E-12 T 14-10-2018 IPR039567 Glycine zipper domain VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 Gene3D G3DSA:3.30.1330.60 80 222 6.8E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 SUPERFAMILY SSF103088 106 221 1.83E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 2.7E-5 T 14-10-2018 VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 2.7E-5 T 14-10-2018 VAB027_1873 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 2.7E-5 T 14-10-2018 VAB027_2633 7a53f1d02adb8ac390dbab739e6fc5be 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 131 3.6E-54 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_2633 7a53f1d02adb8ac390dbab739e6fc5be 134 Gene3D G3DSA:2.170.150.20 2 134 4.4E-58 T 14-10-2018 VAB027_2633 7a53f1d02adb8ac390dbab739e6fc5be 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 35.906 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_2633 7a53f1d02adb8ac390dbab739e6fc5be 134 SUPERFAMILY SSF51316 9 133 3.19E-55 T 14-10-2018 IPR011057 Mss4-like superfamily VAB027_2633 7a53f1d02adb8ac390dbab739e6fc5be 134 Pfam PF01641 SelR domain 15 132 1.0E-51 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 Gene3D G3DSA:3.10.580.10 129 256 1.0E-21 T 14-10-2018 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 SUPERFAMILY SSF161093 275 446 1.03E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 Pfam PF01769 Divalent cation transporter 318 439 2.8E-25 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 SUPERFAMILY SSF54631 133 270 2.44E-19 T 14-10-2018 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 SUPERFAMILY SSF158791 20 128 9.42E-5 T 14-10-2018 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 50 446 5.6E-70 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 Pfam PF00571 CBS domain 198 248 0.0027 T 14-10-2018 IPR000644 CBS domain VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 Gene3D G3DSA:1.10.357.20 269 446 1.1E-52 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAB027_2301 1577e352c5a93504ef45e86dd18eda77 450 SMART SM00116 204 251 7.4E-4 T 14-10-2018 IPR000644 CBS domain VAB027_2876 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Pfam PF00075 RNase H 3 142 7.3E-54 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VAB027_2876 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Gene3D G3DSA:3.30.420.10 1 155 3.8E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_2876 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 SUPERFAMILY SSF53098 3 143 4.43E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2876 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.25 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 VAB027_338 00f0525737fcad15929568e113cf314b 261 Pfam PF00072 Response regulator receiver domain 10 115 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_338 00f0525737fcad15929568e113cf314b 261 SMART SM00448 6 118 4.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_338 00f0525737fcad15929568e113cf314b 261 SMART SM00850 163 261 1.7E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VAB027_338 00f0525737fcad15929568e113cf314b 261 SUPERFAMILY SSF52172 6 172 6.55E-33 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_338 00f0525737fcad15929568e113cf314b 261 Gene3D G3DSA:2.40.50.40 156 226 8.6E-10 T 14-10-2018 VAB027_338 00f0525737fcad15929568e113cf314b 261 Pfam PF04397 LytTr DNA-binding domain 164 259 2.6E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VAB027_338 00f0525737fcad15929568e113cf314b 261 Gene3D G3DSA:3.40.50.2300 1 155 4.9E-34 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 SUPERFAMILY SSF50341 187 336 1.96E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Gene3D G3DSA:2.40.50.180 38 147 1.3E-28 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 SMART SM00260 188 334 4.4E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 SMART SM00260 15 152 1.0E-17 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 SMART SM00260 366 503 6.6E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Gene3D G3DSA:2.30.30.40 22 146 1.3E-28 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 SUPERFAMILY SSF50341 11 154 2.09E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Gene3D G3DSA:2.30.30.40 372 497 6.6E-38 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Gene3D G3DSA:2.40.50.180 389 456 6.6E-38 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Gene3D G3DSA:2.40.50.180 211 283 6.2E-26 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Gene3D G3DSA:2.30.30.40 197 321 6.2E-26 T 14-10-2018 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 SUPERFAMILY SSF50341 364 509 8.24E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Pfam PF01584 CheW-like domain 19 153 1.5E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Pfam PF01584 CheW-like domain 370 505 2.4E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2077 7df6b7c19fbf008a0ebb8dda594bf2b3 520 Pfam PF01584 CheW-like domain 192 335 4.7E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 Gene3D G3DSA:3.30.110.10 34 129 1.3E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 3.6E-14 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 Gene3D G3DSA:3.10.20.80 1 33 1.5E-14 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 1.8E-58 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 2.6E-36 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 SUPERFAMILY SSF54364 1 36 1.83E-13 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAB027_771 27c0c2e59c9ab54c4076173d1768e064 129 SUPERFAMILY SSF55200 41 129 7.98E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 430 3.0E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 SMART SM00387 320 431 1.9E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 SUPERFAMILY SSF55874 262 429 1.96E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 SUPERFAMILY SSF52172 450 569 4.13E-38 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 Pfam PF00072 Response regulator receiver domain 454 564 5.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 Gene3D G3DSA:3.30.565.10 272 434 4.8E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 SMART SM00388 209 273 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 7.0E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 7.0E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.0E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 7.0E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 Gene3D G3DSA:3.40.50.2300 435 567 4.9E-40 T 14-10-2018 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 SMART SM00448 452 564 3.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 Gene3D G3DSA:1.10.287.130 175 271 8.8E-24 T 14-10-2018 VAB027_2118 7b0fae7c378b829d3a5f55bd3346d2b3 570 SUPERFAMILY SSF47384 194 274 6.87E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2008 016c30933effb1c5fa74e5a591923fc8 265 SUPERFAMILY SSF54001 38 264 1.63E-73 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VAB027_2008 016c30933effb1c5fa74e5a591923fc8 265 Pfam PF07313 Protein of unknown function (DUF1460) 60 257 2.9E-75 T 14-10-2018 IPR010846 Protein of unknown function DUF1460 VAB027_2008 016c30933effb1c5fa74e5a591923fc8 265 Gene3D G3DSA:1.10.3670.10 50 173 6.1E-23 T 14-10-2018 VAB027_2008 016c30933effb1c5fa74e5a591923fc8 265 Gene3D G3DSA:2.30.260.10 174 265 2.1E-21 T 14-10-2018 VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 1.2E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 Gene3D G3DSA:1.25.40.10 16 320 3.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 Gene3D G3DSA:3.30.70.270 356 526 5.4E-42 T 14-10-2018 VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 SMART SM00267 358 526 2.1E-32 T 14-10-2018 IPR000160 GGDEF domain VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 SUPERFAMILY SSF55073 374 525 4.32E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 1.4E-32 T 14-10-2018 IPR000160 GGDEF domain VAB027_973 b7b0970e3f4c635e87e578be80f5a1be 526 SUPERFAMILY SSF48452 38 227 1.11E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 Gene3D G3DSA:3.80.30.20 145 377 3.5E-83 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 SMART SM00729 147 367 1.8E-64 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 SUPERFAMILY SSF102114 123 374 6.54E-62 T 14-10-2018 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.844 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 Pfam PF01938 TRAM domain 379 440 8.6E-18 T 14-10-2018 IPR002792 TRAM domain VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 Pfam PF04055 Radical SAM superfamily 151 325 1.4E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 5.9E-199 T 14-10-2018 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 Gene3D G3DSA:3.40.50.12160 3 138 1.5E-33 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.9E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VAB027_1651 d66508d15c7964b02ed7bf303c524461 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.9E-151 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VAB027_3571 a2885b1710a2de268bde99d639e2c1a5 229 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 8.6E-59 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 VAB027_3571 a2885b1710a2de268bde99d639e2c1a5 229 PIRSF PIRSF028160 1 229 2.6E-123 T 14-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VAB027_1492 9e107b1f76e3650d4b3af42ca9a5c41a 101 Pfam PF03658 RnfH family Ubiquitin 6 88 3.0E-34 T 14-10-2018 IPR005346 RnfH protein VAB027_1492 9e107b1f76e3650d4b3af42ca9a5c41a 101 Gene3D G3DSA:3.10.20.280 1 90 1.2E-33 T 14-10-2018 IPR037021 RnfH superfamily VAB027_1492 9e107b1f76e3650d4b3af42ca9a5c41a 101 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.351 T 14-10-2018 IPR005346 RnfH protein VAB027_1492 9e107b1f76e3650d4b3af42ca9a5c41a 101 SUPERFAMILY SSF54285 4 80 6.67E-26 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VAB027_2023 8acdb3dcd7ba9ffab34e4d587d5599d0 378 Pfam PF04209 homogentisate 1,2-dioxygenase 53 375 4.5E-24 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VAB027_2023 8acdb3dcd7ba9ffab34e4d587d5599d0 378 Gene3D G3DSA:2.60.120.10 70 168 2.0E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_2023 8acdb3dcd7ba9ffab34e4d587d5599d0 378 SUPERFAMILY SSF51182 57 376 6.99E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_2807 fdcd5f22576a87022e5de4c3c43cbfae 205 Gene3D G3DSA:2.50.20.10 26 203 9.7E-55 T 14-10-2018 VAB027_2807 fdcd5f22576a87022e5de4c3c43cbfae 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 202 7.4E-41 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VAB027_2807 fdcd5f22576a87022e5de4c3c43cbfae 205 SUPERFAMILY SSF89392 20 202 1.49E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VAB027_2807 fdcd5f22576a87022e5de4c3c43cbfae 205 Pfam PF03550 Outer membrane lipoprotein LolB 44 201 1.1E-46 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VAB027_2807 fdcd5f22576a87022e5de4c3c43cbfae 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 203 28.147 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 3.3E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 SUPERFAMILY SSF53901 1 251 3.74E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 Gene3D G3DSA:3.40.47.10 6 257 3.1E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.6E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.5E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 Gene3D G3DSA:3.40.47.10 258 401 5.0E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2743 8c18c029d6737378c9ef1eac743d628f 403 SUPERFAMILY SSF53901 213 401 2.67E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2068 86f1b939460bbe5302dcf0c9179d9ad5 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.8E-25 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VAB027_2068 86f1b939460bbe5302dcf0c9179d9ad5 104 Gene3D G3DSA:1.10.3730.20 1 104 1.0E-29 T 14-10-2018 VAB027_2068 86f1b939460bbe5302dcf0c9179d9ad5 104 SUPERFAMILY SSF103481 5 102 2.62E-18 T 14-10-2018 VAB027_2043 10e7ad46d1f98b1f0a518b44edee8d6c 231 PIRSF PIRSF006293 1 224 4.8E-83 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAB027_2043 10e7ad46d1f98b1f0a518b44edee8d6c 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.509 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAB027_2043 10e7ad46d1f98b1f0a518b44edee8d6c 231 SUPERFAMILY SSF52402 1 212 6.17E-69 T 14-10-2018 VAB027_2043 10e7ad46d1f98b1f0a518b44edee8d6c 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.0E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAB027_2043 10e7ad46d1f98b1f0a518b44edee8d6c 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.9E-84 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAB027_2043 10e7ad46d1f98b1f0a518b44edee8d6c 231 Gene3D G3DSA:3.40.50.620 1 230 6.6E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 333 1.0E-34 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 Gene3D G3DSA:1.20.272.10 213 338 3.0E-37 T 14-10-2018 VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.6E-50 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 2.5E-106 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 SUPERFAMILY SSF52540 1 208 1.73E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 Gene3D G3DSA:1.10.8.60 143 212 2.5E-19 T 14-10-2018 VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 SUPERFAMILY SSF48019 211 333 4.25E-29 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAB027_1643 7ec9453e4c2cf45d3eeef3df5b7e1fae 342 Gene3D G3DSA:3.40.50.300 1 139 2.4E-50 T 14-10-2018 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 SMART SM00091 195 263 2.5E-4 T 14-10-2018 IPR000014 PAS domain VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 519 3.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 SUPERFAMILY SSF55890 318 401 1.27E-8 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 SUPERFAMILY SSF103190 19 149 3.4E-34 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 Gene3D G3DSA:3.30.450.20 182 303 1.6E-16 T 14-10-2018 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 SMART SM00387 410 521 5.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 Gene3D G3DSA:3.30.565.10 355 519 3.0E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 SUPERFAMILY SSF55785 189 301 2.28E-8 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 313 361 7.3E-7 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 SUPERFAMILY SSF55874 389 518 7.07E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 Pfam PF17203 Single cache domain 3 20 149 1.2E-20 T 14-10-2018 IPR033463 Single cache domain 3 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1443 1ce29e2fed58e79ab57d89298b630ac2 536 Gene3D G3DSA:3.30.450.20 13 146 5.3E-40 T 14-10-2018 VAB027_3273 0e35b50f6fd164376810411c48719004 142 PIRSF PIRSF002181 1 142 1.8E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VAB027_3273 0e35b50f6fd164376810411c48719004 142 Pfam PF00572 Ribosomal protein L13 15 138 2.0E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VAB027_3273 0e35b50f6fd164376810411c48719004 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VAB027_3273 0e35b50f6fd164376810411c48719004 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.6E-65 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3273 0e35b50f6fd164376810411c48719004 142 SUPERFAMILY SSF52161 1 140 7.85E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_3273 0e35b50f6fd164376810411c48719004 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.831 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VAB027_3273 0e35b50f6fd164376810411c48719004 142 Gene3D G3DSA:3.90.1180.10 1 142 3.4E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_88 6126ded340848894eef630cc48940f3e 659 SUPERFAMILY SSF55785 193 300 8.1E-26 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_88 6126ded340848894eef630cc48940f3e 659 SMART SM00091 63 131 1.1 T 14-10-2018 IPR000014 PAS domain VAB027_88 6126ded340848894eef630cc48940f3e 659 SMART SM00091 184 252 0.017 T 14-10-2018 IPR000014 PAS domain VAB027_88 6126ded340848894eef630cc48940f3e 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 565 3.9E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_88 6126ded340848894eef630cc48940f3e 659 SMART SM00283 350 597 1.0E-82 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_88 6126ded340848894eef630cc48940f3e 659 Gene3D G3DSA:3.30.450.20 77 183 2.9E-14 T 14-10-2018 VAB027_88 6126ded340848894eef630cc48940f3e 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 475 4.1E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_88 6126ded340848894eef630cc48940f3e 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 554 4.1E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_88 6126ded340848894eef630cc48940f3e 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 400 4.1E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_88 6126ded340848894eef630cc48940f3e 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 4.1E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_88 6126ded340848894eef630cc48940f3e 659 Gene3D G3DSA:3.30.450.20 191 297 1.6E-20 T 14-10-2018 VAB027_88 6126ded340848894eef630cc48940f3e 659 Pfam PF08448 PAS fold 77 178 2.9E-12 T 14-10-2018 IPR013656 PAS fold-4 VAB027_88 6126ded340848894eef630cc48940f3e 659 Pfam PF08447 PAS fold 207 292 5.0E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VAB027_88 6126ded340848894eef630cc48940f3e 659 SUPERFAMILY SSF55785 77 175 5.86E-12 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_88 6126ded340848894eef630cc48940f3e 659 Gene3D G3DSA:1.10.287.950 300 599 7.4E-83 T 14-10-2018 VAB027_88 6126ded340848894eef630cc48940f3e 659 SMART SM00086 257 299 0.025 T 14-10-2018 IPR001610 PAC motif VAB027_88 6126ded340848894eef630cc48940f3e 659 SMART SM00086 136 177 32.0 T 14-10-2018 IPR001610 PAC motif VAB027_88 6126ded340848894eef630cc48940f3e 659 SUPERFAMILY SSF58104 317 598 4.05E-72 T 14-10-2018 VAB027_88 6126ded340848894eef630cc48940f3e 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 304 3.4E-15 T 14-10-2018 IPR000014 PAS domain VAB027_88 6126ded340848894eef630cc48940f3e 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 77 178 1.8E-7 T 14-10-2018 IPR000014 PAS domain VAB027_675 6bd3d491dcef227ccb022ec9f734f2da 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 7.5E-9 T 14-10-2018 VAB027_675 6bd3d491dcef227ccb022ec9f734f2da 84 Gene3D G3DSA:3.40.1620.10 1 40 1.7E-8 T 14-10-2018 VAB027_675 6bd3d491dcef227ccb022ec9f734f2da 84 SUPERFAMILY SSF143120 1 81 5.62E-25 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_675 6bd3d491dcef227ccb022ec9f734f2da 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 2.5E-23 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_675 6bd3d491dcef227ccb022ec9f734f2da 84 Gene3D G3DSA:1.10.1220.170 41 84 1.3E-14 T 14-10-2018 VAB027_1579 56b37ed02c6fccced3bfc5fe707df81a 100 ProDom PD283729 GP25 PHAGE SO2675 MEMBRANE MU-LIKE TRANSMEMBRANE HI1498 ECS4966 9 94 4.0E-4 T 14-10-2018 IPR020269 Bacteriophage Mu, Gp25 VAB027_1579 56b37ed02c6fccced3bfc5fe707df81a 100 Pfam PF10805 Protein of unknown function (DUF2730) 3 97 4.3E-25 T 14-10-2018 IPR020269 Bacteriophage Mu, Gp25 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 Pfam PF00800 Prephenate dehydratase 109 290 2.5E-58 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 Gene3D G3DSA:3.40.190.10 112 286 1.7E-53 T 14-10-2018 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 Gene3D G3DSA:3.40.190.10 192 277 1.7E-53 T 14-10-2018 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 SUPERFAMILY SSF55021 283 380 5.61E-27 T 14-10-2018 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 SUPERFAMILY SSF48600 7 95 1.83E-20 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 Gene3D G3DSA:1.20.59.10 2 111 2.8E-32 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 Pfam PF01817 Chorismate mutase type II 12 91 2.7E-18 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 Gene3D G3DSA:3.30.70.260 295 382 1.1E-25 T 14-10-2018 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 PIRSF PIRSF001500 1 383 4.1E-146 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 91 1.9E-27 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 SUPERFAMILY SSF53850 108 294 7.16E-55 T 14-10-2018 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 SMART SM00830 12 93 9.3E-24 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3129 47e9b88a459d2ec17e7579ec5fcec74e 391 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAB027_2890 e3ae7793c60ee341a9d75ff1484ea0c8 150 Gene3D G3DSA:3.10.129.10 3 150 2.4E-60 T 14-10-2018 VAB027_2890 e3ae7793c60ee341a9d75ff1484ea0c8 150 Pfam PF07977 FabA-like domain 17 141 3.3E-41 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2890 e3ae7793c60ee341a9d75ff1484ea0c8 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.67 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2890 e3ae7793c60ee341a9d75ff1484ea0c8 150 SUPERFAMILY SSF54637 7 146 2.11E-49 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_2890 e3ae7793c60ee341a9d75ff1484ea0c8 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 1.1E-58 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Gene3D G3DSA:1.10.1050.10 1 102 8.8E-45 T 14-10-2018 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 9.7E-85 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Gene3D G3DSA:3.10.290.10 103 191 3.9E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.307 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SMART SM01390 3 95 6.9E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.5E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SMART SM00363 96 160 9.7E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Pfam PF01479 S4 domain 97 143 4.9E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SUPERFAMILY SSF55174 3 206 3.01E-72 T 14-10-2018 VAB027_1297 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 7.2E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 7.2E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 7.2E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 7.2E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 7.2E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 7.2E-39 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 58 1.9E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 PIRSF PIRSF000410 1 276 7.9E-78 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 SMART SM00138 8 275 1.9E-75 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 264 2.9E-57 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 SUPERFAMILY SSF47757 2 75 2.22E-18 T 14-10-2018 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 Gene3D G3DSA:3.40.50.150 75 275 1.8E-57 T 14-10-2018 VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 Gene3D G3DSA:1.10.155.10 1 74 2.9E-17 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VAB027_2074 59633430f7ed4de37ab360f1f5f82ca6 281 SUPERFAMILY SSF53335 76 263 5.39E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 SUPERFAMILY SSF64518 1 376 1.7E-96 T 14-10-2018 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.20.1330.10 45 172 8.3E-73 T 14-10-2018 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.10.8.410 329 376 5.1E-20 T 14-10-2018 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.20.1330.10 190 328 1.6E-18 T 14-10-2018 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 6.9E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Gene3D G3DSA:1.20.58.1830 5 33 8.3E-73 T 14-10-2018 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Pfam PF07196 Flagellin hook IN motif 194 249 2.9E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.4E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2775 3ffece2b3d87711ca51db396555cb089 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_644 29a080d10ff168ab91f50ffd483cdd50 227 Gene3D G3DSA:2.40.70.10 85 212 3.6E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VAB027_644 29a080d10ff168ab91f50ffd483cdd50 227 Pfam PF05618 Putative ATP-dependant zinc protease 88 222 1.4E-48 T 14-10-2018 VAB027_644 29a080d10ff168ab91f50ffd483cdd50 227 SUPERFAMILY SSF50630 88 219 5.31E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 Gene3D G3DSA:1.10.287.80 6 284 2.3E-109 T 14-10-2018 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 Gene3D G3DSA:3.40.1380.10 61 207 2.3E-109 T 14-10-2018 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.7E-110 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.479 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 Pfam PF00231 ATP synthase 5 287 9.5E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3719 0071a6fcf486cec4844850186fe0927f 288 SUPERFAMILY SSF52943 2 288 5.0E-95 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 Gene3D G3DSA:2.60.40.10 839 918 7.8E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 Gene3D G3DSA:2.60.40.10 753 838 3.2E-36 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 Pfam PF05547 Immune inhibitor A peptidase M6 105 747 0.0 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 SUPERFAMILY SSF49299 756 837 9.94E-22 T 14-10-2018 IPR035986 PKD domain superfamily VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 Pfam PF00801 PKD domain 772 827 7.6E-13 T 14-10-2018 IPR000601 PKD domain VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 Pfam PF00801 PKD domain 843 911 2.3E-10 T 14-10-2018 IPR000601 PKD domain VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 SMART SM00089 841 917 1.8E-14 T 14-10-2018 IPR022409 PKD/Chitinase domain VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 SMART SM00089 760 838 1.3E-24 T 14-10-2018 IPR022409 PKD/Chitinase domain VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 PIRSF PIRSF007519 1 767 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 SUPERFAMILY SSF49299 838 916 1.02E-10 T 14-10-2018 IPR035986 PKD domain superfamily VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 SUPERFAMILY SSF55486 212 385 1.18E-19 T 14-10-2018 VAB027_822 6c54098a7ffb3dcf73dca7d7b509d143 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 121 442 1.5E-85 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VAB027_2344 f2c1afd5c5fc7f74f678a638ebd9b041 215 Gene3D G3DSA:3.40.50.620 17 153 3.8E-29 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2344 f2c1afd5c5fc7f74f678a638ebd9b041 215 Pfam PF02698 DUF218 domain 26 147 7.7E-25 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VAB027_3402 727e750b772b11e5a1acb9f9237d9754 854 Pfam PF11874 Domain of unknown function (DUF3394) 673 852 2.5E-69 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 VAB027_3402 727e750b772b11e5a1acb9f9237d9754 854 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 666 1.0E-77 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAB027_3402 727e750b772b11e5a1acb9f9237d9754 854 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 724 1.4E-211 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VAB027_667 3fabc5203df26d335aba83bd830e0510 195 Gene3D G3DSA:3.30.460.10 3 131 1.3E-12 T 14-10-2018 VAB027_667 3fabc5203df26d335aba83bd830e0510 195 SUPERFAMILY SSF81301 5 121 8.18E-7 T 14-10-2018 VAB027_667 3fabc5203df26d335aba83bd830e0510 195 Pfam PF01909 Nucleotidyltransferase domain 9 72 1.0E-4 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VAB027_3414 b8bf5b598afac5e58cf178fb6cd78700 296 Gene3D G3DSA:2.40.10.350 180 257 5.3E-35 T 14-10-2018 VAB027_3414 b8bf5b598afac5e58cf178fb6cd78700 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 1.6E-83 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VAB027_3414 b8bf5b598afac5e58cf178fb6cd78700 296 Pfam PF04085 rod shape-determining protein MreC 123 269 3.1E-39 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VAB027_3414 b8bf5b598afac5e58cf178fb6cd78700 296 Gene3D G3DSA:2.40.10.340 122 266 5.3E-35 T 14-10-2018 VAB027_3414 b8bf5b598afac5e58cf178fb6cd78700 296 PIRSF PIRSF038471 2 283 5.6E-79 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 SUPERFAMILY SSF49899 26 215 1.58E-72 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 SUPERFAMILY SSF50939 224 775 1.51E-66 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 Gene3D G3DSA:2.60.120.200 354 540 1.2E-281 T 14-10-2018 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 Gene3D G3DSA:2.60.120.200 25 213 2.9E-82 T 14-10-2018 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 Gene3D G3DSA:2.120.10.10 224 769 1.2E-281 T 14-10-2018 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 Pfam PF09264 Vibrio cholerae sialidase, lectin insertion 86 216 6.0E-6 T 14-10-2018 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain GO:0033691 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 Pfam PF09264 Vibrio cholerae sialidase, lectin insertion 347 543 2.2E-126 T 14-10-2018 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain GO:0033691 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 SUPERFAMILY SSF49899 347 542 3.96E-65 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_2456 026d3352f2e57e3e74c1cdb4a01de63f 781 Pfam PF13088 BNR repeat-like domain 557 747 3.0E-14 T 14-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 Gene3D G3DSA:3.40.50.300 1 212 6.3E-73 T 14-10-2018 VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 SMART SM00490 260 341 3.7E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 SMART SM00487 20 223 7.8E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 Gene3D G3DSA:3.40.50.300 214 423 6.4E-51 T 14-10-2018 VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 SUPERFAMILY SSF52540 73 360 1.55E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.0E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_963 d3067b2b91c0edd4d3091a7431c3ae7f 448 Pfam PF00271 Helicase conserved C-terminal domain 237 341 4.8E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_758 b46674a7fad19bb4ed97b13efbf24c6d 199 Pfam PF13505 Outer membrane protein beta-barrel domain 20 181 4.2E-14 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_758 b46674a7fad19bb4ed97b13efbf24c6d 199 SUPERFAMILY SSF56925 32 199 4.97E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_758 b46674a7fad19bb4ed97b13efbf24c6d 199 Gene3D G3DSA:2.40.160.20 29 199 2.4E-10 T 14-10-2018 VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 SUPERFAMILY SSF51905 266 659 2.91E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 659 28.224 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 664 1.6E-156 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 Gene3D G3DSA:3.50.50.60 265 661 1.5E-136 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.8E-47 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 Gene3D G3DSA:3.40.50.150 7 251 1.3E-106 T 14-10-2018 VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 Pfam PF01266 FAD dependent oxidoreductase 266 634 1.6E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAB027_2744 358f37c066abdfa91cad1033262ff2c6 671 Gene3D G3DSA:3.30.9.10 349 573 1.5E-136 T 14-10-2018 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 4 237 1.3E-44 T 14-10-2018 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 1 239 1.4E-103 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 SUPERFAMILY SSF51735 3 238 5.63E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 122 150 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 Gene3D G3DSA:3.40.50.720 1 239 1.5E-55 T 14-10-2018 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 85 105 3.2E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 190 209 3.2E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 65 82 3.2E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 216 235 3.2E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAB027_1430 93fe27f5f3273cc7d972d4edd54b0cd6 240 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 150 173 3.2E-56 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.274 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 PIRSF PIRSF015589 1 696 4.6E-254 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.5E-145 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Gene3D G3DSA:1.20.58.310 9 109 3.0E-36 T 14-10-2018 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 SUPERFAMILY SSF140356 4 104 3.01E-33 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.4E-265 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Gene3D G3DSA:3.30.1840.10 110 307 6.1E-75 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 SUPERFAMILY SSF56024 315 493 1.07E-54 T 14-10-2018 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Gene3D G3DSA:3.30.870.10 319 499 5.5E-72 T 14-10-2018 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 7.3E-31 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Pfam PF02503 Polyphosphate kinase middle domain 119 320 8.7E-47 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 SUPERFAMILY SSF143724 107 313 3.14E-64 T 14-10-2018 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 SUPERFAMILY SSF56024 500 684 5.61E-68 T 14-10-2018 VAB027_1384 94df564b39e7287b24532b9f1238c6d3 701 Gene3D G3DSA:3.30.870.10 500 686 9.9E-73 T 14-10-2018 VAB027_1676 3e44255a0e7bfdd8f0502360388ad99f 121 SUPERFAMILY SSF82679 2 56 7.32E-12 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_1676 3e44255a0e7bfdd8f0502360388ad99f 121 SMART SM00739 68 95 0.0065 T 14-10-2018 IPR005824 KOW VAB027_1676 3e44255a0e7bfdd8f0502360388ad99f 121 Gene3D G3DSA:3.30.70.940 1 120 2.9E-30 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_1676 3e44255a0e7bfdd8f0502360388ad99f 121 Pfam PF02357 Transcription termination factor nusG 5 48 1.1E-5 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_1676 3e44255a0e7bfdd8f0502360388ad99f 121 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 1 119 9.8E-50 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 Gene3D G3DSA:1.10.3860.10 21 456 8.1E-101 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 SUPERFAMILY SSF118215 29 441 8.24E-92 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 2.8E-28 T 14-10-2018 VAB027_1914 f0d3f8fb4a6a81fa66b47ef702497c23 457 Pfam PF00375 Sodium:dicarboxylate symporter family 30 441 2.7E-100 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 Gene3D G3DSA:3.40.50.720 1 162 5.9E-51 T 14-10-2018 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 SUPERFAMILY SSF48179 164 289 3.17E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 SUPERFAMILY SSF51735 1 163 2.25E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 3.1E-49 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 PIRSF PIRSF000103 1 291 8.7E-71 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 Gene3D G3DSA:1.10.1040.10 163 291 3.6E-33 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAB027_1013 b0d72762cdb86d7fc7fa8c55c5dfaa78 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.3E-28 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.1E-25 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 Gene3D G3DSA:3.30.70.360 177 292 4.0E-78 T 14-10-2018 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 3.6E-123 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.75 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 SUPERFAMILY SSF55031 177 290 2.69E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 Gene3D G3DSA:3.40.630.10 25 360 4.0E-78 T 14-10-2018 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 SUPERFAMILY SSF53187 4 377 1.69E-53 T 14-10-2018 VAB027_246 a697e35bc67d533978ff8dc366531fb3 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.7E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Gene3D G3DSA:2.40.50.140 1 65 3.5E-26 T 14-10-2018 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.4E-14 T 14-10-2018 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 SUPERFAMILY SSF46929 159 203 2.49E-12 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 SMART SM00278 73 92 160.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 SMART SM00278 108 127 0.046 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.453 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Pfam PF01330 RuvA N terminal domain 2 62 8.2E-20 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.7E-62 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 SUPERFAMILY SSF47781 66 136 1.45E-20 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 SUPERFAMILY SSF50249 2 63 4.68E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Gene3D G3DSA:1.10.150.20 67 143 8.9E-26 T 14-10-2018 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Pfam PF07499 RuvA, C-terminal domain 160 203 4.4E-17 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VAB027_2489 81f1ab97a0b3c94d074b868617b16f10 204 Gene3D G3DSA:1.10.8.10 157 204 6.5E-22 T 14-10-2018 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 SUPERFAMILY SSF56672 3 238 2.31E-90 T 14-10-2018 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.308 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 340 4.5E-4 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Pfam PF00817 impB/mucB/samB family 11 158 2.1E-49 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Gene3D G3DSA:3.30.1490.100 241 354 5.6E-25 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Gene3D G3DSA:1.10.150.20 170 232 1.9E-13 T 14-10-2018 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Gene3D G3DSA:2.30.40.20 25 77 5.8E-65 T 14-10-2018 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Gene3D G3DSA:3.30.70.270 8 168 5.8E-65 T 14-10-2018 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 SUPERFAMILY SSF100879 245 353 3.14E-23 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAB027_2926 b6f2a808a7b4b8371b9b539c5faddd07 360 Pfam PF11798 IMS family HHH motif 170 201 3.3E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VAB027_168 80d491942ab12077f914ad3a45953f02 403 Gene3D G3DSA:3.30.420.370 142 216 4.9E-92 T 14-10-2018 VAB027_168 80d491942ab12077f914ad3a45953f02 403 SUPERFAMILY SSF53067 2 144 6.47E-41 T 14-10-2018 VAB027_168 80d491942ab12077f914ad3a45953f02 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 1.6E-125 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VAB027_168 80d491942ab12077f914ad3a45953f02 403 PIRSF PIRSF015761 4 403 3.6E-38 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VAB027_168 80d491942ab12077f914ad3a45953f02 403 Gene3D G3DSA:3.30.420.380 3 238 4.9E-92 T 14-10-2018 VAB027_168 80d491942ab12077f914ad3a45953f02 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 1.0E-85 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VAB027_168 80d491942ab12077f914ad3a45953f02 403 Gene3D G3DSA:3.30.1360.100 318 403 8.2E-26 T 14-10-2018 VAB027_168 80d491942ab12077f914ad3a45953f02 403 Pfam PF12693 GspL periplasmic domain 246 402 1.1E-51 T 14-10-2018 IPR025691 GspL periplasmic domain VAB027_168 80d491942ab12077f914ad3a45953f02 403 SUPERFAMILY SSF53067 146 239 7.77E-22 T 14-10-2018 VAB027_3370 8e035776d1c5af7915f3277e3febb08a 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.572 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VAB027_3370 8e035776d1c5af7915f3277e3febb08a 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 6.8E-68 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VAB027_3370 8e035776d1c5af7915f3277e3febb08a 239 SUPERFAMILY SSF53335 15 236 3.92E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3370 8e035776d1c5af7915f3277e3febb08a 239 Pfam PF02390 Putative methyltransferase 62 232 3.6E-59 T 14-10-2018 VAB027_3370 8e035776d1c5af7915f3277e3febb08a 239 Gene3D G3DSA:3.40.50.150 29 239 1.3E-71 T 14-10-2018 VAB027_674 1eb2bf520a507f7c643592b57febfeab 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 87 6.5E-36 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VAB027_674 1eb2bf520a507f7c643592b57febfeab 87 SUPERFAMILY SSF143011 6 86 4.58E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_674 1eb2bf520a507f7c643592b57febfeab 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 87 4.7E-43 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VAB027_674 1eb2bf520a507f7c643592b57febfeab 87 Gene3D G3DSA:3.30.2310.20 5 87 1.6E-40 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_2355 773f00c402d1d063effb99c5be0001da 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 236 1.2E-12 T 14-10-2018 IPR000014 PAS domain VAB027_2355 773f00c402d1d063effb99c5be0001da 818 Gene3D G3DSA:3.20.20.450 412 670 5.5E-73 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2355 773f00c402d1d063effb99c5be0001da 818 SUPERFAMILY SSF54631 699 817 1.87E-9 T 14-10-2018 VAB027_2355 773f00c402d1d063effb99c5be0001da 818 SMART SM00091 126 192 2.1E-4 T 14-10-2018 IPR000014 PAS domain VAB027_2355 773f00c402d1d063effb99c5be0001da 818 Pfam PF00563 EAL domain 422 656 1.5E-63 T 14-10-2018 IPR001633 EAL domain VAB027_2355 773f00c402d1d063effb99c5be0001da 818 Gene3D G3DSA:3.30.450.20 125 280 4.0E-20 T 14-10-2018 VAB027_2355 773f00c402d1d063effb99c5be0001da 818 SUPERFAMILY SSF141868 420 664 5.89E-70 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2355 773f00c402d1d063effb99c5be0001da 818 SUPERFAMILY SSF55785 136 235 1.4E-17 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2355 773f00c402d1d063effb99c5be0001da 818 SMART SM00052 414 661 3.4E-67 T 14-10-2018 IPR001633 EAL domain VAB027_2355 773f00c402d1d063effb99c5be0001da 818 Pfam PF13426 PAS domain 137 236 1.7E-8 T 14-10-2018 IPR000014 PAS domain VAB027_2355 773f00c402d1d063effb99c5be0001da 818 Gene3D G3DSA:3.10.580.10 697 818 5.2E-8 T 14-10-2018 VAB027_1798 d1d4b8ad21431b536a0742591ba3d23b 287 Pfam PF01435 Peptidase family M48 79 287 9.1E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VAB027_1798 d1d4b8ad21431b536a0742591ba3d23b 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.568 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VAB027_1798 d1d4b8ad21431b536a0742591ba3d23b 287 Gene3D G3DSA:3.30.2010.10 68 161 4.3E-37 T 14-10-2018 VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 Gene3D G3DSA:3.40.190.10 43 539 1.2E-202 T 14-10-2018 VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 445 7.9E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 SUPERFAMILY SSF53850 40 539 1.81E-105 T 14-10-2018 VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 PIRSF PIRSF002741 7 532 2.9E-66 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 Gene3D G3DSA:3.10.105.10 268 515 1.2E-202 T 14-10-2018 VAB027_3228 29c7b15f26dc8c273ca386c3c05d6e21 556 Gene3D G3DSA:3.90.76.10 62 168 1.2E-202 T 14-10-2018 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 Gene3D G3DSA:3.30.70.120 1 112 7.3E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VAB027_2881 ac02f148f6674d262df96da462f531fa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 PIRSF PIRSF039144 1 112 1.5E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 SMART SM00938 4 105 6.4E-70 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2881 ac02f148f6674d262df96da462f531fa 112 SUPERFAMILY SSF54913 1 112 2.73E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 76 129 9.0E-6 T 14-10-2018 VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Gene3D G3DSA:2.160.10.10 172 343 6.5E-70 T 14-10-2018 VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 5.8E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Gene3D G3DSA:3.30.60.70 131 171 3.5E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VAB027_2960 5dede22a50d2a59964f2028580a98666 343 SUPERFAMILY SSF51161 90 323 2.77E-36 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Gene3D G3DSA:3.30.70.2010 1 130 1.1E-39 T 14-10-2018 VAB027_2960 5dede22a50d2a59964f2028580a98666 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 1.1E-177 T 14-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VAB027_2960 5dede22a50d2a59964f2028580a98666 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.821 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VAB027_362 d4fc05b35635b3a3e17a359d9d820bf4 138 Gene3D G3DSA:2.60.120.10 1 115 2.7E-45 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_362 d4fc05b35635b3a3e17a359d9d820bf4 138 Pfam PF06339 Ectoine synthase 1 126 2.4E-60 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VAB027_362 d4fc05b35635b3a3e17a359d9d820bf4 138 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 117 6.0E-66 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VAB027_362 d4fc05b35635b3a3e17a359d9d820bf4 138 SUPERFAMILY SSF51182 11 126 4.31E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_362 d4fc05b35635b3a3e17a359d9d820bf4 138 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 39.342 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VAB027_2583 21ce6d2d77a36928d967a890e9b9b6b1 431 PIRSF PIRSF028704 1 384 3.8E-131 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC VAB027_2583 21ce6d2d77a36928d967a890e9b9b6b1 431 Pfam PF10129 OpgC protein 3 361 2.2E-87 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 Gene3D G3DSA:1.10.1740.10 1 121 1.2E-45 T 14-10-2018 VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 Pfam PF08281 Sigma-70, region 4 134 181 4.0E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 SUPERFAMILY SSF88659 124 185 2.99E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 Pfam PF04542 Sigma-70 region 2 25 92 9.1E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 3.7E-101 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 9.0E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 Gene3D G3DSA:1.10.10.10 122 190 5.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3093 d87ec20adb1220e987f7b83a8c6dd7a9 190 SUPERFAMILY SSF88946 2 108 2.2E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 32.904 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 PIRSF PIRSF000437 19 808 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 SUPERFAMILY SSF69593 283 491 3.01E-26 T 14-10-2018 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 Pfam PF01553 Acyltransferase 289 424 7.2E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 SMART SM00563 300 427 6.3E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_84 b045921a56de85f5e59fccf6db504ba3 808 PIRSF PIRSF500064 3 808 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 Gene3D G3DSA:3.40.190.10 129 318 3.6E-122 T 14-10-2018 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 8.1E-87 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 PIRSF PIRSF019574 1 345 3.8E-125 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 SUPERFAMILY SSF53850 24 342 2.65E-94 T 14-10-2018 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 Gene3D G3DSA:3.40.190.10 29 312 3.6E-122 T 14-10-2018 VAB027_2097 a744b50be3a044263abb9d241f38fc0a 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 5.9E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.10.275.10 16 152 2.5E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 SUPERFAMILY SSF48557 14 468 1.16E-144 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 Pfam PF10415 Fumarase C C-terminus 421 474 3.1E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 Pfam PF00206 Lyase 23 355 1.4E-101 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.20.200.10 153 420 8.4E-113 T 14-10-2018 VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 2.1E-254 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.10.40.30 421 470 1.1E-29 T 14-10-2018 VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.6E-25 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.6E-25 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.6E-25 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_198 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.6E-25 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 Gene3D G3DSA:3.30.420.40 8 210 4.5E-33 T 14-10-2018 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 SUPERFAMILY SSF53067 223 460 1.25E-19 T 14-10-2018 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 SUPERFAMILY SSF53067 6 210 6.26E-32 T 14-10-2018 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 Pfam PF00012 Hsp70 protein 133 314 5.7E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 Gene3D G3DSA:3.90.640.10 263 342 4.5E-33 T 14-10-2018 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.2E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.2E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.2E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 Pfam PF12531 DNA-K related protein 692 939 1.6E-102 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 VAB027_2049 3392651d59043ed9e2d8d4d777a17970 942 Gene3D G3DSA:3.30.420.40 211 262 4.5E-33 T 14-10-2018 VAB027_2951 a27401756df6946e3426da6dad871240 445 Gene3D G3DSA:3.40.630.30 297 445 9.6E-38 T 14-10-2018 VAB027_2951 a27401756df6946e3426da6dad871240 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 1.5E-229 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VAB027_2951 a27401756df6946e3426da6dad871240 445 Pfam PF00696 Amino acid kinase family 25 268 1.2E-25 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_2951 a27401756df6946e3426da6dad871240 445 Gene3D G3DSA:3.40.1160.10 7 296 1.7E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2951 a27401756df6946e3426da6dad871240 445 PIRSF PIRSF000423 1 445 1.6E-205 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VAB027_2951 a27401756df6946e3426da6dad871240 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 224.648 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VAB027_2951 a27401756df6946e3426da6dad871240 445 SUPERFAMILY SSF53633 4 294 7.68E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2951 a27401756df6946e3426da6dad871240 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 411 2.2E-4 T 14-10-2018 IPR000182 GNAT domain VAB027_2951 a27401756df6946e3426da6dad871240 445 SUPERFAMILY SSF55729 300 422 2.92E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1943 fcc550ec78055703d8a854a5cb58ab2e 360 Gene3D G3DSA:2.130.10.10 44 236 4.5E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_1943 fcc550ec78055703d8a854a5cb58ab2e 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 9.0E-115 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VAB027_1943 fcc550ec78055703d8a854a5cb58ab2e 360 SUPERFAMILY SSF50969 52 326 1.26E-12 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VAB027_1943 fcc550ec78055703d8a854a5cb58ab2e 360 PIRSF PIRSF028101 4 360 1.9E-168 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VAB027_1843 c5af02a029c462c2d3ce8bbc8cf67d89 323 SUPERFAMILY SSF53335 91 323 5.88E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1843 c5af02a029c462c2d3ce8bbc8cf67d89 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 321 2.4E-146 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VAB027_1843 c5af02a029c462c2d3ce8bbc8cf67d89 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.1E-172 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VAB027_1843 c5af02a029c462c2d3ce8bbc8cf67d89 323 Gene3D G3DSA:3.40.50.150 73 293 2.6E-24 T 14-10-2018 VAB027_1843 c5af02a029c462c2d3ce8bbc8cf67d89 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 53.937 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 7.9E-23 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 6.8E-34 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 88 3.0E-40 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 1.3E-45 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 26.862 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 Gene3D G3DSA:3.90.470.20 1 126 1.3E-43 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAB027_3083 cd5ebc14ce3aa3037f91b6f5404ee188 126 SUPERFAMILY SSF56214 1 124 2.22E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAB027_557 e0c9e383c45e9d19c56dcd43d73ffb51 135 Pfam PF14760 Rnk N-terminus 6 43 9.6E-12 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VAB027_557 e0c9e383c45e9d19c56dcd43d73ffb51 135 SUPERFAMILY SSF54534 49 126 1.96E-16 T 14-10-2018 VAB027_557 e0c9e383c45e9d19c56dcd43d73ffb51 135 Gene3D G3DSA:3.10.50.30 45 135 9.8E-27 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAB027_557 e0c9e383c45e9d19c56dcd43d73ffb51 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 4.3E-16 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAB027_557 e0c9e383c45e9d19c56dcd43d73ffb51 135 PIRSF PIRSF006092 16 127 3.7E-27 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VAB027_2331 86275a8e746731a88dc1e3daa91a4f02 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.9E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_2331 86275a8e746731a88dc1e3daa91a4f02 331 SUPERFAMILY SSF52540 3 268 2.02E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2331 86275a8e746731a88dc1e3daa91a4f02 331 SMART SM00382 32 237 6.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2331 86275a8e746731a88dc1e3daa91a4f02 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 3.3E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_2331 86275a8e746731a88dc1e3daa91a4f02 331 Pfam PF00005 ABC transporter 24 187 2.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2331 86275a8e746731a88dc1e3daa91a4f02 331 Gene3D G3DSA:3.40.50.300 2 329 3.5E-72 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Gene3D G3DSA:1.20.58.850 621 831 5.8E-135 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Gene3D G3DSA:3.40.1140.10 1 227 7.0E-97 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.827 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Pfam PF04310 MukB N-terminal 2 227 1.2E-122 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 SUPERFAMILY SSF52540 23 224 2.31E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Gene3D G3DSA:1.20.1060.30 668 779 5.8E-135 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Gene3D G3DSA:3.40.1140.10 1383 1469 1.1E-38 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 PIRSF PIRSF005246 1 1487 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Gene3D G3DSA:1.20.58.850 583 852 5.8E-135 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.7E-15 T 14-10-2018 VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 Pfam PF16330 MukB hinge domain 646 811 3.2E-73 T 14-10-2018 IPR032520 MukB, hinge domain VAB027_2359 924fe3b3b8c48e37be8105b5f7f52e39 1491 SUPERFAMILY SSF52540 21 1434 2.79E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 Pfam PF00406 Adenylate kinase 5 185 1.4E-59 T 14-10-2018 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 SUPERFAMILY SSF52540 1 213 6.71E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.2E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.2E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 Gene3D G3DSA:3.40.50.300 1 214 9.8E-78 T 14-10-2018 VAB027_1673 236dfa3517bbc77faf848170b59a90d9 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.035 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 Gene3D G3DSA:3.40.50.300 4 242 2.2E-56 T 14-10-2018 VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 SMART SM00382 25 208 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 357 1.0E-160 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 Pfam PF03459 TOBE domain 293 358 2.7E-18 T 14-10-2018 IPR005116 Transport-associated OB, type 1 VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 SUPERFAMILY SSF50331 236 357 1.22E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 Gene3D G3DSA:2.40.50.100 292 358 2.4E-13 T 14-10-2018 VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 SUPERFAMILY SSF52540 7 237 7.44E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_456 b3683e8f1bdca7e07d85c1e4c77c2278 366 Pfam PF00005 ABC transporter 18 158 4.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 SUPERFAMILY SSF52540 205 443 1.27E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 SUPERFAMILY SSF55021 1 68 1.48E-6 T 14-10-2018 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 SMART SM00091 80 146 2.9E-5 T 14-10-2018 IPR000014 PAS domain VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Pfam PF00158 Sigma-54 interaction domain 206 370 8.2E-58 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 464 512 7.2E-27 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 SUPERFAMILY SSF46689 457 511 2.75E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Gene3D G3DSA:3.30.450.20 82 186 9.6E-22 T 14-10-2018 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Gene3D G3DSA:3.30.70.260 1 80 3.4E-25 T 14-10-2018 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Gene3D G3DSA:1.10.10.60 458 512 1.3E-24 T 14-10-2018 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Gene3D G3DSA:1.10.8.60 376 453 1.5E-16 T 14-10-2018 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 SMART SM00382 225 368 4.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Gene3D G3DSA:3.40.50.300 196 375 1.3E-58 T 14-10-2018 VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 SUPERFAMILY SSF55785 83 161 2.62E-8 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1984 1c697ccffd7c039e91da62ad08d2dcfa 513 Pfam PF00989 PAS fold 84 130 5.5E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 VAB027_2414 ce760888997caef0dde2d1645ccecb44 268 Gene3D G3DSA:3.30.1330.60 154 265 2.7E-13 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2414 ce760888997caef0dde2d1645ccecb44 268 PRINTS PR01021 OMPA domain signature 165 187 8.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2414 ce760888997caef0dde2d1645ccecb44 268 PRINTS PR01021 OMPA domain signature 210 226 8.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2414 ce760888997caef0dde2d1645ccecb44 268 PRINTS PR01021 OMPA domain signature 195 210 8.9E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2414 ce760888997caef0dde2d1645ccecb44 268 SUPERFAMILY SSF103088 156 241 7.72E-15 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2414 ce760888997caef0dde2d1645ccecb44 268 Pfam PF00691 OmpA family 164 231 1.6E-10 T 14-10-2018 IPR006665 OmpA-like domain VAB027_1145 d3379c6c9286d368a7a1f3846105e286 564 Pfam PF02652 L-lactate permease 7 547 1.2E-107 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VAB027_1145 d3379c6c9286d368a7a1f3846105e286 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 1.2E-104 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 SUPERFAMILY SSF50193 2 122 6.67E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 Gene3D G3DSA:2.40.150.20 1 123 6.3E-57 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.738 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 8.6E-59 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.3E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VAB027_1283 506aca06406bb5a23accfbeabd9dcebe 123 SMART SM01374 1 123 2.8E-86 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 8.9E-89 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 Gene3D G3DSA:3.40.50.720 119 239 1.2E-90 T 14-10-2018 VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 SUPERFAMILY SSF53223 6 105 1.38E-32 T 14-10-2018 VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.101 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 115 195 9.3E-14 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 SUPERFAMILY SSF51735 106 273 1.16E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 Gene3D G3DSA:3.40.50.10860 8 258 1.2E-90 T 14-10-2018 VAB027_43 b741108d5bc62caa5fc3937e4a86eb6f 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 8.0E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VAB027_984 dba04e18b6992537e3e1c9684f5317c3 250 SUPERFAMILY SSF48317 14 241 2.35E-26 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VAB027_984 dba04e18b6992537e3e1c9684f5317c3 250 Gene3D G3DSA:1.20.144.10 8 243 1.5E-49 T 14-10-2018 VAB027_984 dba04e18b6992537e3e1c9684f5317c3 250 SMART SM00014 85 230 2.5E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAB027_984 dba04e18b6992537e3e1c9684f5317c3 250 Pfam PF01569 PAP2 superfamily 86 233 1.4E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 SUPERFAMILY SSF55785 16 123 5.23E-9 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 301 9.4E-43 T 14-10-2018 IPR000160 GGDEF domain VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 303 8.9E-43 T 14-10-2018 IPR000160 GGDEF domain VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 SUPERFAMILY SSF55073 140 306 6.2E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 130 5.6E-6 T 14-10-2018 IPR000014 PAS domain VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 Gene3D G3DSA:3.30.70.270 130 313 1.1E-48 T 14-10-2018 VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 SMART SM00267 124 305 1.6E-47 T 14-10-2018 IPR000160 GGDEF domain VAB027_2465 56f07f55e4a2022d2f7706d583b4b6c8 315 Gene3D G3DSA:3.30.450.20 9 126 3.6E-8 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 363 374 1.7E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 308 328 1.7E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 342 358 1.7E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 425 441 1.7E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Gene3D G3DSA:3.10.450.490 23 110 1.3E-7 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 207 351 3.7E-35 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 100 5.5E-12 T 14-10-2018 IPR011096 FTP domain VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Gene3D G3DSA:3.10.170.10 198 355 7.0E-60 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 SUPERFAMILY SSF89260 511 607 1.7E-6 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Gene3D G3DSA:3.10.450.40 111 195 5.3E-26 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 SUPERFAMILY SSF55486 200 500 4.94E-82 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Gene3D G3DSA:2.60.120.380 510 609 3.0E-38 T 14-10-2018 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 354 498 1.2E-34 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Gene3D G3DSA:1.10.390.10 356 505 1.7E-48 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Pfam PF03413 Peptidase propeptide and YPEB domain 118 190 8.8E-10 T 14-10-2018 IPR025711 PepSY domain VAB027_324 392fbb4d457a6cf78d96de0f57eee03e 609 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 529 596 3.1E-13 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF03572 Peptidase family S41 900 1054 3.3E-20 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 SUPERFAMILY SSF52096 705 1081 5.8E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 SUPERFAMILY SSF69304 339 542 1.44E-21 T 14-10-2018 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 SMART SM00245 861 1056 2.2E-4 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Gene3D G3DSA:3.90.226.10 878 1084 5.6E-50 T 14-10-2018 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Gene3D G3DSA:2.120.10.60 30 317 1.7E-60 T 14-10-2018 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 SUPERFAMILY SSF50156 790 868 2.26E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Gene3D G3DSA:2.30.42.10 783 877 7.0E-7 T 14-10-2018 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 129 143 0.014 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 366 401 1.9E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 77 101 9.3E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 43 56 0.12 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 227 262 1.6E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF07676 WD40-like Beta Propeller Repeat 517 540 0.059 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 PIRSF PIRSF036421 29 1084 7.7E-199 T 14-10-2018 IPR012393 Tricorn protease GO:0008236 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Gene3D G3DSA:2.120.10.30 329 414 1.4E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Gene3D G3DSA:2.120.10.30 415 571 1.9E-12 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Pfam PF14684 Tricorn protease C1 domain 708 773 1.4E-25 T 14-10-2018 IPR028204 Tricorn protease C1 domain VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 Gene3D G3DSA:3.30.750.44 705 776 5.8E-15 T 14-10-2018 VAB027_974 afbadbaac2d4c0da6745dc2d83403ed0 1084 SUPERFAMILY SSF69304 42 310 2.09E-42 T 14-10-2018 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PIRSF PIRSF036480 1 277 4.2E-111 T 14-10-2018 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 SUPERFAMILY SSF55021 4 55 7.08E-9 T 14-10-2018 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 Gene3D G3DSA:3.30.70.260 1 76 2.6E-15 T 14-10-2018 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 SUPERFAMILY SSF53328 82 276 5.63E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 Pfam PF01842 ACT domain 5 64 7.2E-8 T 14-10-2018 IPR002912 ACT domain VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 4.0E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 4.0E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 4.0E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 4.0E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 4.0E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 4.0E-66 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.038 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.7E-123 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 Gene3D G3DSA:3.40.50.170 82 277 5.8E-67 T 14-10-2018 VAB027_2627 6c3e9bfbecb6d45be124394594722c49 277 Pfam PF00551 Formyl transferase 82 259 7.2E-50 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Gene3D G3DSA:3.40.50.300 615 935 9.7E-141 T 14-10-2018 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 SUPERFAMILY SSF52540 4 568 9.69E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Gene3D G3DSA:3.40.50.300 6 593 5.2E-248 T 14-10-2018 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Gene3D G3DSA:3.30.190.20 130 243 5.2E-248 T 14-10-2018 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 SUPERFAMILY SSF52540 621 909 2.1E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Gene3D G3DSA:1.20.1580.10 691 829 9.7E-141 T 14-10-2018 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Gene3D G3DSA:1.10.8.280 286 402 5.2E-248 T 14-10-2018 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Pfam PF00005 ABC transporter 622 859 6.9E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 23.045 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 Gene3D G3DSA:1.20.1580.10 90 491 5.2E-248 T 14-10-2018 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3437 1738e6929b446dbcce94e2d8e918aad0 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 SUPERFAMILY SSF52172 3 127 2.28E-42 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 SMART SM00862 156 232 1.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 Gene3D G3DSA:1.10.10.10 130 239 1.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 8.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 SMART SM00448 5 116 3.6E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-40 T 14-10-2018 VAB027_180 d8730ee9a3ac17db35b44378c8286578 240 SUPERFAMILY SSF46894 132 234 1.3E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 SMART SM00382 347 491 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:1.20.58.1480 119 244 2.3E-44 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 1.1E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:1.10.8.60 490 583 1.2E-32 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 SUPERFAMILY SSF54211 594 769 7.97E-60 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 SUPERFAMILY SSF52540 313 586 1.14E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.8E-40 T 14-10-2018 IPR003111 Lon, substrate-binding domain VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Hamap MF_01973 Lon protease [lon]. 11 771 72.293 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:3.30.230.10 584 771 2.4E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.2E-56 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.2E-56 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.2E-56 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.2E-56 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.2E-56 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.0E-99 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 SMART SM00464 10 201 2.6E-76 T 14-10-2018 IPR003111 Lon, substrate-binding domain VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:3.40.50.300 312 489 3.5E-61 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 SUPERFAMILY SSF88697 10 200 1.19E-48 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 Gene3D G3DSA:2.30.130.40 1 116 1.6E-35 T 14-10-2018 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VAB027_2564 a13265778d972b64f53902c49a1ced3f 786 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.103 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 Gene3D G3DSA:2.40.30.10 242 327 5.7E-27 T 14-10-2018 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 SUPERFAMILY SSF50465 333 434 3.31E-28 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 1.2E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 4.2E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 SUPERFAMILY SSF50447 241 324 4.57E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 Gene3D G3DSA:3.40.50.300 5 239 6.5E-73 T 14-10-2018 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 Gene3D G3DSA:2.40.30.10 331 433 1.2E-26 T 14-10-2018 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 4.4E-196 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAB027_1310 ef703b7a507922720bb47cb4a7a01b24 476 SUPERFAMILY SSF52540 22 235 2.58E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2971 320aa68f25f680370a1f22fa520a4580 384 Gene3D G3DSA:1.10.3210.10 172 376 5.5E-45 T 14-10-2018 VAB027_2971 320aa68f25f680370a1f22fa520a4580 384 SUPERFAMILY SSF55781 32 150 1.18E-8 T 14-10-2018 VAB027_2971 320aa68f25f680370a1f22fa520a4580 384 Gene3D G3DSA:3.30.450.40 18 160 2.8E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_2971 320aa68f25f680370a1f22fa520a4580 384 Pfam PF13487 HD domain 244 313 7.4E-13 T 14-10-2018 VAB027_2971 320aa68f25f680370a1f22fa520a4580 384 SUPERFAMILY SSF109604 169 361 5.65E-23 T 14-10-2018 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 663 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 Gene3D G3DSA:3.40.50.970 1 325 8.8E-133 T 14-10-2018 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 Gene3D G3DSA:3.40.50.970 326 537 4.3E-83 T 14-10-2018 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 SMART SM00861 354 525 6.9E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 SUPERFAMILY SSF52518 4 328 1.05E-120 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 SUPERFAMILY SSF52922 533 664 1.06E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 1.1E-18 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 1.1E-168 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 4.0E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 Gene3D G3DSA:3.40.50.920 538 664 6.0E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 SUPERFAMILY SSF52518 332 526 5.89E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_543 56f637eebf53dd4ad3afb00c0d5d3ff6 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_805 7f4c2b4d2d3fe88f2e118b71b1c28398 215 Gene3D G3DSA:3.20.20.70 1 215 1.0E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_805 7f4c2b4d2d3fe88f2e118b71b1c28398 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 204 5.1E-28 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_805 7f4c2b4d2d3fe88f2e118b71b1c28398 215 SUPERFAMILY SSF51366 1 212 6.65E-34 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_805 7f4c2b4d2d3fe88f2e118b71b1c28398 215 SMART SM00934 5 207 7.5E-24 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1971 5cb9aec4a2c2c74db501433bc9e59c00 481 SUPERFAMILY SSF109604 270 466 6.28E-30 T 14-10-2018 VAB027_1971 5cb9aec4a2c2c74db501433bc9e59c00 481 SUPERFAMILY SSF158472 227 266 5.36E-5 T 14-10-2018 VAB027_1971 5cb9aec4a2c2c74db501433bc9e59c00 481 Pfam PF01966 HD domain 295 429 1.4E-17 T 14-10-2018 IPR006674 HD domain VAB027_1971 5cb9aec4a2c2c74db501433bc9e59c00 481 SMART SM00304 217 269 6.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1971 5cb9aec4a2c2c74db501433bc9e59c00 481 Gene3D G3DSA:1.10.3210.10 267 481 5.4E-73 T 14-10-2018 VAB027_1971 5cb9aec4a2c2c74db501433bc9e59c00 481 SMART SM00471 289 439 6.9E-9 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Gene3D G3DSA:3.40.50.300 135 313 1.0E-57 T 14-10-2018 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 SUPERFAMILY SSF52172 3 189 1.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 SMART SM00382 165 305 9.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Pfam PF00072 Response regulator receiver domain 6 115 2.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Pfam PF02954 Bacterial regulatory protein, Fis family 400 438 1.5E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 SUPERFAMILY SSF46689 388 440 3.81E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Pfam PF00158 Sigma-54 interaction domain 145 308 6.8E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Gene3D G3DSA:1.10.8.60 314 389 1.7E-13 T 14-10-2018 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Gene3D G3DSA:3.40.50.2300 1 134 2.0E-34 T 14-10-2018 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 SUPERFAMILY SSF52540 145 367 2.11E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 Gene3D G3DSA:1.10.10.60 390 442 7.5E-9 T 14-10-2018 VAB027_890 e2f442551a66f47cc23dbe50c863d198 450 SMART SM00448 4 115 1.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.8E-86 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 Gene3D G3DSA:3.30.750.120 1 112 6.5E-36 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 29.517 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 Gene3D G3DSA:2.160.20.70 113 220 1.2E-32 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 7.8E-33 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 SUPERFAMILY SSF63848 113 218 4.18E-32 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VAB027_2597 c3fae666cbab29732a6a0cc6072dcedf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.2E-37 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VAB027_1619 16f69a3bb775738317257d1bb5da289d 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 58 229 2.9E-50 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 VAB027_1619 16f69a3bb775738317257d1bb5da289d 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 225 1.1E-61 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:3.40.50.2300 169 308 4.6E-27 T 14-10-2018 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 SUPERFAMILY SSF50341 16 157 2.09E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 PIRSF PIRSF002867 1 308 5.7E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 Pfam PF00072 Response regulator receiver domain 184 302 4.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 SMART SM00260 17 153 4.3E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:2.30.30.40 23 147 3.0E-28 T 14-10-2018 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 Pfam PF01584 CheW-like domain 21 155 4.9E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:2.40.50.180 39 153 3.0E-28 T 14-10-2018 VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 SUPERFAMILY SSF52172 183 306 1.57E-26 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2844 e7dfc48e5aba5881bae0aa00bc69fe04 308 SMART SM00448 182 302 5.7E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:3.30.300.180 2 114 6.4E-42 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.634 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.8E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF00308 Bacterial dnaA protein 133 349 2.6E-98 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Pfam PF11638 DnaA N-terminal domain 4 64 3.0E-19 T 14-10-2018 IPR024633 DnaA N-terminal domain VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:1.10.1750.10 374 467 1.4E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:3.40.50.300 117 296 2.9E-49 T 14-10-2018 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 SMART SM00760 375 444 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 7.4E-187 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 Gene3D G3DSA:1.10.8.60 298 368 1.5E-25 T 14-10-2018 VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 SUPERFAMILY SSF52540 132 343 7.91E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 SMART SM00382 164 377 4.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1 60f800a7e00eb6923501cc5f30be16ae 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 Pfam PF00171 Aldehyde dehydrogenase family 581 1037 7.7E-120 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 Gene3D G3DSA:3.20.20.220 153 525 6.5E-132 T 14-10-2018 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 6.6E-44 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 Gene3D G3DSA:3.40.309.10 814 1006 2.6E-151 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 SUPERFAMILY SSF51730 190 532 1.65E-114 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1038 1.6E-280 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 SUPERFAMILY SSF81935 17 189 1.15E-61 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 PIRSF PIRSF000197 3 1039 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 SUPERFAMILY SSF53720 556 1038 9.42E-130 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 Gene3D G3DSA:3.40.605.10 548 1037 2.6E-151 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_1061 c995293a78c9a06155c0413e041a4d77 1039 Pfam PF01619 Proline dehydrogenase 197 490 5.5E-93 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 3.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 3.3E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:1.10.10.350 369 473 4.6E-24 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 5.6E-116 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.325 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 SUPERFAMILY SSF52374 3 301 8.04E-109 T 14-10-2018 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 SUPERFAMILY SSF48163 302 464 3.79E-47 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:3.40.50.620 2 317 8.8E-134 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2856 4bb3cce6456d929add96fc10f5482e7c 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.0E-193 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAB027_2129 1092f5174a43491914a5630e83f3dec0 172 Gene3D G3DSA:3.10.129.10 2 172 7.2E-65 T 14-10-2018 VAB027_2129 1092f5174a43491914a5630e83f3dec0 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 1.3E-91 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2129 1092f5174a43491914a5630e83f3dec0 172 Pfam PF07977 FabA-like domain 29 158 2.5E-54 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2129 1092f5174a43491914a5630e83f3dec0 172 SUPERFAMILY SSF54637 4 169 3.43E-56 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_2129 1092f5174a43491914a5630e83f3dec0 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.433 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 SUPERFAMILY SSF56784 10 236 7.5E-40 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 2.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 2.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.4E-14 T 14-10-2018 VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 199 5.9E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 Gene3D G3DSA:3.40.50.1000 12 232 3.1E-60 T 14-10-2018 IPR023214 HAD superfamily VAB027_111 31a13935ecdbdc3a0a212e938430a9a5 239 Gene3D G3DSA:1.20.120.1600 24 110 3.1E-60 T 14-10-2018 VAB027_1395 9a553a11c6d9101fd8e8196c0d2db852 149 SUPERFAMILY SSF54631 1 132 6.06E-31 T 14-10-2018 VAB027_1395 9a553a11c6d9101fd8e8196c0d2db852 149 Gene3D G3DSA:3.10.580.10 1 149 6.8E-57 T 14-10-2018 VAB027_1395 9a553a11c6d9101fd8e8196c0d2db852 149 SMART SM00116 11 59 1.1E-6 T 14-10-2018 IPR000644 CBS domain VAB027_1395 9a553a11c6d9101fd8e8196c0d2db852 149 SMART SM00116 84 131 1.7E-4 T 14-10-2018 IPR000644 CBS domain VAB027_1395 9a553a11c6d9101fd8e8196c0d2db852 149 Pfam PF00571 CBS domain 79 127 8.0E-7 T 14-10-2018 IPR000644 CBS domain VAB027_1395 9a553a11c6d9101fd8e8196c0d2db852 149 Pfam PF00571 CBS domain 4 58 1.2E-12 T 14-10-2018 IPR000644 CBS domain VAB027_2434 8cd774726a272766c4f3a40e1b1085d8 270 Gene3D G3DSA:3.40.190.10 115 234 5.4E-77 T 14-10-2018 VAB027_2434 8cd774726a272766c4f3a40e1b1085d8 270 SUPERFAMILY SSF53850 22 267 1.72E-24 T 14-10-2018 VAB027_2434 8cd774726a272766c4f3a40e1b1085d8 270 Gene3D G3DSA:3.40.190.10 25 266 5.4E-77 T 14-10-2018 VAB027_2434 8cd774726a272766c4f3a40e1b1085d8 270 Pfam PF13531 Bacterial extracellular solute-binding protein 24 266 8.2E-24 T 14-10-2018 VAB027_3168 6c6a4b650beaa41462799be7d4f7eaf7 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.4E-31 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3168 6c6a4b650beaa41462799be7d4f7eaf7 86 Pfam PF01649 Ribosomal protein S20 2 84 8.3E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3168 6c6a4b650beaa41462799be7d4f7eaf7 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-36 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3168 6c6a4b650beaa41462799be7d4f7eaf7 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.341 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3168 6c6a4b650beaa41462799be7d4f7eaf7 86 SUPERFAMILY SSF46992 3 86 2.49E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3168 6c6a4b650beaa41462799be7d4f7eaf7 86 Gene3D G3DSA:1.20.58.110 1 86 1.3E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2507 e5a84fe32d0d600c8e1fc18961012841 256 PIRSF PIRSF039085 3 256 1.2E-120 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAB027_2507 e5a84fe32d0d600c8e1fc18961012841 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2507 e5a84fe32d0d600c8e1fc18961012841 256 Pfam PF00005 ABC transporter 22 181 4.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2507 e5a84fe32d0d600c8e1fc18961012841 256 Gene3D G3DSA:3.40.50.300 3 255 8.9E-78 T 14-10-2018 VAB027_2507 e5a84fe32d0d600c8e1fc18961012841 256 SMART SM00382 31 229 2.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2507 e5a84fe32d0d600c8e1fc18961012841 256 SUPERFAMILY SSF52540 7 251 5.83E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1714 14697566cd56a00998dd7df0003f829b 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 SUPERFAMILY SSF81653 265 361 9.02E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 1.4E-172 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 SUPERFAMILY SSF56784 460 757 1.71E-48 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Pfam PF00122 E1-E2 ATPase 263 442 4.3E-47 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Pfam PF00403 Heavy-metal-associated domain 79 135 2.0E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Gene3D G3DSA:3.40.50.1000 443 709 5.6E-81 T 14-10-2018 IPR023214 HAD superfamily VAB027_1714 14697566cd56a00998dd7df0003f829b 768 ProSitePatterns PS01229 Hypothetical cof family signature 2. 657 679 - T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Gene3D G3DSA:3.40.1110.10 473 591 5.6E-81 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Gene3D G3DSA:3.30.70.100 73 141 1.2E-14 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Gene3D G3DSA:2.70.150.20 262 366 1.8E-30 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 SUPERFAMILY SSF81665 215 739 4.71E-20 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 458 670 8.7E-39 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 738 1.8E-78 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00941 Cadmium-transporting ATPase signature 88 109 2.1E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 2.1E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 2.1E-5 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.1E-27 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 1.1E-27 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.1E-27 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.1E-27 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.1E-27 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.1E-27 T 14-10-2018 VAB027_1714 14697566cd56a00998dd7df0003f829b 768 SUPERFAMILY SSF55008 71 140 7.72E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAB027_2645 57b03dd87bb1a64a642a153dc128a1bf 196 SUPERFAMILY SSF56925 20 196 4.19E-18 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_2645 57b03dd87bb1a64a642a153dc128a1bf 196 Gene3D G3DSA:2.40.160.20 19 196 1.8E-12 T 14-10-2018 VAB027_2295 b882305fecb8fa2a19c60523b2a93f9a 587 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 4.9E-32 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VAB027_2295 b882305fecb8fa2a19c60523b2a93f9a 587 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 373 4.3E-21 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_2295 b882305fecb8fa2a19c60523b2a93f9a 587 SUPERFAMILY SSF53850 116 585 2.17E-61 T 14-10-2018 VAB027_2295 b882305fecb8fa2a19c60523b2a93f9a 587 Gene3D G3DSA:3.40.190.10 120 372 2.6E-29 T 14-10-2018 VAB027_1694 7f29a1da8eda870e465ed955fd227ca0 138 SUPERFAMILY SSF54593 2 130 2.82E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_1694 7f29a1da8eda870e465ed955fd227ca0 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAB027_1694 7f29a1da8eda870e465ed955fd227ca0 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAB027_1694 7f29a1da8eda870e465ed955fd227ca0 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 1.6E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAB027_1694 7f29a1da8eda870e465ed955fd227ca0 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 4.3E-23 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_1694 7f29a1da8eda870e465ed955fd227ca0 138 Gene3D G3DSA:3.10.180.10 3 136 5.7E-51 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_1098 4b2e5d1330d347681e7030e8eb3cbe0a 458 SUPERFAMILY SSF53850 21 405 3.36E-63 T 14-10-2018 VAB027_1098 4b2e5d1330d347681e7030e8eb3cbe0a 458 Pfam PF01547 Bacterial extracellular solute-binding protein 32 318 6.4E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_1098 4b2e5d1330d347681e7030e8eb3cbe0a 458 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 128 145 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VAB027_1098 4b2e5d1330d347681e7030e8eb3cbe0a 458 Gene3D G3DSA:3.40.190.10 37 347 4.7E-57 T 14-10-2018 VAB027_1098 4b2e5d1330d347681e7030e8eb3cbe0a 458 Gene3D G3DSA:3.40.190.10 132 395 4.7E-57 T 14-10-2018 VAB027_2154 18739b42cb21cb0d19d7de832d9fa03d 160 SUPERFAMILY SSF89963 2 86 1.05E-29 T 14-10-2018 IPR036183 YajQ-like superfamily VAB027_2154 18739b42cb21cb0d19d7de832d9fa03d 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 5.3E-63 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VAB027_2154 18739b42cb21cb0d19d7de832d9fa03d 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.689 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VAB027_2154 18739b42cb21cb0d19d7de832d9fa03d 160 Gene3D G3DSA:3.30.70.990 9 94 2.2E-26 T 14-10-2018 IPR035570 UPF0234, N-terminal VAB027_2154 18739b42cb21cb0d19d7de832d9fa03d 160 Gene3D G3DSA:3.30.70.860 95 160 5.3E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VAB027_2154 18739b42cb21cb0d19d7de832d9fa03d 160 SUPERFAMILY SSF89963 88 159 1.36E-28 T 14-10-2018 IPR036183 YajQ-like superfamily VAB027_1926 0a970f8b6c1e2708f2445e71d9f3557b 170 Gene3D G3DSA:3.30.70.260 86 170 2.2E-11 T 14-10-2018 VAB027_1926 0a970f8b6c1e2708f2445e71d9f3557b 170 Pfam PF13740 ACT domain 4 64 3.8E-10 T 14-10-2018 VAB027_1926 0a970f8b6c1e2708f2445e71d9f3557b 170 SUPERFAMILY SSF55021 88 166 5.0E-9 T 14-10-2018 VAB027_1926 0a970f8b6c1e2708f2445e71d9f3557b 170 PIRSF PIRSF028103 1 170 1.4E-53 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 2.0E-48 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.1E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 SUPERFAMILY SSF47729 1 91 3.68E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 92 30.277 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.4E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.4E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.4E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 SMART SM00411 1 91 9.0E-44 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Gene3D G3DSA:4.10.520.10 40 92 2.1E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_2558 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Gene3D G3DSA:4.10.520.10 2 39 2.2E-11 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 SMART SM00471 41 153 3.7E-11 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:3.10.20.30 382 456 5.4E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:1.10.3210.10 3 190 1.5E-79 T 14-10-2018 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:3.30.70.260 626 705 5.7E-14 T 14-10-2018 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF109604 3 190 1.82E-74 T 14-10-2018 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 3.4E-271 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF81301 180 393 4.58E-59 T 14-10-2018 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF02824 TGS domain 389 447 2.3E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF81271 376 448 1.05E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:3.30.460.10 193 325 5.2E-46 T 14-10-2018 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF13328 HD domain 28 175 4.2E-53 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF13291 ACT domain 626 702 1.4E-14 T 14-10-2018 IPR002912 ACT domain VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF55021 630 702 1.83E-8 T 14-10-2018 VAB027_184 145528de7c62dbf47f0a4009deffc2a6 705 SMART SM00954 235 345 6.9E-57 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 Gene3D G3DSA:3.30.160.70 1 70 8.5E-20 T 14-10-2018 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 44.254 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.1E-38 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 Gene3D G3DSA:1.10.10.10 74 157 4.3E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 SUPERFAMILY SSF46767 74 155 9.03E-34 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 5.9E-34 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VAB027_1113 2367a7b5ba0b8ba00643e429d7482846 157 SUPERFAMILY SSF53155 4 79 2.55E-20 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.8E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 Gene3D G3DSA:3.40.50.1370 151 319 7.3E-146 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 Gene3D G3DSA:3.40.50.1370 5 329 7.3E-146 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.7E-134 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 SUPERFAMILY SSF53671 4 333 8.25E-100 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.317 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.6E-56 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VAB027_1356 e8590d5c59aabb7de573ae1ff76f658c 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 8.9E-46 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VAB027_2654 f2fe3dfd88317ad29fe40dcbe1cd4456 338 Pfam PF02618 YceG-like family 43 328 4.3E-86 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VAB027_2654 f2fe3dfd88317ad29fe40dcbe1cd4456 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 333 34.177 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VAB027_2654 f2fe3dfd88317ad29fe40dcbe1cd4456 338 Gene3D G3DSA:3.30.160.60 302 338 7.8E-19 T 14-10-2018 VAB027_2654 f2fe3dfd88317ad29fe40dcbe1cd4456 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 336 3.0E-100 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VAB027_2654 f2fe3dfd88317ad29fe40dcbe1cd4456 338 Gene3D G3DSA:3.30.160.60 74 110 4.6E-12 T 14-10-2018 VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SMART SM00419 187 235 1.1E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.6E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Gene3D G3DSA:2.60.120.10 43 164 2.5E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.4E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SMART SM00100 30 151 1.4E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SUPERFAMILY SSF46785 165 244 4.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Gene3D G3DSA:1.10.10.10 165 250 1.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2107 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SUPERFAMILY SSF51206 23 162 1.22E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 SUPERFAMILY SSF52540 4 167 2.47E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Gene3D G3DSA:3.40.50.300 201 378 3.2E-48 T 14-10-2018 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.5E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.5E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 461 1.0E-180 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 SUPERFAMILY SSF52540 137 467 7.02E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 PIRSF PIRSF006485 1 469 2.1E-181 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Pfam PF01926 50S ribosome-binding GTPase 208 325 2.1E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.4E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Hamap MF_00195 GTPase Der [der]. 2 464 39.078 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Gene3D G3DSA:3.30.300.20 381 463 5.1E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Gene3D G3DSA:3.40.50.300 2 160 9.9E-43 T 14-10-2018 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 370 8.3E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.1E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 381 460 1.1E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 SMART SM00382 1 138 2.9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1419 21b003a56ab7630959d1c79188fd8ef4 494 SMART SM00382 204 341 0.54 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3618 bf9dda40867f11baf3414f8953442829 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 70 2.0E-5 T 14-10-2018 VAB027_3618 bf9dda40867f11baf3414f8953442829 126 Gene3D G3DSA:3.40.50.1000 1 126 6.4E-44 T 14-10-2018 IPR023214 HAD superfamily VAB027_3618 bf9dda40867f11baf3414f8953442829 126 SUPERFAMILY SSF56784 1 108 2.16E-26 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_3618 bf9dda40867f11baf3414f8953442829 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 126 3.7E-69 T 14-10-2018 IPR010039 Capsule biosynthesis phosphatase VAB027_843 a713157c1ea3165360b69c8332b302f7 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.5E-80 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 PIRSF PIRSF000235 1 347 4.7E-194 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 SUPERFAMILY SSF51412 6 336 7.46E-100 T 14-10-2018 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.067 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.6E-184 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 SMART SM01240 7 344 2.6E-139 T 14-10-2018 VAB027_843 a713157c1ea3165360b69c8332b302f7 347 Gene3D G3DSA:3.20.20.70 1 345 1.2E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1457 54f35a892096a4eb54abc7505fe512e3 538 Pfam PF01593 Flavin containing amine oxidoreductase 214 268 2.3E-4 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VAB027_1457 54f35a892096a4eb54abc7505fe512e3 538 Gene3D G3DSA:3.50.50.60 85 304 6.6E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1457 54f35a892096a4eb54abc7505fe512e3 538 Gene3D G3DSA:3.50.50.60 470 533 1.1E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1457 54f35a892096a4eb54abc7505fe512e3 538 SUPERFAMILY SSF51905 100 529 5.83E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1457 54f35a892096a4eb54abc7505fe512e3 538 Gene3D G3DSA:3.30.70.2700 1 80 6.7E-30 T 14-10-2018 VAB027_1457 54f35a892096a4eb54abc7505fe512e3 538 PIRSF PIRSF038984 1 535 7.7E-240 T 14-10-2018 IPR028348 FAD dependent protein VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 Gene3D G3DSA:1.20.225.30 243 313 8.0E-24 T 14-10-2018 VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 PIRSF PIRSF006621 1 321 7.7E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 Pfam PF01207 Dihydrouridine synthase (Dus) 5 290 1.5E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 Gene3D G3DSA:3.20.20.70 1 242 2.6E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 SUPERFAMILY SSF51395 1 313 1.81E-73 T 14-10-2018 VAB027_1785 b957b4ed5147c7c3ee1ab0f31cb3be53 330 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 53.208 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 2.2E-156 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 SUPERFAMILY SSF102114 102 324 2.09E-24 T 14-10-2018 VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 Pfam PF13353 4Fe-4S single cluster domain 110 183 5.4E-7 T 14-10-2018 VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 Pfam PF04055 Radical SAM superfamily 118 280 2.6E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 5 328 4.1E-128 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 Gene3D G3DSA:3.20.20.70 51 334 9.8E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_233 9ba6566ba8dec0b99fdf02ec7c5b96e4 340 PIRSF PIRSF004911 5 340 1.6E-113 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VAB027_2193 9039ed04dbad4dbfa7cf8461844de562 293 SUPERFAMILY SSF161098 55 282 1.31E-42 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2193 9039ed04dbad4dbfa7cf8461844de562 293 Gene3D G3DSA:1.10.3720.10 51 292 3.4E-48 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2193 9039ed04dbad4dbfa7cf8461844de562 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 288 4.0E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 Gene3D G3DSA:2.40.50.140 200 282 7.4E-9 T 14-10-2018 VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 Pfam PF14743 DNA ligase OB-like domain 215 279 2.9E-28 T 14-10-2018 IPR029319 DNA ligase, OB-like domain VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 Pfam PF01068 ATP dependent DNA ligase domain 50 200 1.4E-6 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 Gene3D G3DSA:3.30.470.30 53 153 1.1E-52 T 14-10-2018 VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 SUPERFAMILY SSF56091 28 200 2.3E-36 T 14-10-2018 VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 SUPERFAMILY SSF50249 173 279 6.28E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2185 c6fc8f620cc4ffe6286b0a9d86845eab 282 Gene3D G3DSA:3.30.1490.70 33 192 1.1E-52 T 14-10-2018 VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 SUPERFAMILY SSF46548 571 685 1.15E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 7.0E-65 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 2.5E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 Pfam PF01565 FAD binding domain 52 192 3.3E-36 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 SUPERFAMILY SSF56176 20 277 1.16E-51 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 Gene3D G3DSA:3.30.465.40 16 210 9.4E-47 T 14-10-2018 VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_1876 e5baa1ae1ea80e16d5b6196e4f92ba00 1011 SUPERFAMILY SSF55103 252 538 6.7E-53 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 471 1.6E-45 T 14-10-2018 IPR000160 GGDEF domain VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 SMART SM00267 307 473 1.9E-52 T 14-10-2018 IPR000160 GGDEF domain VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 SUPERFAMILY SSF55073 323 471 4.16E-45 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 Gene3D G3DSA:3.30.70.270 308 472 4.6E-54 T 14-10-2018 VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 Pfam PF02743 Cache domain 40 270 1.1E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 Gene3D G3DSA:3.30.450.20 151 284 2.7E-7 T 14-10-2018 VAB027_2867 62fd7f05efb6bdf63591f12387a14f7c 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 469 1.5E-42 T 14-10-2018 IPR000160 GGDEF domain VAB027_1650 5d10fbdb7a56f98c5082fdd885aa79a7 367 Pfam PF02562 PhoH-like protein 120 323 1.3E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VAB027_1650 5d10fbdb7a56f98c5082fdd885aa79a7 367 SUPERFAMILY SSF52540 119 320 4.17E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1650 5d10fbdb7a56f98c5082fdd885aa79a7 367 Gene3D G3DSA:3.40.50.300 117 323 9.9E-74 T 14-10-2018 VAB027_1650 5d10fbdb7a56f98c5082fdd885aa79a7 367 SUPERFAMILY SSF54791 17 75 5.47E-5 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VAB027_238 c077845267892eefa45fc5d347bda35d 602 Gene3D G3DSA:1.20.58.100 423 538 3.1E-35 T 14-10-2018 VAB027_238 c077845267892eefa45fc5d347bda35d 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 SUPERFAMILY SSF56425 227 358 4.78E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.7E-38 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 SUPERFAMILY SSF51905 3 420 8.26E-72 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_238 c077845267892eefa45fc5d347bda35d 602 PIRSF PIRSF000171 1 574 3.2E-44 T 14-10-2018 VAB027_238 c077845267892eefa45fc5d347bda35d 602 SUPERFAMILY SSF46977 444 581 7.59E-44 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 Gene3D G3DSA:3.90.700.10 237 363 1.5E-160 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-9 T 14-10-2018 VAB027_238 c077845267892eefa45fc5d347bda35d 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.8E-9 T 14-10-2018 VAB027_238 c077845267892eefa45fc5d347bda35d 602 Pfam PF00890 FAD binding domain 7 397 2.7E-112 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 Gene3D G3DSA:3.50.50.60 7 409 1.5E-160 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_238 c077845267892eefa45fc5d347bda35d 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VAB027_238 c077845267892eefa45fc5d347bda35d 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.2E-236 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_238 c077845267892eefa45fc5d347bda35d 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 14-10-2018 VAB027_238 c077845267892eefa45fc5d347bda35d 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 14-10-2018 VAB027_238 c077845267892eefa45fc5d347bda35d 602 Gene3D G3DSA:4.10.80.40 543 577 2.2E-13 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 SMART SM00267 502 663 1.1E-24 T 14-10-2018 IPR000160 GGDEF domain VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Gene3D G3DSA:3.40.190.10 248 467 3.1E-27 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Gene3D G3DSA:3.40.190.10 25 110 4.0E-10 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 SUPERFAMILY SSF53850 251 465 1.66E-26 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 227 6.4E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 SUPERFAMILY SSF55073 518 656 6.98E-30 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 657 1.8E-28 T 14-10-2018 IPR000160 GGDEF domain VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Gene3D G3DSA:3.30.70.270 508 669 1.3E-34 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 445 2.2E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 SUPERFAMILY SSF53850 45 227 2.28E-24 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Gene3D G3DSA:3.40.190.10 337 435 3.1E-27 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Gene3D G3DSA:3.40.190.10 116 181 1.6E-7 T 14-10-2018 VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 513 656 9.4E-30 T 14-10-2018 IPR000160 GGDEF domain VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 SMART SM00062 250 497 1.5E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1751 2f251a9e9505c2cd5b9e08c70b9f8572 673 SMART SM00062 30 231 1.7E-11 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 Gene3D G3DSA:3.30.70.890 162 280 2.8E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 31.332 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 PIRSF PIRSF010376 4 280 3.6E-87 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 SUPERFAMILY SSF54211 6 157 7.59E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 Pfam PF08544 GHMP kinases C terminal 197 259 2.1E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 2.8E-94 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 SUPERFAMILY SSF55060 162 278 2.01E-36 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 4.5E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VAB027_2808 d614a9747eae520b3abbc3e1da14cd75 290 Gene3D G3DSA:3.30.230.10 2 160 6.7E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:3.30.2060.10 130 215 2.8E-120 T 14-10-2018 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Pfam PF00270 DEAD/DEAH box helicase 607 767 9.5E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1114 28.14 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SUPERFAMILY SSF52540 15 345 3.89E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SUPERFAMILY SSF52540 525 785 9.58E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Pfam PF03461 TRCF domain 1012 1102 1.6E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SMART SM00487 602 792 1.1E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Pfam PF00271 Helicase conserved C-terminal domain 809 911 2.5E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SUPERFAMILY SSF52540 351 467 8.23E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SUPERFAMILY SSF143517 1000 1149 3.92E-42 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SUPERFAMILY SSF141259 472 550 1.12E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:3.40.50.11140 355 453 1.6E-36 T 14-10-2018 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:3.90.1150.50 1006 1153 1.0E-44 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SUPERFAMILY SSF52540 784 992 7.92E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:3.40.50.300 544 783 3.6E-237 T 14-10-2018 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:2.30.30.840 485 543 3.6E-237 T 14-10-2018 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:3.40.50.11180 26 333 2.8E-120 T 14-10-2018 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SMART SM00982 1010 1110 2.3E-46 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SMART SM01058 481 578 9.2E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Pfam PF02559 CarD-like/TRCF domain 482 577 1.8E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1084 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 Gene3D G3DSA:3.40.50.300 480 992 3.6E-237 T 14-10-2018 VAB027_2530 55ec95adb094333e00d2fd5b3d7ae297 1155 SMART SM00490 828 912 3.2E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1294 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1294 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1294 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1294 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1294 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1294 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 14-10-2018 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 SUPERFAMILY SSF103025 8 284 9.89E-89 T 14-10-2018 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 258 2.1E-84 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 PIRSF PIRSF006487 1 376 5.2E-80 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 Gene3D G3DSA:3.30.1360.120 10 234 5.1E-82 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 Gene3D G3DSA:3.30.70.1400 59 142 5.1E-82 T 14-10-2018 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 SUPERFAMILY SSF101790 282 374 5.23E-26 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 Gene3D G3DSA:2.40.30.110 287 364 4.3E-28 T 14-10-2018 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 369 5.6E-108 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 Gene3D G3DSA:4.10.1250.10 236 284 5.7E-20 T 14-10-2018 VAB027_773 4108051f5c52ca1e5f524b1e75194f41 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 365 1.8E-22 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 2.4E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 Gene3D G3DSA:3.40.1770.10 22 544 7.8E-258 T 14-10-2018 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 Pfam PF17392 Urocanase C-terminal domain 354 548 7.4E-92 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.624 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.9E-293 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 Gene3D G3DSA:3.40.50.10730 147 351 7.8E-258 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 PIRSF PIRSF001423 1 563 1.7E-295 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 SUPERFAMILY SSF111326 11 557 1.57E-260 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1882 a8ea11392a2226b2832b18cb38a8f0f9 565 Pfam PF17391 Urocanase N-terminal domain 17 143 6.5E-63 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 Gene3D G3DSA:2.170.8.10 49 351 2.7E-235 T 14-10-2018 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 PIRSF PIRSF006294 4 541 1.1E-225 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 541 1.9E-277 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 Gene3D G3DSA:3.40.449.10 26 235 2.7E-235 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 SUPERFAMILY SSF68923 11 228 2.44E-87 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 Gene3D G3DSA:3.90.228.20 236 526 2.7E-235 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 3.0E-210 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 SUPERFAMILY SSF53795 230 541 4.12E-127 T 14-10-2018 VAB027_156 bf9bf09096c6d5d08d75923f493ddab8 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.356 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAB027_1864 81f775180f31c2bf8906927fea9252ba 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 426 7.2E-38 T 14-10-2018 IPR000160 GGDEF domain VAB027_1864 81f775180f31c2bf8906927fea9252ba 443 SUPERFAMILY SSF49785 40 211 1.19E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_1864 81f775180f31c2bf8906927fea9252ba 443 Gene3D G3DSA:3.30.70.270 260 431 3.8E-48 T 14-10-2018 VAB027_1864 81f775180f31c2bf8906927fea9252ba 443 SUPERFAMILY SSF55073 279 429 1.61E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1864 81f775180f31c2bf8906927fea9252ba 443 SMART SM00267 263 430 4.4E-49 T 14-10-2018 IPR000160 GGDEF domain VAB027_1864 81f775180f31c2bf8906927fea9252ba 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 429 4.7E-43 T 14-10-2018 IPR000160 GGDEF domain VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 SUPERFAMILY SSF54826 3 138 3.36E-56 T 14-10-2018 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 Pfam PF03952 Enolase, N-terminal domain 4 134 7.9E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 SUPERFAMILY SSF51604 144 428 4.53E-128 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 Hamap MF_00318 Enolase [eno]. 2 417 44.6 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 Gene3D G3DSA:3.30.390.10 3 127 2.1E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 145 430 5.6E-139 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.0E-207 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 Gene3D G3DSA:3.20.20.120 128 433 8.3E-134 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 SMART SM01192 143 431 5.8E-213 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 SMART SM01193 4 134 2.5E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3074 caeb8e9d4285cb03358569066bc035b4 433 PIRSF PIRSF001400 1 431 6.7E-193 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.8E-39 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 4.8E-39 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 4.8E-39 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 4.8E-39 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 325 4.8E-39 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 4.8E-39 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.30.9.50 74 263 2.6E-89 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 SUPERFAMILY SSF54373 180 265 4.71E-23 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 Pfam PF01494 FAD binding domain 6 339 6.3E-69 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.40.30.120 376 483 2.9E-12 T 14-10-2018 VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 SUPERFAMILY SSF51905 6 345 7.37E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2587 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.50.50.60 7 337 2.6E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.6E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 Gene3D G3DSA:1.10.10.10 1 74 7.0E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 SUPERFAMILY SSF55252 82 151 1.57E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.2E-41 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 SUPERFAMILY SSF46785 3 76 3.54E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.1E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 2.0E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 Gene3D G3DSA:3.30.1360.40 75 156 9.7E-33 T 14-10-2018 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 146 2.6E-20 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VAB027_3400 b4206259d854bae2c6a8fb02742c90d6 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.17 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Pfam PF00128 Alpha amylase, catalytic domain 276 348 3.3E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 SUPERFAMILY SSF81296 139 194 1.68E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 SUPERFAMILY SSF51011 624 726 8.81E-28 T 14-10-2018 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Gene3D G3DSA:2.60.40.10 7 221 3.7E-52 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 132 208 1.3E-19 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 629 726 1.9E-17 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 PIRSF PIRSF000463 10 729 1.9E-277 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 SUPERFAMILY SSF81296 22 103 5.95E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 SMART SM00642 251 618 3.8E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 723 5.7E-245 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 SUPERFAMILY SSF51445 180 617 3.1E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Gene3D G3DSA:2.60.40.1180 624 728 1.2E-29 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Gene3D G3DSA:3.20.20.80 225 623 5.7E-162 T 14-10-2018 VAB027_1006 58b6a244fbd44c42b87e01a0eb52f4e9 729 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 92 727 41.064 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VAB027_687 7b06fb347e1d440726547f591962bfcf 137 SUPERFAMILY SSF55729 14 125 7.57E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_687 7b06fb347e1d440726547f591962bfcf 137 Pfam PF13673 Acetyltransferase (GNAT) domain 34 125 4.3E-11 T 14-10-2018 IPR000182 GNAT domain VAB027_687 7b06fb347e1d440726547f591962bfcf 137 Gene3D G3DSA:3.40.630.30 7 133 1.5E-20 T 14-10-2018 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 328 337 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 SMART SM00448 3 114 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Pfam PF14532 Sigma-54 interaction domain 140 286 4.8E-15 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Gene3D G3DSA:3.40.50.300 137 286 1.1E-29 T 14-10-2018 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Gene3D G3DSA:3.40.50.2300 1 134 2.2E-33 T 14-10-2018 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 SUPERFAMILY SSF52540 138 344 8.04E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Gene3D G3DSA:1.10.10.60 357 414 1.8E-10 T 14-10-2018 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 SUPERFAMILY SSF52172 4 183 8.54E-36 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Pfam PF02954 Bacterial regulatory protein, Fis family 370 409 1.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Gene3D G3DSA:1.10.8.60 287 356 1.8E-17 T 14-10-2018 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 SUPERFAMILY SSF46689 359 412 7.62E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_474 3640e6881ac2277f1d8642cf7f0fa8ba 420 Pfam PF00072 Response regulator receiver domain 5 114 6.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Pfam PF01471 Putative peptidoglycan binding domain 731 773 3.3E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like VAB027_907 2bf0f63214040223f694de48e96542a9 1021 SUPERFAMILY SSF69279 6 191 3.34E-50 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 SUPERFAMILY SSF69255 369 456 2.62E-33 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 5.0E-71 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Gene3D G3DSA:1.10.101.10 716 805 2.8E-15 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 526 3.3E-183 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Gene3D G3DSA:3.30.1920.30 228 291 5.3E-82 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Gene3D G3DSA:2.30.110.50 14 336 5.3E-82 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 SUPERFAMILY SSF47090 724 800 2.16E-12 T 14-10-2018 IPR036365 PGBD-like superfamily VAB027_907 2bf0f63214040223f694de48e96542a9 1021 SUPERFAMILY SSF69279 197 370 5.1E-39 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 508 5.0E-131 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Pfam PF11860 N-acetylmuramidase 852 1018 5.4E-44 T 14-10-2018 IPR024408 N-acetylmuramidase VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Gene3D G3DSA:3.55.50.10 104 195 5.3E-82 T 14-10-2018 VAB027_907 2bf0f63214040223f694de48e96542a9 1021 Gene3D G3DSA:2.40.50.230 362 461 1.2E-41 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAB027_907 2bf0f63214040223f694de48e96542a9 1021 SUPERFAMILY SSF69349 447 628 3.37E-46 T 14-10-2018 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 Gene3D G3DSA:1.20.1330.10 44 326 2.2E-78 T 14-10-2018 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 Gene3D G3DSA:1.10.8.410 327 375 4.5E-21 T 14-10-2018 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 Gene3D G3DSA:3.30.70.2120 174 274 2.2E-78 T 14-10-2018 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 SUPERFAMILY SSF64518 1 375 1.23E-97 T 14-10-2018 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.8E-44 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 PRINTS PR00207 Flagellin signature 37 54 5.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 PRINTS PR00207 Flagellin signature 76 95 5.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 PRINTS PR00207 Flagellin signature 111 134 5.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 Pfam PF07196 Flagellin hook IN motif 193 247 4.5E-12 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAB027_2774 4c29e5238dc1ff16aaa7a077681adcf6 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 2.6E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Gene3D G3DSA:1.10.420.10 578 699 8.5E-154 T 14-10-2018 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Pfam PF00141 Peroxidase 406 698 6.1E-36 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Pfam PF00141 Peroxidase 70 397 6.6E-51 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Gene3D G3DSA:1.10.520.10 433 723 8.5E-154 T 14-10-2018 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.618 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 SUPERFAMILY SSF48113 19 430 8.1E-155 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 7.8E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 7.8E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 7.8E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 7.8E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 7.8E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Gene3D G3DSA:1.10.420.20 191 399 3.4E-220 T 14-10-2018 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 SUPERFAMILY SSF48113 432 723 5.8E-115 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 Gene3D G3DSA:1.10.520.10 21 432 3.4E-220 T 14-10-2018 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 6.0E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.0E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.0E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.0E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 6.0E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VAB027_2202 5e4bdaf0fccac095de6cb93147b020ff 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Gene3D G3DSA:3.30.1360.120 1 120 6.5E-40 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 SUPERFAMILY SSF52540 70 371 1.19E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.203 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 SUPERFAMILY SSF116878 120 453 2.62E-53 T 14-10-2018 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Pfam PF01926 50S ribosome-binding GTPase 217 308 2.4E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 6.8E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Gene3D G3DSA:1.20.120.430 121 453 1.8E-104 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Gene3D G3DSA:3.40.50.300 216 381 1.8E-104 T 14-10-2018 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 1.5E-102 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.2E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VAB027_3760 2944fd1621a6072b4aed3a08b88884d6 453 Pfam PF12631 MnmE helical domain 122 450 9.1E-63 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VAB027_506 db4a1b637e4929083b4b9c2bfc7b6b5d 157 Gene3D G3DSA:3.10.50.40 20 157 1.0E-52 T 14-10-2018 VAB027_506 db4a1b637e4929083b4b9c2bfc7b6b5d 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 6.5E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAB027_506 db4a1b637e4929083b4b9c2bfc7b6b5d 157 SUPERFAMILY SSF54534 17 156 2.27E-50 T 14-10-2018 VAB027_506 db4a1b637e4929083b4b9c2bfc7b6b5d 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 59 1.9E-9 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VAB027_144 b0962c3496e7677131c0f595401e2eca 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 568 3.7E-21 T 14-10-2018 IPR000160 GGDEF domain VAB027_144 b0962c3496e7677131c0f595401e2eca 843 SUPERFAMILY SSF158472 364 413 9.42E-5 T 14-10-2018 VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Gene3D G3DSA:3.30.70.270 423 587 2.9E-35 T 14-10-2018 VAB027_144 b0962c3496e7677131c0f595401e2eca 843 SMART SM00267 411 574 1.2E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Gene3D G3DSA:1.20.1480.50 326 422 1.1E-5 T 14-10-2018 VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 568 4.6E-28 T 14-10-2018 IPR000160 GGDEF domain VAB027_144 b0962c3496e7677131c0f595401e2eca 843 SUPERFAMILY SSF141868 591 838 1.7E-82 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Pfam PF02743 Cache domain 38 323 2.1E-17 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_144 b0962c3496e7677131c0f595401e2eca 843 SMART SM00052 584 832 2.0E-101 T 14-10-2018 IPR001633 EAL domain VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Gene3D G3DSA:3.20.20.450 588 842 7.0E-90 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Pfam PF00563 EAL domain 591 827 6.4E-72 T 14-10-2018 IPR001633 EAL domain VAB027_144 b0962c3496e7677131c0f595401e2eca 843 SUPERFAMILY SSF55073 427 569 5.65E-29 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_144 b0962c3496e7677131c0f595401e2eca 843 Gene3D G3DSA:3.30.450.20 36 227 6.4E-11 T 14-10-2018 VAB027_1167 1571a5d000ac6ae387f61d69be8df38f 192 SUPERFAMILY SSF51645 24 188 5.49E-17 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_1167 1571a5d000ac6ae387f61d69be8df38f 192 Gene3D G3DSA:2.170.170.11 18 134 3.3E-27 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Gene3D G3DSA:3.30.70.20 661 781 1.4E-29 T 14-10-2018 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 681 692 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 SMART SM00890 614 671 2.4E-14 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Gene3D G3DSA:3.40.920.10 416 619 3.4E-48 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 266 372 6.3E-16 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Pfam PF10371 Domain of unknown function 634 670 4.7E-11 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 244 1.1E-73 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 SUPERFAMILY SSF53323 416 659 1.7E-46 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 424 606 1.1E-23 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Gene3D G3DSA:3.40.50.970 784 1077 2.4E-107 T 14-10-2018 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 SUPERFAMILY SSF52518 5 255 3.73E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 929 1041 5.6E-11 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 SUPERFAMILY SSF52922 257 405 2.43E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 SUPERFAMILY SSF52518 788 1073 3.3E-88 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 SUPERFAMILY SSF54862 658 828 3.1E-18 T 14-10-2018 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Gene3D G3DSA:3.40.50.970 1 255 2.4E-101 T 14-10-2018 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Gene3D G3DSA:3.40.50.920 256 412 3.6E-50 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 4 1072 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 735 746 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_630 b44093ca65d9f1882637f71bda1e1a7d 1079 Pfam PF12838 4Fe-4S dicluster domain 681 747 1.8E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 SMART SM00448 1 116 5.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 SUPERFAMILY SSF52172 1 104 6.69E-26 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 PIRSF PIRSF000876 1 351 2.0E-112 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 Pfam PF01339 CheB methylesterase 163 327 5.1E-45 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 Gene3D G3DSA:3.40.50.180 154 345 1.5E-46 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 347 32.115 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 Pfam PF00072 Response regulator receiver domain 3 105 7.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 Gene3D G3DSA:3.40.50.2300 1 129 4.1E-28 T 14-10-2018 VAB027_2076 38a0458cd8e9e80097c41e8c88aa9c7a 358 SUPERFAMILY SSF52738 157 348 1.31E-48 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 Gene3D G3DSA:1.20.1480.50 141 232 4.5E-11 T 14-10-2018 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 530 1.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 Gene3D G3DSA:1.10.287.130 258 375 3.6E-15 T 14-10-2018 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 SMART SM00387 420 531 1.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 SMART SM00304 174 226 7.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 Gene3D G3DSA:3.30.565.10 392 533 9.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 SUPERFAMILY SSF55874 374 531 6.94E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 Pfam PF00672 HAMP domain 175 223 3.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1770 dd693be6ec9ac39cb107591aecc999cc 534 SUPERFAMILY SSF158472 176 223 1.44E-6 T 14-10-2018 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 179 195 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 297 1.8E-149 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 Pfam PF03462 PCRF domain 1 153 1.7E-48 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 SMART SM00937 19 129 4.8E-57 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 SUPERFAMILY SSF75620 1 298 1.96E-125 T 14-10-2018 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:3.30.70.1660 64 292 4.5E-96 T 14-10-2018 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 299 32.294 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:3.30.160.20 160 255 4.5E-96 T 14-10-2018 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:1.20.58.410 1 50 4.2E-11 T 14-10-2018 VAB027_3182 10fa683f53d364a1ec0d2fb92b47a115 299 Pfam PF00472 RF-1 domain 163 271 1.7E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 Gene3D G3DSA:1.10.10.10 3 93 4.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 Gene3D G3DSA:3.40.190.10 100 168 1.6E-7 T 14-10-2018 VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 Pfam PF03466 LysR substrate binding domain 97 288 4.5E-10 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 SUPERFAMILY SSF53850 90 288 3.94E-22 T 14-10-2018 VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 SUPERFAMILY SSF46785 2 85 2.83E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3170 a9b1038a38911a1c323e60a522f5c9e6 296 Gene3D G3DSA:3.40.190.10 169 265 1.6E-7 T 14-10-2018 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 Gene3D G3DSA:3.90.79.10 221 346 4.6E-15 T 14-10-2018 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 5.9E-132 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 Pfam PF00633 Helix-hairpin-helix motif 97 125 6.8E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 Pfam PF14815 NUDIX domain 231 343 1.1E-22 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 SMART SM00525 189 209 1.8E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 SMART SM00478 37 188 1.3E-48 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.1E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 Gene3D G3DSA:1.10.340.30 19 130 6.1E-88 T 14-10-2018 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 Gene3D G3DSA:1.10.1670.10 7 209 6.1E-88 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 SUPERFAMILY SSF48150 3 223 1.44E-76 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 SUPERFAMILY SSF55811 218 344 2.12E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_3371 001351f98e703c59da3f70465cd68d04 353 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 Gene3D G3DSA:3.40.50.720 1 216 6.9E-28 T 14-10-2018 VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 SUPERFAMILY SSF51735 1 186 5.44E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2685 b818c6c083d6474db3901dc43ae22bcd 223 Pfam PF00106 short chain dehydrogenase 7 186 1.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1975 8d8d81ae46868f06667989e1005558bf 120 PIRSF PIRSF006113 1 120 4.9E-53 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VAB027_1975 8d8d81ae46868f06667989e1005558bf 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.7E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VAB027_1975 8d8d81ae46868f06667989e1005558bf 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.3E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VAB027_1975 8d8d81ae46868f06667989e1005558bf 120 SUPERFAMILY SSF55620 1 119 2.0E-41 T 14-10-2018 VAB027_1975 8d8d81ae46868f06667989e1005558bf 120 Gene3D G3DSA:3.30.479.10 1 120 8.8E-50 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82714 732 816 1.19E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82714 194 274 1.44E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82866 821 1048 1.57E-44 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:3.30.70.1430 572 682 3.6E-234 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82866 303 504 1.09E-36 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82693 149 336 7.85E-13 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82693 568 682 1.88E-12 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:1.20.1640.10 21 516 3.6E-234 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:3.30.2090.10 189 280 3.6E-234 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 SUPERFAMILY SSF82693 47 136 1.99E-19 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:3.30.70.1430 47 829 3.6E-234 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 3.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 3.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 3.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 3.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 3.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Pfam PF00873 AcrB/AcrD/AcrF family 16 1044 1.1E-164 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:3.30.70.1440 683 892 3.6E-234 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:3.30.2090.10 731 821 3.6E-234 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:3.30.70.1320 143 338 3.6E-234 T 14-10-2018 VAB027_528 a203d34f767f51a8fea0e97196cf46ab 1052 Gene3D G3DSA:1.20.1640.10 517 1042 3.6E-234 T 14-10-2018 VAB027_3255 7a1a840195c380971ed3af5647222989 293 Gene3D G3DSA:3.40.50.620 1 179 1.2E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3255 7a1a840195c380971ed3af5647222989 293 Gene3D G3DSA:3.30.1300.10 181 283 8.1E-27 T 14-10-2018 VAB027_3255 7a1a840195c380971ed3af5647222989 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 6.2E-107 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VAB027_3255 7a1a840195c380971ed3af5647222989 293 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 1.5E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VAB027_3255 7a1a840195c380971ed3af5647222989 293 SUPERFAMILY SSF52374 1 281 9.38E-108 T 14-10-2018 VAB027_3255 7a1a840195c380971ed3af5647222989 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 4.2E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_3255 7a1a840195c380971ed3af5647222989 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.919 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VAB027_2799 5f45d1ae03ac422ca041ae8487c51bfa 160 PIRSF PIRSF006181 1 159 4.5E-55 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VAB027_2799 5f45d1ae03ac422ca041ae8487c51bfa 160 Pfam PF04073 Aminoacyl-tRNA editing domain 32 147 2.1E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VAB027_2799 5f45d1ae03ac422ca041ae8487c51bfa 160 Gene3D G3DSA:3.90.960.10 1 159 6.3E-61 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAB027_2799 5f45d1ae03ac422ca041ae8487c51bfa 160 SUPERFAMILY SSF55826 2 157 6.54E-46 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAB027_2799 5f45d1ae03ac422ca041ae8487c51bfa 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 3.8E-60 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 107 121 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 Gene3D G3DSA:3.40.50.1100 115 237 7.8E-194 T 14-10-2018 VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 11 437 1.6E-219 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 396 7.8E-56 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 SUPERFAMILY SSF53686 97 437 3.7E-50 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 Gene3D G3DSA:3.40.50.1100 22 437 7.8E-194 T 14-10-2018 VAB027_314 eac6d269be571d0960ba1ba777a8339b 440 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 440 264.783 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 SUPERFAMILY SSF141868 353 595 6.28E-68 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 Gene3D G3DSA:3.30.70.270 163 345 1.0E-34 T 14-10-2018 VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 SMART SM00052 341 588 1.8E-65 T 14-10-2018 IPR001633 EAL domain VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 Gene3D G3DSA:3.20.20.450 346 595 7.6E-70 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 SMART SM00267 156 331 5.4E-24 T 14-10-2018 IPR000160 GGDEF domain VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 Pfam PF00563 EAL domain 348 583 6.9E-58 T 14-10-2018 IPR001633 EAL domain VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 324 1.0E-27 T 14-10-2018 IPR000160 GGDEF domain VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 SUPERFAMILY SSF55073 172 332 1.49E-27 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2576 26ef95ca9a2bc6188980f79212c28cfd 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 330 3.6E-24 T 14-10-2018 IPR000160 GGDEF domain VAB027_965 ad52a574a5099ab6b300c99731d3b927 82 SUPERFAMILY SSF58042 27 81 3.27E-16 T 14-10-2018 VAB027_965 ad52a574a5099ab6b300c99731d3b927 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 2.6E-23 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VAB027_965 ad52a574a5099ab6b300c99731d3b927 82 PIRSF PIRSF002855 1 82 7.6E-36 T 14-10-2018 IPR016367 Murein-lipoprotein VAB027_965 ad52a574a5099ab6b300c99731d3b927 82 Gene3D G3DSA:1.20.5.190 26 81 1.1E-12 T 14-10-2018 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF109736 156 220 4.58E-21 T 14-10-2018 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.5E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 6.5E-15 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF55326 619 816 9.42E-70 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Gene3D G3DSA:3.90.650.10 810 982 4.2E-30 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF56042 826 1035 4.34E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF55326 221 428 1.99E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Gene3D G3DSA:3.30.1330.10 615 809 5.6E-26 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Gene3D G3DSA:1.10.8.750 153 213 2.0E-27 T 14-10-2018 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.378 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Gene3D G3DSA:3.40.50.880 983 1297 6.9E-139 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Gene3D G3DSA:3.90.650.10 420 606 4.1E-58 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF82697 1 151 2.88E-52 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF56042 432 615 4.78E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SUPERFAMILY SSF52317 1037 1296 4.98E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1296 1.9E-108 T 14-10-2018 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 SMART SM01211 1041 1296 5.5E-159 T 14-10-2018 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_1509 937013a04b5c84e7d4b714e522173df3 1297 Gene3D G3DSA:3.30.1330.10 214 419 2.0E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_3529 e9789d116e5645d0c5bace0e929305de 140 SUPERFAMILY SSF55729 3 114 3.78E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3529 e9789d116e5645d0c5bace0e929305de 140 Pfam PF13508 Acetyltransferase (GNAT) domain 31 106 2.0E-9 T 14-10-2018 IPR000182 GNAT domain VAB027_3529 e9789d116e5645d0c5bace0e929305de 140 Gene3D G3DSA:3.40.630.30 12 131 7.2E-11 T 14-10-2018 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Gene3D G3DSA:3.40.50.620 314 555 4.3E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Gene3D G3DSA:1.10.730.10 577 819 1.5E-69 T 14-10-2018 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Gene3D G3DSA:3.40.50.620 2 203 4.2E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 SUPERFAMILY SSF52374 1 641 5.23E-137 T 14-10-2018 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Gene3D G3DSA:3.90.740.10 205 240 6.9E-6 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.0E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 SUPERFAMILY SSF47323 642 900 9.35E-68 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 951 16.044 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 SUPERFAMILY SSF50677 190 365 6.93E-60 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 SUPERFAMILY SSF46589 886 950 8.89E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.0E-224 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Pfam PF08264 Anticodon-binding domain of tRNA 675 827 2.0E-39 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Gene3D G3DSA:1.10.287.380 879 951 1.3E-18 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Gene3D G3DSA:3.90.740.10 241 295 7.1E-6 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_1361 732182be7cededcbfff39cb7a6e1fa1c 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 946 3.7E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VAB027_1227 809f7b83345b6ec508b44df55f8a547d 422 Gene3D G3DSA:3.90.1150.10 289 422 3.8E-53 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1227 809f7b83345b6ec508b44df55f8a547d 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.3E-196 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 VAB027_1227 809f7b83345b6ec508b44df55f8a547d 422 PIRSF PIRSF001434 1 422 7.2E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_1227 809f7b83345b6ec508b44df55f8a547d 422 SUPERFAMILY SSF53383 1 421 1.29E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1227 809f7b83345b6ec508b44df55f8a547d 422 Gene3D G3DSA:3.40.640.10 1 285 5.9E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1227 809f7b83345b6ec508b44df55f8a547d 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 3.9E-137 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 7.4E-107 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 SUPERFAMILY SSF55681 92 327 1.75E-82 T 14-10-2018 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.0E-25 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 8.6E-114 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.501 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 SUPERFAMILY SSF46589 13 99 1.26E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VAB027_1902 a9003c7dce9f3a319c6147a04e238124 327 Gene3D G3DSA:3.30.930.10 7 327 7.8E-127 T 14-10-2018 VAB027_2243 6dc0c5aa6bf76112c8cd8cbbb6f8c511 253 Gene3D G3DSA:3.40.190.10 56 248 9.3E-18 T 14-10-2018 VAB027_2243 6dc0c5aa6bf76112c8cd8cbbb6f8c511 253 Gene3D G3DSA:3.40.190.10 118 220 9.3E-18 T 14-10-2018 VAB027_2243 6dc0c5aa6bf76112c8cd8cbbb6f8c511 253 SUPERFAMILY SSF53850 38 248 1.19E-29 T 14-10-2018 VAB027_2243 6dc0c5aa6bf76112c8cd8cbbb6f8c511 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 230 9.3E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 TIGRFAM TIGR00277 HDIG: HDIG domain 242 289 8.9E-8 T 14-10-2018 IPR006675 HDIG domain VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 Gene3D G3DSA:1.10.3210.10 15 195 3.9E-19 T 14-10-2018 VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 Gene3D G3DSA:1.10.3210.10 224 414 3.4E-54 T 14-10-2018 VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 SUPERFAMILY SSF109604 16 189 5.45E-17 T 14-10-2018 VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 Pfam PF01966 HD domain 33 144 2.9E-5 T 14-10-2018 IPR006674 HD domain VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 Pfam PF01966 HD domain 244 365 1.2E-18 T 14-10-2018 IPR006674 HD domain VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 SMART SM00471 26 155 5.5 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 SMART SM00471 240 375 8.3E-9 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_487 5602877907379605fc0f0c7a78ccdcff 422 SUPERFAMILY SSF109604 236 396 3.38E-31 T 14-10-2018 VAB027_1652 546b2aa8781b8857064a005130248a61 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 8.0E-21 T 14-10-2018 VAB027_1652 546b2aa8781b8857064a005130248a61 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 8.0E-21 T 14-10-2018 VAB027_1652 546b2aa8781b8857064a005130248a61 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 8.0E-21 T 14-10-2018 VAB027_1652 546b2aa8781b8857064a005130248a61 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.0E-21 T 14-10-2018 VAB027_1652 546b2aa8781b8857064a005130248a61 387 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 384 3.4E-117 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VAB027_1652 546b2aa8781b8857064a005130248a61 387 Pfam PF01494 FAD binding domain 6 313 7.7E-28 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VAB027_1652 546b2aa8781b8857064a005130248a61 387 SUPERFAMILY SSF51905 5 378 1.05E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1652 546b2aa8781b8857064a005130248a61 387 Gene3D G3DSA:3.50.50.60 7 332 8.4E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1652 546b2aa8781b8857064a005130248a61 387 Gene3D G3DSA:3.30.9.50 82 269 8.4E-101 T 14-10-2018 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.0E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 Gene3D G3DSA:1.10.8.50 1 71 4.6E-27 T 14-10-2018 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.977 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 PIRSF PIRSF002134 1 118 2.3E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 SUPERFAMILY SSF46946 2 114 3.68E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.4E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1295 9e39e2df7f54c6cba7a37a876bbb32f9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_593 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_593 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_593 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_593 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_1899 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_1899 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_1899 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_1899 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_1967 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_1967 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_1967 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_1967 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_1137 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_1137 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_1137 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_1137 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_2796 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_2796 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_2796 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_2796 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_134 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_134 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_134 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VAB027_134 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 3 137 2.8E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VAB027_417 d9dea3595acab01b1b314f7e832a1b68 247 Pfam PF00005 ABC transporter 23 175 1.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_417 d9dea3595acab01b1b314f7e832a1b68 247 Gene3D G3DSA:3.40.50.300 3 247 1.3E-72 T 14-10-2018 VAB027_417 d9dea3595acab01b1b314f7e832a1b68 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_417 d9dea3595acab01b1b314f7e832a1b68 247 SMART SM00382 32 223 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_417 d9dea3595acab01b1b314f7e832a1b68 247 SUPERFAMILY SSF52540 8 240 4.28E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_417 d9dea3595acab01b1b314f7e832a1b68 247 PIRSF PIRSF039085 4 247 4.1E-89 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAB027_3098 d6b4e0efafa25c9ffb8d47d1bde7647e 68 Gene3D G3DSA:3.30.1910.10 1 63 4.1E-30 T 14-10-2018 VAB027_3098 d6b4e0efafa25c9ffb8d47d1bde7647e 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-30 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VAB027_3098 d6b4e0efafa25c9ffb8d47d1bde7647e 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.2E-28 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 Gene3D G3DSA:3.40.50.720 1 248 2.5E-83 T 14-10-2018 VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 0.0028 T 14-10-2018 VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 SUPERFAMILY SSF51735 6 244 5.51E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2236 3be1815305ad0e0cb6868c13d2c95c77 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.0E-71 T 14-10-2018 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Hamap MF_01628 Thymidine phosphorylase [deoA]. 8 443 45.795 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 SMART SM00941 356 430 1.3E-27 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 SUPERFAMILY SSF47648 10 76 2.49E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 11 429 2.3E-160 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 356 429 2.2E-23 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Gene3D G3DSA:3.40.1030.10 76 328 3.8E-127 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Pfam PF00591 Glycosyl transferase family, a/b domain 86 315 2.0E-48 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 119 134 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 9 432 2.0E-214 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Gene3D G3DSA:3.90.1170.30 343 437 2.0E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 PIRSF PIRSF000478 8 443 1.5E-150 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 73 1.2E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 Gene3D G3DSA:1.20.970.10 13 201 3.8E-127 T 14-10-2018 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 SUPERFAMILY SSF54680 343 441 8.24E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2980 089a7376da59ce2258f161bdf7e04858 448 SUPERFAMILY SSF52418 79 339 4.45E-88 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Gene3D G3DSA:3.10.150.10 1 122 3.1E-41 T 14-10-2018 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.4E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SUPERFAMILY SSF55979 245 366 1.09E-36 T 14-10-2018 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SMART SM00480 17 362 8.0E-140 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Gene3D G3DSA:3.10.150.10 248 366 3.3E-39 T 14-10-2018 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 PIRSF PIRSF000804 1 366 1.1E-117 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 6.6E-34 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Gene3D G3DSA:3.10.150.10 124 247 1.0E-34 T 14-10-2018 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.9E-37 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SUPERFAMILY SSF55979 1 118 1.41E-28 T 14-10-2018 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.4E-107 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VAB027_2 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SUPERFAMILY SSF55979 126 244 1.51E-27 T 14-10-2018 VAB027_442 24e788274673c27b1cd626c18b9f099c 221 SUPERFAMILY SSF141371 12 115 4.71E-25 T 14-10-2018 VAB027_442 24e788274673c27b1cd626c18b9f099c 221 Pfam PF07238 PilZ domain 115 208 9.5E-16 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VAB027_442 24e788274673c27b1cd626c18b9f099c 221 Gene3D G3DSA:2.30.110.10 5 115 1.2E-9 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAB027_442 24e788274673c27b1cd626c18b9f099c 221 Gene3D G3DSA:2.40.10.220 116 214 1.1E-7 T 14-10-2018 VAB027_442 24e788274673c27b1cd626c18b9f099c 221 Pfam PF12945 Flagellar protein YcgR 16 106 1.3E-8 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VAB027_442 24e788274673c27b1cd626c18b9f099c 221 SUPERFAMILY SSF141371 117 219 2.75E-18 T 14-10-2018 VAB027_2781 19fdc30052889302d372e563d46c93ee 115 SUPERFAMILY SSF52833 2 114 1.41E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_2781 19fdc30052889302d372e563d46c93ee 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 9.2E-32 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VAB027_2781 19fdc30052889302d372e563d46c93ee 115 Gene3D G3DSA:3.40.30.10 2 115 4.5E-43 T 14-10-2018 VAB027_2781 19fdc30052889302d372e563d46c93ee 115 Pfam PF03960 ArsC family 6 112 4.2E-19 T 14-10-2018 IPR006660 Arsenate reductase-like VAB027_3254 40f6d28e00ca9e2c1dd802788b85e083 264 SUPERFAMILY SSF51621 3 262 4.71E-105 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_3254 40f6d28e00ca9e2c1dd802788b85e083 264 PIRSF PIRSF000388 1 264 3.4E-101 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAB027_3254 40f6d28e00ca9e2c1dd802788b85e083 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.41 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAB027_3254 40f6d28e00ca9e2c1dd802788b85e083 264 Gene3D G3DSA:3.20.20.60 1 262 6.9E-106 T 14-10-2018 VAB027_3254 40f6d28e00ca9e2c1dd802788b85e083 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 261 6.5E-113 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAB027_3254 40f6d28e00ca9e2c1dd802788b85e083 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 4.1E-108 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 SUPERFAMILY SSF81301 36 172 1.04E-18 T 14-10-2018 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 Pfam PF01966 HD domain 451 584 4.5E-14 T 14-10-2018 IPR006674 HD domain VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 SMART SM00471 447 594 1.3E-10 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 PIRSF PIRSF006288 6 875 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 SUPERFAMILY SSF55021 689 762 3.02E-7 T 14-10-2018 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 1.3E-34 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 SUPERFAMILY SSF81593 182 310 1.02E-9 T 14-10-2018 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 SUPERFAMILY SSF55021 796 854 1.03E-7 T 14-10-2018 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 869 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 876 334.862 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 SUPERFAMILY SSF109604 418 553 1.1E-14 T 14-10-2018 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 Gene3D G3DSA:1.10.3210.10 435 584 1.4E-9 T 14-10-2018 VAB027_2903 f156ca846cdca4caa717bf05a21802f6 876 Pfam PF01909 Nucleotidyltransferase domain 57 109 1.1E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VAB027_1493 c158802295aa6fb2607e2f048ce833e0 119 Gene3D G3DSA:3.30.1450.10 34 113 7.6E-24 T 14-10-2018 IPR037873 BamE-like VAB027_1493 c158802295aa6fb2607e2f048ce833e0 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 34.478 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE VAB027_1493 c158802295aa6fb2607e2f048ce833e0 119 Pfam PF04355 SmpA / OmlA family 35 104 9.0E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VAB027_1482 e623a17d81e537e69105cd9823aa6f5b 503 Gene3D G3DSA:3.90.220.20 43 235 1.9E-25 T 14-10-2018 VAB027_1482 e623a17d81e537e69105cd9823aa6f5b 503 Gene3D G3DSA:3.90.220.20 283 452 3.5E-23 T 14-10-2018 VAB027_1482 e623a17d81e537e69105cd9823aa6f5b 503 SUPERFAMILY SSF116734 284 467 1.23E-12 T 14-10-2018 VAB027_1482 e623a17d81e537e69105cd9823aa6f5b 503 SUPERFAMILY SSF116734 51 222 8.83E-23 T 14-10-2018 VAB027_1482 e623a17d81e537e69105cd9823aa6f5b 503 Pfam PF01420 Type I restriction modification DNA specificity domain 67 206 5.3E-8 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAB027_1482 e623a17d81e537e69105cd9823aa6f5b 503 Gene3D G3DSA:3.90.220.20 453 473 3.5E-23 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 6.8E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:2.40.50.100 948 1021 2.7E-25 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:2.40.50.100 1022 1126 3.6E-30 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.0E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.969 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 SUPERFAMILY SSF64484 16 1362 0.0 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:1.10.1790.20 1135 1313 1.4E-63 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:1.10.274.100 490 640 1.1E-40 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 SMART SM00663 235 514 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:1.10.132.30 641 790 1.9E-65 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:2.40.50.100 1151 1214 1.4E-63 T 14-10-2018 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.2E-76 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.8E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3513 629130a4bf41957531fb76d1a9717368 1401 Gene3D G3DSA:1.10.150.390 1315 1377 1.1E-28 T 14-10-2018 VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 SUPERFAMILY SSF51735 103 299 4.29E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 SUPERFAMILY SSF52283 1 136 3.19E-40 T 14-10-2018 VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 Gene3D G3DSA:3.40.50.720 4 317 7.3E-130 T 14-10-2018 VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 8.4E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 7.6E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 Gene3D G3DSA:3.40.50.720 103 298 7.3E-130 T 14-10-2018 VAB027_848 4bd78ff230168e0b8c92b4c27da0590c 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 SUPERFAMILY SSF58104 318 627 2.35E-77 T 14-10-2018 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 Gene3D G3DSA:1.10.287.950 296 627 8.0E-72 T 14-10-2018 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 Gene3D G3DSA:3.30.450.20 60 168 8.4E-57 T 14-10-2018 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 SMART SM00304 353 403 7.8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 SMART SM00304 296 350 9.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 SMART SM00283 365 626 9.8E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 SUPERFAMILY SSF103190 89 173 1.02E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 592 3.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 Pfam PF00672 HAMP domain 300 346 1.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 1.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 1.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 1.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 Gene3D G3DSA:3.30.450.20 47 270 8.4E-57 T 14-10-2018 VAB027_1965 343cfeec9e2f9a2f6b7bd22fdbd10011 627 Pfam PF02743 Cache domain 38 258 1.8E-27 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 Gene3D G3DSA:3.40.50.300 1 166 1.2E-28 T 14-10-2018 VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 Pfam PF00271 Helicase conserved C-terminal domain 239 342 2.7E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 SUPERFAMILY SSF57829 425 465 2.01E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 SUPERFAMILY SSF52540 49 362 2.12E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.9E-23 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 SMART SM00487 1 178 2.6E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 SMART SM00490 265 344 6.0E-12 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2283 2f2be5bcaca8178903b0b99b9391a254 594 Gene3D G3DSA:3.40.50.300 207 367 6.8E-33 T 14-10-2018 VAB027_3137 a64561ec737c245f384f165728735a74 124 SUPERFAMILY SSF46689 34 122 3.31E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3137 a64561ec737c245f384f165728735a74 124 Gene3D G3DSA:1.10.10.60 85 124 3.4E-6 T 14-10-2018 VAB027_3137 a64561ec737c245f384f165728735a74 124 Pfam PF08765 Mor transcription activator family 35 121 4.0E-12 T 14-10-2018 IPR014875 Mor transcription activator VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 Gene3D G3DSA:3.10.290.10 6 75 2.9E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 Gene3D G3DSA:3.30.2350.10 95 315 7.3E-80 T 14-10-2018 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 Pfam PF00849 RNA pseudouridylate synthase 103 248 1.7E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 SMART SM00363 20 80 3.6E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 SUPERFAMILY SSF55174 19 71 6.18E-9 T 14-10-2018 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 SUPERFAMILY SSF55120 97 312 1.22E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 9.4E-92 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2665 e7179081e306a0b4f1fd7dd1e389ba8c 315 Pfam PF01479 S4 domain 20 66 9.6E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1764 017e94737faefe9a1cd90857b655556b 121 Pfam PF00072 Response regulator receiver domain 7 115 6.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1764 017e94737faefe9a1cd90857b655556b 121 Gene3D G3DSA:3.40.50.2300 1 119 5.8E-26 T 14-10-2018 VAB027_1764 017e94737faefe9a1cd90857b655556b 121 SMART SM00448 3 115 1.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1764 017e94737faefe9a1cd90857b655556b 121 SUPERFAMILY SSF52172 4 118 1.11E-26 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2892 7ccb68477566e45699de18475aef0de5 166 Gene3D G3DSA:3.30.910.20 22 166 4.0E-36 T 14-10-2018 IPR024930 Skp domain superfamily VAB027_2892 7ccb68477566e45699de18475aef0de5 166 SMART SM00935 12 166 5.1E-43 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VAB027_2892 7ccb68477566e45699de18475aef0de5 166 SUPERFAMILY SSF111384 23 165 1.27E-31 T 14-10-2018 VAB027_2892 7ccb68477566e45699de18475aef0de5 166 PIRSF PIRSF002094 1 166 8.4E-40 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VAB027_2892 7ccb68477566e45699de18475aef0de5 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 1.4E-25 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 PIRSF PIRSF000370 1 222 1.8E-70 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 Pfam PF13394 4Fe-4S single cluster domain 23 135 1.7E-12 T 14-10-2018 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 222 2.9E-113 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 Gene3D G3DSA:3.20.20.70 1 222 1.7E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 SUPERFAMILY SSF102114 24 120 1.23E-6 T 14-10-2018 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 Pfam PF04055 Radical SAM superfamily 25 122 2.6E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_2041 2bfd335abdf101d0ad10e063bf9f9273 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 35.389 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SUPERFAMILY SSF55874 333 506 1.83E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Pfam PF01627 Hpt domain 824 910 1.6E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SMART SM00448 654 767 7.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SMART SM00388 279 344 2.5E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SUPERFAMILY SSF52172 521 634 1.42E-6 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SMART SM00073 818 912 0.0099 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SUPERFAMILY SSF47384 264 345 1.47E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 506 1.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SUPERFAMILY SSF52172 654 775 1.35E-36 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SUPERFAMILY SSF47226 750 907 1.01E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Gene3D G3DSA:3.40.50.2300 655 784 5.9E-39 T 14-10-2018 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Pfam PF00072 Response regulator receiver domain 656 765 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Gene3D G3DSA:1.20.120.160 802 916 7.5E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 21 164 2.7E-52 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SUPERFAMILY SSF158472 189 236 8.37E-7 T 14-10-2018 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Gene3D G3DSA:1.20.1480.50 153 259 6.0E-8 T 14-10-2018 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 344 1.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SMART SM00304 187 239 6.2E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Gene3D G3DSA:3.30.565.10 346 509 9.8E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 SMART SM00387 391 507 1.4E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3080 fe261428009dafcec28cf7ad123f8298 916 Gene3D G3DSA:1.10.287.130 266 345 9.8E-27 T 14-10-2018 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 SMART SM00382 32 231 4.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 SMART SM00382 338 534 2.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 562 0.0014 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 9.0E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 SUPERFAMILY SSF52540 303 553 1.36E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 Pfam PF00005 ABC transporter 24 181 6.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 SUPERFAMILY SSF52540 3 253 1.03E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 Pfam PF00005 ABC transporter 330 483 1.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 Gene3D G3DSA:3.40.50.300 300 570 5.2E-86 T 14-10-2018 VAB027_3687 e0dc2b9706f5114c9bc33075d7867557 571 Gene3D G3DSA:3.40.50.300 1 293 9.1E-86 T 14-10-2018 VAB027_482 b5366d672c8115fdff053dd25086d437 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.4E-63 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAB027_482 b5366d672c8115fdff053dd25086d437 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 287 21.44 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAB027_482 b5366d672c8115fdff053dd25086d437 300 Pfam PF07549 SecD/SecF GG Motif 30 47 1.3E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAB027_482 b5366d672c8115fdff053dd25086d437 300 SUPERFAMILY SSF82866 109 284 2.35E-33 T 14-10-2018 VAB027_482 b5366d672c8115fdff053dd25086d437 300 Gene3D G3DSA:1.20.1640.10 95 290 3.7E-10 T 14-10-2018 VAB027_482 b5366d672c8115fdff053dd25086d437 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 68 274 1.5E-47 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_482 b5366d672c8115fdff053dd25086d437 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 3.4E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_482 b5366d672c8115fdff053dd25086d437 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 3.4E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_482 b5366d672c8115fdff053dd25086d437 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 3.4E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_482 b5366d672c8115fdff053dd25086d437 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 3.4E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_482 b5366d672c8115fdff053dd25086d437 300 Pfam PF02355 Protein export membrane protein 101 283 2.0E-54 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAB027_498 153a43db07f938b0f661414f2d0ec0e5 338 Gene3D G3DSA:3.10.450.50 5 150 6.5E-22 T 14-10-2018 VAB027_498 153a43db07f938b0f661414f2d0ec0e5 338 Gene3D G3DSA:3.10.450.50 204 332 2.3E-12 T 14-10-2018 VAB027_498 153a43db07f938b0f661414f2d0ec0e5 338 SUPERFAMILY SSF54427 185 328 2.15E-17 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_498 153a43db07f938b0f661414f2d0ec0e5 338 SUPERFAMILY SSF54427 5 153 6.27E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_498 153a43db07f938b0f661414f2d0ec0e5 338 Pfam PF12680 SnoaL-like domain 11 131 2.7E-8 T 14-10-2018 IPR037401 SnoaL-like domain VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Gene3D G3DSA:3.40.1190.10 81 312 2.0E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 2.7E-148 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 SUPERFAMILY SSF53623 100 311 3.27E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Gene3D G3DSA:3.90.190.20 313 453 1.3E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.051 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 SUPERFAMILY SSF63418 1 95 1.7E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 SUPERFAMILY SSF53244 314 448 4.81E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Gene3D G3DSA:3.40.1390.10 1 80 1.4E-25 T 14-10-2018 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 393 2.3E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Pfam PF01225 Mur ligase family, catalytic domain 24 72 4.9E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAB027_3032 38ab25536531d2b1dcc46782a11d8793 453 Pfam PF08245 Mur ligase middle domain 105 293 9.9E-47 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 SMART SM00421 152 209 7.8E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 Gene3D G3DSA:3.40.50.2300 12 143 3.4E-20 T 14-10-2018 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 Gene3D G3DSA:1.10.10.10 145 214 2.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3435 09f3c744723396849ea50bb51be271e6 214 SUPERFAMILY SSF46894 140 211 7.82E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 3.6E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3435 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1203 4d4cc67e4045bcacd86a2ebc01ef5099 343 Pfam PF01032 FecCD transport family 19 336 3.6E-91 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_1203 4d4cc67e4045bcacd86a2ebc01ef5099 343 SUPERFAMILY SSF81345 5 337 1.44E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1203 4d4cc67e4045bcacd86a2ebc01ef5099 343 Gene3D G3DSA:1.10.3470.10 3 342 1.1E-104 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 SMART SM00852 380 517 1.2E-41 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Gene3D G3DSA:3.90.105.10 226 374 2.9E-138 T 14-10-2018 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 SUPERFAMILY SSF53218 377 522 1.05E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 SUPERFAMILY SSF52540 15 175 2.0E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Gene3D G3DSA:2.40.340.10 527 597 2.9E-138 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Gene3D G3DSA:2.20.25.120 60 92 4.8E-57 T 14-10-2018 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Pfam PF00994 Probable molybdopterin binding domain 380 517 1.5E-27 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 17 149 2.5E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 SUPERFAMILY SSF63867 526 604 1.57E-21 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Gene3D G3DSA:2.170.190.11 250 341 2.9E-138 T 14-10-2018 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Pfam PF03454 MoeA C-terminal region (domain IV) 531 602 3.5E-20 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 SUPERFAMILY SSF63882 205 375 2.35E-49 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 17 172 1.4E-42 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 377 513 2.6E-33 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 PIRSF PIRSF036618 2 606 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Pfam PF03453 MoeA N-terminal region (domain I and II) 208 367 5.8E-42 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 453 486 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Gene3D G3DSA:3.40.50.300 17 171 4.8E-57 T 14-10-2018 VAB027_2173 04419b380b1d1b39986ef06774143bbf 606 Gene3D G3DSA:3.40.980.10 225 526 2.9E-138 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_561 c34330d2029aa5540c925702f4709dea 335 Gene3D G3DSA:3.40.190.10 29 296 1.4E-77 T 14-10-2018 VAB027_561 c34330d2029aa5540c925702f4709dea 335 Gene3D G3DSA:3.40.190.10 132 309 1.4E-77 T 14-10-2018 VAB027_561 c34330d2029aa5540c925702f4709dea 335 PIRSF PIRSF002825 9 328 2.8E-76 T 14-10-2018 IPR026045 Ferric binding protein VAB027_561 c34330d2029aa5540c925702f4709dea 335 SUPERFAMILY SSF53850 23 325 6.04E-61 T 14-10-2018 VAB027_561 c34330d2029aa5540c925702f4709dea 335 Pfam PF13343 Bacterial extracellular solute-binding protein 74 296 8.2E-25 T 14-10-2018 VAB027_561 c34330d2029aa5540c925702f4709dea 335 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 7 332 3.8E-151 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 SUPERFAMILY SSF52172 193 319 2.7E-28 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 SMART SM00448 193 318 8.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 Pfam PF00072 Response regulator receiver domain 195 316 1.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 Gene3D G3DSA:2.30.30.40 36 154 1.6E-29 T 14-10-2018 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 Pfam PF01584 CheW-like domain 37 162 1.8E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 Gene3D G3DSA:3.40.50.2300 188 324 2.7E-29 T 14-10-2018 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 Gene3D G3DSA:2.40.50.180 44 160 1.6E-29 T 14-10-2018 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 SUPERFAMILY SSF50341 7 165 4.45E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 SMART SM00260 14 160 9.6E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2249 60f6d7369df304e8d140ca730a36803c 325 PIRSF PIRSF002867 1 325 5.4E-102 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 Gene3D G3DSA:2.40.50.140 1 65 9.2E-26 T 14-10-2018 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.4E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 SMART SM00357 3 67 4.2E-26 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 PIRSF PIRSF002599 1 73 2.2E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 SUPERFAMILY SSF50249 1 67 3.21E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1823 9e856c6f65065d419c9b7fcc7d90e065 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.2E-43 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 Pfam PF00035 Double-stranded RNA binding motif 151 218 5.0E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 Gene3D G3DSA:3.30.160.20 149 220 4.8E-20 T 14-10-2018 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 Pfam PF14622 Ribonuclease-III-like 15 135 7.8E-35 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 ProSitePatterns PS00517 Ribonuclease III family signature. 33 41 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 SUPERFAMILY SSF54768 104 218 3.61E-29 T 14-10-2018 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 5 218 6.6E-76 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 SMART SM00535 16 144 1.2E-58 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 SMART SM00358 151 219 3.1E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 Hamap MF_00104 Ribonuclease 3 [rnc]. 4 215 30.386 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 Gene3D G3DSA:1.10.1520.10 1 142 1.9E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VAB027_3087 f0ff012f50c2efca17057ad3a77b06ce 221 SUPERFAMILY SSF69065 3 154 3.84E-51 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VAB027_1024 5cbd4d12abf995bef8e867edaf1f3693 507 Gene3D G3DSA:3.40.50.12780 4 374 1.4E-67 T 14-10-2018 VAB027_1024 5cbd4d12abf995bef8e867edaf1f3693 507 Pfam PF00501 AMP-binding enzyme 9 381 1.3E-55 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_1024 5cbd4d12abf995bef8e867edaf1f3693 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_1024 5cbd4d12abf995bef8e867edaf1f3693 507 SUPERFAMILY SSF56801 3 472 2.22E-78 T 14-10-2018 VAB027_3587 c568c6eaf465a2cdbbedd95a1110a287 184 Pfam PF02397 Bacterial sugar transferase 3 173 8.2E-50 T 14-10-2018 IPR003362 Bacterial sugar transferase VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 Pfam PF00753 Metallo-beta-lactamase superfamily 499 678 2.4E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 SUPERFAMILY SSF56281 492 728 1.25E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 Pfam PF13567 Domain of unknown function (DUF4131) 21 173 1.3E-11 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 Pfam PF03772 Competence protein 208 464 1.8E-58 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 Gene3D G3DSA:3.60.15.10 492 724 1.9E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 SMART SM00849 501 684 5.4E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 402 6.0E-25 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VAB027_2524 ec11a49b52e96a8844a4e83a226fd8df 747 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 127 713 1.0E-121 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 398 3.5E-91 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 SUPERFAMILY SSF75005 89 398 1.2E-91 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 Gene3D G3DSA:2.115.10.20 59 408 1.2E-91 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 91 512 2.1E-134 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 SUPERFAMILY SSF49899 400 534 6.73E-22 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 413 521 4.6E-15 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 SMART SM00640 98 502 1.1E-129 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VAB027_511 ed5cd69db587809960ba1955d5d19a29 548 Gene3D G3DSA:2.60.120.560 409 533 2.9E-18 T 14-10-2018 VAB027_3092 c69cb4f77ade63633c2ba201b8893503 206 PIRSF PIRSF016938 1 202 2.1E-34 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VAB027_3092 c69cb4f77ade63633c2ba201b8893503 206 Gene3D G3DSA:1.10.10.880 2 67 7.6E-23 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VAB027_3092 c69cb4f77ade63633c2ba201b8893503 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 137 189 6.3E-20 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VAB027_3092 c69cb4f77ade63633c2ba201b8893503 206 SUPERFAMILY SSF89069 4 67 9.81E-21 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VAB027_3092 c69cb4f77ade63633c2ba201b8893503 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 98 4.8E-33 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 SUPERFAMILY SSF46689 178 226 3.0E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 Pfam PF12833 Helix-turn-helix domain 198 275 4.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 Gene3D G3DSA:1.10.10.60 235 276 9.7E-13 T 14-10-2018 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 Gene3D G3DSA:1.10.10.60 180 234 2.6E-15 T 14-10-2018 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 Pfam PF02311 AraC-like ligand binding domain 21 152 1.2E-28 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 SUPERFAMILY SSF51215 34 157 1.15E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 SUPERFAMILY SSF46689 229 275 6.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 270 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAB027_1126 35fd447e99b091f9a93889b6387003a9 276 SMART SM00342 192 274 1.0E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.6E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Gene3D G3DSA:3.40.50.300 274 634 1.2E-123 T 14-10-2018 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Gene3D G3DSA:3.40.50.300 4 266 4.2E-99 T 14-10-2018 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 8.4E-75 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Gene3D G3DSA:1.10.10.160 108 181 4.2E-99 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 SUPERFAMILY SSF52540 1 641 1.73E-162 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.684 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VAB027_3694 1c0c8f8f25534980f6f49d394d56b1b0 671 Gene3D G3DSA:1.10.486.10 377 546 1.2E-123 T 14-10-2018 VAB027_148 a66670bb8144b489c834f1699af46f07 469 SUPERFAMILY SSF55931 102 468 2.16E-139 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VAB027_148 a66670bb8144b489c834f1699af46f07 469 SUPERFAMILY SSF54368 3 100 1.19E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAB027_148 a66670bb8144b489c834f1699af46f07 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.1E-140 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAB027_148 a66670bb8144b489c834f1699af46f07 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VAB027_148 a66670bb8144b489c834f1699af46f07 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VAB027_148 a66670bb8144b489c834f1699af46f07 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAB027_148 a66670bb8144b489c834f1699af46f07 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.0E-213 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAB027_148 a66670bb8144b489c834f1699af46f07 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.1E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VAB027_148 a66670bb8144b489c834f1699af46f07 469 Gene3D G3DSA:3.30.590.10 105 457 7.5E-151 T 14-10-2018 VAB027_148 a66670bb8144b489c834f1699af46f07 469 Gene3D G3DSA:3.10.20.70 2 104 8.8E-41 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAB027_148 a66670bb8144b489c834f1699af46f07 469 SMART SM01230 102 379 6.7E-156 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAB027_599 26d3f046f410773751911d320b8db0d9 458 Gene3D G3DSA:3.40.50.1220 282 458 5.5E-89 T 14-10-2018 VAB027_599 26d3f046f410773751911d320b8db0d9 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 2.1E-201 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAB027_599 26d3f046f410773751911d320b8db0d9 458 SUPERFAMILY SSF52467 285 458 2.39E-80 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAB027_599 26d3f046f410773751911d320b8db0d9 458 PIRSF PIRSF000204 1 458 2.7E-235 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 SUPERFAMILY SSF102114 105 332 2.09E-13 T 14-10-2018 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 Gene3D G3DSA:3.20.20.70 68 338 1.2E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 6.0E-160 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 Gene3D G3DSA:1.10.150.530 5 67 1.8E-25 T 14-10-2018 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.591 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 Pfam PF04055 Radical SAM superfamily 109 285 2.7E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_1413 186a0f0838603e50e992affb80aeb473 373 PIRSF PIRSF006004 3 366 3.2E-144 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 2.5E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 SUPERFAMILY SSF46911 3 74 3.66E-30 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 Gene3D G3DSA:4.10.640.10 20 75 1.1E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.4E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.4E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.4E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.4E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 Pfam PF01084 Ribosomal protein S18 19 68 3.0E-26 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3465 84dbd0c869bdbe4e29abb3925b6d384f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.803 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2945 8eee3bac19b5a0ce0da8c8cc4daa1b0a 201 Gene3D G3DSA:3.40.50.880 1 201 2.6E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2945 8eee3bac19b5a0ce0da8c8cc4daa1b0a 201 SUPERFAMILY SSF52317 3 188 5.09E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2945 8eee3bac19b5a0ce0da8c8cc4daa1b0a 201 Pfam PF01965 DJ-1/PfpI family 3 168 1.3E-35 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VAB027_2945 8eee3bac19b5a0ce0da8c8cc4daa1b0a 201 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 181 1.5E-65 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 VAB027_1123 925fb0a5c67ace83421645f3b6c7b4e7 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 185 1.4E-28 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VAB027_1123 925fb0a5c67ace83421645f3b6c7b4e7 204 Gene3D G3DSA:3.90.850.10 7 204 2.0E-47 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAB027_1123 925fb0a5c67ace83421645f3b6c7b4e7 204 SUPERFAMILY SSF56529 12 189 8.9E-47 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 SMART SM00357 52 118 1.2E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Gene3D G3DSA:1.10.720.10 1 47 3.5E-23 T 14-10-2018 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Gene3D G3DSA:2.40.50.140 48 117 4.7E-35 T 14-10-2018 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Gene3D G3DSA:3.40.50.300 130 417 6.8E-134 T 14-10-2018 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 7.5E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 SUPERFAMILY SSF52540 90 371 2.75E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.008 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 SUPERFAMILY SSF50249 48 125 4.97E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.9E-24 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.9E-219 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 SUPERFAMILY SSF68912 1 46 5.1E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.6E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 SMART SM00959 5 47 2.4E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VAB027_3540 eb1a87cf4cf091f29ece8a6831a87ded 419 SMART SM00382 170 355 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1887 08b5c4c8b1d842ebb8576783baf17915 106 SUPERFAMILY SSF102816 3 105 3.66E-47 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VAB027_1887 08b5c4c8b1d842ebb8576783baf17915 106 PIRSF PIRSF004916 1 105 9.3E-54 T 14-10-2018 IPR007376 dsDNA mimic, putative VAB027_1887 08b5c4c8b1d842ebb8576783baf17915 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.041 T 14-10-2018 IPR007376 dsDNA mimic, putative VAB027_1887 08b5c4c8b1d842ebb8576783baf17915 106 Pfam PF04269 Protein of unknown function, DUF440 6 105 9.8E-45 T 14-10-2018 IPR007376 dsDNA mimic, putative VAB027_1887 08b5c4c8b1d842ebb8576783baf17915 106 Gene3D G3DSA:3.10.450.140 5 105 2.6E-41 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VAB027_1887 08b5c4c8b1d842ebb8576783baf17915 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 4.0E-39 T 14-10-2018 IPR007376 dsDNA mimic, putative VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.8E-17 T 14-10-2018 VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 SUPERFAMILY SSF54909 63 148 4.83E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 Gene3D G3DSA:1.10.10.10 1 56 7.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.6E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.1E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.1E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.1E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 SMART SM00344 3 112 5.6E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 Gene3D G3DSA:3.30.70.920 57 140 4.7E-26 T 14-10-2018 VAB027_1066 b03cdaecab791377bcc2a868e4037350 160 SUPERFAMILY SSF46785 2 62 2.67E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 Pfam PF13091 PLD-like domain 134 266 3.3E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 Pfam PF13091 PLD-like domain 327 445 2.0E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 PIRSF PIRSF000850 290 376 0.0011 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 PIRSF PIRSF000850 214 252 130.0 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 PIRSF PIRSF000850 102 190 48.0 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 PIRSF PIRSF000850 387 480 0.51 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 50.753 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 Gene3D G3DSA:3.30.870.10 117 311 1.4E-36 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 2.8E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 Gene3D G3DSA:3.30.870.10 314 458 1.4E-22 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 4.9E-152 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 SMART SM00155 219 246 3.7E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 SMART SM00155 397 424 1.8E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 SUPERFAMILY SSF56024 68 313 5.76E-51 T 14-10-2018 VAB027_2317 39c2bc2f2880183d18d5058823f5a7b6 484 SUPERFAMILY SSF56024 273 470 1.7E-47 T 14-10-2018 VAB027_2335 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Gene3D G3DSA:3.10.310.20 187 301 5.8E-23 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAB027_2335 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Pfam PF02833 DHHA2 domain 180 297 5.1E-15 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAB027_2335 8f5f6d842b13a67fbf8f71bc0dd2c201 301 SUPERFAMILY SSF64182 1 298 1.28E-66 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VAB027_2335 8f5f6d842b13a67fbf8f71bc0dd2c201 301 SMART SM01131 178 300 1.1E-35 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAB027_2335 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Pfam PF01368 DHH family 2 142 2.1E-21 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAB027_2335 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Gene3D G3DSA:3.90.1640.10 1 186 2.7E-63 T 14-10-2018 VAB027_3624 7610eb5573a0669f9241451b98be1544 232 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 232 42.277 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VAB027_3624 7610eb5573a0669f9241451b98be1544 232 SUPERFAMILY SSF56112 37 195 2.56E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_3624 7610eb5573a0669f9241451b98be1544 232 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 229 2.7E-66 T 14-10-2018 VAB027_3624 7610eb5573a0669f9241451b98be1544 232 Gene3D G3DSA:1.10.510.10 138 230 3.3E-15 T 14-10-2018 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 SUPERFAMILY SSF51569 4 356 2.38E-131 T 14-10-2018 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 PIRSF PIRSF001359 13 358 8.6E-95 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 5.2E-181 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 1.6E-111 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 Gene3D G3DSA:3.20.20.70 2 358 7.8E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3345 97cf583eefe0698e49ca2b6d8566adb1 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 5.1E-91 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 Pfam PF04963 Sigma-54 factor, core binding domain 101 290 1.2E-59 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 440 447 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 PIRSF PIRSF000774 1 462 2.4E-143 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 Pfam PF04552 Sigma-54, DNA binding domain 302 460 1.4E-73 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 Gene3D G3DSA:1.10.10.1330 103 221 4.8E-23 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 PRINTS PR00045 Sigma-54 factor signature 173 190 3.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 PRINTS PR00045 Sigma-54 factor signature 377 388 3.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 PRINTS PR00045 Sigma-54 factor signature 435 453 3.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 PRINTS PR00045 Sigma-54 factor signature 361 373 3.6E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 1 459 8.7E-149 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 1 24 3.5E-6 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAB027_1337 773cdc2c2e95d3ba177a6de278563bbc 462 Gene3D G3DSA:1.10.10.60 402 459 8.0E-24 T 14-10-2018 VAB027_1907 31603baa013298db65c2e6473322c5fc 218 PIRSF PIRSF023956 1 218 5.5E-77 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VAB027_1907 31603baa013298db65c2e6473322c5fc 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 216 1.1E-81 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VAB027_1907 31603baa013298db65c2e6473322c5fc 218 Gene3D G3DSA:3.40.50.150 1 217 7.4E-61 T 14-10-2018 VAB027_1907 31603baa013298db65c2e6473322c5fc 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 216 35.309 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VAB027_1907 31603baa013298db65c2e6473322c5fc 218 SUPERFAMILY SSF53335 3 214 3.5E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1907 31603baa013298db65c2e6473322c5fc 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 215 2.7E-77 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 4.1E-210 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.536 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 SUPERFAMILY SSF53383 4 395 1.75E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 Gene3D G3DSA:3.90.1150.10 40 387 1.7E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 Pfam PF00155 Aminotransferase class I and II 43 386 1.5E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_1228 6bb1e6bbbcf576a5dc4ec37715d3ae31 397 Gene3D G3DSA:3.40.640.10 58 296 1.7E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2904 88d5cc31aa58ae2780ff9a658c6135ba 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 5.3E-55 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VAB027_2904 88d5cc31aa58ae2780ff9a658c6135ba 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.616 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VAB027_2904 88d5cc31aa58ae2780ff9a658c6135ba 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 9.0E-68 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 Pfam PF03193 RsgA GTPase 99 276 2.7E-56 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 333 3.0E-85 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 SUPERFAMILY SSF52540 113 337 4.1E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 Gene3D G3DSA:2.40.50.140 35 101 7.7E-23 T 14-10-2018 VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 Gene3D G3DSA:3.40.50.300 102 275 6.6E-50 T 14-10-2018 VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 340 36.139 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VAB027_3501 25ecc47c0f8e5e636d41e2ab53feed7b 353 Gene3D G3DSA:1.10.40.50 276 350 3.6E-23 T 14-10-2018 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 5.1E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.2E-70 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 Gene3D G3DSA:3.40.190.10 31 310 2.3E-108 T 14-10-2018 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 SUPERFAMILY SSF53850 26 330 6.52E-87 T 14-10-2018 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 Gene3D G3DSA:3.40.190.10 131 315 2.3E-108 T 14-10-2018 VAB027_2098 7090862411f1bc4d98705b9c66757fd7 343 PIRSF PIRSF019574 1 343 1.4E-109 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 SMART SM00387 484 592 1.7E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 SUPERFAMILY SSF47384 358 439 3.73E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 1.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 PIRSF PIRSF036431 1 595 5.2E-189 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Gene3D G3DSA:3.30.565.10 440 592 4.0E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Gene3D G3DSA:3.30.450.20 27 56 3.7E-12 T 14-10-2018 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Gene3D G3DSA:3.30.450.20 174 284 4.1E-43 T 14-10-2018 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Gene3D G3DSA:1.10.287.130 349 436 1.5E-20 T 14-10-2018 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 6.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 Gene3D G3DSA:3.30.450.20 57 173 5.9E-38 T 14-10-2018 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 SUPERFAMILY SSF103190 48 187 1.02E-29 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 SMART SM00388 373 441 2.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2568 21880a7a4ef96e7c528915f28d94e040 597 SUPERFAMILY SSF55874 437 590 3.67E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 SUPERFAMILY SSF50331 264 342 5.95E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 Gene3D G3DSA:3.40.50.300 2 240 1.1E-74 T 14-10-2018 VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 Pfam PF08402 TOBE domain 276 342 9.1E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 SUPERFAMILY SSF52540 5 242 1.13E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 SMART SM00382 29 214 4.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3238 43f4935aefc6fea789f1835f4f595add 343 Pfam PF00005 ABC transporter 20 164 8.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 SUPERFAMILY SSF56024 7 184 1.55E-25 T 14-10-2018 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 Gene3D G3DSA:3.30.870.10 18 225 2.1E-166 T 14-10-2018 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 PIRSF PIRSF000850 1 446 1.6E-240 T 14-10-2018 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 SUPERFAMILY SSF56024 245 408 4.19E-27 T 14-10-2018 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 Pfam PF13091 PLD-like domain 251 402 1.0E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 Gene3D G3DSA:3.30.870.10 12 442 2.1E-166 T 14-10-2018 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 SMART SM00155 126 152 0.0015 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAB027_3530 823b78d2f66d09c1c72f4257c21c4de6 446 SMART SM00155 347 374 0.011 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAB027_1331 a2558c24d2beba67b4d3f4ecdc26f115 447 Gene3D G3DSA:3.30.2290.10 7 233 7.2E-84 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VAB027_1331 a2558c24d2beba67b4d3f4ecdc26f115 447 SUPERFAMILY SSF111283 12 447 1.27E-126 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VAB027_1331 a2558c24d2beba67b4d3f4ecdc26f115 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 3.9E-58 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VAB027_801 3b8f7019cda5463966a7983b86708f86 586 SUPERFAMILY SSF52794 490 578 1.26E-13 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAB027_801 3b8f7019cda5463966a7983b86708f86 586 Gene3D G3DSA:3.40.50.2300 489 579 1.1E-17 T 14-10-2018 VAB027_801 3b8f7019cda5463966a7983b86708f86 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 5.3E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAB027_801 3b8f7019cda5463966a7983b86708f86 586 PIRSF PIRSF037343 1 581 2.2E-282 T 14-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted VAB027_801 3b8f7019cda5463966a7983b86708f86 586 Pfam PF03611 PTS system sugar-specific permease component 15 407 1.0E-122 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 Gene3D G3DSA:1.10.10.10 885 952 1.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 Gene3D G3DSA:3.40.50.300 571 873 2.1E-119 T 14-10-2018 VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 Pfam PF09397 Ftsk gamma domain 893 953 1.3E-25 T 14-10-2018 IPR018541 FtsK gamma domain VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 SMART SM00843 891 956 5.3E-39 T 14-10-2018 IPR018541 FtsK gamma domain VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 SUPERFAMILY SSF52540 548 860 1.81E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 SUPERFAMILY SSF46785 891 954 8.16E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 2.2E-42 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 Pfam PF01580 FtsK/SpoIIIE family 574 787 8.6E-71 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VAB027_2548 637272e8f7d4220147da2825f9755dc9 959 Gene3D G3DSA:3.30.980.40 466 570 6.4E-33 T 14-10-2018 VAB027_1103 44b63b1338970981440a6a338635d8de 412 Gene3D G3DSA:2.40.170.10 23 412 5.4E-109 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VAB027_1103 44b63b1338970981440a6a338635d8de 412 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 396 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VAB027_1103 44b63b1338970981440a6a338635d8de 412 SUPERFAMILY SSF56935 23 412 2.33E-108 T 14-10-2018 VAB027_1103 44b63b1338970981440a6a338635d8de 412 Hamap MF_01301 Maltoporin [lamB]. 1 412 42.201 T 14-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 VAB027_1103 44b63b1338970981440a6a338635d8de 412 Pfam PF02264 LamB porin 25 412 1.9E-102 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.5E-173 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 SUPERFAMILY SSF53067 155 396 1.2E-86 T 14-10-2018 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 Pfam PF00871 Acetokinase family 5 390 5.6E-168 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 Gene3D G3DSA:3.30.420.40 2 194 7.4E-76 T 14-10-2018 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.89 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 Gene3D G3DSA:3.30.420.40 195 397 1.5E-82 T 14-10-2018 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 PIRSF PIRSF000722 1 398 6.8E-150 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_1779 81676689d06e3a0a1fec4ee0e87c58f9 398 SUPERFAMILY SSF53067 3 194 1.23E-66 T 14-10-2018 VAB027_3097 07d495033e48eea0f74f730c17417bde 323 Gene3D G3DSA:3.30.70.1400 29 115 2.4E-38 T 14-10-2018 VAB027_3097 07d495033e48eea0f74f730c17417bde 323 SUPERFAMILY SSF103025 16 235 4.87E-55 T 14-10-2018 VAB027_3097 07d495033e48eea0f74f730c17417bde 323 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 134 8.2E-5 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VAB027_3097 07d495033e48eea0f74f730c17417bde 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.6E-24 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site VAB027_3097 07d495033e48eea0f74f730c17417bde 323 Gene3D G3DSA:2.40.30.160 190 313 1.4E-31 T 14-10-2018 VAB027_3097 07d495033e48eea0f74f730c17417bde 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 43.716 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VAB027_3097 07d495033e48eea0f74f730c17417bde 323 SUPERFAMILY SSF101790 237 320 1.96E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VAB027_3097 07d495033e48eea0f74f730c17417bde 323 Gene3D G3DSA:3.30.70.1630 26 187 2.4E-38 T 14-10-2018 VAB027_1292 5131d7d1e96035ad63acca849eb526a3 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1292 5131d7d1e96035ad63acca849eb526a3 144 SUPERFAMILY SSF52080 4 143 4.32E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VAB027_1292 5131d7d1e96035ad63acca849eb526a3 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 2.6E-49 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1292 5131d7d1e96035ad63acca849eb526a3 144 Gene3D G3DSA:3.100.10.10 69 144 3.3E-13 T 14-10-2018 VAB027_1292 5131d7d1e96035ad63acca849eb526a3 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.992 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VAB027_1292 5131d7d1e96035ad63acca849eb526a3 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 4.0E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P VAB027_876 c134004bf5edf3440f0112a45b8a77ef 313 SUPERFAMILY SSF52402 152 310 7.7E-20 T 14-10-2018 VAB027_876 c134004bf5edf3440f0112a45b8a77ef 313 Gene3D G3DSA:3.40.50.12370 1 313 3.0E-85 T 14-10-2018 VAB027_876 c134004bf5edf3440f0112a45b8a77ef 313 SUPERFAMILY SSF52402 1 142 3.01E-13 T 14-10-2018 VAB027_876 c134004bf5edf3440f0112a45b8a77ef 313 Pfam PF00582 Universal stress protein family 4 140 5.4E-6 T 14-10-2018 IPR006016 UspA VAB027_876 c134004bf5edf3440f0112a45b8a77ef 313 Pfam PF00582 Universal stress protein family 150 301 2.1E-15 T 14-10-2018 IPR006016 UspA VAB027_90 ef26b1ab4c0cd396c0582e2d01b10f42 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.058 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VAB027_90 ef26b1ab4c0cd396c0582e2d01b10f42 106 Gene3D G3DSA:3.40.250.10 1 101 1.4E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_90 ef26b1ab4c0cd396c0582e2d01b10f42 106 Pfam PF00581 Rhodanese-like domain 11 98 6.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_90 ef26b1ab4c0cd396c0582e2d01b10f42 106 SMART SM00450 7 102 6.1E-18 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_90 ef26b1ab4c0cd396c0582e2d01b10f42 106 SUPERFAMILY SSF52821 1 104 1.19E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_3147 6ba275156bfe23d7300a1110b5baa40c 174 SUPERFAMILY SSF52972 1 171 2.01E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_3147 6ba275156bfe23d7300a1110b5baa40c 174 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 171 3.3E-48 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VAB027_3147 6ba275156bfe23d7300a1110b5baa40c 174 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 31.841 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VAB027_3147 6ba275156bfe23d7300a1110b5baa40c 174 Gene3D G3DSA:3.90.950.10 1 174 5.9E-78 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_3147 6ba275156bfe23d7300a1110b5baa40c 174 Pfam PF01931 Protein of unknown function DUF84 7 166 2.4E-59 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 Gene3D G3DSA:3.20.20.10 35 277 8.4E-156 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_107 8571c2755f9c348bf6655981f5949d13 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VAB027_107 8571c2755f9c348bf6655981f5949d13 417 SUPERFAMILY SSF50621 259 414 7.33E-53 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.301 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 2.4E-170 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 Gene3D G3DSA:2.40.37.10 17 404 8.4E-156 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VAB027_107 8571c2755f9c348bf6655981f5949d13 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 5.4E-72 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VAB027_107 8571c2755f9c348bf6655981f5949d13 417 SUPERFAMILY SSF51419 27 284 1.03E-81 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_107 8571c2755f9c348bf6655981f5949d13 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.8E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VAB027_234 d113ca8133d983778801baea670bbed6 188 SMART SM00841 131 186 9.2E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAB027_234 d113ca8133d983778801baea670bbed6 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.3E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAB027_234 d113ca8133d983778801baea670bbed6 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 4.8E-25 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VAB027_234 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.30.30.30 1 64 3.1E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAB027_234 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.40.50.140 130 188 4.1E-27 T 14-10-2018 VAB027_234 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50104 2 64 2.31E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAB027_234 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50249 130 187 3.6E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_234 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50249 70 128 1.8E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_234 d113ca8133d983778801baea670bbed6 188 SMART SM01185 69 123 2.6E-24 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAB027_234 d113ca8133d983778801baea670bbed6 188 PIRSF PIRSF005901 2 188 1.9E-63 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VAB027_234 d113ca8133d983778801baea670bbed6 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.0E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VAB027_234 d113ca8133d983778801baea670bbed6 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.8E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAB027_234 d113ca8133d983778801baea670bbed6 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VAB027_234 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.40.50.140 66 129 2.7E-28 T 14-10-2018 VAB027_234 d113ca8133d983778801baea670bbed6 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.037 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VAB027_2239 fd28ab1a005250ef6b78589578ac0686 350 SUPERFAMILY SSF74650 5 348 4.33E-108 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAB027_2239 fd28ab1a005250ef6b78589578ac0686 350 Gene3D G3DSA:2.70.98.10 9 350 8.1E-113 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAB027_2239 fd28ab1a005250ef6b78589578ac0686 350 Pfam PF01263 Aldose 1-epimerase 21 346 1.9E-91 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VAB027_2239 fd28ab1a005250ef6b78589578ac0686 350 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 16 348 1.8E-141 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VAB027_2239 fd28ab1a005250ef6b78589578ac0686 350 PIRSF PIRSF005096 2 350 3.4E-118 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VAB027_2239 fd28ab1a005250ef6b78589578ac0686 350 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 174 183 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 371 2.1E-8 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 SMART SM00387 419 537 9.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 536 3.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Gene3D G3DSA:3.30.450.20 200 311 8.3E-22 T 14-10-2018 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Gene3D G3DSA:3.30.565.10 382 537 3.2E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 SUPERFAMILY SSF55785 218 307 2.79E-14 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Pfam PF17203 Single cache domain 3 37 168 3.8E-18 T 14-10-2018 IPR033463 Single cache domain 3 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 SUPERFAMILY SSF55890 323 391 4.71E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 SUPERFAMILY SSF103190 39 169 1.45E-35 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Pfam PF00989 PAS fold 217 269 2.7E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 Gene3D G3DSA:3.30.450.20 33 165 9.0E-40 T 14-10-2018 VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 SUPERFAMILY SSF55874 391 534 1.83E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2252 9d7bc242561fe99b03687b7c4e9fe16d 538 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 269 6.4E-7 T 14-10-2018 IPR000014 PAS domain VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 8.9E-56 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 297 3.6E-29 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 SUPERFAMILY SSF54913 225 297 1.56E-20 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.5E-46 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 Pfam PF08029 HisG, C-terminal domain 222 295 7.0E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.616 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.40.190.10 6 219 4.5E-70 T 14-10-2018 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 SUPERFAMILY SSF53850 5 222 1.28E-67 T 14-10-2018 VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.30.70.120 225 298 1.9E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VAB027_1813 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.40.190.10 102 191 4.5E-70 T 14-10-2018 VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 Gene3D G3DSA:3.40.50.10890 202 390 1.2E-130 T 14-10-2018 VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 Gene3D G3DSA:3.60.15.10 6 421 1.2E-130 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 SUPERFAMILY SSF56281 1 432 1.97E-119 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 Pfam PF10996 Beta-Casp domain 234 364 7.2E-25 T 14-10-2018 IPR022712 Beta-Casp domain VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 SMART SM00849 13 218 4.3E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 SMART SM01027 234 364 4.1E-53 T 14-10-2018 IPR022712 Beta-Casp domain VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 434 3.6E-14 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VAB027_3585 c97fcdbfab7ffaf3ec283733b919b82d 438 Pfam PF00753 Metallo-beta-lactamase superfamily 14 204 4.4E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_542 25ec1a2d45176e269fe462f109fb2274 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 147 2.6E-7 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_542 25ec1a2d45176e269fe462f109fb2274 750 Gene3D G3DSA:2.170.130.10 33 162 5.6E-28 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_542 25ec1a2d45176e269fe462f109fb2274 750 Gene3D G3DSA:2.40.170.20 196 750 5.2E-85 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_542 25ec1a2d45176e269fe462f109fb2274 750 SUPERFAMILY SSF56935 34 749 3.36E-58 T 14-10-2018 VAB027_542 25ec1a2d45176e269fe462f109fb2274 750 Pfam PF00593 TonB dependent receptor 268 748 1.3E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_2673 8694945992dbbf59f3d0b8ad8082adf2 481 Pfam PF03553 Na+/H+ antiporter family 161 453 3.9E-67 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAB027_2673 8694945992dbbf59f3d0b8ad8082adf2 481 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.6E-163 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VAB027_850 29754982451ec2abc8b3295fe7d5966e 334 SMART SM00448 3 115 1.6E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_850 29754982451ec2abc8b3295fe7d5966e 334 Pfam PF00072 Response regulator receiver domain 5 115 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_850 29754982451ec2abc8b3295fe7d5966e 334 Gene3D G3DSA:3.40.50.2300 2 124 8.5E-26 T 14-10-2018 VAB027_850 29754982451ec2abc8b3295fe7d5966e 334 SUPERFAMILY SSF103039 141 329 2.22E-38 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_850 29754982451ec2abc8b3295fe7d5966e 334 Gene3D G3DSA:3.40.1550.10 139 328 3.8E-30 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_850 29754982451ec2abc8b3295fe7d5966e 334 SUPERFAMILY SSF52172 4 121 1.35E-27 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 152 195 8.1E-5 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 SUPERFAMILY SSF46689 5 64 5.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 SUPERFAMILY SSF48498 75 168 1.63E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 Gene3D G3DSA:1.10.10.60 1 56 2.5E-20 T 14-10-2018 VAB027_2385 6a237bfc0e1d23e9ad904ab88ad2c93f 209 Gene3D G3DSA:1.10.357.10 59 197 1.4E-24 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Pfam PF00122 E1-E2 ATPase 318 478 1.1E-46 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 SUPERFAMILY SSF81653 318 402 7.06E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 4.8E-77 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Gene3D G3DSA:3.40.1110.10 511 615 5.5E-68 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 7.3E-35 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 SUPERFAMILY SSF81665 251 764 1.96E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Gene3D G3DSA:3.40.50.1000 482 720 5.5E-68 T 14-10-2018 IPR023214 HAD superfamily VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Gene3D G3DSA:3.30.70.100 88 157 3.1E-14 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 7.9E-165 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 786 4.4E-126 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 SUPERFAMILY SSF56784 500 782 8.25E-52 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 3.8E-6 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 3.8E-6 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 3.8E-6 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 3.8E-6 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Pfam PF00403 Heavy-metal-associated domain 93 154 8.2E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Gene3D G3DSA:2.70.150.20 292 407 1.8E-32 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 2.4E-27 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 1.0E-26 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 1.0E-26 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 1.0E-26 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 1.0E-26 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 1.0E-26 T 14-10-2018 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 SUPERFAMILY SSF55008 85 162 6.81E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAB027_2110 f436a1bc63cc36d99275e167e1f3f93a 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 2.6E-154 T 14-10-2018 VAB027_1406 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.3E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VAB027_1406 63637309e2c84f2ad4ec526a85ebff1b 107 SUPERFAMILY SSF89360 1 96 6.67E-33 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAB027_1406 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.2E-57 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VAB027_1406 63637309e2c84f2ad4ec526a85ebff1b 107 Gene3D G3DSA:2.60.300.12 2 107 1.5E-37 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAB027_1406 63637309e2c84f2ad4ec526a85ebff1b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 6.9E-25 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VAB027_1406 63637309e2c84f2ad4ec526a85ebff1b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.1E-77 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 Gene3D G3DSA:3.30.70.580 1 104 3.0E-40 T 14-10-2018 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 PIRSF PIRSF001430 1 253 7.1E-78 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 SUPERFAMILY SSF55120 1 256 3.02E-94 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 8.3E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.3E-12 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.504 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1684 cf536be3f5f33e1a25ba2ea54082a819 264 Gene3D G3DSA:3.30.70.660 105 242 4.2E-50 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 SUPERFAMILY SSF51366 26 269 1.05E-80 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 65 83 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 SUPERFAMILY SSF51366 272 467 2.2E-54 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 Gene3D G3DSA:3.20.20.70 23 270 1.9E-176 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 273 469 30.034 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 18 269 34.914 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 273 465 1.6E-54 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 21 266 6.8E-95 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VAB027_1851 db1b12b6d563ec2d57f4ea38ff06d7a1 469 Gene3D G3DSA:3.20.20.70 271 463 1.9E-176 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 SUPERFAMILY SSF111369 135 196 3.01E-6 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 Pfam PF13437 HlyD family secretion protein 244 326 2.8E-15 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 Pfam PF13533 Biotin-lipoyl like 62 108 3.4E-11 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 256 277 2.6E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 91 2.6E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 377 2.6E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 Gene3D G3DSA:2.40.30.170 259 380 7.4E-32 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 Gene3D G3DSA:1.10.287.470 94 118 1.2E-11 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 SUPERFAMILY SSF111369 196 294 8.89E-12 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 Gene3D G3DSA:2.40.50.100 59 93 1.2E-11 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 SUPERFAMILY SSF111369 55 115 3.92E-10 T 14-10-2018 VAB027_2084 f15831b8f04c95f3ed4c24930880a5ab 395 Gene3D G3DSA:1.10.287.470 135 200 6.6E-11 T 14-10-2018 VAB027_1218 74c5d1678483ea6d12b1008076dbe373 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 226 7.0E-61 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VAB027_1218 74c5d1678483ea6d12b1008076dbe373 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 237 1.4E-54 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VAB027_1218 74c5d1678483ea6d12b1008076dbe373 238 Gene3D G3DSA:3.40.50.1360 1 238 1.7E-95 T 14-10-2018 VAB027_1218 74c5d1678483ea6d12b1008076dbe373 238 SUPERFAMILY SSF100950 3 237 3.21E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_1635 710cee3625951d676fd01f4584884faa 216 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAB027_1635 710cee3625951d676fd01f4584884faa 216 PIRSF PIRSF016262 1 215 9.6E-62 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_1635 710cee3625951d676fd01f4584884faa 216 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 5.0E-25 T 14-10-2018 VAB027_1635 710cee3625951d676fd01f4584884faa 216 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 2.3E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAB027_1635 710cee3625951d676fd01f4584884faa 216 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 201 6.5E-71 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_1635 710cee3625951d676fd01f4584884faa 216 Gene3D G3DSA:3.30.930.10 1 202 7.0E-65 T 14-10-2018 VAB027_1635 710cee3625951d676fd01f4584884faa 216 Hamap MF_00013 Octanoyltransferase [lipB]. 4 204 37.903 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_1635 710cee3625951d676fd01f4584884faa 216 SUPERFAMILY SSF55681 3 203 5.3E-70 T 14-10-2018 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 SUPERFAMILY SSF52518 577 794 2.44E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Gene3D G3DSA:3.40.50.11610 724 930 4.8E-173 T 14-10-2018 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 4.1E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.0E-13 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Pfam PF00676 Dehydrogenase E1 component 222 517 1.9E-49 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 SUPERFAMILY SSF52518 122 532 7.14E-88 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Gene3D G3DSA:3.40.50.12470 557 803 4.8E-173 T 14-10-2018 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 SMART SM00861 594 787 3.0E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Gene3D G3DSA:1.10.287.1150 85 167 2.0E-30 T 14-10-2018 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.0E-53 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAB027_2723 7460875a08075268ce7418e748fe3faa 936 Gene3D G3DSA:3.40.50.970 168 534 3.5E-146 T 14-10-2018 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SUPERFAMILY SSF48452 26 172 7.02E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 235 2.0E-78 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 Pfam PF13424 Tetratricopeptide repeat 104 169 7.9E-10 T 14-10-2018 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 35 68 0.17 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 103 136 9.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 69 102 0.47 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00028 139 172 0.0012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00386 83 115 66.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00386 153 185 15.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 SMART SM00386 49 81 350.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 VAB027_2260 0d2e74ae0fc85db6b79e61e69e143515 237 Gene3D G3DSA:1.25.40.10 32 237 6.7E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.3E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 SUPERFAMILY SSF52935 329 480 7.2E-38 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.2E-29 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 SUPERFAMILY SSF51621 4 346 8.24E-88 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 1.3E-130 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 SUPERFAMILY SSF50800 74 169 5.06E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 Gene3D G3DSA:3.20.20.60 6 341 5.3E-156 T 14-10-2018 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 Gene3D G3DSA:2.40.33.10 74 172 5.3E-156 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 2.2E-168 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2642 a8604cc3adb9e3660165fda53cfa34f1 481 Gene3D G3DSA:3.40.1380.20 342 476 5.3E-156 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_2596 41e479b0e7e185972fd7a2c2783f9241 92 Pfam PF05166 YcgL domain 3 74 3.0E-32 T 14-10-2018 IPR027354 YcgL domain VAB027_2596 41e479b0e7e185972fd7a2c2783f9241 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 6.0E-34 T 14-10-2018 IPR027354 YcgL domain VAB027_2596 41e479b0e7e185972fd7a2c2783f9241 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.75 T 14-10-2018 IPR027354 YcgL domain VAB027_2596 41e479b0e7e185972fd7a2c2783f9241 92 Gene3D G3DSA:3.10.510.20 1 73 8.9E-31 T 14-10-2018 IPR038068 YcgL-like superfamily VAB027_2596 41e479b0e7e185972fd7a2c2783f9241 92 SUPERFAMILY SSF160191 1 90 1.44E-37 T 14-10-2018 IPR038068 YcgL-like superfamily VAB027_1850 0105968a3614405cb6562d4b4a751299 396 Gene3D G3DSA:3.40.50.1100 9 204 1.2E-182 T 14-10-2018 VAB027_1850 0105968a3614405cb6562d4b4a751299 396 SUPERFAMILY SSF53686 5 388 5.76E-140 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_1850 0105968a3614405cb6562d4b4a751299 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_1850 0105968a3614405cb6562d4b4a751299 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 389 7.6E-197 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_1850 0105968a3614405cb6562d4b4a751299 396 Gene3D G3DSA:3.40.50.1100 53 383 1.2E-182 T 14-10-2018 VAB027_1850 0105968a3614405cb6562d4b4a751299 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 374 1.4E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_1850 0105968a3614405cb6562d4b4a751299 396 PIRSF PIRSF001413 1 395 4.4E-167 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_1850 0105968a3614405cb6562d4b4a751299 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.392 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_2287 344b911e1eff8e6eccee343c7c854df3 92 Gene3D G3DSA:2.40.240.10 1 92 3.3E-34 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_2287 344b911e1eff8e6eccee343c7c854df3 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 25.839 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VAB027_2287 344b911e1eff8e6eccee343c7c854df3 92 SUPERFAMILY SSF50715 1 92 4.53E-28 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_2287 344b911e1eff8e6eccee343c7c854df3 92 Pfam PF01386 Ribosomal L25p family 4 89 3.7E-23 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VAB027_2287 344b911e1eff8e6eccee343c7c854df3 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 4.0E-49 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 1.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 1.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Gene3D G3DSA:3.40.50.300 264 452 1.8E-54 T 14-10-2018 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Gene3D G3DSA:1.10.8.60 453 527 3.2E-11 T 14-10-2018 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Pfam PF00158 Sigma-54 interaction domain 284 445 9.7E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 SUPERFAMILY SSF52540 284 520 2.41E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Gene3D G3DSA:1.10.10.60 540 586 6.2E-9 T 14-10-2018 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Gene3D G3DSA:3.30.450.40 4 188 1.8E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 581 1.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 SMART SM00382 300 444 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 SUPERFAMILY SSF46689 489 584 1.11E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2470 d8d4ec33efdf2b627bc047c7b1b9bb8b 586 Pfam PF01590 GAF domain 83 183 1.8E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SUPERFAMILY SSF55666 451 550 2.24E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.245 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SUPERFAMILY SSF54791 555 623 2.05E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 9.7E-26 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SUPERFAMILY SSF54211 5 145 1.21E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Gene3D G3DSA:3.30.230.70 2 229 1.7E-76 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Gene3D G3DSA:3.30.230.70 234 550 3.7E-116 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SMART SM00322 553 618 2.9E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.5E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.2E-16 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SUPERFAMILY SSF55666 146 236 8.69E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SUPERFAMILY SSF54211 292 489 2.83E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Gene3D G3DSA:3.30.1370.10 551 622 7.2E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 PIRSF PIRSF005499 2 709 7.0E-299 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Gene3D G3DSA:2.40.50.140 623 694 2.6E-29 T 14-10-2018 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.0E-14 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SUPERFAMILY SSF50249 608 693 3.43E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 SMART SM00316 621 691 1.8E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_3199 8923c876e5f232a861e0294fb887df3c 709 Pfam PF00013 KH domain 558 615 4.3E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VAB027_1626 b3a17a41383e80489e432ed47710e423 398 Pfam PF10082 Putative beta-barrel porin 2 42 395 1.5E-29 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 VAB027_1075 523f8c77636036a66bf35ac02a8f7081 296 SUPERFAMILY SSF46785 4 84 1.85E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1075 523f8c77636036a66bf35ac02a8f7081 296 SUPERFAMILY SSF53850 90 292 1.99E-43 T 14-10-2018 VAB027_1075 523f8c77636036a66bf35ac02a8f7081 296 Gene3D G3DSA:1.10.10.10 3 89 6.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1075 523f8c77636036a66bf35ac02a8f7081 296 Pfam PF03466 LysR substrate binding domain 88 289 3.0E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1075 523f8c77636036a66bf35ac02a8f7081 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1075 523f8c77636036a66bf35ac02a8f7081 296 Gene3D G3DSA:3.40.190.290 92 289 8.3E-59 T 14-10-2018 VAB027_3652 f2392c15badca24d5b304416995bedda 519 Gene3D G3DSA:3.40.50.150 193 474 2.7E-81 T 14-10-2018 VAB027_3652 f2392c15badca24d5b304416995bedda 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 2.5E-22 T 14-10-2018 VAB027_3652 f2392c15badca24d5b304416995bedda 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 221 235 2.5E-22 T 14-10-2018 VAB027_3652 f2392c15badca24d5b304416995bedda 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 2.5E-22 T 14-10-2018 VAB027_3652 f2392c15badca24d5b304416995bedda 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 2.5E-22 T 14-10-2018 VAB027_3652 f2392c15badca24d5b304416995bedda 519 Pfam PF02384 N-6 DNA Methylase 172 480 1.2E-112 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAB027_3652 f2392c15badca24d5b304416995bedda 519 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 502 9.6E-196 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 VAB027_3652 f2392c15badca24d5b304416995bedda 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 297 303 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_3652 f2392c15badca24d5b304416995bedda 519 SUPERFAMILY SSF53335 10 515 7.69E-126 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3652 f2392c15badca24d5b304416995bedda 519 Pfam PF12161 HsdM N-terminal domain 10 157 6.7E-16 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VAB027_3652 f2392c15badca24d5b304416995bedda 519 Gene3D G3DSA:1.20.1260.30 1 189 7.7E-49 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Pfam PF13604 AAA domain 238 400 1.7E-30 T 14-10-2018 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 702 49.264 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Gene3D G3DSA:3.40.50.300 451 570 3.7E-26 T 14-10-2018 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Gene3D G3DSA:3.40.50.300 571 693 6.6E-27 T 14-10-2018 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 10 704 1.4E-253 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Gene3D G3DSA:3.40.50.300 207 441 1.7E-72 T 14-10-2018 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Pfam PF13538 UvrD-like helicase C-terminal domain 633 678 1.7E-13 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 SUPERFAMILY SSF52540 366 704 1.33E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 Gene3D G3DSA:1.10.10.1020 6 128 3.0E-24 T 14-10-2018 VAB027_2953 188a0b289e99721ebcf91ec09d011ef7 706 SUPERFAMILY SSF52540 16 446 4.65E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_836 2bd6d904bc22fc9f0ab5e47314a9c17a 175 Gene3D G3DSA:3.40.50.620 1 173 1.4E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_836 2bd6d904bc22fc9f0ab5e47314a9c17a 175 SUPERFAMILY SSF52374 1 173 2.94E-28 T 14-10-2018 VAB027_836 2bd6d904bc22fc9f0ab5e47314a9c17a 175 Pfam PF01467 Cytidylyltransferase-like 7 143 1.3E-6 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 Gene3D G3DSA:2.30.40.10 10 374 4.5E-103 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 PIRSF PIRSF038994 4 378 8.8E-93 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 Gene3D G3DSA:3.20.20.140 57 343 4.5E-103 T 14-10-2018 VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 SUPERFAMILY SSF51556 56 346 8.04E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 369 1.5E-84 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 Pfam PF01979 Amidohydrolase family 53 367 2.7E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAB027_2455 362e3f3f081838b361dab169ee4d8198 378 SUPERFAMILY SSF51338 4 55 2.32E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 SMART SM00842 10 196 1.2E-96 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 197 359 2.3E-111 T 14-10-2018 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.1490.110 87 169 2.3E-111 T 14-10-2018 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 PIRSF PIRSF003101 1 420 9.4E-146 T 14-10-2018 IPR020823 Cell division protein FtsA VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.102 T 14-10-2018 IPR020823 Cell division protein FtsA VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 4.1E-151 T 14-10-2018 IPR020823 Cell division protein FtsA VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 SUPERFAMILY SSF53067 198 384 1.15E-43 T 14-10-2018 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 13 379 2.3E-111 T 14-10-2018 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.90.640.10 235 300 2.3E-111 T 14-10-2018 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 Pfam PF14450 Cell division protein FtsA 207 381 9.8E-24 T 14-10-2018 VAB027_3025 2cd2ef44fc077dd758b8641f74693fd7 420 SUPERFAMILY SSF53067 8 221 4.4E-60 T 14-10-2018 VAB027_101 adf826e6107fe7a0b73c2ae5993d8f6d 398 Gene3D G3DSA:1.25.40.10 307 397 3.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_101 adf826e6107fe7a0b73c2ae5993d8f6d 398 Gene3D G3DSA:1.25.40.10 75 257 2.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_101 adf826e6107fe7a0b73c2ae5993d8f6d 398 Pfam PF07219 HemY protein N-terminus 26 132 4.1E-27 T 14-10-2018 IPR010817 HemY, N-terminal VAB027_101 adf826e6107fe7a0b73c2ae5993d8f6d 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.6E-133 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VAB027_101 adf826e6107fe7a0b73c2ae5993d8f6d 398 SUPERFAMILY SSF48452 314 389 2.62E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_101 adf826e6107fe7a0b73c2ae5993d8f6d 398 SUPERFAMILY SSF48452 85 207 1.85E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 17 283 2.2E-81 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 Pfam PF02254 TrkA-N domain 402 512 1.3E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 Gene3D G3DSA:1.20.1530.20 5 385 3.7E-83 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 Pfam PF00999 Sodium/hydrogen exchanger family 14 372 6.9E-64 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 SUPERFAMILY SSF51735 401 529 6.72E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 Gene3D G3DSA:3.40.50.720 398 560 6.7E-39 T 14-10-2018 VAB027_1264 a7aa267dc97104094f01063ecef2aa83 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 4 598 46.887 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 Pfam PF08180 B melanoma antigen family 9 36 1.3E-9 T 14-10-2018 IPR012530 B melanoma antigen-like VAB027_2143 43158670a5635e36de363d001fdeebe0 665 Gene3D G3DSA:2.30.42.10 237 321 2.9E-11 T 14-10-2018 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 Gene3D G3DSA:3.90.226.10 325 545 8.6E-58 T 14-10-2018 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 1.5E-111 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 SUPERFAMILY SSF52096 167 532 8.12E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_2143 43158670a5635e36de363d001fdeebe0 665 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 2.7E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 SMART SM00245 327 528 1.8E-67 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 SUPERFAMILY SSF50156 218 338 3.71E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 SMART SM00228 247 324 5.8E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_2143 43158670a5635e36de363d001fdeebe0 665 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 663 3.5E-41 T 14-10-2018 IPR020992 Tail specific protease, C-terminal VAB027_2143 43158670a5635e36de363d001fdeebe0 665 Pfam PF03572 Peptidase family S41 357 526 2.0E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VAB027_2013 e38799ae2b0331fdf4d6efd9610c123b 298 Gene3D G3DSA:3.20.20.60 2 298 4.7E-99 T 14-10-2018 VAB027_2013 e38799ae2b0331fdf4d6efd9610c123b 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 1.7E-127 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VAB027_2013 e38799ae2b0331fdf4d6efd9610c123b 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 259 4.2E-45 T 14-10-2018 VAB027_2013 e38799ae2b0331fdf4d6efd9610c123b 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 50.19 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VAB027_2013 e38799ae2b0331fdf4d6efd9610c123b 298 SUPERFAMILY SSF51621 5 294 2.51E-97 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_2013 e38799ae2b0331fdf4d6efd9610c123b 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 SMART SM00344 12 121 1.4E-54 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 SUPERFAMILY SSF46785 12 70 3.07E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 Gene3D G3DSA:1.10.10.10 1 63 5.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.2E-21 T 14-10-2018 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 Gene3D G3DSA:3.30.70.920 64 159 1.9E-24 T 14-10-2018 VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-24 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAB027_2549 f2a84abe1e146181795b2e6b09e8b2e9 164 SUPERFAMILY SSF54909 74 158 4.69E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 Pfam PF02754 Cysteine-rich domain 175 261 3.1E-13 T 14-10-2018 IPR004017 Cysteine-rich domain VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 Pfam PF02754 Cysteine-rich domain 305 388 1.5E-11 T 14-10-2018 IPR004017 Cysteine-rich domain VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 SUPERFAMILY SSF46548 15 91 2.59E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 Pfam PF13183 4Fe-4S dicluster domain 15 79 1.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 407 1.7E-226 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 VAB027_429 1f5c2563e3bfd5cae3c27546d60a4869 413 Gene3D G3DSA:1.10.1060.10 3 96 1.5E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 SMART SM00897 27 216 5.9E-25 T 14-10-2018 IPR013702 FIST domain, N-terminal VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 Pfam PF10442 FIST C domain 220 340 9.7E-7 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 SMART SM01204 217 343 1.2E-10 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 Pfam PF00563 EAL domain 599 825 7.1E-57 T 14-10-2018 IPR001633 EAL domain VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 SUPERFAMILY SSF141868 599 826 4.71E-55 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 SMART SM00052 592 829 1.2E-42 T 14-10-2018 IPR001633 EAL domain VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 Gene3D G3DSA:3.20.20.450 592 829 5.2E-58 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 Pfam PF08495 FIST N domain 30 215 5.4E-20 T 14-10-2018 IPR013702 FIST domain, N-terminal VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 419 480 1.8E-8 T 14-10-2018 IPR000160 GGDEF domain VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 SMART SM00267 406 579 0.0019 T 14-10-2018 IPR000160 GGDEF domain VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 SUPERFAMILY SSF55073 423 573 1.8E-9 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_112 8427ff07489615cc6616a19dc9e3011a 829 Gene3D G3DSA:3.30.70.270 416 591 4.9E-13 T 14-10-2018 VAB027_1647 3a2a93f4bf186e7e89f014c640e39680 510 SUPERFAMILY SSF56317 216 485 3.92E-40 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAB027_1647 3a2a93f4bf186e7e89f014c640e39680 510 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.504 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VAB027_1647 3a2a93f4bf186e7e89f014c640e39680 510 Gene3D G3DSA:3.60.110.10 210 480 6.4E-15 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAB027_1647 3a2a93f4bf186e7e89f014c640e39680 510 Pfam PF00795 Carbon-nitrogen hydrolase 222 473 1.9E-41 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VAB027_1647 3a2a93f4bf186e7e89f014c640e39680 510 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 1.4E-97 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 174 329 9.2E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 SMART SM01086 335 429 2.1E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 SMART SM00382 49 332 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 Gene3D G3DSA:1.10.8.60 335 440 7.5E-40 T 14-10-2018 VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.6E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.125 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 8.5E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 SUPERFAMILY SSF52540 3 441 2.59E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_221 a5d14eaaa51cd58a49d38943921bccee 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.5E-221 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VAB027_1260 f2c982e2d30ab257f8f0457b50073590 161 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 6.6E-27 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VAB027_1260 f2c982e2d30ab257f8f0457b50073590 161 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 118 5.6E-33 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VAB027_211 8dda4ca0fcdd7590b80673761211c313 295 SUPERFAMILY SSF51730 21 293 4.32E-95 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VAB027_211 8dda4ca0fcdd7590b80673761211c313 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 2.7E-103 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VAB027_211 8dda4ca0fcdd7590b80673761211c313 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 1.8E-100 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAB027_211 8dda4ca0fcdd7590b80673761211c313 295 Gene3D G3DSA:3.20.20.220 1 295 1.4E-109 T 14-10-2018 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 PIRSF PIRSF000445 1 419 2.3E-157 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 Gene3D G3DSA:3.30.460.30 1 156 2.7E-59 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 SUPERFAMILY SSF69742 1 156 5.89E-49 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 8.0E-146 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 Gene3D G3DSA:3.40.50.720 159 311 1.5E-44 T 14-10-2018 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.783 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 6.5E-22 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 SUPERFAMILY SSF69075 315 416 4.71E-27 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.7E-52 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 SUPERFAMILY SSF51735 161 313 2.89E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2806 a6cebb05b22355efaaa9fbc9d485efc0 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.8E-50 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VAB027_691 5873fcf115775a2d12200120f251af58 160 Pfam PF13302 Acetyltransferase (GNAT) domain 3 135 9.0E-12 T 14-10-2018 IPR000182 GNAT domain VAB027_691 5873fcf115775a2d12200120f251af58 160 Gene3D G3DSA:3.40.630.30 13 157 6.5E-18 T 14-10-2018 VAB027_691 5873fcf115775a2d12200120f251af58 160 SUPERFAMILY SSF55729 2 143 3.61E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF52540 5 211 1.44E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF54980 306 391 3.31E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.30.70.870 310 594 5.1E-130 T 14-10-2018 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF50447 155 303 7.95E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF54980 402 516 3.79E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.7E-296 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.2E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 5.9E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.30.70.240 393 486 5.1E-130 T 14-10-2018 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:2.40.50.250 487 603 5.1E-130 T 14-10-2018 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.4E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF00679 Elongation factor G C-terminus 399 481 3.3E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:2.40.30.10 203 303 1.8E-33 T 14-10-2018 VAB027_150 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.40.50.300 5 202 3.0E-68 T 14-10-2018 VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 Pfam PF00266 Aminotransferase class-V 5 368 3.6E-87 T 14-10-2018 IPR000192 Aminotransferase class V domain VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 PIRSF PIRSF005572 2 384 3.4E-137 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 SUPERFAMILY SSF53383 5 390 4.03E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 7.3E-231 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 Gene3D G3DSA:3.40.640.10 16 262 3.7E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 Gene3D G3DSA:3.90.1150.10 5 375 3.7E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1404 e9379589f787dbcfd6625829efa4acd3 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.913 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VAB027_831 d9d01bb2e231ba7d51038042b05fc14b 401 SUPERFAMILY SSF103473 9 384 1.22E-54 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_831 d9d01bb2e231ba7d51038042b05fc14b 401 Pfam PF07690 Major Facilitator Superfamily 13 354 3.8E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_831 d9d01bb2e231ba7d51038042b05fc14b 401 Gene3D G3DSA:1.20.1720.10 10 384 2.4E-96 T 14-10-2018 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 464 1.4E-194 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 SUPERFAMILY SSF55604 6 82 9.55E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.5E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 Gene3D G3DSA:3.30.1360.60 1 78 7.3E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 1.8E-22 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 1.4E-93 T 14-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 Pfam PF02378 Phosphotransferase system, EIIC 110 409 6.6E-51 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_513 a41647d1afa9ed7be92e6f5ffa44217c 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_2057 471ac21ed15760c0e925412820c6f4bc 152 Gene3D G3DSA:1.10.3680.10 2 138 9.1E-18 T 14-10-2018 IPR029024 TerB-like VAB027_2057 471ac21ed15760c0e925412820c6f4bc 152 SUPERFAMILY SSF158682 1 147 6.41E-27 T 14-10-2018 IPR029024 TerB-like VAB027_2057 471ac21ed15760c0e925412820c6f4bc 152 Pfam PF05099 Tellurite resistance protein TerB 5 142 4.8E-38 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.357 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.3E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.3E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.3E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.3E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 6.8E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 Gene3D G3DSA:1.20.5.1030 67 122 9.9E-17 T 14-10-2018 IPR038379 SecE superfamily VAB027_3520 997466a7aeda660ab4d5fdb4574c7fa5 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 6.8E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 332 6.2E-120 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 310 5.8E-13 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 Gene3D G3DSA:3.40.50.720 6 328 1.5E-120 T 14-10-2018 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 Gene3D G3DSA:3.30.360.10 153 311 1.5E-120 T 14-10-2018 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 SUPERFAMILY SSF55347 154 307 1.31E-48 T 14-10-2018 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 SUPERFAMILY SSF51735 1 168 5.85E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 333 37.894 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 SMART SM00859 3 146 4.4E-46 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAB027_247 745fc920dd6b7aa9f7948162a47bc5da 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.5E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAB027_798 800c6f43979554d1a0d8d68367a714f9 177 Pfam PF01292 Prokaryotic cytochrome b561 7 175 8.9E-24 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAB027_798 800c6f43979554d1a0d8d68367a714f9 177 SUPERFAMILY SSF81342 4 175 3.14E-30 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 SUPERFAMILY SSF161093 280 451 2.62E-44 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 SMART SM00924 36 139 3.6E-36 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Gene3D G3DSA:1.10.357.20 277 452 9.0E-46 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 453 1.8E-87 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 SUPERFAMILY SSF158791 13 136 2.35E-30 T 14-10-2018 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 SUPERFAMILY SSF54631 138 278 1.52E-28 T 14-10-2018 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Gene3D G3DSA:3.10.580.10 135 262 2.6E-37 T 14-10-2018 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Pfam PF00571 CBS domain 213 257 2.7E-4 T 14-10-2018 IPR000644 CBS domain VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Pfam PF00571 CBS domain 140 195 1.6E-4 T 14-10-2018 IPR000644 CBS domain VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Pfam PF01769 Divalent cation transporter 323 444 2.0E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Pfam PF03448 MgtE intracellular N domain 36 137 2.6E-26 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAB027_1332 c3897f06306c3405697c2d656a4b0085 453 Gene3D G3DSA:1.25.60.10 9 134 7.9E-20 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Gene3D G3DSA:3.30.450.20 19 131 1.9E-11 T 14-10-2018 VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Pfam PF13188 PAS domain 136 181 2.3E-5 T 14-10-2018 IPR000014 PAS domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SMART SM00091 11 77 2.4E-4 T 14-10-2018 IPR000014 PAS domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SMART SM00091 134 201 0.35 T 14-10-2018 IPR000014 PAS domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 123 1.8E-8 T 14-10-2018 IPR000014 PAS domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 409 1.4E-43 T 14-10-2018 IPR000160 GGDEF domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SMART SM00267 247 413 8.2E-59 T 14-10-2018 IPR000160 GGDEF domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SUPERFAMILY SSF141868 430 677 3.79E-86 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SUPERFAMILY SSF55073 261 415 1.18E-46 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 410 1.5E-38 T 14-10-2018 IPR000160 GGDEF domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Pfam PF08448 PAS fold 18 122 2.9E-7 T 14-10-2018 IPR013656 PAS fold-4 VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Gene3D G3DSA:3.30.70.270 256 419 3.2E-52 T 14-10-2018 VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SMART SM00052 423 669 1.6E-107 T 14-10-2018 IPR001633 EAL domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SUPERFAMILY SSF55785 9 118 1.6E-10 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 SUPERFAMILY SSF55785 118 203 9.33E-8 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Gene3D G3DSA:3.20.20.450 424 679 8.7E-96 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Pfam PF00563 EAL domain 430 664 2.6E-73 T 14-10-2018 IPR001633 EAL domain VAB027_3193 35cc5da6b98d9df9143e1b5b9ea92b14 684 Gene3D G3DSA:3.30.450.20 132 224 8.1E-7 T 14-10-2018 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Gene3D G3DSA:3.40.50.2300 1 129 1.2E-52 T 14-10-2018 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 SUPERFAMILY SSF53383 130 562 2.46E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Gene3D G3DSA:3.90.100.10 595 711 4.5E-44 T 14-10-2018 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Gene3D G3DSA:3.90.1150.10 425 594 1.5E-70 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 PIRSF PIRSF009393 1 711 3.0E-287 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.7E-44 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 SUPERFAMILY SSF55904 567 708 5.75E-42 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Gene3D G3DSA:3.40.640.10 130 424 3.1E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_3565 294197a35fdc5c9ab42fce671c8babff 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.2E-186 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 2.1E-279 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.204 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Gene3D G3DSA:3.90.480.20 22 412 2.8E-82 T 14-10-2018 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 545 1.4E-4 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 2.4E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 2.4E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Gene3D G3DSA:3.30.413.10 146 353 2.8E-82 T 14-10-2018 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 SUPERFAMILY SSF55124 19 150 2.62E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 SUPERFAMILY SSF56014 434 566 3.66E-32 T 14-10-2018 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Gene3D G3DSA:3.30.413.10 432 574 1.0E-33 T 14-10-2018 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 SUPERFAMILY SSF56014 154 349 5.1E-58 T 14-10-2018 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 5.9E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 422 3.4E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 SUPERFAMILY SSF55124 351 428 1.5E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3450 ff2d053786b8574ba40d9403c19cc340 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 4.0E-45 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 3.4E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 Gene3D G3DSA:3.10.180.10 158 355 4.8E-69 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 SUPERFAMILY SSF54593 5 341 3.33E-77 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 Gene3D G3DSA:3.10.180.10 3 155 9.8E-48 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.5E-134 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 PIRSF PIRSF009283 1 355 5.1E-125 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VAB027_2022 7097e50f4c6da9886a7cb6ecaa870017 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 2.1E-56 T 14-10-2018 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 SUPERFAMILY SSF46894 513 581 1.67E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 ProSitePatterns PS00622 LuxR-type HTH domain signature. 541 568 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 Pfam PF00563 EAL domain 141 370 4.0E-67 T 14-10-2018 IPR001633 EAL domain VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 SUPERFAMILY SSF141868 140 383 4.97E-75 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 Gene3D G3DSA:1.10.10.10 515 583 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 SMART SM00052 134 375 6.1E-70 T 14-10-2018 IPR001633 EAL domain VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 Gene3D G3DSA:3.40.50.2300 1 133 2.9E-22 T 14-10-2018 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 Pfam PF00072 Response regulator receiver domain 3 117 2.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 SMART SM00448 1 118 3.4E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 Pfam PF00196 Bacterial regulatory proteins, luxR family 526 580 9.5E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 SUPERFAMILY SSF52172 1 128 1.99E-23 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 Gene3D G3DSA:3.20.20.450 138 384 1.1E-75 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 SMART SM00421 524 581 4.0E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 527 541 2.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 541 557 2.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_2299 be57d71d6581b72d1e04bdd2e78c61df 584 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 557 569 2.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.339 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.1E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 Gene3D G3DSA:3.40.470.10 1 226 9.0E-107 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 SUPERFAMILY SSF52141 6 221 2.62E-96 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 SMART SM00986 49 210 2.7E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 SMART SM00987 49 210 2.7E-40 T 14-10-2018 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 7.8E-88 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_2989 c095d8eadad8f60c01d91e55c521fe63 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Gene3D G3DSA:3.30.360.10 612 782 9.1E-106 T 14-10-2018 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 SUPERFAMILY SSF55347 601 784 3.4E-47 T 14-10-2018 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 1.2E-16 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.6E-67 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 PIRSF PIRSF000727 5 803 1.0E-289 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Gene3D G3DSA:3.40.1160.10 8 290 3.2E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Gene3D G3DSA:3.40.50.720 451 797 9.1E-106 T 14-10-2018 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Gene3D G3DSA:3.30.70.260 381 444 2.4E-5 T 14-10-2018 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 SUPERFAMILY SSF53633 5 291 2.62E-60 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 SUPERFAMILY SSF51735 448 623 3.2E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Gene3D G3DSA:1.20.120.1320 44 137 3.2E-76 T 14-10-2018 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Pfam PF00742 Homoserine dehydrogenase 601 796 1.9E-44 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAB027_212 051fa0f647c7f12e68f3494885d24d66 803 Pfam PF00696 Amino acid kinase family 5 277 3.1E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-39 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 PIRSF PIRSF004682 1 185 5.5E-64 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 5.6E-37 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 Pfam PF13242 HAD-hyrolase-like 107 176 8.3E-13 T 14-10-2018 VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 SUPERFAMILY SSF56784 4 182 1.49E-50 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.8E-79 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VAB027_1544 3eab78e3f44c8f18a80bea895aba2cfd 186 Gene3D G3DSA:3.40.50.1000 2 186 1.1E-61 T 14-10-2018 IPR023214 HAD superfamily VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 Gene3D G3DSA:1.10.10.10 3 88 6.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 Gene3D G3DSA:3.40.190.10 92 276 1.5E-34 T 14-10-2018 VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 SUPERFAMILY SSF46785 3 111 7.35E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 Pfam PF03466 LysR substrate binding domain 90 285 1.4E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 SUPERFAMILY SSF53850 87 286 1.29E-36 T 14-10-2018 VAB027_619 2a7eebbeae68ad09acf4c7db98d23f3b 301 Gene3D G3DSA:3.40.190.10 165 268 1.5E-34 T 14-10-2018 VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 Gene3D G3DSA:1.20.120.530 97 236 2.4E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.5E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 Gene3D G3DSA:1.10.10.10 1 74 4.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 SUPERFAMILY SSF48008 97 235 2.88E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 SUPERFAMILY SSF46785 5 77 5.73E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 Pfam PF07729 FCD domain 99 226 4.5E-20 T 14-10-2018 IPR011711 GntR, C-terminal VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 SMART SM00895 99 227 5.4E-20 T 14-10-2018 IPR011711 GntR, C-terminal VAB027_3040 039969d462b2b2122f96c7cfa93667e2 256 SMART SM00345 15 74 2.8E-27 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2269 7689957a73629386de5f1ba7b2fab6e1 437 SUPERFAMILY SSF56954 6 421 9.81E-88 T 14-10-2018 VAB027_2269 7689957a73629386de5f1ba7b2fab6e1 437 Pfam PF02321 Outer membrane efflux protein 233 417 3.5E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2269 7689957a73629386de5f1ba7b2fab6e1 437 Pfam PF02321 Outer membrane efflux protein 24 213 1.5E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2269 7689957a73629386de5f1ba7b2fab6e1 437 Gene3D G3DSA:1.20.1600.10 22 429 1.3E-82 T 14-10-2018 VAB027_2269 7689957a73629386de5f1ba7b2fab6e1 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 432 4.1E-141 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VAB027_475 de7efc79cfa359b97288d6d5be47cfe1 382 Gene3D G3DSA:1.20.1090.10 181 381 1.6E-32 T 14-10-2018 VAB027_475 de7efc79cfa359b97288d6d5be47cfe1 382 SUPERFAMILY SSF56796 3 380 4.71E-95 T 14-10-2018 VAB027_475 de7efc79cfa359b97288d6d5be47cfe1 382 Gene3D G3DSA:3.40.50.1970 1 180 3.0E-49 T 14-10-2018 VAB027_475 de7efc79cfa359b97288d6d5be47cfe1 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 354 2.8E-78 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAB027_590 5055a81128ac856134d7354309d701fb 334 SUPERFAMILY SSF52440 3 115 9.5E-28 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_590 5055a81128ac856134d7354309d701fb 334 Pfam PF01820 D-ala D-ala ligase N-terminus 6 106 1.3E-21 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_590 5055a81128ac856134d7354309d701fb 334 Pfam PF07478 D-ala D-ala ligase C-terminus 126 326 4.0E-53 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_590 5055a81128ac856134d7354309d701fb 334 Gene3D G3DSA:3.30.1490.20 132 199 6.7E-82 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_590 5055a81128ac856134d7354309d701fb 334 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 329 4.5E-108 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_590 5055a81128ac856134d7354309d701fb 334 Gene3D G3DSA:3.40.50.20 19 326 6.7E-82 T 14-10-2018 VAB027_590 5055a81128ac856134d7354309d701fb 334 Gene3D G3DSA:3.30.470.20 105 320 6.7E-82 T 14-10-2018 VAB027_590 5055a81128ac856134d7354309d701fb 334 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_590 5055a81128ac856134d7354309d701fb 334 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 33.154 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_590 5055a81128ac856134d7354309d701fb 334 PIRSF PIRSF039102 1 334 1.3E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_590 5055a81128ac856134d7354309d701fb 334 SUPERFAMILY SSF56059 116 330 9.49E-42 T 14-10-2018 VAB027_590 5055a81128ac856134d7354309d701fb 334 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 467 2.3E-79 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 SUPERFAMILY SSF161070 3 471 6.28E-150 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 9.0E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2646 c83725ca71e485daa883dff5562dad49 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 Pfam PF00717 Peptidase S24-like 85 162 4.0E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VAB027_3088 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.170.230.10 154 230 9.6E-75 T 14-10-2018 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.10.109.10 77 271 9.6E-75 T 14-10-2018 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 8.5E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 8.5E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 8.5E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.6E-6 T 14-10-2018 IPR019533 Peptidase S26 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 4.4E-48 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAB027_3088 459a291734a5a64234f01c63a17854fc 298 SUPERFAMILY SSF51306 77 297 2.51E-70 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VAB027_669 de035059cf43775e652e4edca73f2335 105 Pfam PF01845 CcdB protein 3 104 7.2E-34 T 14-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 VAB027_669 de035059cf43775e652e4edca73f2335 105 SUPERFAMILY SSF50118 3 105 9.81E-31 T 14-10-2018 VAB027_669 de035059cf43775e652e4edca73f2335 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 4.0E-37 T 14-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 VAB027_669 de035059cf43775e652e4edca73f2335 105 Gene3D G3DSA:2.30.30.110 1 105 4.6E-39 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 SUPERFAMILY SSF52540 353 601 3.86E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 Pfam PF00005 ABC transporter 378 531 1.8E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 SUPERFAMILY SSF90123 31 344 1.83E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 Pfam PF00664 ABC transporter transmembrane region 41 309 4.3E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 SMART SM00382 386 577 6.7E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 Gene3D G3DSA:1.20.1560.10 6 344 5.4E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3671 137e4d03d524bc82f4d5c792f09494f0 609 Gene3D G3DSA:3.40.50.300 351 604 8.1E-93 T 14-10-2018 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Gene3D G3DSA:3.40.50.20 2 95 4.6E-39 T 14-10-2018 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 7.3E-36 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 SUPERFAMILY SSF52440 1 103 7.05E-38 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Gene3D G3DSA:3.30.1490.20 121 190 1.8E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 SUPERFAMILY SSF51246 329 424 1.1E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 5.0E-82 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 5.9E-30 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Gene3D G3DSA:3.30.470.20 191 329 1.1E-60 T 14-10-2018 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.889 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 Gene3D G3DSA:3.90.600.10 330 429 5.8E-35 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 SMART SM01210 330 423 3.8E-56 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.0E-186 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 SUPERFAMILY SSF56059 104 323 8.31E-68 T 14-10-2018 VAB027_3570 0001bc30614476534089ece4cdebb15c 429 SMART SM01209 103 296 8.9E-140 T 14-10-2018 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 SUPERFAMILY SSF48179 348 487 1.07E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 Gene3D G3DSA:3.40.50.720 1 208 1.2E-86 T 14-10-2018 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 Gene3D G3DSA:1.10.1040.10 209 494 6.7E-120 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.3E-59 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 SUPERFAMILY SSF48179 210 341 1.7E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 SUPERFAMILY SSF51735 27 208 6.75E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 5.9E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 9.4E-16 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.6E-123 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAB027_3699 322d07d4a3003628ab4676d6d5e08b97 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.558 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF14706 Transposase DNA-binding 9 65 2.3E-16 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:3.90.350.10 66 347 1.7E-79 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:1.10.740.10 348 458 2.9E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 SUPERFAMILY SSF53098 1 460 6.98E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:1.10.246.40 2 65 1.5E-23 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF01609 Transposase DDE domain 220 360 2.4E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_2866 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF02281 Transposase Tn5 dimerisation domain 369 455 4.8E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF14706 Transposase DNA-binding 9 65 2.3E-16 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:3.90.350.10 66 347 1.7E-79 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:1.10.740.10 348 458 2.9E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 SUPERFAMILY SSF53098 1 460 6.98E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:1.10.246.40 2 65 1.5E-23 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF01609 Transposase DDE domain 220 360 2.4E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_317 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF02281 Transposase Tn5 dimerisation domain 369 455 4.8E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF14706 Transposase DNA-binding 9 65 2.3E-16 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:3.90.350.10 66 347 1.7E-79 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:1.10.740.10 348 458 2.9E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 SUPERFAMILY SSF53098 1 460 6.98E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 Gene3D G3DSA:1.10.246.40 2 65 1.5E-23 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF01609 Transposase DDE domain 220 360 2.4E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_540 b0042df69f23b5f836e68792ff420fd0 462 Pfam PF02281 Transposase Tn5 dimerisation domain 369 455 4.8E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 Pfam PF04055 Radical SAM superfamily 371 576 3.6E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 5.2E-259 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 SMART SM00729 367 617 4.1E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 Pfam PF08497 Radical SAM N-terminal 24 370 1.3E-141 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.566 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 SUPERFAMILY SSF102114 368 604 2.75E-9 T 14-10-2018 VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 Pfam PF11842 Domain of unknown function (DUF3362) 585 726 2.2E-41 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VAB027_2356 1fcae4749539290124cbed4d05c3ac47 785 Gene3D G3DSA:3.80.30.20 366 628 4.5E-12 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_3053 546c3773ca6d032d4d1c4a0e5985c146 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 7.8E-65 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VAB027_3053 546c3773ca6d032d4d1c4a0e5985c146 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.054 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VAB027_3053 546c3773ca6d032d4d1c4a0e5985c146 202 Gene3D G3DSA:3.40.50.300 1 201 1.8E-66 T 14-10-2018 VAB027_3053 546c3773ca6d032d4d1c4a0e5985c146 202 SUPERFAMILY SSF52540 1 192 5.25E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3053 546c3773ca6d032d4d1c4a0e5985c146 202 Pfam PF01121 Dephospho-CoA kinase 4 180 3.9E-70 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VAB027_3257 cfcc643ecb562afad9d7d9794d936160 305 SUPERFAMILY SSF52540 3 230 6.04E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3257 cfcc643ecb562afad9d7d9794d936160 305 SMART SM00382 29 212 9.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3257 cfcc643ecb562afad9d7d9794d936160 305 Pfam PF00005 ABC transporter 20 164 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3257 cfcc643ecb562afad9d7d9794d936160 305 Gene3D G3DSA:3.40.50.300 1 235 1.7E-66 T 14-10-2018 VAB027_3257 cfcc643ecb562afad9d7d9794d936160 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_376 c0b49ce515aa9bc1b593e43d9c819b4c 278 Gene3D G3DSA:3.40.190.10 101 235 2.8E-87 T 14-10-2018 VAB027_376 c0b49ce515aa9bc1b593e43d9c819b4c 278 Pfam PF12727 PBP superfamily domain 44 258 8.0E-40 T 14-10-2018 IPR024370 PBP domain VAB027_376 c0b49ce515aa9bc1b593e43d9c819b4c 278 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 17 272 9.7E-67 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VAB027_376 c0b49ce515aa9bc1b593e43d9c819b4c 278 Gene3D G3DSA:3.40.190.10 30 272 2.8E-87 T 14-10-2018 VAB027_376 c0b49ce515aa9bc1b593e43d9c819b4c 278 SUPERFAMILY SSF53850 27 272 2.36E-64 T 14-10-2018 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 SUPERFAMILY SSF54849 137 202 1.9E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 Gene3D G3DSA:3.50.7.10 192 372 2.1E-235 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.081 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 Gene3D G3DSA:3.30.260.10 136 410 2.1E-235 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 SUPERFAMILY SSF52029 185 376 5.76E-79 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.2E-100 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 SUPERFAMILY SSF48592 7 521 8.33E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 PRINTS PR00298 60kDa chaperonin signature 350 375 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 PRINTS PR00298 60kDa chaperonin signature 268 291 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 PRINTS PR00298 60kDa chaperonin signature 83 110 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 PRINTS PR00298 60kDa chaperonin signature 398 419 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 PRINTS PR00298 60kDa chaperonin signature 27 53 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 7.0E-249 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_365 dfa8b3f76b16fb68b2d565849515ad50 530 Gene3D G3DSA:1.10.560.10 8 521 2.1E-235 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VAB027_1281 b5c9a463e207be38c908743088107eba 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.6E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1281 b5c9a463e207be38c908743088107eba 63 SUPERFAMILY SSF46561 1 61 1.7E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1281 b5c9a463e207be38c908743088107eba 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1281 b5c9a463e207be38c908743088107eba 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.7E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1281 b5c9a463e207be38c908743088107eba 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.159 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1281 b5c9a463e207be38c908743088107eba 63 Gene3D G3DSA:1.10.287.310 1 63 1.3E-31 T 14-10-2018 VAB027_1936 9581a1fb3f52782941d0f8a8674a21f2 299 Gene3D G3DSA:1.10.10.60 241 298 1.5E-15 T 14-10-2018 VAB027_1936 9581a1fb3f52782941d0f8a8674a21f2 299 Pfam PF12833 Helix-turn-helix domain 214 293 2.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1936 9581a1fb3f52782941d0f8a8674a21f2 299 SMART SM00342 208 291 2.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1936 9581a1fb3f52782941d0f8a8674a21f2 299 SUPERFAMILY SSF46689 191 242 2.9E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1936 9581a1fb3f52782941d0f8a8674a21f2 299 Gene3D G3DSA:1.10.10.60 189 240 7.0E-13 T 14-10-2018 VAB027_1936 9581a1fb3f52782941d0f8a8674a21f2 299 SUPERFAMILY SSF46689 245 295 5.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 Gene3D G3DSA:3.30.230.10 1 165 1.1E-5 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.0E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.0E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.0E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.7E-213 T 14-10-2018 IPR004482 Mg chelatase-related protein VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 5.6E-91 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.8E-30 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 SUPERFAMILY SSF54211 2 168 9.1E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.0E-47 T 14-10-2018 VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 Gene3D G3DSA:3.40.50.300 181 500 3.6E-54 T 14-10-2018 VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 SMART SM00382 210 390 2.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_21 4717c331fdb7b47e15ca8114df43eb3a 507 SUPERFAMILY SSF52540 190 500 2.18E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_520 3aa443966da9ff84127f9b57d388dd77 580 SUPERFAMILY SSF69593 43 252 9.94E-14 T 14-10-2018 VAB027_520 3aa443966da9ff84127f9b57d388dd77 580 SUPERFAMILY SSF55729 310 456 3.97E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_520 3aa443966da9ff84127f9b57d388dd77 580 Pfam PF13444 Acetyltransferase (GNAT) domain 327 428 3.0E-20 T 14-10-2018 VAB027_520 3aa443966da9ff84127f9b57d388dd77 580 SMART SM00563 74 197 2.1E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_520 3aa443966da9ff84127f9b57d388dd77 580 Pfam PF01553 Acyltransferase 66 194 2.0E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_2123 cad0183a2a86b358b3bc357ec60489a0 131 Pfam PF02794 RTX toxin acyltransferase family 1 128 3.1E-43 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VAB027_1054 092839148bd3505f9964375912cf598f 211 SUPERFAMILY SSF50475 14 211 8.98E-66 T 14-10-2018 VAB027_1054 092839148bd3505f9964375912cf598f 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 3.1E-89 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_1054 092839148bd3505f9964375912cf598f 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.522 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_1054 092839148bd3505f9964375912cf598f 211 Gene3D G3DSA:2.30.110.10 13 211 9.5E-78 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAB027_1054 092839148bd3505f9964375912cf598f 211 PIRSF PIRSF000190 1 211 3.2E-80 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_1054 092839148bd3505f9964375912cf598f 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 6.4E-23 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_1054 092839148bd3505f9964375912cf598f 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_1054 092839148bd3505f9964375912cf598f 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 1.0E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 SUPERFAMILY SSF56954 170 261 1.07E-5 T 14-10-2018 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 Pfam PF13437 HlyD family secretion protein 316 431 1.0E-17 T 14-10-2018 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 4.4E-137 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 1.5E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 SUPERFAMILY SSF111369 63 123 1.44E-5 T 14-10-2018 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 Gene3D G3DSA:2.40.50.100 71 142 5.9E-6 T 14-10-2018 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 Gene3D G3DSA:1.10.287.470 192 316 3.3E-16 T 14-10-2018 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 Pfam PF13533 Biotin-lipoyl like 75 108 2.6E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 Gene3D G3DSA:2.40.30.170 354 441 3.3E-16 T 14-10-2018 VAB027_1053 f51a7424970e4317e3ba95b15e383da4 463 Gene3D G3DSA:2.40.50.100 317 353 3.3E-16 T 14-10-2018 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 146 2.2E-58 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 SUPERFAMILY SSF54611 4 142 5.67E-51 T 14-10-2018 IPR035958 SecB-like superfamily VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 124 142 4.2E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 74 94 4.2E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 14 31 4.2E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 98 120 4.2E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 146 32.261 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 Gene3D G3DSA:3.10.420.10 2 153 5.2E-58 T 14-10-2018 IPR035958 SecB-like superfamily VAB027_241 c11fe6565d8c0a65a4569a348644d5d7 154 Pfam PF02556 Preprotein translocase subunit SecB 6 145 4.6E-55 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 6.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 Gene3D G3DSA:2.70.210.12 1 158 1.0E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 SUPERFAMILY SSF82051 2 157 2.62E-53 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.7E-142 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 SUPERFAMILY SSF52540 152 338 1.75E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 Pfam PF01018 GTP1/OBG 4 156 3.1E-53 T 14-10-2018 IPR006169 GTP1/OBG domain VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.254 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 PIRSF PIRSF002401 1 375 3.7E-135 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type VAB027_3394 8e02381b20793fe9e94d7b5066b241b3 390 Gene3D G3DSA:3.40.50.300 159 335 2.7E-51 T 14-10-2018 VAB027_1470 340f2deee969951769b8a9ad23b3ef1b 221 Pfam PF11726 Inovirus Gp2 41 207 4.2E-50 T 14-10-2018 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 Gene3D G3DSA:3.20.20.80 175 480 6.3E-115 T 14-10-2018 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 556 7.0E-265 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 Pfam PF00128 Alpha amylase, catalytic domain 33 375 1.0E-129 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 SMART SM00642 18 419 2.3E-166 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 Gene3D G3DSA:3.90.400.10 112 174 1.6E-30 T 14-10-2018 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 SUPERFAMILY SSF51011 480 558 9.89E-14 T 14-10-2018 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 Gene3D G3DSA:2.60.40.1180 481 561 3.0E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 Gene3D G3DSA:3.20.20.80 2 111 3.1E-51 T 14-10-2018 VAB027_1547 95238f631a31527a03b2cd12da16ef99 562 SUPERFAMILY SSF51445 8 475 6.83E-163 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_1747 3f37ac027ba56941d79d91f93370a966 286 SUPERFAMILY SSF54637 5 112 1.16E-39 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_1747 3f37ac027ba56941d79d91f93370a966 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.0E-95 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VAB027_1747 3f37ac027ba56941d79d91f93370a966 286 Gene3D G3DSA:3.10.129.90 2 285 7.7E-108 T 14-10-2018 VAB027_1747 3f37ac027ba56941d79d91f93370a966 286 SUPERFAMILY SSF54637 116 283 1.96E-59 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_1747 3f37ac027ba56941d79d91f93370a966 286 Pfam PF13622 Thioesterase-like superfamily 33 282 2.2E-61 T 14-10-2018 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 Gene3D G3DSA:3.40.50.150 1 198 7.9E-66 T 14-10-2018 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 SMART SM00650 25 197 1.7E-89 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 Gene3D G3DSA:1.10.8.100 200 266 9.3E-24 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.374 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 2.3E-86 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VAB027_3388 85be7aba581218e67532f22a42dcc824 271 SUPERFAMILY SSF53335 8 264 2.57E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3388 85be7aba581218e67532f22a42dcc824 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 3.3E-76 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VAB027_3728 04001058ac24138a1c1b2e95a655127a 210 Gene3D G3DSA:3.40.50.150 5 209 2.4E-66 T 14-10-2018 VAB027_3728 04001058ac24138a1c1b2e95a655127a 210 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 7.3E-62 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAB027_3728 04001058ac24138a1c1b2e95a655127a 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.141 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAB027_3728 04001058ac24138a1c1b2e95a655127a 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.1E-57 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAB027_3728 04001058ac24138a1c1b2e95a655127a 210 SUPERFAMILY SSF53335 11 208 3.41E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3728 04001058ac24138a1c1b2e95a655127a 210 PIRSF PIRSF003078 4 209 1.6E-59 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAB027_658 964ee59362fc974c0b47776a91726fd8 334 SUPERFAMILY SSF141986 170 323 1.28E-40 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VAB027_658 964ee59362fc974c0b47776a91726fd8 334 Gene3D G3DSA:3.40.50.10740 1 163 1.1E-59 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VAB027_658 964ee59362fc974c0b47776a91726fd8 334 SUPERFAMILY SSF52317 2 168 2.65E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_658 964ee59362fc974c0b47776a91726fd8 334 Pfam PF02016 LD-carboxypeptidase 13 317 3.7E-72 T 14-10-2018 IPR003507 Peptidase family S66 VAB027_658 964ee59362fc974c0b47776a91726fd8 334 Gene3D G3DSA:3.50.30.60 164 334 7.7E-49 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VAB027_658 964ee59362fc974c0b47776a91726fd8 334 PIRSF PIRSF028757 1 332 5.7E-99 T 14-10-2018 IPR003507 Peptidase family S66 VAB027_1092 82930dfd50d1face9342c268b30e685e 278 Gene3D G3DSA:3.40.190.10 131 222 8.7E-61 T 14-10-2018 VAB027_1092 82930dfd50d1face9342c268b30e685e 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 266 3.3E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1092 82930dfd50d1face9342c268b30e685e 278 SUPERFAMILY SSF53850 16 265 3.95E-57 T 14-10-2018 VAB027_1092 82930dfd50d1face9342c268b30e685e 278 Gene3D G3DSA:3.40.190.10 37 255 8.7E-61 T 14-10-2018 VAB027_1092 82930dfd50d1face9342c268b30e685e 278 SMART SM00062 45 268 1.2E-44 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 5.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Gene3D G3DSA:1.10.8.60 315 388 2.6E-20 T 14-10-2018 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 SUPERFAMILY SSF46689 388 440 7.62E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 SUPERFAMILY SSF52172 2 188 1.32E-36 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Gene3D G3DSA:1.10.10.60 389 443 6.2E-12 T 14-10-2018 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 SMART SM00448 2 114 1.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Pfam PF00158 Sigma-54 interaction domain 144 310 8.8E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 SUPERFAMILY SSF52540 144 374 1.81E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 SMART SM00382 164 308 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Gene3D G3DSA:3.40.50.300 140 314 5.6E-61 T 14-10-2018 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Pfam PF00072 Response regulator receiver domain 4 114 1.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2569 17a1850ea41ca155679a7f2db386d0d3 446 Gene3D G3DSA:3.40.50.2300 2 129 1.4E-33 T 14-10-2018 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Gene3D G3DSA:1.10.132.60 643 787 8.7E-59 T 14-10-2018 VAB027_1890 947720de2a026409f487bcb9d9622241 787 SUPERFAMILY SSF56672 385 780 6.12E-113 T 14-10-2018 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Gene3D G3DSA:3.90.1600.10 348 443 1.0E-29 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Gene3D G3DSA:3.90.1600.10 458 636 1.4E-55 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Pfam PF00136 DNA polymerase family B 377 744 4.0E-41 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Gene3D G3DSA:3.30.420.10 156 347 6.3E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1890 947720de2a026409f487bcb9d9622241 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 189 296 1.7E-13 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 SMART SM00486 153 558 1.1E-62 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Gene3D G3DSA:2.40.50.590 6 153 1.0E-35 T 14-10-2018 VAB027_1890 947720de2a026409f487bcb9d9622241 787 SUPERFAMILY SSF53098 4 389 3.29E-82 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1890 947720de2a026409f487bcb9d9622241 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_1890 947720de2a026409f487bcb9d9622241 787 Gene3D G3DSA:3.30.70.2250 41 108 1.0E-35 T 14-10-2018 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.836 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 Gene3D G3DSA:1.10.8.60 187 260 5.7E-31 T 14-10-2018 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 240 9.3E-118 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 SUPERFAMILY SSF46785 262 332 1.97E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 3.5E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 3.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 SUPERFAMILY SSF52540 25 256 6.23E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 Gene3D G3DSA:1.10.10.10 262 334 4.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 SMART SM00382 56 183 3.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 Gene3D G3DSA:3.40.50.300 25 186 4.8E-41 T 14-10-2018 VAB027_2487 1d454ed8a3172dc3fd15fb9c15307afd 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 9.9E-148 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 967 985 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 962 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 948 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1004 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SMART SM00388 788 853 1.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Pfam PF12860 PAS fold 634 748 1.8E-43 T 14-10-2018 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Gene3D G3DSA:3.40.50.2300 1019 1147 1.7E-16 T 14-10-2018 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SUPERFAMILY SSF55785 626 741 7.33E-9 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SMART SM00448 1030 1143 2.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SUPERFAMILY SSF47384 773 854 8.44E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Gene3D G3DSA:3.30.565.10 852 1008 1.2E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 1.9E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Gene3D G3DSA:1.10.287.130 748 851 2.5E-14 T 14-10-2018 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SUPERFAMILY SSF55874 842 1003 1.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Pfam PF00072 Response regulator receiver domain 1032 1143 4.0E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Gene3D G3DSA:1.20.1730.10 32 503 5.5E-7 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 Gene3D G3DSA:3.30.450.20 616 747 8.6E-12 T 14-10-2018 VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SMART SM00387 897 1007 4.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3544 2d6b3fd7aa779390991f886a25df5fc2 1147 SUPERFAMILY SSF52172 1029 1146 3.56E-18 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.10.20.30 48 362 3.5E-151 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.4E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:1.10.150.300 120 200 3.5E-151 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 7.7E-169 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 SUPERFAMILY SSF81271 279 360 7.19E-37 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 PIRSF PIRSF006641 1 363 2.1E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.40.50.300 4 278 3.5E-151 T 14-10-2018 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.477 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VAB027_2811 eecca8d9f8a54291912fbae4e8350841 363 SUPERFAMILY SSF52540 3 301 3.83E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 Gene3D G3DSA:2.40.50.100 528 594 1.5E-23 T 14-10-2018 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 Pfam PF00682 HMGL-like 6 270 8.2E-60 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 590 3.0E-268 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 SUPERFAMILY SSF51569 1 300 7.51E-89 T 14-10-2018 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 Gene3D G3DSA:3.20.20.70 1 463 1.1E-174 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 SUPERFAMILY SSF51230 521 594 2.49E-21 T 14-10-2018 IPR011053 Single hybrid motif VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 SUPERFAMILY SSF89000 297 457 3.02E-51 T 14-10-2018 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 Pfam PF02436 Conserved carboxylase domain 292 493 1.2E-58 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VAB027_3292 6ffeeecaf84e0112f5c2563b53c5af2c 595 Pfam PF00364 Biotin-requiring enzyme 529 593 4.8E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 Pfam PF00106 short chain dehydrogenase 3 181 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 SUPERFAMILY SSF51735 4 238 3.61E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1800 39d3dc990a6f10656ba1929b15d1fb62 241 Gene3D G3DSA:3.40.50.720 2 234 3.9E-43 T 14-10-2018 VAB027_2598 78b5d2b7b4350023a56d6190fa4c59bb 270 PIRSF PIRSF003092 1 270 3.9E-95 T 14-10-2018 IPR025501 ATP binding protein MinD VAB027_2598 78b5d2b7b4350023a56d6190fa4c59bb 270 Pfam PF13614 AAA domain 3 157 1.1E-19 T 14-10-2018 IPR025669 AAA domain VAB027_2598 78b5d2b7b4350023a56d6190fa4c59bb 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 3.3E-111 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VAB027_2598 78b5d2b7b4350023a56d6190fa4c59bb 270 Gene3D G3DSA:3.40.50.300 1 260 2.0E-74 T 14-10-2018 VAB027_2598 78b5d2b7b4350023a56d6190fa4c59bb 270 SUPERFAMILY SSF52540 1 268 1.22E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3562 6273b6ba19c014e729c924181943abcb 680 Pfam PF00593 TonB dependent receptor 251 679 2.4E-56 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_3562 6273b6ba19c014e729c924181943abcb 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VAB027_3562 6273b6ba19c014e729c924181943abcb 680 SUPERFAMILY SSF56935 18 680 3.41E-125 T 14-10-2018 VAB027_3562 6273b6ba19c014e729c924181943abcb 680 Gene3D G3DSA:2.170.130.10 34 155 5.7E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_3562 6273b6ba19c014e729c924181943abcb 680 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 680 4.6E-108 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VAB027_3562 6273b6ba19c014e729c924181943abcb 680 Gene3D G3DSA:2.40.170.20 156 680 4.3E-110 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_3562 6273b6ba19c014e729c924181943abcb 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 4.8E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.50.50.60 158 276 2.2E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PIRSF PIRSF000350 1 463 1.3E-70 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.5E-29 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.2E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 SUPERFAMILY SSF51905 2 323 4.04E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.2E-27 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 3.2E-27 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.2E-27 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-27 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-27 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.8E-49 T 14-10-2018 VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.50.50.60 7 333 2.2E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_129 2dd93a9c4391e7ae627d71e8dc3b7860 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.905 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VAB027_401 d5df50f48ecebbfa9aebcffded9207d7 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 246 42.889 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VAB027_401 d5df50f48ecebbfa9aebcffded9207d7 246 Gene3D G3DSA:3.20.20.370 1 246 3.2E-102 T 14-10-2018 VAB027_401 d5df50f48ecebbfa9aebcffded9207d7 246 SUPERFAMILY SSF88713 5 245 4.37E-94 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VAB027_401 d5df50f48ecebbfa9aebcffded9207d7 246 Pfam PF03746 LamB/YcsF family 6 245 4.8E-98 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VAB027_1326 95127babaaae536020ed9a4eedc1c6c3 210 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 6.1E-57 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VAB027_1326 95127babaaae536020ed9a4eedc1c6c3 210 SUPERFAMILY SSF52507 5 201 3.92E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAB027_1326 95127babaaae536020ed9a4eedc1c6c3 210 Pfam PF02441 Flavoprotein 6 181 2.8E-24 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VAB027_1326 95127babaaae536020ed9a4eedc1c6c3 210 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 34.967 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VAB027_1326 95127babaaae536020ed9a4eedc1c6c3 210 Gene3D G3DSA:3.40.50.1950 1 203 4.5E-77 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAB027_1453 f31964921488dd86ac66c3e6a7ce4ae5 313 Gene3D G3DSA:1.10.4200.10 58 307 1.2E-10 T 14-10-2018 VAB027_1453 f31964921488dd86ac66c3e6a7ce4ae5 313 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 313 171.648 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VAB027_1453 f31964921488dd86ac66c3e6a7ce4ae5 313 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 34 302 1.1E-84 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VAB027_1453 f31964921488dd86ac66c3e6a7ce4ae5 313 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 32 304 2.6E-116 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VAB027_3606 f82e304b1bacb6d4fcc9982e23ec591c 344 Pfam PF13808 DDE_Tnp_1-associated 1 64 2.0E-16 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal VAB027_3606 f82e304b1bacb6d4fcc9982e23ec591c 344 Pfam PF01609 Transposase DDE domain 72 311 3.0E-33 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_1958 4f05650b65cbb5b4d6add13a7b9a8d68 335 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 310 7.7E-77 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VAB027_1958 4f05650b65cbb5b4d6add13a7b9a8d68 335 Pfam PF02378 Phosphotransferase system, EIIC 32 312 5.0E-53 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 Gene3D G3DSA:1.10.10.10 1 87 1.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 Pfam PF03466 LysR substrate binding domain 94 287 2.9E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 Gene3D G3DSA:3.40.190.290 95 289 3.2E-13 T 14-10-2018 VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 SUPERFAMILY SSF46785 1 85 8.62E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 SUPERFAMILY SSF53850 94 289 4.75E-22 T 14-10-2018 VAB027_2220 a524ec89d30a5eda39fe20b9a6320842 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 Gene3D G3DSA:2.40.50.100 57 217 3.6E-53 T 14-10-2018 VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 SUPERFAMILY SSF111369 50 233 8.63E-16 T 14-10-2018 VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 2.9E-34 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 Gene3D G3DSA:1.10.287.470 91 177 3.6E-53 T 14-10-2018 VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 257 5.5E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 Gene3D G3DSA:2.40.420.20 41 367 3.6E-53 T 14-10-2018 VAB027_2205 7ea22560a53f6d93b3244253464b48a5 377 Gene3D G3DSA:2.40.30.170 46 307 3.6E-53 T 14-10-2018 VAB027_2367 7f81e96960d617149348fedbb6b7298c 195 Gene3D G3DSA:1.10.150.20 115 195 2.6E-24 T 14-10-2018 VAB027_2367 7f81e96960d617149348fedbb6b7298c 195 PIRSF PIRSF028788 1 195 2.7E-48 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VAB027_2367 7f81e96960d617149348fedbb6b7298c 195 Pfam PF04994 TfoX C-terminal domain 115 194 1.6E-32 T 14-10-2018 IPR007077 TfoX, C-terminal VAB027_2367 7f81e96960d617149348fedbb6b7298c 195 Pfam PF04993 TfoX N-terminal domain 12 103 3.5E-30 T 14-10-2018 IPR007076 TfoX, N-terminal VAB027_2367 7f81e96960d617149348fedbb6b7298c 195 SUPERFAMILY SSF159894 6 103 3.92E-31 T 14-10-2018 VAB027_2367 7f81e96960d617149348fedbb6b7298c 195 Gene3D G3DSA:3.30.1460.30 1 105 3.8E-37 T 14-10-2018 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3874 3890 0.14 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3857 3873 0.019 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3820 3836 1.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3838 3854 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 SUPERFAMILY SSF141072 304 421 4.71E-12 T 14-10-2018 IPR038081 CalX-like domain superfamily VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 SUPERFAMILY SSF53300 3370 3571 7.69E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 SUPERFAMILY SSF51120 3785 3964 3.27E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3862 3880 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3853 3871 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Gene3D G3DSA:3.40.50.410 3366 3573 3.4E-19 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 PRINTS PR00313 NodO calcium binding signature 3836 3847 8.5E-8 T 14-10-2018 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 PRINTS PR00313 NodO calcium binding signature 3875 3883 8.5E-8 T 14-10-2018 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 PRINTS PR00313 NodO calcium binding signature 3866 3874 8.5E-8 T 14-10-2018 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 PRINTS PR00313 NodO calcium binding signature 3884 3893 8.5E-8 T 14-10-2018 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Gene3D G3DSA:2.60.40.2030 304 425 1.7E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3903 3977 2.5E-9 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 SMART SM00327 3370 3569 1.3E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 SUPERFAMILY SSF141072 170 290 5.23E-9 T 14-10-2018 IPR038081 CalX-like domain superfamily VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2651 2750 1.1E-23 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1111 1210 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1331 1430 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 451 550 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 671 770 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2211 2310 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2431 2530 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1551 1650 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1771 1870 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1991 2090 1.4E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 891 990 1.4E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1001 1100 1.4E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1221 1320 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 561 660 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 781 880 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2101 2200 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2321 2420 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2541 2640 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1881 1980 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1441 1540 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1661 1760 2.2E-24 T 14-10-2018 IPR010221 VCBS repeat VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF13519 von Willebrand factor type A domain 3375 3490 4.2E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF03160 Calx-beta domain 243 272 6.9 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 Pfam PF03160 Calx-beta domain 309 403 5.9E-4 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VAB027_2268 632d213fabe2e2207e2acbb55ee6c7b4 3982 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3871 3889 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SUPERFAMILY SSF47807 171 290 9.12E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Gene3D G3DSA:1.20.1060.10 548 663 5.6E-42 T 14-10-2018 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Gene3D G3DSA:3.40.50.1010 9 284 5.0E-96 T 14-10-2018 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SUPERFAMILY SSF56672 527 934 6.34E-160 T 14-10-2018 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SMART SM00482 691 898 6.4E-117 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SUPERFAMILY SSF53098 338 523 1.59E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Pfam PF01612 3'-5' exonuclease 335 521 2.5E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Gene3D G3DSA:1.10.150.20 714 857 1.2E-113 T 14-10-2018 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Gene3D G3DSA:3.30.70.370 669 930 1.2E-113 T 14-10-2018 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 698 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 682 2.4E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 TIGRFAM TIGR00593 pola: DNA polymerase I 9 934 1.8E-285 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SMART SM00475 7 267 2.3E-126 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.9E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Gene3D G3DSA:1.10.150.20 174 253 5.0E-96 T 14-10-2018 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SUPERFAMILY SSF88723 7 170 1.08E-56 T 14-10-2018 IPR029060 PIN-like domain superfamily VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.8E-30 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SMART SM00279 173 208 7.2E-14 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Gene3D G3DSA:3.30.420.10 332 547 3.9E-69 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 Pfam PF00476 DNA polymerase family A 557 931 1.4E-156 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_94 65bf57b333f50371621d6858fc89bbab 934 SMART SM00474 335 522 1.1E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAB027_3239 3ccef0c5d6881f80e1653d2ef9445aa0 541 SUPERFAMILY SSF161098 281 535 2.62E-38 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3239 3ccef0c5d6881f80e1653d2ef9445aa0 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 2.5E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3239 3ccef0c5d6881f80e1653d2ef9445aa0 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 347 528 8.0E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3239 3ccef0c5d6881f80e1653d2ef9445aa0 541 Gene3D G3DSA:1.10.3720.10 8 267 2.8E-55 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3239 3ccef0c5d6881f80e1653d2ef9445aa0 541 SUPERFAMILY SSF161098 5 255 6.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3239 3ccef0c5d6881f80e1653d2ef9445aa0 541 Gene3D G3DSA:1.10.3720.10 284 541 8.6E-34 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 Gene3D G3DSA:1.10.10.10 113 176 2.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 Pfam PF04542 Sigma-70 region 2 29 95 1.8E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 Pfam PF08281 Sigma-70, region 4 119 171 4.4E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 8.5E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 SUPERFAMILY SSF88659 116 176 1.57E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 Gene3D G3DSA:1.10.1740.10 10 91 8.4E-18 T 14-10-2018 VAB027_1726 f3caeb09cb4eda99d75c64b9376e1b11 187 SUPERFAMILY SSF88946 23 108 6.28E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 SUPERFAMILY SSF51161 293 401 2.5E-20 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 Pfam PF00483 Nucleotidyl transferase 6 273 3.1E-62 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 2.2E-151 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 SUPERFAMILY SSF53448 4 357 4.22E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 Gene3D G3DSA:3.90.550.10 2 286 2.9E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 49.988 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_2372 3a128bdb915b6c7a8cd939a4bf622afe 405 Gene3D G3DSA:2.160.10.10 287 403 2.2E-34 T 14-10-2018 VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 Gene3D G3DSA:3.40.50.300 19 287 1.0E-49 T 14-10-2018 VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 Gene3D G3DSA:3.40.50.300 445 636 2.2E-37 T 14-10-2018 VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 SUPERFAMILY SSF52540 16 602 1.09E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 SUPERFAMILY SSF52540 189 598 1.74E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 SMART SM00487 17 302 0.0029 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 Pfam PF13307 Helicase C-terminal domain 462 619 7.3E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAB027_2625 cafc485ed1535f9e57d7fffbf6e47110 646 SMART SM00491 477 606 7.9E-47 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 Gene3D G3DSA:3.40.50.2300 371 476 8.7E-36 T 14-10-2018 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 SUPERFAMILY SSF52794 384 471 1.44E-24 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 461 4.7E-9 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 Gene3D G3DSA:3.40.930.10 501 646 2.7E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.6E-170 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 Pfam PF02378 Phosphotransferase system, EIIC 18 278 5.7E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 SUPERFAMILY SSF55804 505 643 2.09E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 644 3.8E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_1089 313196bbe3f54e71355ad8ab549df9dd 649 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 549 565 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_3517 22d267805122cefe4a95e69e97d72560 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.717 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VAB027_3517 22d267805122cefe4a95e69e97d72560 233 Gene3D G3DSA:3.40.50.790 68 159 7.9E-79 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VAB027_3517 22d267805122cefe4a95e69e97d72560 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3517 22d267805122cefe4a95e69e97d72560 233 Gene3D G3DSA:3.30.190.20 21 225 7.9E-79 T 14-10-2018 VAB027_3517 22d267805122cefe4a95e69e97d72560 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 6.2E-105 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VAB027_3517 22d267805122cefe4a95e69e97d72560 233 SUPERFAMILY SSF56808 6 226 3.14E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like VAB027_3517 22d267805122cefe4a95e69e97d72560 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.7E-50 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VAB027_3517 22d267805122cefe4a95e69e97d72560 233 PIRSF PIRSF002155 1 227 3.0E-77 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1314 5413a17f266d2469e623dd5ea1b38035 419 Pfam PF12704 MacB-like periplasmic core domain 20 259 3.1E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VAB027_1314 5413a17f266d2469e623dd5ea1b38035 419 Pfam PF02687 FtsX-like permease family 317 410 6.0E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 Gene3D G3DSA:3.30.450.20 49 266 1.2E-72 T 14-10-2018 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 SMART SM00304 292 346 1.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 Pfam PF02743 Cache domain 33 254 5.1E-31 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 SUPERFAMILY SSF103190 98 184 1.78E-17 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 Gene3D G3DSA:1.10.287.950 292 623 4.5E-70 T 14-10-2018 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 Gene3D G3DSA:3.30.450.20 62 173 1.2E-72 T 14-10-2018 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 SUPERFAMILY SSF58104 314 621 7.59E-75 T 14-10-2018 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 589 2.4E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2789 0080bd90fad959a46e90ce407d428f2d 623 SMART SM00283 361 622 9.3E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Gene3D G3DSA:1.25.50.10 545 867 4.3E-115 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Pfam PF01433 Peptidase family M1 domain 207 435 2.1E-57 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 3.1E-114 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 SUPERFAMILY SSF63737 3 192 7.59E-46 T 14-10-2018 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Gene3D G3DSA:2.60.40.1730 15 193 3.9E-72 T 14-10-2018 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Gene3D G3DSA:1.10.1740.60 194 278 5.5E-39 T 14-10-2018 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 SUPERFAMILY SSF55486 203 449 3.48E-74 T 14-10-2018 VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Gene3D G3DSA:2.60.40.1840 443 544 6.8E-35 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Gene3D G3DSA:1.10.390.10 279 442 4.4E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VAB027_2141 7c9da3baba809e3e981e97b7aad43e51 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 543 7.8E-33 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VAB027_3125 5bda198096f3e7a51ff82eaca9d8ed53 240 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 238 6.0E-63 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VAB027_3125 5bda198096f3e7a51ff82eaca9d8ed53 240 SUPERFAMILY SSF64438 2 239 1.41E-85 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VAB027_3125 5bda198096f3e7a51ff82eaca9d8ed53 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 237 1.5E-75 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VAB027_3125 5bda198096f3e7a51ff82eaca9d8ed53 240 Gene3D G3DSA:3.60.140.10 1 240 1.0E-90 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.1E-141 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.5E-62 T 14-10-2018 IPR016040 NAD(P)-binding domain VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 SUPERFAMILY SSF51735 1 335 9.66E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.0E-5 T 14-10-2018 VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.0E-5 T 14-10-2018 VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.0E-5 T 14-10-2018 VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 Gene3D G3DSA:3.90.25.10 193 328 1.0E-139 T 14-10-2018 VAB027_402 bc65aef1d0fdb19b3dc687403c97226c 338 Gene3D G3DSA:3.40.50.720 3 273 1.0E-139 T 14-10-2018 VAB027_1451 97a8c6071923fc396458d266739e732f 490 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 23 487 2.3E-267 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VAB027_1451 97a8c6071923fc396458d266739e732f 490 SUPERFAMILY SSF100950 2 218 2.58E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_1451 97a8c6071923fc396458d266739e732f 490 Gene3D G3DSA:3.40.1080.10 1 218 2.1E-97 T 14-10-2018 VAB027_1451 97a8c6071923fc396458d266739e732f 490 SUPERFAMILY SSF100950 221 487 1.4E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_1451 97a8c6071923fc396458d266739e732f 490 Gene3D G3DSA:3.40.1080.10 220 489 4.4E-125 T 14-10-2018 VAB027_1451 97a8c6071923fc396458d266739e732f 490 PIRSF PIRSF009451 3 489 3.2E-266 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VAB027_1451 97a8c6071923fc396458d266739e732f 490 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 17 488 5.6E-236 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VAB027_3526 a87c99a01388662d9f027caec3a209f1 307 SUPERFAMILY SSF52540 2 307 1.23E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3526 a87c99a01388662d9f027caec3a209f1 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 181.579 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VAB027_3526 a87c99a01388662d9f027caec3a209f1 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 1.2E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VAB027_3526 a87c99a01388662d9f027caec3a209f1 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 239 1.1E-13 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VAB027_3526 a87c99a01388662d9f027caec3a209f1 307 Gene3D G3DSA:3.40.50.300 1 307 3.6E-92 T 14-10-2018 VAB027_3526 a87c99a01388662d9f027caec3a209f1 307 PIRSF PIRSF000545 1 307 1.1E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 13 252 1.6E-99 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 13 229 1.2E-47 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 SUPERFAMILY SSF56534 2 255 7.06E-98 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 Gene3D G3DSA:1.10.800.10 1 263 3.4E-100 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.3E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.3E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAB027_358 9852e5b4766c9c1b60420cd1e07f050c 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.3E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 Pfam PF12833 Helix-turn-helix domain 971 1046 3.4E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1001 1042 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 Gene3D G3DSA:1.10.10.60 942 1051 7.0E-30 T 14-10-2018 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 Gene3D G3DSA:3.30.565.10 776 896 2.3E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1030 1046 6.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1015 1030 6.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 SUPERFAMILY SSF63829 280 495 4.58E-8 T 14-10-2018 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 Gene3D G3DSA:2.130.10.10 168 395 6.4E-29 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 SMART SM00342 964 1046 7.8E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 SUPERFAMILY SSF46689 1000 1047 3.32E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 SUPERFAMILY SSF63829 63 293 9.81E-7 T 14-10-2018 VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 Gene3D G3DSA:2.60.40.10 552 669 5.8E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2716 c294350ac991c8114e92376a01f0fa52 1051 Gene3D G3DSA:2.130.10.10 396 551 1.7E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 Gene3D G3DSA:3.30.450.20 390 528 1.7E-5 T 14-10-2018 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 SUPERFAMILY SSF47384 559 630 7.85E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 742 1.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 728 1.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 761 1.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 Gene3D G3DSA:1.10.287.130 539 626 1.8E-18 T 14-10-2018 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 SMART SM00304 344 396 3.4E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 675 782 7.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 Pfam PF00512 His Kinase A (phospho-acceptor) domain 565 629 6.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 Gene3D G3DSA:3.30.565.10 632 788 4.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 SMART SM00388 563 631 2.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 SUPERFAMILY SSF55874 622 779 8.38E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 PIRSF PIRSF037119 1 785 0.0 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB VAB027_472 f85c6946a8830d4eaba4be92840ebd34 789 SMART SM00387 674 783 4.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1618 c876bcba8de12903b3c8e654fdf975d8 390 Gene3D G3DSA:1.50.10.20 173 376 3.2E-6 T 14-10-2018 VAB027_1618 c876bcba8de12903b3c8e654fdf975d8 390 SUPERFAMILY SSF48239 78 379 4.45E-21 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 SUPERFAMILY SSF52172 3 136 1.35E-6 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 SMART SM00387 528 641 2.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 SUPERFAMILY SSF51206 201 310 1.1E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 Gene3D G3DSA:3.40.50.2300 2 139 2.5E-7 T 14-10-2018 VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.8E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.8E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.8E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 SUPERFAMILY SSF47384 335 378 1.35E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 3.4E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 381 1.4E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 Gene3D G3DSA:2.60.120.10 176 317 8.2E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 SUPERFAMILY SSF55874 481 640 3.8E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 Gene3D G3DSA:3.30.565.10 492 643 2.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1837 0405da5c6aa57d8b9bf592d1c8f8225e 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 639 3.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3369 99cd49b122a62810e7ad9c94c65c2598 306 Gene3D G3DSA:3.40.710.10 1 306 3.8E-111 T 14-10-2018 VAB027_3369 99cd49b122a62810e7ad9c94c65c2598 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 2.3E-131 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VAB027_3369 99cd49b122a62810e7ad9c94c65c2598 306 SUPERFAMILY SSF56601 4 306 1.16E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_3369 99cd49b122a62810e7ad9c94c65c2598 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.363 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VAB027_3369 99cd49b122a62810e7ad9c94c65c2598 306 Pfam PF04960 Glutaminase 22 306 1.5E-112 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VAB027_739 f018780864cadcb43edc0cf023e7d4d2 105 SUPERFAMILY SSF47413 12 89 3.85E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_739 f018780864cadcb43edc0cf023e7d4d2 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 83 9.6E-29 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 VAB027_739 f018780864cadcb43edc0cf023e7d4d2 105 Gene3D G3DSA:1.10.260.40 1 102 7.0E-27 T 14-10-2018 VAB027_739 f018780864cadcb43edc0cf023e7d4d2 105 Pfam PF01381 Helix-turn-helix 19 68 2.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_739 f018780864cadcb43edc0cf023e7d4d2 105 SMART SM00530 14 69 1.5E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1345 0e9eaaaae1f70bbf4d87e3817e5ee59f 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 10 261 7.3E-99 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VAB027_1345 0e9eaaaae1f70bbf4d87e3817e5ee59f 263 Pfam PF02405 Permease MlaE 47 259 2.3E-75 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.615 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 Gene3D G3DSA:3.30.70.260 125 196 3.9E-79 T 14-10-2018 VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 Gene3D G3DSA:3.40.50.1360 7 207 3.9E-79 T 14-10-2018 VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 SUPERFAMILY SSF100950 1 146 1.58E-47 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 SUPERFAMILY SSF75445 127 198 1.31E-23 T 14-10-2018 VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 5.7E-68 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VAB027_3104 c542c0ecfd307d89c93920fcfb1a17fa 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.7E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VAB027_2940 08a9d092d695211e785a8d24341ca85e 226 Pfam PF13490 Putative zinc-finger 9 37 2.9E-5 T 14-10-2018 IPR027383 Putative zinc-finger VAB027_2940 08a9d092d695211e785a8d24341ca85e 226 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 223 2.7E-93 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative VAB027_2940 08a9d092d695211e785a8d24341ca85e 226 Pfam PF12973 ChrR Cupin-like domain 121 200 1.0E-12 T 14-10-2018 IPR025979 ChrR-like cupin domain VAB027_2940 08a9d092d695211e785a8d24341ca85e 226 Gene3D G3DSA:1.10.10.1320 1 112 6.5E-18 T 14-10-2018 VAB027_2940 08a9d092d695211e785a8d24341ca85e 226 Gene3D G3DSA:2.60.120.10 114 204 1.2E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_2940 08a9d092d695211e785a8d24341ca85e 226 SUPERFAMILY SSF51182 115 210 4.7E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.399 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 Gene3D G3DSA:3.40.50.720 266 562 1.2E-109 T 14-10-2018 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 SMART SM01274 78 258 3.5E-107 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 SUPERFAMILY SSF53223 4 267 5.76E-109 T 14-10-2018 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 SMART SM00919 268 528 5.2E-133 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PIRSF PIRSF000106 2 560 4.3E-225 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.2E-104 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 144 173 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 264 280 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 84 108 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 295 311 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 180 202 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 239 257 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 PRINTS PR00072 Malic enzyme signature 405 421 2.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 Gene3D G3DSA:3.40.50.10380 13 265 6.1E-115 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.9E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAB027_1867 fe86aa131a1e11ddf234b73e19db647a 562 SUPERFAMILY SSF51735 268 559 2.93E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 4.9E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 8.9E-12 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF51344 5 87 7.06E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 4.0E-42 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.433 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF46604 89 138 3.66E-14 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:2.60.15.10 4 91 1.4E-30 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 2.0E-40 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3717 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:1.20.5.440 92 135 5.0E-19 T 14-10-2018 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 6.3E-115 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 SMART SM01130 1 290 3.4E-135 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.978 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 SUPERFAMILY SSF51569 2 288 4.71E-96 T 14-10-2018 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 2.5E-106 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 Gene3D G3DSA:3.20.20.70 1 291 5.6E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2786 818bb5a9164a82d261d9edb3428a92c5 292 PIRSF PIRSF001365 1 290 2.5E-88 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_306 4fc6487fa623eab1dd2ea81ab7e0a592 117 Gene3D G3DSA:2.30.30.110 1 116 4.7E-34 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VAB027_306 4fc6487fa623eab1dd2ea81ab7e0a592 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 106 7.3E-21 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 VAB027_306 4fc6487fa623eab1dd2ea81ab7e0a592 117 SUPERFAMILY SSF50118 1 109 1.66E-31 T 14-10-2018 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 489 565 1.4E-15 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 7.9E-162 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 SUPERFAMILY SSF50475 3 322 9.81E-124 T 14-10-2018 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 SUPERFAMILY SSF143968 490 611 5.23E-28 T 14-10-2018 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 Gene3D G3DSA:1.20.5.570 585 613 6.6E-16 T 14-10-2018 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.2E-163 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 SUPERFAMILY SSF143968 323 459 7.72E-51 T 14-10-2018 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 Gene3D G3DSA:3.40.1670.10 337 453 1.1E-42 T 14-10-2018 VAB027_3538 7eba86d7e7220a8bf4fb97b179a6e99f 613 Gene3D G3DSA:3.40.1670.10 486 584 1.6E-19 T 14-10-2018 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Gene3D G3DSA:3.40.120.10 175 363 6.9E-61 T 14-10-2018 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 6.4E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 SUPERFAMILY SSF53738 157 257 7.06E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Gene3D G3DSA:3.30.310.50 371 446 1.8E-25 T 14-10-2018 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 SUPERFAMILY SSF53738 259 366 6.28E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 3.9E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.994 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 1.7E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Gene3D G3DSA:3.40.120.10 258 340 6.9E-61 T 14-10-2018 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 SUPERFAMILY SSF53738 4 182 4.32E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Gene3D G3DSA:3.40.120.10 4 155 3.0E-48 T 14-10-2018 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 9.1E-207 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 8.6E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3210 c24180d681d4f6af2162d537d16dbf4b 446 SUPERFAMILY SSF55957 358 445 1.31E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_505 cfa0833bbd662b4728db0c0d119b0091 186 Gene3D G3DSA:1.10.150.240 9 75 4.9E-41 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_505 cfa0833bbd662b4728db0c0d119b0091 186 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 113 174 1.7E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_505 cfa0833bbd662b4728db0c0d119b0091 186 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 1 174 1.1E-49 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VAB027_505 cfa0833bbd662b4728db0c0d119b0091 186 SUPERFAMILY SSF56784 1 179 1.8E-41 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_505 cfa0833bbd662b4728db0c0d119b0091 186 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 174 4.0E-24 T 14-10-2018 VAB027_505 cfa0833bbd662b4728db0c0d119b0091 186 Gene3D G3DSA:3.40.50.1000 1 176 4.9E-41 T 14-10-2018 IPR023214 HAD superfamily VAB027_2864 8615260df439fb88fe0b51419eb435e5 192 SUPERFAMILY SSF160443 92 174 1.15E-14 T 14-10-2018 IPR036063 Smr domain superfamily VAB027_2864 8615260df439fb88fe0b51419eb435e5 192 Gene3D G3DSA:3.30.1370.110 47 180 3.4E-43 T 14-10-2018 VAB027_2864 8615260df439fb88fe0b51419eb435e5 192 Pfam PF01713 Smr domain 94 174 8.8E-21 T 14-10-2018 IPR002625 Smr domain VAB027_2864 8615260df439fb88fe0b51419eb435e5 192 SMART SM00463 91 174 4.4E-12 T 14-10-2018 IPR002625 Smr domain VAB027_3504 2eb22c32b147ed10c8b8947dbd37db7b 295 SUPERFAMILY SSF103481 214 294 2.48E-9 T 14-10-2018 VAB027_3504 2eb22c32b147ed10c8b8947dbd37db7b 295 SUPERFAMILY SSF103481 36 140 1.16E-11 T 14-10-2018 VAB027_3504 2eb22c32b147ed10c8b8947dbd37db7b 295 Pfam PF00892 EamA-like transporter family 157 294 4.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_3504 2eb22c32b147ed10c8b8947dbd37db7b 295 Pfam PF00892 EamA-like transporter family 4 135 2.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 515 3.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 SMART SM00304 218 271 9.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 189 3.3E-15 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 Gene3D G3DSA:1.10.287.950 217 548 8.9E-70 T 14-10-2018 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 SUPERFAMILY SSF58104 240 548 2.09E-75 T 14-10-2018 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 SMART SM00283 286 547 8.3E-98 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 3.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 21 46 3.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_825 ff45f1f8bd926498da9f3b5eed9d0d7e 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 3.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1663 d760934fa76c3bfcf8f29fa117b8420c 149 Gene3D G3DSA:2.40.50.140 78 149 1.6E-10 T 14-10-2018 VAB027_1663 d760934fa76c3bfcf8f29fa117b8420c 149 SUPERFAMILY SSF141322 92 148 6.15E-7 T 14-10-2018 VAB027_1663 d760934fa76c3bfcf8f29fa117b8420c 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 4.3E-24 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 SUPERFAMILY SSF117892 53 187 2.75E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.4E-33 T 14-10-2018 IPR001107 Band 7 domain VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 132 155 2.0E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 156 174 2.0E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 77 98 2.0E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 112 129 2.0E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 175 196 2.0E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 SMART SM00244 22 180 3.6E-59 T 14-10-2018 IPR001107 Band 7 domain VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 Pfam PF16200 C-terminal region of band_7 242 302 5.9E-7 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 Gene3D G3DSA:3.30.479.30 50 182 3.5E-43 T 14-10-2018 VAB027_1664 abfae0b0a3146757063e09fdcbe130f9 306 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 SUPERFAMILY SSF46785 1 86 4.15E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 Gene3D G3DSA:1.10.10.10 1 83 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 Pfam PF03466 LysR substrate binding domain 89 287 1.5E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 Gene3D G3DSA:3.40.190.290 90 289 1.0E-49 T 14-10-2018 VAB027_2265 8b79160e3f1a6d179bb26a086fa483a3 289 SUPERFAMILY SSF53850 89 288 2.41E-40 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.3E-13 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.3E-13 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.3E-13 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 SUPERFAMILY SSF52317 1 192 4.76E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 2.4E-86 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 Gene3D G3DSA:3.40.50.880 1 193 1.2E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-5 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-5 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 Pfam PF00117 Glutamine amidotransferase class-I 4 190 2.0E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.6E-36 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.6E-36 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.6E-36 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.6E-36 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.6E-36 T 14-10-2018 VAB027_271 e7eb6eec11c85d64b43e628ff037d079 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.6E-36 T 14-10-2018 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 Gene3D G3DSA:3.30.450.20 2 112 1.3E-25 T 14-10-2018 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 Gene3D G3DSA:1.10.287.130 114 191 1.4E-13 T 14-10-2018 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 Pfam PF00989 PAS fold 7 102 2.0E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 SUPERFAMILY SSF55874 197 347 7.33E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 SMART SM00388 129 194 1.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 7.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 SUPERFAMILY SSF55785 17 121 4.19E-8 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 SMART SM00387 233 350 2.7E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 Gene3D G3DSA:3.30.565.10 192 348 2.4E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 SUPERFAMILY SSF47384 125 192 4.51E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 SMART SM00091 4 72 5.2E-6 T 14-10-2018 IPR000014 PAS domain VAB027_146 b59b4194ba1e1529ffca460d803ef408 352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 190 2.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_952 23bbae934314c5deda8528445451d147 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 358 9.3E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_952 23bbae934314c5deda8528445451d147 366 Gene3D G3DSA:3.30.70.270 206 364 9.8E-41 T 14-10-2018 VAB027_952 23bbae934314c5deda8528445451d147 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 359 8.4E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_952 23bbae934314c5deda8528445451d147 366 SUPERFAMILY SSF55073 216 360 2.98E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_952 23bbae934314c5deda8528445451d147 366 SMART SM00267 200 365 1.8E-34 T 14-10-2018 IPR000160 GGDEF domain VAB027_2480 7e32598b38f75cbb883b50ce62377879 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.073 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VAB027_2480 7e32598b38f75cbb883b50ce62377879 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 145 8.5E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VAB027_2480 7e32598b38f75cbb883b50ce62377879 146 Gene3D G3DSA:3.30.420.270 63 136 3.4E-18 T 14-10-2018 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 SUPERFAMILY SSF53901 3 315 2.03E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.028 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 7.1E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 Gene3D G3DSA:3.40.47.10 1 170 9.3E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 7.9E-145 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 Gene3D G3DSA:3.40.47.10 171 316 1.4E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2660 36a0db324e3954158761e8c9fdba0cb1 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.4E-31 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_229 c0351f1a9e7b1f034531f06eaaea0710 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.9E-7 T 14-10-2018 VAB027_229 c0351f1a9e7b1f034531f06eaaea0710 205 SUPERFAMILY SSF46785 4 183 9.42E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_229 c0351f1a9e7b1f034531f06eaaea0710 205 Gene3D G3DSA:1.10.10.10 2 86 6.0E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:3.40.190.10 164 267 2.6E-65 T 14-10-2018 VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:1.10.10.10 1 85 2.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 Pfam PF03466 LysR substrate binding domain 89 293 9.0E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:3.40.190.10 91 281 2.6E-65 T 14-10-2018 VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 SUPERFAMILY SSF46785 1 85 8.82E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_254 e3a44274f5b4c45de5c67f58002e4bfb 297 SUPERFAMILY SSF53850 87 295 4.07E-40 T 14-10-2018 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SMART SM00846 3 150 1.3E-97 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.3E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.3E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.3E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.3E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.3E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.2E-138 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Gene3D G3DSA:3.40.50.720 4 326 8.8E-158 T 14-10-2018 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SUPERFAMILY SSF55347 149 312 9.67E-81 T 14-10-2018 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Gene3D G3DSA:3.30.360.10 149 314 8.8E-158 T 14-10-2018 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.7E-71 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PIRSF PIRSF000149 1 331 6.0E-137 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.2E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2634 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SUPERFAMILY SSF51735 3 166 5.46E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2526 ccb947c34d1f15c8a196d1d0b4cfdd7e 414 Pfam PF02687 FtsX-like permease family 301 407 4.8E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_2526 ccb947c34d1f15c8a196d1d0b4cfdd7e 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 8.0E-158 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VAB027_2526 ccb947c34d1f15c8a196d1d0b4cfdd7e 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 1.2E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VAB027_2526 ccb947c34d1f15c8a196d1d0b4cfdd7e 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 3.2E-209 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 SUPERFAMILY SSF52374 16 179 1.48E-33 T 14-10-2018 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 PIRSF PIRSF004491 1 313 5.7E-108 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 Pfam PF01687 Riboflavin kinase 184 306 4.8E-38 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.0E-105 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 Gene3D G3DSA:3.40.50.620 1 185 4.5E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 Gene3D G3DSA:2.40.30.30 186 320 7.0E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 SUPERFAMILY SSF82114 175 310 3.27E-44 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 Pfam PF06574 FAD synthetase 11 167 8.1E-60 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VAB027_3166 bf079b3c1f983dc0161863c8ec58f426 322 SMART SM00904 183 307 1.2E-65 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 640 8.4E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 9.6E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Gene3D G3DSA:1.10.268.10 371 456 4.7E-179 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 SUPERFAMILY SSF101904 499 743 8.76E-53 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 SUPERFAMILY SSF56719 33 485 1.83E-155 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Gene3D G3DSA:2.120.10.90 502 748 2.7E-16 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.872 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 SMART SM00434 13 463 2.8E-234 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Gene3D G3DSA:3.90.199.10 34 483 4.7E-179 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 5.7E-136 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 Gene3D G3DSA:3.30.1360.40 240 333 4.7E-179 T 14-10-2018 VAB027_3056 e7b9244b653ffb023cc41e931810e7b6 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 14-10-2018 VAB027_3516 c71d8d323568f3585c8f87f14d127938 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3516 c71d8d323568f3585c8f87f14d127938 162 Pfam PF00466 Ribosomal protein L10 5 101 1.8E-26 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VAB027_3516 c71d8d323568f3585c8f87f14d127938 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.936 T 14-10-2018 IPR022973 Ribosomal protein L10 VAB027_3516 c71d8d323568f3585c8f87f14d127938 162 SUPERFAMILY SSF160369 4 158 4.71E-44 T 14-10-2018 VAB027_3516 c71d8d323568f3585c8f87f14d127938 162 Gene3D G3DSA:3.30.70.1730 1 124 6.2E-34 T 14-10-2018 VAB027_170 e297cf20b04db49af03b7e72e8ecf89b 252 ProSitePatterns PS01142 Bacterial type II secretion system protein N signature. 45 67 - T 14-10-2018 IPR000645 Type II secretion system protein N, conserved site GO:0008565|GO:0015627|GO:0015628 VAB027_170 e297cf20b04db49af03b7e72e8ecf89b 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 1.9E-60 T 14-10-2018 IPR022792 Type II secretion system, protein N VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 Pfam PF00202 Aminotransferase class-III 22 399 4.0E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 PIRSF PIRSF000521 24 157 6.4E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 PIRSF PIRSF000521 173 402 2.6E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 2.3E-209 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 Gene3D G3DSA:3.40.640.10 59 304 3.8E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 SUPERFAMILY SSF53383 16 399 2.45E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 Gene3D G3DSA:3.90.1150.10 29 392 3.8E-148 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 6.9E-149 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VAB027_272 81e6fd62e3eee106cadf2365eb00f30e 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 68.846 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 Pfam PF02163 Peptidase family M50 10 440 2.0E-86 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 SMART SM00228 115 186 0.044 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 SMART SM00228 212 281 5.4E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 5.6E-139 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 227 277 4.7E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 Gene3D G3DSA:2.30.42.10 126 221 5.7E-32 T 14-10-2018 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 SUPERFAMILY SSF50156 196 291 3.81E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 SUPERFAMILY SSF50156 91 184 6.18E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_2894 5a9bbf2205759cbd1a94477f1824dcda 452 Gene3D G3DSA:2.30.42.10 223 313 5.1E-19 T 14-10-2018 VAB027_1162 5c64e237a496e51bf7d5e97c554bfbc1 307 SUPERFAMILY SSF103481 182 290 2.22E-5 T 14-10-2018 VAB027_1162 5c64e237a496e51bf7d5e97c554bfbc1 307 Pfam PF00892 EamA-like transporter family 7 136 7.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1162 5c64e237a496e51bf7d5e97c554bfbc1 307 SUPERFAMILY SSF103481 41 138 1.12E-13 T 14-10-2018 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 19 36 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 SUPERFAMILY SSF51905 15 382 3.4E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 Gene3D G3DSA:3.50.50.60 15 376 2.9E-137 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 Gene3D G3DSA:3.30.9.10 92 330 2.9E-137 T 14-10-2018 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 Gene3D G3DSA:1.10.8.870 398 470 5.0E-23 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 37 5.2E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 5.2E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 43 55 5.2E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 5.2E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 14 26 5.2E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 88 100 5.2E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 Pfam PF01266 FAD dependent oxidoreductase 15 333 7.2E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAB027_509 f27eae0773abf5d457a9528d8062fce3 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 503 2.0E-12 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Pfam PF13549 ATP-grasp domain 490 706 1.9E-68 T 14-10-2018 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 SMART SM00881 7 102 3.0E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 1.3E-50 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Pfam PF00583 Acetyltransferase (GNAT) family 772 875 1.1E-7 T 14-10-2018 IPR000182 GNAT domain VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 SUPERFAMILY SSF56059 492 706 4.57E-29 T 14-10-2018 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 SUPERFAMILY SSF51735 2 140 1.67E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Pfam PF13380 CoA binding domain 11 136 3.6E-19 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 SUPERFAMILY SSF52210 297 457 6.8E-44 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Gene3D G3DSA:3.40.630.30 729 893 1.1E-37 T 14-10-2018 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Gene3D G3DSA:3.40.50.720 1 131 4.0E-32 T 14-10-2018 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Gene3D G3DSA:3.40.50.261 295 465 5.2E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Gene3D G3DSA:3.30.470.20 493 703 1.0E-55 T 14-10-2018 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Gene3D G3DSA:3.40.50.261 132 293 4.6E-51 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 SUPERFAMILY SSF52210 131 292 1.22E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 Gene3D G3DSA:3.30.1490.20 511 588 1.0E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_588 6043dbd90d4df81dd3fd41b2a03788ee 893 SUPERFAMILY SSF55729 738 878 3.66E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.4E-25 T 14-10-2018 IPR001498 Impact, N-terminal VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 SUPERFAMILY SSF54211 4 134 3.49E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 Gene3D G3DSA:3.30.230.30 2 136 2.2E-48 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 SUPERFAMILY SSF54980 138 201 3.38E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 7.2E-12 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VAB027_3711 d468d2ebcb28c643b930b546cc747c39 210 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 201 3.5E-66 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.4E-236 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 SUPERFAMILY SSF51569 1 291 1.45E-100 T 14-10-2018 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 SUPERFAMILY SSF110921 393 498 2.09E-20 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 Gene3D G3DSA:3.20.20.70 1 277 1.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.7E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 SMART SM00917 369 499 4.1E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.297 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 Gene3D G3DSA:1.10.238.260 280 393 3.6E-32 T 14-10-2018 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 Gene3D G3DSA:3.30.160.270 394 500 7.2E-7 T 14-10-2018 VAB027_3112 3378fa6f16aff509cde95bf16b63fd1b 516 Pfam PF00682 HMGL-like 4 273 2.1E-101 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VAB027_1426 1fc5ae7bac4be854325c4b747366a1eb 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VAB027_1426 1fc5ae7bac4be854325c4b747366a1eb 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 1.8E-35 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 Pfam PF00589 Phage integrase family 117 288 2.5E-54 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 56.059 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 6.5E-117 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 Gene3D G3DSA:1.10.150.130 8 102 4.4E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 SUPERFAMILY SSF56349 11 294 1.38E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 Gene3D G3DSA:1.10.443.10 114 296 2.4E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.687 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VAB027_3044 1ef13c1a788ef142c94d899db0ef4039 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 1.3E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 SUPERFAMILY SSF54211 169 253 1.02E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 126 1.8E-5 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Gene3D G3DSA:3.30.230.40 257 357 1.8E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 SUPERFAMILY SSF56784 3 158 2.1E-38 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 3.7E-79 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 7.4E-28 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Gene3D G3DSA:3.40.50.1000 1 164 1.2E-44 T 14-10-2018 IPR023214 HAD superfamily VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 SUPERFAMILY SSF54211 254 344 1.26E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.897 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Gene3D G3DSA:3.30.230.40 165 256 1.6E-35 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 50.879 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 3.4E-46 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VAB027_1816 70f6d2aa4e09db1fbfedc3cd2dbc478f 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 6.4E-66 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 SUPERFAMILY SSF117916 98 187 1.79E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 6.0E-95 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 SUPERFAMILY SSF89360 4 100 3.92E-22 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 Pfam PF01106 NifU-like domain 114 179 4.7E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.497 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 101 2.5E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 Gene3D G3DSA:3.30.300.130 104 192 3.1E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 2.0E-28 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VAB027_173 de273ddcae90c9c6fe657d0bc46e1f70 195 Gene3D G3DSA:2.60.300.12 4 101 5.2E-14 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 SUPERFAMILY SSF46589 1 114 5.75E-26 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.98 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 Gene3D G3DSA:3.30.930.10 107 434 9.5E-113 T 14-10-2018 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.3E-172 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 SUPERFAMILY SSF55681 118 431 1.94E-97 T 14-10-2018 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 Gene3D G3DSA:1.10.287.40 1 106 3.7E-20 T 14-10-2018 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 8.9E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 5.9E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1790 8d37a7a013cd5e748a62da476398058a 435 PIRSF PIRSF001529 1 435 3.7E-190 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 SUPERFAMILY SSF55008 160 232 8.25E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 ProSitePatterns PS01047 Heavy-metal-associated domain. 169 198 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Pfam PF00122 E1-E2 ATPase 386 566 3.9E-48 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 742 6.9E-28 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 601 6.9E-28 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 808 820 6.9E-28 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 6.9E-28 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 721 6.9E-28 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 785 804 6.9E-28 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 SUPERFAMILY SSF81665 351 581 1.96E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 299 895 5.1E-185 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Gene3D G3DSA:3.40.1110.10 598 717 3.0E-97 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Gene3D G3DSA:2.70.150.20 373 489 1.4E-36 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 353 893 1.6E-116 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Gene3D G3DSA:3.40.50.1000 568 837 3.0E-97 T 14-10-2018 IPR023214 HAD superfamily VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Gene3D G3DSA:3.30.70.100 62 132 1.5E-5 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Gene3D G3DSA:3.30.70.100 150 236 2.0E-21 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Pfam PF00403 Heavy-metal-associated domain 168 224 2.7E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 ProSitePatterns PS01229 Hypothetical cof family signature 2. 785 807 - T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 SUPERFAMILY SSF55008 65 130 3.4E-7 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 583 799 9.3E-46 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 355 374 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 303 322 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 762 779 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 819 833 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 508 522 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 206 226 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 PRINTS PR00943 Copper-transporting ATPase signature 570 585 2.3E-11 T 14-10-2018 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 SUPERFAMILY SSF56784 585 891 1.6E-59 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 SUPERFAMILY SSF81653 388 485 1.44E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 318 894 2.4E-184 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 589 595 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VAB027_2857 7dd0d0c8ab92c28bf02a149246fadea9 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 357 863 6.2E-93 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.0E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF06826 Predicted Permease Membrane Region 387 554 3.7E-43 T 14-10-2018 IPR006512 YidE/YbjL duplication VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Gene3D G3DSA:3.30.70.1450 292 370 1.3E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF02080 TrkA-C domain 228 279 1.9E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF02080 TrkA-C domain 307 372 7.4E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 558 59.491 T 14-10-2018 IPR023017 Transport protein YbjL, putative VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 SUPERFAMILY SSF116726 292 375 1.83E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 4.1E-30 T 14-10-2018 IPR006512 YidE/YbjL duplication VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 542 8.6E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 SUPERFAMILY SSF116726 228 283 5.23E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_1826 9aaaebc383d6cb4cab66885dbbe22b9b 558 Gene3D G3DSA:3.30.70.1450 224 286 3.9E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_1158 ef0e4c30083bbe2ea95a996d2e0db662 282 Gene3D G3DSA:2.60.120.10 18 275 8.0E-88 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1158 ef0e4c30083bbe2ea95a996d2e0db662 282 PIRSF PIRSF006232 3 282 8.3E-93 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VAB027_1158 ef0e4c30083bbe2ea95a996d2e0db662 282 Gene3D G3DSA:2.60.120.10 143 249 8.0E-88 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1158 ef0e4c30083bbe2ea95a996d2e0db662 282 SUPERFAMILY SSF51182 7 280 2.89E-78 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_1158 ef0e4c30083bbe2ea95a996d2e0db662 282 Pfam PF05726 Pirin C-terminal cupin domain 180 279 2.8E-33 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VAB027_1158 ef0e4c30083bbe2ea95a996d2e0db662 282 Pfam PF02678 Pirin 31 121 4.3E-34 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 Pfam PF00303 Thymidylate synthase 3 283 2.1E-73 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 Gene3D G3DSA:3.30.572.10 1 283 3.7E-80 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.4E-42 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 SUPERFAMILY SSF55831 3 283 8.64E-92 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3172 f4f88eca57f041e2ce34b74aff677016 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.586 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAB027_3480 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 Pfam PF04102 SlyX 9 75 1.6E-24 T 14-10-2018 IPR007236 SlyX VAB027_3480 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 Gene3D G3DSA:1.20.5.300 2 52 1.1E-5 T 14-10-2018 VAB027_3480 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.452 T 14-10-2018 IPR007236 SlyX VAB027_2624 25f9dd87bdf66cd263fdd58ebd8eedde 237 SUPERFAMILY SSF53067 111 223 1.55E-23 T 14-10-2018 VAB027_2624 25f9dd87bdf66cd263fdd58ebd8eedde 237 SUPERFAMILY SSF53067 4 107 1.99E-31 T 14-10-2018 VAB027_2624 25f9dd87bdf66cd263fdd58ebd8eedde 237 Pfam PF00814 Glycoprotease family 30 190 1.1E-32 T 14-10-2018 IPR000905 Gcp-like domain VAB027_2624 25f9dd87bdf66cd263fdd58ebd8eedde 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 225 3.0E-68 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VAB027_2624 25f9dd87bdf66cd263fdd58ebd8eedde 237 Gene3D G3DSA:3.30.420.40 5 228 6.7E-79 T 14-10-2018 VAB027_2624 25f9dd87bdf66cd263fdd58ebd8eedde 237 Gene3D G3DSA:3.30.420.40 96 194 6.7E-79 T 14-10-2018 VAB027_3308 0c121c3de9719d960afd68a11057d996 376 Pfam PF12857 TOBE-like domain 288 345 1.8E-14 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 VAB027_3308 0c121c3de9719d960afd68a11057d996 376 SMART SM00382 27 214 1.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3308 0c121c3de9719d960afd68a11057d996 376 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3308 0c121c3de9719d960afd68a11057d996 376 SUPERFAMILY SSF52540 3 246 1.08E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3308 0c121c3de9719d960afd68a11057d996 376 Pfam PF00005 ABC transporter 19 164 4.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3308 0c121c3de9719d960afd68a11057d996 376 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.4E-115 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 VAB027_3308 0c121c3de9719d960afd68a11057d996 376 Gene3D G3DSA:3.40.50.300 2 290 4.2E-79 T 14-10-2018 VAB027_3308 0c121c3de9719d960afd68a11057d996 376 SUPERFAMILY SSF50331 240 345 4.02E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_1020 0cc113fccd1f47ef643ad1e8cbac6c09 323 Gene3D G3DSA:1.10.10.2830 153 271 3.9E-16 T 14-10-2018 VAB027_1020 0cc113fccd1f47ef643ad1e8cbac6c09 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 232 1.9E-23 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VAB027_1020 0cc113fccd1f47ef643ad1e8cbac6c09 323 SUPERFAMILY SSF110849 74 150 7.85E-9 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VAB027_1020 0cc113fccd1f47ef643ad1e8cbac6c09 323 SMART SM00470 53 149 7.5E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VAB027_1020 0cc113fccd1f47ef643ad1e8cbac6c09 323 Pfam PF02195 ParB-like nuclease domain 73 145 6.2E-9 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 SUPERFAMILY SSF160246 5 146 4.45E-38 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 Gene3D G3DSA:3.40.50.300 290 566 4.3E-100 T 14-10-2018 VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 7.5E-22 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 SUPERFAMILY SSF52540 175 559 2.29E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 Gene3D G3DSA:3.30.450.90 148 287 1.8E-43 T 14-10-2018 VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 Pfam PF00437 Type II/IV secretion system protein 192 454 6.6E-78 T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_3426 609abd8dd5b4524e773a94964d065ee6 575 SMART SM00382 315 436 0.0014 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 2.7E-23 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 SMART SM00662 23 235 1.4E-102 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 SUPERFAMILY SSF47789 252 326 5.23E-25 T 14-10-2018 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 2.7E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Gene3D G3DSA:2.170.120.12 53 178 9.3E-82 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 4.7E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.237 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 1.0E-35 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Gene3D G3DSA:1.10.150.20 245 330 8.0E-38 T 14-10-2018 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 SUPERFAMILY SSF55257 6 232 7.26E-29 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 SUPERFAMILY SSF56553 53 179 5.06E-41 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 Gene3D G3DSA:3.30.1360.10 17 229 9.3E-82 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_1298 3d021b41473109a4077d8b0611a60ed4 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.6E-109 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_2682 c0fd96101373153a6b0c56b916aab007 110 Pfam PF00462 Glutaredoxin 16 80 2.7E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAB027_2682 c0fd96101373153a6b0c56b916aab007 110 PIRSF PIRSF005894 1 107 1.4E-51 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VAB027_2682 c0fd96101373153a6b0c56b916aab007 110 Gene3D G3DSA:3.40.30.10 2 106 3.6E-30 T 14-10-2018 VAB027_2682 c0fd96101373153a6b0c56b916aab007 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.1E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related VAB027_2682 c0fd96101373153a6b0c56b916aab007 110 SUPERFAMILY SSF52833 1 104 3.57E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.30.470.20 665 934 1.5E-126 T 14-10-2018 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.30.470.20 119 403 2.7E-129 T 14-10-2018 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.40.50.20 554 662 1.4E-49 T 14-10-2018 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF56059 128 401 5.66E-109 T 14-10-2018 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.40.50.20 1 116 3.0E-50 T 14-10-2018 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF52335 937 1071 3.14E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SMART SM01096 424 547 5.0E-78 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.40.50.1380 937 1072 5.9E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF52440 1 127 7.77E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:1.10.1030.10 404 553 1.6E-53 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.9E-42 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF52440 556 675 1.73E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.14 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF56059 673 932 2.12E-105 T 14-10-2018 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SMART SM00851 955 1041 4.7E-28 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 6.9E-39 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF48108 396 554 4.32E-53 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.402 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAB027_3017 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02142 MGS-like domain 956 1041 3.4E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VAB027_2237 6ea2853088b2cc31525d1f06ac2a1d4e 284 Gene3D G3DSA:3.20.20.450 4 246 1.1E-65 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2237 6ea2853088b2cc31525d1f06ac2a1d4e 284 Pfam PF00563 EAL domain 9 240 1.3E-55 T 14-10-2018 IPR001633 EAL domain VAB027_2237 6ea2853088b2cc31525d1f06ac2a1d4e 284 SUPERFAMILY SSF141868 9 247 3.79E-63 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2237 6ea2853088b2cc31525d1f06ac2a1d4e 284 SMART SM00052 3 245 8.1E-29 T 14-10-2018 IPR001633 EAL domain VAB027_490 10642420bd0f40c48eea3688b25dd191 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 4.1E-50 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VAB027_490 10642420bd0f40c48eea3688b25dd191 151 SUPERFAMILY SSF48695 34 148 1.82E-41 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VAB027_490 10642420bd0f40c48eea3688b25dd191 151 PIRSF PIRSF006105 1 151 1.1E-47 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VAB027_490 10642420bd0f40c48eea3688b25dd191 151 Gene3D G3DSA:1.10.1130.10 65 132 3.0E-29 T 14-10-2018 VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 SMART SM00862 151 227 2.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 Pfam PF00072 Response regulator receiver domain 7 116 4.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 3.0E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 SMART SM00448 5 115 4.8E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 SUPERFAMILY SSF52172 4 187 3.84E-38 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 Gene3D G3DSA:1.10.10.10 131 230 6.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_628 845f9ebb9bed6d9f1c70fef4f0b11a8a 230 Gene3D G3DSA:3.40.50.2300 1 130 1.7E-34 T 14-10-2018 VAB027_3165 e56a7759528d7a77555939170e78451e 949 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 940 21.438 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VAB027_3165 e56a7759528d7a77555939170e78451e 949 SUPERFAMILY SSF50677 205 408 4.5E-53 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_3165 e56a7759528d7a77555939170e78451e 949 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 9.2E-216 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3165 e56a7759528d7a77555939170e78451e 949 SUPERFAMILY SSF52374 4 653 2.29E-136 T 14-10-2018 VAB027_3165 e56a7759528d7a77555939170e78451e 949 Gene3D G3DSA:3.40.50.620 25 635 1.5E-239 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3165 e56a7759528d7a77555939170e78451e 949 Gene3D G3DSA:1.10.730.20 646 941 5.0E-84 T 14-10-2018 VAB027_3165 e56a7759528d7a77555939170e78451e 949 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3165 e56a7759528d7a77555939170e78451e 949 Pfam PF08264 Anticodon-binding domain of tRNA 691 853 2.3E-25 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VAB027_3165 e56a7759528d7a77555939170e78451e 949 Pfam PF06827 Zinc finger found in FPG and IleRS 910 937 1.2E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VAB027_3165 e56a7759528d7a77555939170e78451e 949 SUPERFAMILY SSF47323 658 940 5.05E-73 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3165 e56a7759528d7a77555939170e78451e 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAB027_3165 e56a7759528d7a77555939170e78451e 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 4.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAB027_3165 e56a7759528d7a77555939170e78451e 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAB027_3165 e56a7759528d7a77555939170e78451e 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 4.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAB027_3165 e56a7759528d7a77555939170e78451e 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 4.8E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAB027_3165 e56a7759528d7a77555939170e78451e 949 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 853 2.1E-291 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAB027_3165 e56a7759528d7a77555939170e78451e 949 Gene3D G3DSA:3.90.740.10 195 413 1.5E-239 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 SUPERFAMILY SSF51735 2 185 4.61E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.5E-56 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 Gene3D G3DSA:3.30.360.10 158 322 2.2E-127 T 14-10-2018 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 107 3.2E-30 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 SUPERFAMILY SSF55347 159 321 9.23E-59 T 14-10-2018 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 SMART SM00846 2 159 9.3E-70 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 Gene3D G3DSA:3.40.50.720 3 332 2.2E-127 T 14-10-2018 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 5.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 5.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 5.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 5.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 5.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.226 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 PIRSF PIRSF000149 1 341 2.2E-125 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3347 21fb0ab7cdab08496af75c80a443a822 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 3.0E-197 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VAB027_1678 53cc48c97b5f0bd36f6541ff8120da25 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 6.1E-35 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAB027_1678 53cc48c97b5f0bd36f6541ff8120da25 528 Gene3D G3DSA:3.40.50.720 379 528 4.2E-33 T 14-10-2018 VAB027_1678 53cc48c97b5f0bd36f6541ff8120da25 528 SUPERFAMILY SSF51735 387 518 3.19E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1678 53cc48c97b5f0bd36f6541ff8120da25 528 Gene3D G3DSA:1.20.1530.20 2 363 6.5E-45 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VAB027_1678 53cc48c97b5f0bd36f6541ff8120da25 528 Pfam PF02254 TrkA-N domain 388 504 6.6E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 Gene3D G3DSA:1.20.120.1380 263 466 4.0E-57 T 14-10-2018 VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 SMART SM00382 281 419 6.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 Pfam PF00448 SRP54-type protein, GTPase domain 284 472 1.8E-38 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 SUPERFAMILY SSF52540 279 470 8.24E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 Gene3D G3DSA:3.40.50.300 277 463 4.0E-57 T 14-10-2018 VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 370 4.6E-87 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VAB027_2706 34295d242ec88c2f4dbb2b66e66b6847 495 SMART SM00962 282 475 3.0E-64 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 Gene3D G3DSA:3.10.20.30 1 104 2.4E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 SUPERFAMILY SSF46548 105 232 6.45E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 Gene3D G3DSA:1.10.1060.10 105 236 2.4E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 2.7E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 1.6E-29 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 14-10-2018 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 SUPERFAMILY SSF54292 1 104 4.52E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_2724 7e4952d1a92a38c1079d9c36b15ecb1d 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_2934 5001b2cf2e028af0b0e14cf8a0a31c80 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 2.6E-114 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VAB027_2934 5001b2cf2e028af0b0e14cf8a0a31c80 446 Pfam PF11973 NQRA C-terminal domain 261 310 4.9E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VAB027_2934 5001b2cf2e028af0b0e14cf8a0a31c80 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 1.9E-214 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VAB027_2934 5001b2cf2e028af0b0e14cf8a0a31c80 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.408 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 SUPERFAMILY SSF63411 701 912 8.03E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Pfam PF00675 Insulinase (Peptidase family M16) 22 158 1.3E-36 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 SUPERFAMILY SSF63411 234 457 6.5E-75 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 SUPERFAMILY SSF63411 4 226 2.38E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Gene3D G3DSA:3.30.830.10 468 850 1.4E-110 T 14-10-2018 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Gene3D G3DSA:3.30.830.10 1 226 2.1E-85 T 14-10-2018 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Gene3D G3DSA:3.30.830.10 239 466 2.3E-71 T 14-10-2018 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Pfam PF16187 Middle or third domain of peptidase_M16 365 642 2.9E-84 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Gene3D G3DSA:3.30.830.10 616 875 1.4E-110 T 14-10-2018 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Pfam PF05193 Peptidase M16 inactive domain 182 357 3.0E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 Pfam PF05193 Peptidase M16 inactive domain 646 822 1.6E-11 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 SUPERFAMILY SSF63411 468 691 3.17E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2710 1684cf670928af57fcf222f3bd8f8b07 923 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 2.6E-175 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 SMART SM00382 220 426 0.0082 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 SUPERFAMILY SSF52540 201 452 2.56E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 Gene3D G3DSA:3.40.50.300 181 460 1.2E-106 T 14-10-2018 VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 Gene3D G3DSA:1.10.860.10 17 180 2.8E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 SUPERFAMILY SSF48024 22 133 4.71E-37 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.0E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VAB027_3462 a8fd7fb29e3730a295af0f8482642c6b 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 2.8E-113 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VAB027_312 e4a25bcf1c8e1177d24e303e58d7ff46 358 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 34 321 2.5E-48 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VAB027_312 e4a25bcf1c8e1177d24e303e58d7ff46 358 Gene3D G3DSA:3.60.60.10 31 351 1.3E-111 T 14-10-2018 VAB027_312 e4a25bcf1c8e1177d24e303e58d7ff46 358 SUPERFAMILY SSF56235 34 326 1.93E-90 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1000 55239062f75f87f9f2c795138c7bb240 151 Gene3D G3DSA:1.20.120.550 1 143 6.4E-25 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VAB027_1000 55239062f75f87f9f2c795138c7bb240 151 Pfam PF01124 MAPEG family 4 116 8.9E-24 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VAB027_1000 55239062f75f87f9f2c795138c7bb240 151 SUPERFAMILY SSF161084 2 123 3.92E-27 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VAB027_1817 560b0b95c09642dfa48484960678e94e 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 33.919 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VAB027_1817 560b0b95c09642dfa48484960678e94e 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 3.1E-68 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VAB027_1817 560b0b95c09642dfa48484960678e94e 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 1.8E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase VAB027_1817 560b0b95c09642dfa48484960678e94e 203 SUPERFAMILY SSF52317 5 202 6.59E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1817 560b0b95c09642dfa48484960678e94e 203 Gene3D G3DSA:3.40.50.880 1 203 2.3E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1817 560b0b95c09642dfa48484960678e94e 203 PIRSF PIRSF000495 3 203 1.3E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VAB027_63 a170109fa12b364988a65509f6cf65ef 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 8.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_63 a170109fa12b364988a65509f6cf65ef 153 SUPERFAMILY SSF54909 68 152 1.18E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_63 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.2E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_63 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.2E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_63 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.2E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_63 a170109fa12b364988a65509f6cf65ef 153 SUPERFAMILY SSF46785 6 67 6.39E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_63 a170109fa12b364988a65509f6cf65ef 153 Gene3D G3DSA:3.30.70.920 59 141 2.5E-32 T 14-10-2018 VAB027_63 a170109fa12b364988a65509f6cf65ef 153 Gene3D G3DSA:1.10.10.10 3 58 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_63 a170109fa12b364988a65509f6cf65ef 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 1.5E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAB027_63 a170109fa12b364988a65509f6cf65ef 153 SMART SM00344 7 114 4.6E-41 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 SUPERFAMILY SSF52540 8 642 2.66E-181 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 Gene3D G3DSA:3.40.50.300 11 273 4.2E-100 T 14-10-2018 VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 Gene3D G3DSA:3.40.50.300 281 636 1.2E-132 T 14-10-2018 VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 Gene3D G3DSA:1.10.486.10 382 538 1.2E-132 T 14-10-2018 VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 271 6.6E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 Gene3D G3DSA:1.10.10.160 115 187 4.2E-100 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 6.7E-79 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAB027_3679 eae3e70d8f7f24608672b2af00bb1205 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 721 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VAB027_882 8afa74ffc96db4090e526f3291cc326c 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.2E-18 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 VAB027_882 8afa74ffc96db4090e526f3291cc326c 92 PIRSF PIRSF028784 1 92 6.0E-33 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 Pfam PF11849 Domain of unknown function (DUF3369) 148 314 5.3E-40 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 Pfam PF13487 HD domain 389 452 1.4E-19 T 14-10-2018 VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 SMART SM00471 334 471 4.6E-5 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 Gene3D G3DSA:3.40.50.2300 15 161 2.3E-14 T 14-10-2018 VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 SUPERFAMILY SSF52172 25 156 6.83E-11 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 Gene3D G3DSA:1.10.3210.10 314 513 2.4E-69 T 14-10-2018 VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 SUPERFAMILY SSF109604 324 502 4.85E-37 T 14-10-2018 VAB027_835 dcbb4b9e8857cb3aa75f424f3a4165d9 513 Pfam PF00072 Response regulator receiver domain 28 137 1.9E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2832 c184a877232dd7ce2a92bf828c975006 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.7E-109 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VAB027_2832 c184a877232dd7ce2a92bf828c975006 397 Gene3D G3DSA:1.20.1330.10 42 214 1.0E-32 T 14-10-2018 VAB027_2832 c184a877232dd7ce2a92bf828c975006 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.5E-8 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2832 c184a877232dd7ce2a92bf828c975006 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 397 4.8E-5 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2832 c184a877232dd7ce2a92bf828c975006 397 SUPERFAMILY SSF64518 1 397 5.49E-63 T 14-10-2018 VAB027_2832 c184a877232dd7ce2a92bf828c975006 397 Gene3D G3DSA:1.20.1330.10 263 373 2.9E-9 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 5.8E-36 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:2.40.50.140 318 390 2.1E-34 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:3.40.50.10190 583 669 6.2E-24 T 14-10-2018 IPR036420 BRCT domain superfamily VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 666 3.3E-10 T 14-10-2018 IPR001357 BRCT domain VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:1.10.150.20 506 582 5.7E-28 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SUPERFAMILY SSF56091 3 316 4.8E-123 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SUPERFAMILY SSF47781 403 583 3.48E-60 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Pfam PF14520 Helix-hairpin-helix domain 446 501 4.8E-6 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SUPERFAMILY SSF50249 318 399 2.91E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SMART SM00278 512 531 350.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SMART SM00278 446 465 19.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SMART SM00278 544 563 1800.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SMART SM00278 480 499 16.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:1.10.287.610 1 68 5.9E-27 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SMART SM00292 594 669 3.8E-8 T 14-10-2018 IPR001357 BRCT domain VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.2E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:1.10.150.20 432 505 3.9E-30 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SUPERFAMILY SSF52113 595 668 4.8E-16 T 14-10-2018 IPR036420 BRCT domain superfamily VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Hamap MF_01588 DNA ligase [ligA]. 2 668 53.421 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 663 1.5E-262 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:3.30.470.90 69 317 4.7E-102 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Pfam PF12826 Helix-hairpin-helix motif 510 573 9.3E-21 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Gene3D G3DSA:2.20.70.80 391 431 7.9E-21 T 14-10-2018 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 2.7E-132 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 SMART SM00532 3 448 2.5E-277 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VAB027_1659 80d214861d0e5742708eab1dd10c7ba3 669 PIRSF PIRSF001604 1 669 2.6E-250 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 PIRSF PIRSF006092 1 158 1.9E-44 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 9.4E-25 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 51.505 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 Gene3D G3DSA:3.10.50.30 77 159 8.1E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 9.9E-73 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 Gene3D G3DSA:1.10.287.180 1 76 3.5E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.848 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.8E-22 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 SUPERFAMILY SSF46557 3 78 3.92E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAB027_178 fd8694c3b1292f096730a91adf99fa7f 160 SUPERFAMILY SSF54534 80 156 5.1E-19 T 14-10-2018 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 Gene3D G3DSA:1.20.1220.12 424 545 2.0E-48 T 14-10-2018 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 SUPERFAMILY SSF51645 14 544 4.05E-187 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 9.7E-276 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 Pfam PF01274 Malate synthase 24 544 1.2E-198 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 PIRSF PIRSF001363 13 545 2.0E-252 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAB027_1393 43de151f50d103438bba18fa23e1ff1b 545 Gene3D G3DSA:3.20.20.360 13 423 1.0E-188 T 14-10-2018 VAB027_1105 f027df334ee427efc101b187d378df7d 385 SMART SM00671 207 242 1.7E-4 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 SMART SM00671 135 170 11.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 SMART SM00671 171 206 93.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 SMART SM00671 67 97 330.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 Pfam PF08238 Sel1 repeat 196 206 2.2 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 Pfam PF08238 Sel1 repeat 137 169 0.085 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 Pfam PF08238 Sel1 repeat 82 97 0.3 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 Pfam PF08238 Sel1 repeat 207 242 6.5E-5 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1105 f027df334ee427efc101b187d378df7d 385 Gene3D G3DSA:1.25.40.10 192 319 9.2E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1105 f027df334ee427efc101b187d378df7d 385 Gene3D G3DSA:1.25.40.10 28 178 3.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1105 f027df334ee427efc101b187d378df7d 385 SUPERFAMILY SSF81901 79 281 1.31E-25 T 14-10-2018 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 SMART SM00382 386 577 8.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 SUPERFAMILY SSF90123 25 342 5.36E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 Gene3D G3DSA:1.20.1560.10 10 334 4.2E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 Gene3D G3DSA:3.40.50.300 351 604 1.3E-91 T 14-10-2018 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 Pfam PF00005 ABC transporter 378 531 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 Pfam PF00664 ABC transporter transmembrane region 40 309 9.8E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1131 7ca16958284d1adc6cb8612d8f45aab5 619 SUPERFAMILY SSF52540 350 601 3.28E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF52935 323 469 1.18E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.8E-188 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 7.9E-155 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:2.40.33.10 71 167 1.9E-147 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.40.1380.20 336 467 1.1E-42 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 9.4E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.6E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.20.20.60 4 332 1.9E-147 T 14-10-2018 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF51621 1 338 3.14E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_3338 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF50800 70 167 6.28E-30 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAB027_717 a1d6cb6d3b2108c189e1dc2f82cdffc0 162 SUPERFAMILY SSF55729 3 157 3.55E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_717 a1d6cb6d3b2108c189e1dc2f82cdffc0 162 Pfam PF00583 Acetyltransferase (GNAT) family 27 138 8.8E-14 T 14-10-2018 IPR000182 GNAT domain VAB027_717 a1d6cb6d3b2108c189e1dc2f82cdffc0 162 Gene3D G3DSA:3.40.630.30 2 162 3.0E-43 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 SUPERFAMILY SSF82693 150 337 5.75E-18 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 SUPERFAMILY SSF82714 726 801 5.62E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:3.30.70.1430 54 818 1.8E-256 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:3.30.70.1430 570 668 1.8E-256 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:3.30.2090.10 720 810 1.8E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 SUPERFAMILY SSF82693 54 149 1.92E-22 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:3.30.70.1440 669 870 1.8E-256 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:1.20.1640.10 523 1022 1.8E-256 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 SUPERFAMILY SSF82866 306 505 5.75E-34 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 SUPERFAMILY SSF82714 198 281 6.67E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:3.30.2090.10 193 285 1.8E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Pfam PF00873 AcrB/AcrD/AcrF family 18 1026 7.0E-169 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:1.20.1640.10 24 522 1.8E-256 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 SUPERFAMILY SSF82866 807 1028 1.14E-45 T 14-10-2018 VAB027_2320 07a5984a5f645f9be46d291e3810e30b 1032 Gene3D G3DSA:3.30.70.1320 150 342 1.8E-256 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82714 704 787 1.16E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82693 40 134 1.1E-25 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82693 554 657 1.49E-16 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 7.4E-281 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82693 139 324 5.75E-19 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82866 792 1009 1.57E-48 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82714 183 266 2.35E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-70 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 SUPERFAMILY SSF82866 290 490 2.88E-46 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 VAB027_1552 c636336eca458e63c53a33f4ee000eb4 1036 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 VAB027_2556 91bffca655a614fddc7943889b927d48 389 Gene3D G3DSA:1.25.40.10 178 351 1.3E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 SUPERFAMILY SSF81901 39 273 1.8E-20 T 14-10-2018 VAB027_2556 91bffca655a614fddc7943889b927d48 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.451 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VAB027_2556 91bffca655a614fddc7943889b927d48 389 Gene3D G3DSA:1.25.40.10 20 102 5.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 Gene3D G3DSA:1.25.40.10 103 177 2.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 SMART SM00028 180 213 0.43 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 SMART SM00028 141 174 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 SMART SM00028 69 102 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 SMART SM00028 249 282 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2556 91bffca655a614fddc7943889b927d48 389 SMART SM00028 214 247 0.25 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 SUPERFAMILY SSF56176 340 421 4.36E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 SMART SM01091 342 420 7.3E-23 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 Gene3D G3DSA:3.10.580.10 201 330 2.7E-39 T 14-10-2018 VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF03471 Transporter associated domain 344 419 9.1E-17 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF00571 CBS domain 278 326 6.4E-4 T 14-10-2018 IPR000644 CBS domain VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 SUPERFAMILY SSF54631 192 329 1.06E-23 T 14-10-2018 VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 Gene3D G3DSA:3.30.465.10 340 418 7.8E-27 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VAB027_3285 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF01595 Domain of unknown function DUF21 13 181 1.4E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain VAB027_1669 dcb8da4ed21074d23c679bf0e95bd7cd 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 2.4E-26 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VAB027_1669 dcb8da4ed21074d23c679bf0e95bd7cd 97 SUPERFAMILY SSF52833 4 87 5.37E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1669 dcb8da4ed21074d23c679bf0e95bd7cd 97 Pfam PF10262 Rdx family 6 78 1.4E-31 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VAB027_1669 dcb8da4ed21074d23c679bf0e95bd7cd 97 Gene3D G3DSA:3.40.30.10 1 97 2.2E-40 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Pfam PF01807 CHC2 zinc finger 6 101 2.6E-42 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 PIRSF PIRSF002811 2 586 7.5E-144 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.107 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Gene3D G3DSA:3.40.1360.10 248 374 2.7E-40 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 SUPERFAMILY SSF117023 453 583 2.48E-43 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Pfam PF10410 DnaB-helicase binding domain of primase 376 431 8.3E-9 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Pfam PF13155 Toprim-like 270 356 4.4E-13 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 1.9E-146 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 SMART SM00766 456 581 5.6E-51 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Gene3D G3DSA:3.90.580.10 1 102 8.4E-42 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Gene3D G3DSA:1.20.50.20 375 433 1.1E-10 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 SUPERFAMILY SSF57783 4 101 2.04E-38 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 7.4E-34 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 1.6E-42 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 SMART SM00400 36 90 3.5E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Gene3D G3DSA:1.10.860.10 444 587 1.1E-62 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 SUPERFAMILY SSF56731 122 432 1.83E-110 T 14-10-2018 VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 SMART SM00493 266 337 4.6E-19 T 14-10-2018 IPR006171 TOPRIM domain VAB027_3331 e2ab5c32f1efca1a74bfd5a3aeadfb21 587 Gene3D G3DSA:3.90.980.10 122 247 1.3E-45 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 PIRSF PIRSF004486 1 316 9.9E-101 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 Gene3D G3DSA:3.40.50.150 10 315 3.8E-102 T 14-10-2018 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.273 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 Gene3D G3DSA:1.10.150.170 112 218 3.8E-102 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.0E-119 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 SUPERFAMILY SSF81799 113 216 7.19E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 Pfam PF01795 MraW methylase family 5 315 2.5E-110 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAB027_3036 3e7801d2013bd577cdde2c02387f827d 316 SUPERFAMILY SSF53335 7 316 1.46E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2073 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 SUPERFAMILY SSF52172 1 120 2.13E-35 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2073 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2073 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 SMART SM00448 2 115 1.5E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2073 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 Gene3D G3DSA:3.40.50.12740 2 121 4.5E-36 T 14-10-2018 VAB027_2392 c27832d29dcf2ca8dc928b8162dfa49a 411 Pfam PF13356 Arm DNA-binding domain 5 91 9.9E-21 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VAB027_2392 c27832d29dcf2ca8dc928b8162dfa49a 411 Gene3D G3DSA:1.10.150.130 93 210 4.3E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_2392 c27832d29dcf2ca8dc928b8162dfa49a 411 Gene3D G3DSA:1.10.443.10 211 391 1.0E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_2392 c27832d29dcf2ca8dc928b8162dfa49a 411 SUPERFAMILY SSF56349 103 383 4.41E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_2392 c27832d29dcf2ca8dc928b8162dfa49a 411 Pfam PF00589 Phage integrase family 210 373 9.7E-25 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_2392 c27832d29dcf2ca8dc928b8162dfa49a 411 Gene3D G3DSA:3.30.160.390 3 92 2.6E-28 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAB027_236 9ad27f40990f51c271f0e5ee65197931 127 Gene3D G3DSA:1.20.1300.10 1 127 1.2E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_236 9ad27f40990f51c271f0e5ee65197931 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.256 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAB027_236 9ad27f40990f51c271f0e5ee65197931 127 Pfam PF02300 Fumarate reductase subunit C 2 127 4.2E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAB027_236 9ad27f40990f51c271f0e5ee65197931 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAB027_236 9ad27f40990f51c271f0e5ee65197931 127 PIRSF PIRSF000180 1 127 2.7E-55 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAB027_236 9ad27f40990f51c271f0e5ee65197931 127 SUPERFAMILY SSF81343 1 127 2.4E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_911 d7a514bdc20895970e26c9b641e4df3d 218 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 34 218 5.5E-73 T 14-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 VAB027_911 d7a514bdc20895970e26c9b641e4df3d 218 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 37 218 1.3E-56 T 14-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 VAB027_2661 f071938980620bc523d5752c1da3ea6f 341 SUPERFAMILY SSF53659 4 336 7.4E-102 T 14-10-2018 VAB027_2661 f071938980620bc523d5752c1da3ea6f 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.4E-101 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VAB027_2661 f071938980620bc523d5752c1da3ea6f 341 PIRSF PIRSF002465 2 339 6.2E-126 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VAB027_2661 f071938980620bc523d5752c1da3ea6f 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.7E-106 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VAB027_2661 f071938980620bc523d5752c1da3ea6f 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.177 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VAB027_2661 f071938980620bc523d5752c1da3ea6f 341 Gene3D G3DSA:3.40.718.10 2 340 4.5E-119 T 14-10-2018 VAB027_1435 4d64b926173f1c11c51a032465789cfa 279 Gene3D G3DSA:3.40.50.300 20 272 3.1E-63 T 14-10-2018 VAB027_1435 4d64b926173f1c11c51a032465789cfa 279 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1435 4d64b926173f1c11c51a032465789cfa 279 Pfam PF00005 ABC transporter 37 184 5.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1435 4d64b926173f1c11c51a032465789cfa 279 SMART SM00382 45 233 9.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1435 4d64b926173f1c11c51a032465789cfa 279 SUPERFAMILY SSF52540 17 246 6.37E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1786 f17e7e08c2d6b58cf592ffcd3b5a7f57 489 Gene3D G3DSA:3.30.70.270 324 489 3.9E-43 T 14-10-2018 VAB027_1786 f17e7e08c2d6b58cf592ffcd3b5a7f57 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 487 1.6E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_1786 f17e7e08c2d6b58cf592ffcd3b5a7f57 489 SMART SM00267 324 489 5.2E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_1786 f17e7e08c2d6b58cf592ffcd3b5a7f57 489 SUPERFAMILY SSF55073 340 488 1.33E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1786 f17e7e08c2d6b58cf592ffcd3b5a7f57 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 486 2.8E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:3.30.65.10 751 813 5.6E-32 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:3.30.65.10 701 750 1.2E-7 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SMART SM00437 280 534 5.2E-123 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 738 55.629 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:1.10.290.10 288 412 2.6E-163 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:3.40.50.140 1 171 3.1E-67 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SUPERFAMILY SSF57783 750 813 2.55E-19 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SUPERFAMILY SSF56712 3 616 4.32E-201 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:2.20.25.10 814 871 1.3E-27 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SUPERFAMILY SSF57783 706 749 2.21E-7 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 114 127 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SMART SM00493 3 140 4.0E-30 T 14-10-2018 IPR006171 TOPRIM domain VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:1.10.460.10 173 578 2.6E-163 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 1.7E-251 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Gene3D G3DSA:2.70.20.10 221 480 2.6E-163 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 629 1.3E-4 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 751 6.1E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SUPERFAMILY SSF57783 815 871 5.61E-22 T 14-10-2018 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Pfam PF01751 Toprim domain 5 150 9.0E-32 T 14-10-2018 IPR006171 TOPRIM domain VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Pfam PF01131 DNA topoisomerase 165 572 1.6E-130 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 SMART SM00436 141 229 7.2E-49 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 870 3.5E-19 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VAB027_2373 9dc98f53279938b947422d5d407e2d6a 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 763 799 1.2E-10 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 SUPERFAMILY SSF88723 4 164 1.52E-39 T 14-10-2018 IPR029060 PIN-like domain superfamily VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 Gene3D G3DSA:1.10.150.20 167 255 7.1E-22 T 14-10-2018 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 162 1.0E-32 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 2.1E-22 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 SUPERFAMILY SSF47807 164 255 1.08E-19 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 Gene3D G3DSA:3.40.50.1010 1 166 1.3E-51 T 14-10-2018 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 SMART SM00475 3 254 4.4E-63 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.344 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VAB027_1534 ba3134d62d0c1ffe460faf162c1c847a 259 SMART SM00279 167 202 1.5E-7 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 SUPERFAMILY SSF51206 17 129 3.01E-15 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 437 4.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 Gene3D G3DSA:3.30.565.10 288 446 5.4E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 Gene3D G3DSA:2.60.120.10 7 139 7.6E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 Gene3D G3DSA:1.10.287.130 143 286 2.2E-9 T 14-10-2018 VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 SMART SM00387 327 438 7.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 SUPERFAMILY SSF55874 291 435 2.36E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1991 bbe12dcc31e2137acb8453f9b56923ba 449 Pfam PF00027 Cyclic nucleotide-binding domain 20 99 1.2E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Gene3D G3DSA:2.60.40.1080 135 222 2.7E-11 T 14-10-2018 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Gene3D G3DSA:2.60.40.1080 311 394 1.4E-16 T 14-10-2018 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Gene3D G3DSA:2.60.40.1080 395 486 1.0E-19 T 14-10-2018 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Gene3D G3DSA:2.60.40.1080 45 134 8.6E-14 T 14-10-2018 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Gene3D G3DSA:2.60.40.1080 223 310 9.7E-13 T 14-10-2018 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 SUPERFAMILY SSF49373 139 207 7.06E-5 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Pfam PF02368 Bacterial Ig-like domain (group 2) 398 477 2.0E-7 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 Pfam PF02368 Bacterial Ig-like domain (group 2) 50 122 7.2E-6 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 SMART SM00635 48 130 6.3E-4 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 SMART SM00635 309 389 1.6E-5 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 SMART SM00635 223 302 0.59 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 SMART SM00635 395 476 4.5E-11 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VAB027_2444 001491bd8768d17b69396de7073e4ec8 681 SUPERFAMILY SSF49373 397 477 5.3E-7 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VAB027_1348 0820d1501a6c7bb4e9123a4eb5513df5 109 Gene3D G3DSA:3.30.750.24 8 100 3.3E-12 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_1348 0820d1501a6c7bb4e9123a4eb5513df5 109 SUPERFAMILY SSF52091 1 97 2.94E-17 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_1348 0820d1501a6c7bb4e9123a4eb5513df5 109 Pfam PF13466 STAS domain 16 92 4.7E-15 T 14-10-2018 IPR002645 STAS domain VAB027_904 70d06961407daf41e86f8f22c158c98e 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.714 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 VAB027_904 70d06961407daf41e86f8f22c158c98e 139 Gene3D G3DSA:3.40.1650.10 8 136 7.2E-37 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VAB027_904 70d06961407daf41e86f8f22c158c98e 139 SUPERFAMILY SSF102546 1 139 2.75E-44 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VAB027_904 70d06961407daf41e86f8f22c158c98e 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.5E-48 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 SUPERFAMILY SSF54631 137 273 1.06E-13 T 14-10-2018 VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 SMART SM00924 34 137 6.1E-14 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 SUPERFAMILY SSF158791 33 129 3.79E-13 T 14-10-2018 VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 Pfam PF03448 MgtE intracellular N domain 36 135 5.4E-14 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 Gene3D G3DSA:1.10.357.20 274 447 3.4E-47 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 Gene3D G3DSA:3.10.580.10 133 258 4.8E-36 T 14-10-2018 VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 SUPERFAMILY SSF161093 276 446 3.66E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAB027_367 cbdc7ad04e40ab13a2e77a0734e1801a 448 Pfam PF01769 Divalent cation transporter 319 440 3.3E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAB027_2324 f9004f6f1b049b6d629cf233495a3a5a 77 Pfam PF06667 Phage shock protein B 3 74 4.5E-33 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VAB027_2324 f9004f6f1b049b6d629cf233495a3a5a 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 2.8E-37 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 SUPERFAMILY SSF52540 302 526 9.59E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 Pfam PF12848 ABC transporter 230 306 3.2E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 Gene3D G3DSA:3.40.50.300 286 555 1.5E-78 T 14-10-2018 VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 3.2E-293 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 SMART SM00382 31 236 2.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 SMART SM00382 348 522 6.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 Gene3D G3DSA:3.40.50.300 1 285 7.3E-86 T 14-10-2018 VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 Pfam PF00005 ABC transporter 22 191 6.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 Pfam PF00005 ABC transporter 340 473 2.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 SUPERFAMILY SSF52540 9 243 1.65E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3150 cecf967a3b2de6dd1f8805938000d604 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3275 2270126eb4ee66a0dae54a2a2e0d575f 145 PIRSF PIRSF006318 1 134 9.7E-53 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VAB027_3275 2270126eb4ee66a0dae54a2a2e0d575f 145 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 1.8E-45 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 9.9E-76 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 PIRSF PIRSF000441 75 266 3.5E-57 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 PIRSF PIRSF000441 7 81 270.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 Gene3D G3DSA:1.10.3130.10 1 142 1.9E-52 T 14-10-2018 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 1.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.6E-39 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 SMART SM00971 9 113 3.8E-63 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 Gene3D G3DSA:2.160.10.10 143 273 1.5E-38 T 14-10-2018 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_243 d4f85f9db4c86e20224b1180f05d33ee 273 SUPERFAMILY SSF51161 6 260 4.3E-65 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_1226 b55f8fb2fd78a116709970969886451f 312 Pfam PF03466 LysR substrate binding domain 94 301 2.4E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1226 b55f8fb2fd78a116709970969886451f 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 7.0E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 Gene3D G3DSA:3.40.190.10 169 270 1.7E-58 T 14-10-2018 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 Gene3D G3DSA:3.40.190.10 98 298 1.7E-58 T 14-10-2018 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 SUPERFAMILY SSF53850 95 303 6.7E-39 T 14-10-2018 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1226 b55f8fb2fd78a116709970969886451f 312 SUPERFAMILY SSF46785 11 90 4.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1226 b55f8fb2fd78a116709970969886451f 312 Gene3D G3DSA:1.10.10.10 9 95 4.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 SUPERFAMILY SSF54523 37 115 1.88E-23 T 14-10-2018 VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 4.4E-43 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 8.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 6.9E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 Gene3D G3DSA:3.30.1300.30 30 117 3.6E-36 T 14-10-2018 VAB027_165 a4ab622836ae522e1f99ffd3e2a64781 117 Pfam PF02501 Type II secretion system (T2SS), protein I 40 115 1.4E-22 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 Gene3D G3DSA:1.10.8.60 450 536 3.7E-11 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 3.2E-7 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 3.2E-7 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 3.2E-7 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 1.2E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 SUPERFAMILY SSF54211 565 756 8.72E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 Pfam PF13654 AAA domain 25 539 1.6E-184 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 Gene3D G3DSA:3.40.50.300 6 198 5.9E-28 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 Gene3D G3DSA:3.40.50.300 217 449 4.8E-56 T 14-10-2018 VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 Gene3D G3DSA:3.30.230.10 541 768 2.0E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_1152 6c615271e30da708eb37e3377e124e0b 786 SUPERFAMILY SSF52540 30 537 2.49E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2638 a4af34c26aba5e85c2a6773970694090 306 Gene3D G3DSA:3.40.50.11550 33 259 9.4E-27 T 14-10-2018 VAB027_2638 a4af34c26aba5e85c2a6773970694090 306 PIRSF PIRSF020419 1 290 3.0E-119 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VAB027_2638 a4af34c26aba5e85c2a6773970694090 306 SUPERFAMILY SSF159501 23 274 9.94E-75 T 14-10-2018 VAB027_2638 a4af34c26aba5e85c2a6773970694090 306 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 46 246 2.6E-58 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VAB027_2638 a4af34c26aba5e85c2a6773970694090 306 Gene3D G3DSA:1.10.8.760 146 210 9.4E-27 T 14-10-2018 VAB027_428 76e97d2e4eacdd798ba527ebfd86333c 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 1.1E-107 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_428 76e97d2e4eacdd798ba527ebfd86333c 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 63.871 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_428 76e97d2e4eacdd798ba527ebfd86333c 362 SUPERFAMILY SSF53901 7 325 3.81E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_428 76e97d2e4eacdd798ba527ebfd86333c 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 4.5E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_428 76e97d2e4eacdd798ba527ebfd86333c 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.1E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAB027_428 76e97d2e4eacdd798ba527ebfd86333c 362 Gene3D G3DSA:3.40.47.10 1 362 1.9E-162 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.1E-85 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 SUPERFAMILY SSF52374 145 336 3.56E-25 T 14-10-2018 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 202 8.2E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 SMART SM00764 147 333 6.4E-135 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 PIRSF PIRSF005751 1 350 1.3E-145 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 122 337 2.0E-125 T 14-10-2018 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 Pfam PF13673 Acetyltransferase (GNAT) domain 30 114 1.5E-6 T 14-10-2018 IPR000182 GNAT domain VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 SUPERFAMILY SSF55729 32 117 4.43E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 337 6.3E-137 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 VAB027_1448 3a53dde6ea3f31df36ee7c0b26d7bd32 351 Gene3D G3DSA:3.40.630.30 10 137 7.9E-11 T 14-10-2018 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 Hamap MF_00268 Protein RecA [recA]. 5 329 50.81 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 SMART SM00382 57 228 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3306 151a67955455c6e88c27927be88d74e2 354 Gene3D G3DSA:3.40.50.300 26 267 2.4E-83 T 14-10-2018 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.4E-143 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.0E-171 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 297 314 4.7E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 127 156 4.7E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 210 238 4.7E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 93 122 4.7E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 243 272 4.7E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 165 194 4.7E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAB027_3306 151a67955455c6e88c27927be88d74e2 354 SUPERFAMILY SSF52540 4 266 4.92E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3306 151a67955455c6e88c27927be88d74e2 354 Gene3D G3DSA:3.30.250.10 268 326 4.1E-27 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VAB027_3306 151a67955455c6e88c27927be88d74e2 354 SUPERFAMILY SSF54752 269 325 1.05E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VAB027_2853 1ac64bb65ec464b87c580b3d8da2204c 687 SUPERFAMILY SSF56935 45 687 9.77E-91 T 14-10-2018 VAB027_2853 1ac64bb65ec464b87c580b3d8da2204c 687 Gene3D G3DSA:2.40.170.20 56 687 5.6E-90 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_2853 1ac64bb65ec464b87c580b3d8da2204c 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 178 5.3E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_2853 1ac64bb65ec464b87c580b3d8da2204c 687 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 687 1.4E-112 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VAB027_2713 585383d72aea234700321552486c3008 76 Pfam PF09012 FeoC like transcriptional regulator 2 50 7.5E-11 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VAB027_2713 585383d72aea234700321552486c3008 76 SUPERFAMILY SSF46785 2 50 3.49E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 SUPERFAMILY SSF103190 122 186 1.23E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 SMART SM00283 373 634 3.1E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 Gene3D G3DSA:1.10.287.950 303 636 3.9E-68 T 14-10-2018 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 Pfam PF00672 HAMP domain 308 354 2.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 SUPERFAMILY SSF58104 326 635 8.5E-72 T 14-10-2018 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 Pfam PF02743 Cache domain 38 265 1.6E-20 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 600 9.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 SMART SM00304 304 358 3.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 Gene3D G3DSA:3.30.450.20 64 175 5.7E-26 T 14-10-2018 VAB027_784 936dd7e45b96d00dc50f64b645198fc3 636 Gene3D G3DSA:3.30.450.20 57 277 5.7E-26 T 14-10-2018 VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 Pfam PF00202 Aminotransferase class-III 33 395 6.1E-77 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 Gene3D G3DSA:3.90.1150.10 7 419 3.2E-179 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 4.2E-194 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 Gene3D G3DSA:3.40.640.10 69 317 3.2E-179 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 SUPERFAMILY SSF53383 1 423 1.99E-134 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_3223 f687c0bc45d41e6142d60438646a2afc 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.97 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VAB027_2313 8546561c2d256f3298044fdc36d99295 220 SUPERFAMILY SSF52540 5 201 6.14E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2313 8546561c2d256f3298044fdc36d99295 220 Pfam PF00005 ABC transporter 20 163 3.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2313 8546561c2d256f3298044fdc36d99295 220 Gene3D G3DSA:3.40.50.300 1 215 6.1E-51 T 14-10-2018 VAB027_2313 8546561c2d256f3298044fdc36d99295 220 SMART SM00382 28 212 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.9E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 Pfam PF13187 4Fe-4S dicluster domain 419 465 8.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 Gene3D G3DSA:3.30.70.20 175 253 8.8E-12 T 14-10-2018 VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 Gene3D G3DSA:3.30.70.20 413 484 6.1E-12 T 14-10-2018 VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 SUPERFAMILY SSF54862 143 523 2.28E-40 T 14-10-2018 VAB027_2162 ffef449bbdc2695fc5d788cb7e55bc19 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 Gene3D G3DSA:1.20.120.910 17 147 2.1E-35 T 14-10-2018 VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 1.1E-50 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 SUPERFAMILY SSF109635 7 106 5.1E-36 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 140 2.4E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 SUPERFAMILY SSF57716 108 146 4.42E-10 T 14-10-2018 VAB027_3250 d6038e852347d4934fccd25ae3755b57 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.808 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 SUPERFAMILY SSF52540 3 241 8.21E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Gene3D G3DSA:3.40.50.300 281 550 2.9E-69 T 14-10-2018 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF16326 ABC transporter C-terminal domain 564 632 1.0E-21 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Gene3D G3DSA:1.10.287.380 554 637 1.7E-28 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF00005 ABC transporter 336 469 2.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF12848 ABC transporter 224 298 1.9E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 Gene3D G3DSA:3.40.50.300 11 279 1.8E-65 T 14-10-2018 VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 SMART SM00382 28 230 6.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 SMART SM00382 344 514 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2132 c5488a7f16d9a3526d915009c2fe1ad6 639 SUPERFAMILY SSF52540 310 523 2.67E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 Gene3D G3DSA:3.90.870.10 1 205 2.9E-89 T 14-10-2018 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.377 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.8E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 Gene3D G3DSA:3.40.50.10990 206 368 7.4E-32 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 SUPERFAMILY SSF55821 3 202 5.26E-87 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.1E-75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 Pfam PF00925 GTP cyclohydrolase II 207 367 1.6E-41 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 PIRSF PIRSF001259 3 369 5.1E-132 T 14-10-2018 VAB027_2909 373aa5fef652d064d121a6e5698038f0 369 SUPERFAMILY SSF142695 205 367 1.83E-48 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_2271 e9673bc41466ce1c080448b339972c46 377 SUPERFAMILY SSF51419 14 242 4.11E-43 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_2271 e9673bc41466ce1c080448b339972c46 377 PIRSF PIRSF038941 1 372 1.2E-129 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VAB027_2271 e9673bc41466ce1c080448b339972c46 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 7.7E-173 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VAB027_2271 e9673bc41466ce1c080448b339972c46 377 Gene3D G3DSA:3.20.20.10 15 242 7.1E-145 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_2271 e9673bc41466ce1c080448b339972c46 377 Gene3D G3DSA:2.40.37.10 7 372 7.1E-145 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_2271 e9673bc41466ce1c080448b339972c46 377 SUPERFAMILY SSF50621 212 361 7.12E-24 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_3326 1f1469d23f5a981fe5497f15bc1cb815 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 3.0E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAB027_3326 1f1469d23f5a981fe5497f15bc1cb815 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.167 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAB027_3326 1f1469d23f5a981fe5497f15bc1cb815 208 SMART SM01207 10 185 9.1E-86 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAB027_3326 1f1469d23f5a981fe5497f15bc1cb815 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 8.7E-75 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAB027_1696 eccf0f907a9abfbe70b7d84c557c7041 230 PIRSF PIRSF006102 1 220 2.7E-77 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_1696 eccf0f907a9abfbe70b7d84c557c7041 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.15 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VAB027_1696 eccf0f907a9abfbe70b7d84c557c7041 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 7.2E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_1696 eccf0f907a9abfbe70b7d84c557c7041 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 3.7E-90 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 SMART SM00382 490 657 7.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 SMART SM00382 209 354 3.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Gene3D G3DSA:3.40.50.300 159 353 4.8E-63 T 14-10-2018 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 SUPERFAMILY SSF81923 1 142 3.66E-59 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 7.2E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.4E-12 T 14-10-2018 IPR004176 Clp, N-terminal VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 SMART SM01086 656 745 1.2E-37 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Gene3D G3DSA:1.10.8.60 354 441 8.3E-35 T 14-10-2018 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Gene3D G3DSA:1.10.8.60 656 754 1.6E-30 T 14-10-2018 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 649 3.9E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 4.8E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Gene3D G3DSA:3.40.50.300 442 655 7.3E-75 T 14-10-2018 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.6E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.6E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.6E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.6E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 SUPERFAMILY SSF52540 171 425 4.38E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 SUPERFAMILY SSF52540 440 744 8.47E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1825 34330a7cfbf8d6361762fff2b34066c4 756 Gene3D G3DSA:1.10.1780.10 1 143 5.1E-43 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAB027_1330 9a51046a1a57f2a18d3065a8ac826140 189 Pfam PF04751 Protein of unknown function (DUF615) 18 168 1.4E-55 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VAB027_1330 9a51046a1a57f2a18d3065a8ac826140 189 Gene3D G3DSA:1.10.60.30 28 102 1.5E-27 T 14-10-2018 VAB027_1330 9a51046a1a57f2a18d3065a8ac826140 189 Gene3D G3DSA:1.10.60.30 104 177 6.2E-25 T 14-10-2018 VAB027_1330 9a51046a1a57f2a18d3065a8ac826140 189 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.538 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VAB027_1330 9a51046a1a57f2a18d3065a8ac826140 189 PIRSF PIRSF016183 1 176 3.7E-72 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VAB027_1330 9a51046a1a57f2a18d3065a8ac826140 189 SUPERFAMILY SSF158710 28 171 9.02E-52 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily VAB027_3600 53a265ee38fe1de791fb3f9fa35048d0 353 Pfam PF00483 Nucleotidyl transferase 125 347 1.0E-36 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAB027_3600 53a265ee38fe1de791fb3f9fa35048d0 353 SUPERFAMILY SSF53448 48 347 3.75E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3600 53a265ee38fe1de791fb3f9fa35048d0 353 SUPERFAMILY SSF54631 10 56 1.13E-6 T 14-10-2018 VAB027_3600 53a265ee38fe1de791fb3f9fa35048d0 353 Gene3D G3DSA:3.90.550.10 122 349 8.4E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3600 53a265ee38fe1de791fb3f9fa35048d0 353 Pfam PF00571 CBS domain 11 54 2.1E-6 T 14-10-2018 IPR000644 CBS domain VAB027_3600 53a265ee38fe1de791fb3f9fa35048d0 353 Gene3D G3DSA:3.10.580.10 1 115 1.0E-18 T 14-10-2018 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 SUPERFAMILY SSF48008 79 269 6.8E-56 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 Gene3D G3DSA:1.20.120.530 149 278 2.1E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 Gene3D G3DSA:1.20.120.530 80 148 1.4E-6 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 139.031 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 SMART SM00345 12 71 1.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 Pfam PF07840 FadR C-terminal domain 72 274 5.4E-68 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 SUPERFAMILY SSF46785 12 74 8.1E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2545 dba3c3faa2448ea9fd23c36aaa678923 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 8.0E-119 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VAB027_328 52aed9f5bb7cb4bb21d67b3a4ec24f13 797 SUPERFAMILY SSF53474 425 699 3.41E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_328 52aed9f5bb7cb4bb21d67b3a4ec24f13 797 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 269 1.3E-127 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VAB027_328 52aed9f5bb7cb4bb21d67b3a4ec24f13 797 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 783 1.2E-257 T 14-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family VAB027_328 52aed9f5bb7cb4bb21d67b3a4ec24f13 797 Gene3D G3DSA:3.40.50.1820 419 593 1.8E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 PIRSF PIRSF002162 1 177 4.6E-44 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.2E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 Gene3D G3DSA:3.90.930.12 83 177 2.5E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 SUPERFAMILY SSF56053 1 82 7.85E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.457 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 Gene3D G3DSA:3.90.930.12 1 82 2.5E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 Pfam PF00347 Ribosomal protein L6 11 82 3.8E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 Pfam PF00347 Ribosomal protein L6 91 164 1.3E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 SUPERFAMILY SSF56053 83 177 3.01E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_1288 51bc1b3b5c34925bb12a40dcd7ef4a9a 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 SUPERFAMILY SSF50249 397 473 1.94E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 Gene3D G3DSA:2.40.50.140 398 477 1.8E-12 T 14-10-2018 VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 Pfam PF00773 RNB domain 26 328 2.9E-93 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 SUPERFAMILY SSF50249 26 393 4.11E-114 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 Pfam PF00575 S1 RNA binding domain 393 474 4.8E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 ProSitePatterns PS01175 Ribonuclease II family signature. 296 320 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 SMART SM00955 21 329 1.2E-139 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 SMART SM00316 395 476 6.7E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_319 c59ce5b5e0401680c65be7f9026cb1c6 477 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 24 474 9.4E-141 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.2E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.6E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 9.4E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.8E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.3 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 5.7E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 5.9E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 863 0.0 T 14-10-2018 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.723 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Gene3D G3DSA:3.30.1360.40 236 332 2.2E-236 T 14-10-2018 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Gene3D G3DSA:1.10.268.10 369 492 2.2E-236 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 SUPERFAMILY SSF56719 30 520 1.44E-187 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Gene3D G3DSA:2.120.10.90 534 865 1.0E-123 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 SMART SM00434 11 498 0.0 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Gene3D G3DSA:3.90.199.10 33 520 2.2E-236 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 8.0E-159 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_1934 f8a306298dd92cb5f634a0a9b35df952 894 SUPERFAMILY SSF101904 532 873 1.7E-106 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAB027_151 ad35e489cc99bfd4473e9530bd591c6f 176 Gene3D G3DSA:3.40.50.300 2 168 9.4E-8 T 14-10-2018 VAB027_151 ad35e489cc99bfd4473e9530bd591c6f 176 SUPERFAMILY SSF52540 3 170 8.09E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_151 ad35e489cc99bfd4473e9530bd591c6f 176 Pfam PF13521 AAA domain 4 164 1.2E-35 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain VAB027_240 b0e0facc00fd9de41b9e722093794155 144 SMART SM00450 40 138 1.6E-19 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_240 b0e0facc00fd9de41b9e722093794155 144 SUPERFAMILY SSF52821 15 143 1.7E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_240 b0e0facc00fd9de41b9e722093794155 144 Pfam PF00581 Rhodanese-like domain 42 135 3.3E-16 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_240 b0e0facc00fd9de41b9e722093794155 144 Gene3D G3DSA:3.40.250.10 22 143 1.3E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_754 cffd339bc50959cffbdcbd290295237d 440 Pfam PF13175 AAA ATPase domain 1 367 2.2E-31 T 14-10-2018 VAB027_754 cffd339bc50959cffbdcbd290295237d 440 SUPERFAMILY SSF52540 1 371 4.84E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_754 cffd339bc50959cffbdcbd290295237d 440 PIRSF PIRSF034888 1 175 9.9E-16 T 14-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 VAB027_754 cffd339bc50959cffbdcbd290295237d 440 PIRSF PIRSF034888 196 432 2.5E-33 T 14-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 VAB027_754 cffd339bc50959cffbdcbd290295237d 440 Gene3D G3DSA:3.40.50.300 1 379 3.7E-17 T 14-10-2018 VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.6E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Gene3D G3DSA:1.10.8.60 166 241 6.4E-24 T 14-10-2018 VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 SUPERFAMILY SSF52540 11 239 1.51E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Pfam PF16193 AAA C-terminal domain 192 268 2.3E-20 T 14-10-2018 IPR032423 AAA C-terminal domain VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Gene3D G3DSA:1.10.3710.10 347 448 1.6E-37 T 14-10-2018 VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 SMART SM00382 50 166 9.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 SUPERFAMILY SSF48019 253 435 5.67E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 7.5E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Gene3D G3DSA:1.20.272.10 242 346 6.0E-43 T 14-10-2018 VAB027_1789 c9cf02c81836ebea8dca01ffb0832420 449 Gene3D G3DSA:3.40.50.300 2 165 1.3E-48 T 14-10-2018 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 SUPERFAMILY SSF53822 58 318 1.06E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 Pfam PF13377 Periplasmic binding protein-like domain 169 328 5.5E-28 T 14-10-2018 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 SUPERFAMILY SSF47413 1 60 1.9E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 Gene3D G3DSA:1.10.260.40 1 59 1.1E-20 T 14-10-2018 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 Gene3D G3DSA:3.40.50.2300 164 286 3.2E-61 T 14-10-2018 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 Gene3D G3DSA:3.40.50.2300 65 309 3.2E-61 T 14-10-2018 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 SMART SM00354 1 71 8.4E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_512 93faa3170bd280cd8f37459de8deb47e 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.0E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_793 6c7bf02dd5761a197266ac0e03863e48 170 Pfam PF07883 Cupin domain 48 118 6.5E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VAB027_793 6c7bf02dd5761a197266ac0e03863e48 170 Gene3D G3DSA:2.60.120.10 11 147 7.8E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_793 6c7bf02dd5761a197266ac0e03863e48 170 SUPERFAMILY SSF51182 5 166 6.63E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_3287 a6e135ec1de046b2555afd4a32e0ad9b 524 Pfam PF04262 Glutamate-cysteine ligase 13 378 3.5E-168 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAB027_3287 a6e135ec1de046b2555afd4a32e0ad9b 524 Gene3D G3DSA:3.30.590.20 17 523 7.1E-195 T 14-10-2018 VAB027_3287 a6e135ec1de046b2555afd4a32e0ad9b 524 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 515 9.1E-217 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAB027_3287 a6e135ec1de046b2555afd4a32e0ad9b 524 SUPERFAMILY SSF55931 8 513 3.86E-202 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VAB027_3287 a6e135ec1de046b2555afd4a32e0ad9b 524 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 524 224.748 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAB027_30 9d5217df35605fec9b459e19bf104983 481 Pfam PF02386 Cation transport protein 45 475 1.4E-48 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VAB027_30 9d5217df35605fec9b459e19bf104983 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.4E-106 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAB027_30 9d5217df35605fec9b459e19bf104983 481 PIRSF PIRSF006247 1 481 7.2E-167 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 2.4E-139 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 Gene3D G3DSA:1.10.246.130 282 407 2.5E-37 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 SUPERFAMILY SSF56235 40 583 1.91E-172 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 3.0E-64 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 1.4E-165 T 14-10-2018 VAB027_3676 55e13994c175fe418430dcafdcaef647 584 Gene3D G3DSA:3.60.20.40 408 584 2.1E-57 T 14-10-2018 VAB027_419 7dbfbd631db3c55f81cb08f3545f470e 229 SUPERFAMILY SSF161098 10 202 8.63E-37 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_419 7dbfbd631db3c55f81cb08f3545f470e 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 1.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_419 7dbfbd631db3c55f81cb08f3545f470e 229 Gene3D G3DSA:1.10.3720.10 2 218 6.4E-46 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_419 7dbfbd631db3c55f81cb08f3545f470e 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 4.1E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_3128 1b915ea32a3a55c2919c4da768eb2aa0 108 Gene3D G3DSA:3.30.160.100 1 106 1.3E-32 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAB027_3128 1b915ea32a3a55c2919c4da768eb2aa0 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 7.2E-30 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAB027_3128 1b915ea32a3a55c2919c4da768eb2aa0 108 SUPERFAMILY SSF69754 1 104 1.57E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAB027_3128 1b915ea32a3a55c2919c4da768eb2aa0 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.0E-21 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 Gene3D G3DSA:2.40.50.140 1 124 3.5E-63 T 14-10-2018 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.5E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PIRSF PIRSF002133 1 124 8.4E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.557 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.2E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3473 e7c5a46bfe4c3264e7058a488094437b 124 SUPERFAMILY SSF50249 3 123 1.03E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 SUPERFAMILY SSF52540 324 760 1.93E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 SUPERFAMILY SSF52540 240 529 5.65E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 231 1.4E-37 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 129 751 6.9E-132 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 SMART SM00487 285 509 1.9E-9 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 Gene3D G3DSA:3.40.50.300 288 496 2.7E-33 T 14-10-2018 VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 Pfam PF04851 Type III restriction enzyme, res subunit 290 482 1.4E-13 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 Pfam PF11867 Domain of unknown function (DUF3387) 749 1084 3.6E-95 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 VAB027_1462 28fdcd5f0a7f168cec07d673b8acce87 1090 Gene3D G3DSA:3.90.1570.50 102 283 3.7E-22 T 14-10-2018 VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 Gene3D G3DSA:3.40.630.30 3 145 5.7E-26 T 14-10-2018 VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 Gene3D G3DSA:3.10.129.10 147 298 6.5E-43 T 14-10-2018 VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.1E-49 T 14-10-2018 IPR012660 Thioesterase, putative VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 Pfam PF13673 Acetyltransferase (GNAT) domain 66 144 4.4E-11 T 14-10-2018 IPR000182 GNAT domain VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 1.8E-43 T 14-10-2018 IPR012660 Thioesterase, putative VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 SUPERFAMILY SSF54637 154 296 1.79E-38 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_154 6f490eb1d9e4008ce7a6247a7c3fb738 308 SUPERFAMILY SSF55729 2 149 5.67E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3000 154369c56ecf65084c17ca425292b858 579 SMART SM00091 36 100 48.0 T 14-10-2018 IPR000014 PAS domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 SMART SM00091 277 344 0.0025 T 14-10-2018 IPR000014 PAS domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 571 1.8E-49 T 14-10-2018 IPR000160 GGDEF domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 Gene3D G3DSA:3.30.70.270 412 579 5.9E-52 T 14-10-2018 VAB027_3000 154369c56ecf65084c17ca425292b858 579 SUPERFAMILY SSF55785 264 390 2.62E-20 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3000 154369c56ecf65084c17ca425292b858 579 Pfam PF08448 PAS fold 283 393 5.6E-17 T 14-10-2018 IPR013656 PAS fold-4 VAB027_3000 154369c56ecf65084c17ca425292b858 579 SMART SM00086 209 251 480.0 T 14-10-2018 IPR001610 PAC motif VAB027_3000 154369c56ecf65084c17ca425292b858 579 SMART SM00086 350 392 0.0048 T 14-10-2018 IPR001610 PAC motif VAB027_3000 154369c56ecf65084c17ca425292b858 579 Gene3D G3DSA:3.30.450.20 262 406 3.4E-25 T 14-10-2018 VAB027_3000 154369c56ecf65084c17ca425292b858 579 Pfam PF13188 PAS domain 40 72 0.0042 T 14-10-2018 IPR000014 PAS domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 SUPERFAMILY SSF55785 149 249 5.93E-7 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3000 154369c56ecf65084c17ca425292b858 579 SMART SM00267 399 575 8.0E-72 T 14-10-2018 IPR000160 GGDEF domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 399 3.8E-15 T 14-10-2018 IPR000014 PAS domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 573 2.1E-47 T 14-10-2018 IPR000160 GGDEF domain VAB027_3000 154369c56ecf65084c17ca425292b858 579 SUPERFAMILY SSF55073 415 577 2.12E-46 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1403 e29f8439ed6903e802d9223e2eb56adf 149 Gene3D G3DSA:1.10.10.10 1 144 1.2E-53 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1403 e29f8439ed6903e802d9223e2eb56adf 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 7.3E-47 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VAB027_1403 e29f8439ed6903e802d9223e2eb56adf 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VAB027_1403 e29f8439ed6903e802d9223e2eb56adf 149 Pfam PF02082 Transcriptional regulator 1 83 3.1E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VAB027_1403 e29f8439ed6903e802d9223e2eb56adf 149 SUPERFAMILY SSF46785 2 132 1.07E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1403 e29f8439ed6903e802d9223e2eb56adf 149 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.4E-65 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 SUPERFAMILY SSF53681 112 258 6.32E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 230 8.4E-71 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 SUPERFAMILY SSF53681 8 108 3.53E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 Gene3D G3DSA:3.40.50.1860 11 232 1.2E-82 T 14-10-2018 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 Gene3D G3DSA:3.40.50.1860 99 208 1.2E-82 T 14-10-2018 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 5.1E-26 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 Hamap MF_00258 Glutamate racemase [murI]. 7 254 33.659 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_137 9e5e2f1adf5d7425470d212f70012042 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_594 158ce17e77af655cf31e610ff39f1165 53 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 2.7E-27 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VAB027_594 158ce17e77af655cf31e610ff39f1165 53 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 49 3.0E-21 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VAB027_594 158ce17e77af655cf31e610ff39f1165 53 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 18.163 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VAB027_2030 002329bb061652f6932912627a623ea4 976 SUPERFAMILY SSF63829 34 222 2.13E-5 T 14-10-2018 VAB027_2030 002329bb061652f6932912627a623ea4 976 Gene3D G3DSA:3.30.70.270 792 965 4.3E-46 T 14-10-2018 VAB027_2030 002329bb061652f6932912627a623ea4 976 Pfam PF00990 Diguanylate cyclase, GGDEF domain 809 962 1.5E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_2030 002329bb061652f6932912627a623ea4 976 Gene3D G3DSA:2.130.10.10 215 371 3.1E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_2030 002329bb061652f6932912627a623ea4 976 Gene3D G3DSA:2.130.10.10 372 636 1.5E-48 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_2030 002329bb061652f6932912627a623ea4 976 Pfam PF07494 Two component regulator propeller 462 482 0.0071 T 14-10-2018 IPR011110 Two component regulator propeller VAB027_2030 002329bb061652f6932912627a623ea4 976 Pfam PF07494 Two component regulator propeller 418 441 2.2E-4 T 14-10-2018 IPR011110 Two component regulator propeller VAB027_2030 002329bb061652f6932912627a623ea4 976 Pfam PF07494 Two component regulator propeller 46 68 5.2E-5 T 14-10-2018 IPR011110 Two component regulator propeller VAB027_2030 002329bb061652f6932912627a623ea4 976 SUPERFAMILY SSF55073 812 964 1.49E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2030 002329bb061652f6932912627a623ea4 976 Gene3D G3DSA:2.60.40.10 640 756 2.4E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2030 002329bb061652f6932912627a623ea4 976 SMART SM00267 796 966 6.9E-32 T 14-10-2018 IPR000160 GGDEF domain VAB027_2030 002329bb061652f6932912627a623ea4 976 Pfam PF07495 Y_Y_Y domain 683 745 8.2E-18 T 14-10-2018 IPR011123 Two component regulator three Y VAB027_2030 002329bb061652f6932912627a623ea4 976 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 965 4.7E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_2030 002329bb061652f6932912627a623ea4 976 Gene3D G3DSA:2.130.10.10 33 199 6.6E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_2030 002329bb061652f6932912627a623ea4 976 SUPERFAMILY SSF63829 388 577 2.35E-14 T 14-10-2018 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 SUPERFAMILY SSF47757 6 78 4.05E-19 T 14-10-2018 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 SMART SM00138 13 276 4.7E-87 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 Gene3D G3DSA:3.40.50.150 78 276 4.0E-63 T 14-10-2018 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 66 4.0E-13 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PIRSF PIRSF000410 1 276 7.9E-106 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 SUPERFAMILY SSF53335 79 274 3.75E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 2.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 2.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 2.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 2.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 2.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 2.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 Gene3D G3DSA:1.10.155.10 1 77 2.3E-21 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VAB027_1041 3ed7dfeedbb4f1be023a797caa787e79 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 273 3.0E-59 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 Gene3D G3DSA:1.10.579.10 283 415 1.3E-51 T 14-10-2018 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 PRINTS PR00147 DNA photolyase signature 306 322 4.0E-12 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 PRINTS PR00147 DNA photolyase signature 365 379 4.0E-12 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 PRINTS PR00147 DNA photolyase signature 326 344 4.0E-12 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 Gene3D G3DSA:3.40.50.620 1 118 3.1E-16 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 Pfam PF03441 FAD binding domain of DNA photolyase 259 403 6.8E-42 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 1 405 8.7E-182 T 14-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 Gene3D G3DSA:1.25.40.80 120 279 7.5E-45 T 14-10-2018 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 SUPERFAMILY SSF48173 179 405 3.14E-71 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 Pfam PF00875 DNA photolyase 1 148 1.1E-18 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VAB027_2467 25a0d478675436d68d3a2e28c0370ec3 446 SUPERFAMILY SSF52425 1 174 3.53E-27 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 SUPERFAMILY SSF48557 5 455 1.73E-137 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 Pfam PF00206 Lyase 13 337 3.6E-93 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VAB027_2213 a766ac2225e990296a646295dec72b8c 461 Gene3D G3DSA:1.20.200.10 134 402 5.8E-98 T 14-10-2018 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 Gene3D G3DSA:1.10.275.10 6 133 9.0E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VAB027_2213 a766ac2225e990296a646295dec72b8c 461 Gene3D G3DSA:1.10.40.30 403 461 8.3E-19 T 14-10-2018 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.1E-31 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.1E-31 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.1E-31 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.1E-31 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_2213 a766ac2225e990296a646295dec72b8c 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 73.953 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.3E-6 T 14-10-2018 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.3E-6 T 14-10-2018 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.3E-6 T 14-10-2018 VAB027_2213 a766ac2225e990296a646295dec72b8c 461 Pfam PF10415 Fumarase C C-terminus 403 455 3.5E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 SMART SM00283 300 561 1.5E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 Pfam PF00672 HAMP domain 240 282 2.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 SMART SM00304 233 285 1.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 376 526 2.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 SUPERFAMILY SSF58104 253 560 1.1E-66 T 14-10-2018 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 2.6E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 2.6E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 2.6E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2079 216a4defd6d1a3a8f7bd5f54248b72bc 563 Gene3D G3DSA:1.10.287.950 232 563 5.2E-69 T 14-10-2018 VAB027_2939 adeb11e31eef2da30cab7c69c0b0d443 462 SUPERFAMILY SSF103473 14 453 5.75E-38 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2939 adeb11e31eef2da30cab7c69c0b0d443 462 Pfam PF07690 Major Facilitator Superfamily 25 289 5.8E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_2939 adeb11e31eef2da30cab7c69c0b0d443 462 Gene3D G3DSA:1.20.1250.20 15 223 1.5E-11 T 14-10-2018 VAB027_2939 adeb11e31eef2da30cab7c69c0b0d443 462 Gene3D G3DSA:1.20.1250.20 248 446 4.0E-9 T 14-10-2018 VAB027_3007 2ef64500fc22c59df4c5f2584fae8521 121 Pfam PF07386 Protein of unknown function (DUF1499) 7 112 1.3E-23 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VAB027_3007 2ef64500fc22c59df4c5f2584fae8521 121 PIRSF PIRSF026426 1 119 9.0E-45 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VAB027_3626 feb8f005abda5da6834bb3091e40de8a 259 Pfam PF00535 Glycosyl transferase family 2 8 128 1.0E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAB027_3626 feb8f005abda5da6834bb3091e40de8a 259 Gene3D G3DSA:3.90.550.10 2 208 4.1E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3626 feb8f005abda5da6834bb3091e40de8a 259 SUPERFAMILY SSF53448 3 146 4.97E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.1150 80 157 3.2E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 5.0E-62 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 79 162 5.15E-27 T 14-10-2018 VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF13710 ACT domain 11 73 2.7E-17 T 14-10-2018 VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 1 75 3.31E-22 T 14-10-2018 VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.260 1 79 5.0E-32 T 14-10-2018 VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 14-10-2018 VAB027_3106 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.5E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAB027_1989 de74260c763bde05c9614ecb0fb4944a 543 SMART SM00283 280 541 2.5E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1989 de74260c763bde05c9614ecb0fb4944a 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 166 1.5E-17 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAB027_1989 de74260c763bde05c9614ecb0fb4944a 543 SUPERFAMILY SSF58104 235 542 9.02E-73 T 14-10-2018 VAB027_1989 de74260c763bde05c9614ecb0fb4944a 543 Gene3D G3DSA:1.10.287.950 211 543 3.9E-75 T 14-10-2018 VAB027_1989 de74260c763bde05c9614ecb0fb4944a 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 505 8.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1989 de74260c763bde05c9614ecb0fb4944a 543 SMART SM00304 211 265 4.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_790 ca1fbc0f1ea0a176b0ee8498cc26a1ca 180 SUPERFAMILY SSF55729 2 138 1.17E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_790 ca1fbc0f1ea0a176b0ee8498cc26a1ca 180 Gene3D G3DSA:3.40.630.30 5 176 2.7E-28 T 14-10-2018 VAB027_790 ca1fbc0f1ea0a176b0ee8498cc26a1ca 180 Pfam PF13508 Acetyltransferase (GNAT) domain 53 132 2.1E-10 T 14-10-2018 IPR000182 GNAT domain VAB027_2481 6764a0dfe3509ecfc90ba1bbc1cbae54 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.455 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VAB027_2481 6764a0dfe3509ecfc90ba1bbc1cbae54 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.0E-91 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VAB027_2481 6764a0dfe3509ecfc90ba1bbc1cbae54 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 4.7E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 SMART SM00470 40 130 1.3E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 214 2.6E-58 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 Gene3D G3DSA:1.10.10.2830 117 230 6.2E-35 T 14-10-2018 VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 SUPERFAMILY SSF110849 41 132 3.4E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 Gene3D G3DSA:3.90.1530.30 53 116 6.0E-28 T 14-10-2018 VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 Pfam PF02195 ParB-like nuclease domain 43 130 7.0E-29 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VAB027_3726 168d1443a4e9daac487eaf633b55d5ff 293 SUPERFAMILY SSF109709 122 230 1.31E-33 T 14-10-2018 VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 SUPERFAMILY SSF69279 182 347 3.68E-49 T 14-10-2018 VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 Gene3D G3DSA:3.55.50.10 96 180 2.7E-120 T 14-10-2018 VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 Gene3D G3DSA:3.30.1920.10 204 280 2.7E-120 T 14-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 Pfam PF05954 Phage late control gene D protein (GPD) 27 301 4.3E-15 T 14-10-2018 VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 SUPERFAMILY SSF69279 3 180 5.53E-57 T 14-10-2018 VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 PIRSF PIRSF004440 1 355 3.6E-99 T 14-10-2018 IPR026276 Baseplate protein GpP VAB027_1599 54419332b04de1e82421ef9f95eb0c89 358 Gene3D G3DSA:2.30.300.10 7 339 2.7E-120 T 14-10-2018 VAB027_3264 c4f7517794c3cd2670730cf47ca2ef8a 107 Pfam PF02021 Uncharacterised protein family UPF0102 1 90 4.5E-27 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VAB027_3264 c4f7517794c3cd2670730cf47ca2ef8a 107 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 105 2.4E-30 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VAB027_3264 c4f7517794c3cd2670730cf47ca2ef8a 107 SUPERFAMILY SSF52980 2 93 2.15E-16 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAB027_3264 c4f7517794c3cd2670730cf47ca2ef8a 107 Gene3D G3DSA:3.40.1350.10 1 107 2.4E-31 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VAB027_3264 c4f7517794c3cd2670730cf47ca2ef8a 107 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 103 17.664 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Pfam PF01627 Hpt domain 3 99 1.0E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SMART SM00260 555 694 3.1E-38 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Gene3D G3DSA:1.10.287.560 311 374 1.8E-17 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Gene3D G3DSA:2.30.30.40 563 690 6.8E-37 T 14-10-2018 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Pfam PF01584 CheW-like domain 570 696 1.9E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SMART SM00073 1 98 5.9E-25 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 562 2.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SMART SM00387 419 563 2.0E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 312 374 1.3E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SUPERFAMILY SSF55874 378 561 7.86E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SUPERFAMILY SSF47226 1 125 6.02E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SUPERFAMILY SSF47384 312 375 2.43E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SUPERFAMILY SSF50341 562 694 5.89E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Gene3D G3DSA:2.40.50.180 586 649 6.8E-37 T 14-10-2018 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Gene3D G3DSA:3.30.565.10 375 562 1.8E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 517 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 541 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 560 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 Gene3D G3DSA:1.20.120.160 1 141 1.4E-35 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_1037 540d8c1e25ac64ce3bf3e1d95effc452 711 SMART SM01231 311 374 1.9E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 6.0E-129 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 Gene3D G3DSA:3.40.50.10490 1 220 1.9E-82 T 14-10-2018 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.685 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 SUPERFAMILY SSF53697 8 250 1.45E-68 T 14-10-2018 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 Gene3D G3DSA:1.10.8.1080 221 299 1.3E-29 T 14-10-2018 VAB027_3665 a3edea6b14966b775fdd40a71b77b9d4 300 Pfam PF13580 SIS domain 39 166 1.5E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Gene3D G3DSA:1.20.120.1510 452 565 4.1E-32 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Gene3D G3DSA:1.20.120.330 816 948 7.4E-43 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Gene3D G3DSA:3.30.460.10 115 288 2.4E-66 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 SUPERFAMILY SSF81593 291 440 5.81E-46 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 31 948 19.486 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 SUPERFAMILY SSF81593 821 947 3.92E-31 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Gene3D G3DSA:1.20.120.330 289 444 1.0E-57 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 SUPERFAMILY SSF81301 24 290 2.38E-89 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Gene3D G3DSA:3.30.460.100 566 815 9.0E-92 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Gene3D G3DSA:1.10.4050.10 5 113 2.2E-14 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Pfam PF08335 GlnD PII-uridylyltransferase 846 917 4.4E-7 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Pfam PF08335 GlnD PII-uridylyltransferase 301 440 9.5E-48 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 SUPERFAMILY SSF81301 529 819 6.07E-87 T 14-10-2018 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 1.4E-100 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VAB027_3064 83f18f4b2b87ab32c46120fcd042c879 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 280 5.5E-100 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 Gene3D G3DSA:3.40.50.2300 55 306 1.7E-68 T 14-10-2018 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 SUPERFAMILY SSF47413 2 59 1.58E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 SUPERFAMILY SSF53822 61 314 6.0E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 SMART SM00354 1 71 8.4E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.1E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 Gene3D G3DSA:1.10.260.40 1 54 1.8E-22 T 14-10-2018 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 Pfam PF13377 Periplasmic binding protein-like domain 168 320 2.2E-31 T 14-10-2018 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 Gene3D G3DSA:3.40.50.2300 160 289 1.7E-68 T 14-10-2018 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1962 d4033254812b15d7f2b3f131558a02e1 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_353 57d37db3a90bb904a28a5c567e73716c 292 Pfam PF03466 LysR substrate binding domain 101 283 2.3E-14 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_353 57d37db3a90bb904a28a5c567e73716c 292 Gene3D G3DSA:1.10.10.10 1 88 9.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_353 57d37db3a90bb904a28a5c567e73716c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_353 57d37db3a90bb904a28a5c567e73716c 292 SUPERFAMILY SSF46785 1 83 5.44E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_353 57d37db3a90bb904a28a5c567e73716c 292 SUPERFAMILY SSF53850 94 289 3.44E-22 T 14-10-2018 VAB027_353 57d37db3a90bb904a28a5c567e73716c 292 Gene3D G3DSA:3.40.190.290 92 275 4.7E-34 T 14-10-2018 VAB027_105 6ab3b79afabb0e37a92958b9b6792da8 843 PIRSF PIRSF001444 1 843 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VAB027_105 6ab3b79afabb0e37a92958b9b6792da8 843 Pfam PF12633 Adenylate cyclase NT domain 5 198 7.7E-76 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VAB027_105 6ab3b79afabb0e37a92958b9b6792da8 843 Pfam PF01295 Adenylate cyclase, class-I 226 829 1.6E-255 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VAB027_3325 25b96ed2b9f77877a7ce6909b2e03853 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 7.1E-37 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAB027_3325 25b96ed2b9f77877a7ce6909b2e03853 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 6.6E-30 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAB027_3325 25b96ed2b9f77877a7ce6909b2e03853 117 SMART SM00905 4 114 2.0E-49 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAB027_3325 25b96ed2b9f77877a7ce6909b2e03853 117 SUPERFAMILY SSF55620 1 116 2.39E-37 T 14-10-2018 VAB027_3325 25b96ed2b9f77877a7ce6909b2e03853 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.2E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAB027_3325 25b96ed2b9f77877a7ce6909b2e03853 117 Gene3D G3DSA:3.30.1130.10 1 117 2.0E-48 T 14-10-2018 VAB027_22 c17e6ef123a6c68a37293886d988805a 294 Pfam PF01553 Acyltransferase 73 226 4.8E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_22 c17e6ef123a6c68a37293886d988805a 294 SUPERFAMILY SSF69593 18 249 6.8E-27 T 14-10-2018 VAB027_22 c17e6ef123a6c68a37293886d988805a 294 SMART SM00563 85 227 2.6E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 Pfam PF00875 DNA photolyase 3 164 2.5E-48 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 SUPERFAMILY SSF48173 191 468 3.79E-108 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 PRINTS PR00147 DNA photolyase signature 343 361 1.2E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 PRINTS PR00147 DNA photolyase signature 323 339 1.2E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 PRINTS PR00147 DNA photolyase signature 382 396 1.2E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 3.2E-83 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 SUPERFAMILY SSF52425 2 177 2.75E-51 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 Gene3D G3DSA:1.10.579.10 291 469 6.0E-81 T 14-10-2018 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 Gene3D G3DSA:1.25.40.80 133 284 1.7E-77 T 14-10-2018 VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VAB027_967 aa65f61bfd6642eecdc4f54e5161556a 469 Gene3D G3DSA:3.40.50.620 3 202 1.7E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1758 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 Pfam PF01161 Phosphatidylethanolamine-binding protein 40 177 6.0E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VAB027_1758 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 SUPERFAMILY SSF49777 23 179 9.42E-50 T 14-10-2018 IPR036610 PEBP-like superfamily VAB027_1758 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 177 2.9E-37 T 14-10-2018 IPR005247 YbhB/YbcL VAB027_1758 71a53b5cbbfb28ebdb0dcdfb2ea9535a 180 Gene3D G3DSA:3.90.280.10 15 179 4.5E-52 T 14-10-2018 IPR036610 PEBP-like superfamily VAB027_1173 64b469b3c2a02e3fc9f6c50729fa84c3 106 Pfam PF01906 Putative heavy-metal-binding 1 105 8.6E-42 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 VAB027_1173 64b469b3c2a02e3fc9f6c50729fa84c3 106 SUPERFAMILY SSF117782 1 106 5.23E-39 T 14-10-2018 IPR035439 UPF0145 domain superfamily VAB027_1173 64b469b3c2a02e3fc9f6c50729fa84c3 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.238 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 VAB027_1173 64b469b3c2a02e3fc9f6c50729fa84c3 106 Gene3D G3DSA:3.30.110.70 2 106 1.8E-44 T 14-10-2018 VAB027_1731 013c8245ebcfdb006a57cfa966104b38 363 SUPERFAMILY SSF52172 22 144 1.31E-35 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1731 013c8245ebcfdb006a57cfa966104b38 363 Gene3D G3DSA:3.60.40.10 160 329 2.2E-8 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAB027_1731 013c8245ebcfdb006a57cfa966104b38 363 SMART SM00448 20 132 1.2E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1731 013c8245ebcfdb006a57cfa966104b38 363 Gene3D G3DSA:3.40.50.2300 9 147 2.8E-36 T 14-10-2018 VAB027_1731 013c8245ebcfdb006a57cfa966104b38 363 Pfam PF00072 Response regulator receiver domain 22 132 4.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SMART SM00257 422 466 9.4E-14 T 14-10-2018 IPR018392 LysM domain VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SMART SM00257 480 524 1.6E-11 T 14-10-2018 IPR018392 LysM domain VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SMART SM00257 348 391 1.0E-13 T 14-10-2018 IPR018392 LysM domain VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF54106 421 466 2.75E-11 T 14-10-2018 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:3.10.350.10 409 474 6.6E-15 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:3.10.350.10 337 401 9.8E-15 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01476 LysM domain 349 391 2.2E-12 T 14-10-2018 IPR018392 LysM domain VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01476 LysM domain 481 523 1.6E-12 T 14-10-2018 IPR018392 LysM domain VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01476 LysM domain 423 466 5.2E-12 T 14-10-2018 IPR018392 LysM domain VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 138 166 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:1.10.530.10 115 266 3.1E-30 T 14-10-2018 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF54106 478 525 1.57E-10 T 14-10-2018 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01464 Transglycosylase SLT domain 131 231 2.4E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF54106 347 391 8.89E-11 T 14-10-2018 VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:3.10.350.10 478 526 3.9E-15 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_2879 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF53955 116 275 8.04E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_1990 3ad2328608554c8bc3e20cbc6c55578d 470 PIRSF PIRSF002457 1 470 6.0E-108 T 14-10-2018 IPR030676 Citrate carrier CitT-related VAB027_1990 3ad2328608554c8bc3e20cbc6c55578d 470 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 2.2E-76 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAB027_1990 3ad2328608554c8bc3e20cbc6c55578d 470 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 1.2E-47 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAB027_3268 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF52833 11 110 5.91E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3268 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 194 2.5E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAB027_3268 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.9E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAB027_3268 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF47616 82 208 1.56E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAB027_3268 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:1.20.1050.10 89 193 1.4E-76 T 14-10-2018 VAB027_3268 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:3.40.30.10 11 202 1.4E-76 T 14-10-2018 VAB027_1057 2c02bcab93359fc49a642d860e4570c5 605 Pfam PF08308 PEGA domain 296 362 5.6E-24 T 14-10-2018 IPR013229 PEGA VAB027_1057 2c02bcab93359fc49a642d860e4570c5 605 Pfam PF03781 Sulfatase-modifying factor enzyme 1 382 603 2.5E-56 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VAB027_1057 2c02bcab93359fc49a642d860e4570c5 605 SUPERFAMILY SSF56436 383 604 8.48E-54 T 14-10-2018 IPR016187 C-type lectin fold VAB027_1057 2c02bcab93359fc49a642d860e4570c5 605 Gene3D G3DSA:3.90.1580.10 383 604 1.5E-54 T 14-10-2018 VAB027_3710 789cda4b4b3b282033d31d1fc3d54dcd 485 PIRSF PIRSF006247 1 485 3.8E-179 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAB027_3710 789cda4b4b3b282033d31d1fc3d54dcd 485 Pfam PF02386 Cation transport protein 39 477 1.6E-91 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VAB027_3710 789cda4b4b3b282033d31d1fc3d54dcd 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 4.6E-119 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:1.10.274.10 190 314 1.7E-57 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF52009 293 413 1.02E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 706 2.6E-93 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF47831 202 311 9.29E-27 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 SMART SM00065 17 163 2.7E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF51621 419 714 1.2E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 728 5.0E-134 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 2.2E-23 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:3.50.30.10 173 399 1.7E-57 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 3.5E-16 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:3.30.450.40 1 162 4.9E-42 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Gene3D G3DSA:3.20.20.60 400 739 1.6E-103 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 SUPERFAMILY SSF55781 2 158 6.32E-32 T 14-10-2018 VAB027_3175 e7a0da35c72ece6248912edaa0f0520f 748 Pfam PF01590 GAF domain 20 151 1.3E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Gene3D G3DSA:3.90.105.10 31 178 2.4E-142 T 14-10-2018 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 2.0E-43 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 6.2E-32 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Gene3D G3DSA:2.40.340.10 332 401 2.4E-142 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 SMART SM00852 184 321 2.5E-41 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 8.1E-22 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 3.3E-25 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 SUPERFAMILY SSF53218 181 325 9.55E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Gene3D G3DSA:2.170.190.11 53 145 2.4E-142 T 14-10-2018 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 SUPERFAMILY SSF63882 7 180 5.23E-55 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 SUPERFAMILY SSF63867 332 410 4.19E-23 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_549 ed6108d61ca6879615dff281482d5fb2 411 Gene3D G3DSA:3.40.980.10 179 331 2.4E-142 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 SUPERFAMILY SSF52833 2 241 3.88E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 1.3E-39 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 Gene3D G3DSA:3.40.30.10 171 241 1.1E-23 T 14-10-2018 VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 Gene3D G3DSA:3.40.30.10 4 165 1.5E-63 T 14-10-2018 VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 Pfam PF08534 Redoxin 5 160 7.5E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 PRINTS PR00160 Glutaredoxin signature 228 241 2.7E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 PRINTS PR00160 Glutaredoxin signature 214 227 2.7E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 PRINTS PR00160 Glutaredoxin signature 173 191 2.7E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_253 e0ffc9ef0ada1fe47a68349530fdfe61 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAB027_545 420d1ce231adb762b0126b96ea4d717a 331 Pfam PF04198 Putative sugar-binding domain 65 319 6.0E-80 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VAB027_545 420d1ce231adb762b0126b96ea4d717a 331 Gene3D G3DSA:1.10.10.60 8 58 1.7E-18 T 14-10-2018 VAB027_545 420d1ce231adb762b0126b96ea4d717a 331 SUPERFAMILY SSF100950 69 319 2.85E-66 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_545 420d1ce231adb762b0126b96ea4d717a 331 Gene3D G3DSA:3.40.50.1360 59 324 1.5E-82 T 14-10-2018 VAB027_395 b4a06f1c3a222bafb50157fde1430834 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_395 b4a06f1c3a222bafb50157fde1430834 225 Gene3D G3DSA:3.40.50.300 3 224 1.1E-68 T 14-10-2018 VAB027_395 b4a06f1c3a222bafb50157fde1430834 225 SMART SM00382 34 220 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_395 b4a06f1c3a222bafb50157fde1430834 225 SUPERFAMILY SSF52540 5 223 2.79E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_395 b4a06f1c3a222bafb50157fde1430834 225 Pfam PF00005 ABC transporter 25 171 6.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1616 315724b039dff899746f31f0d540474c 446 Gene3D G3DSA:3.40.50.12780 37 348 8.1E-72 T 14-10-2018 VAB027_1616 315724b039dff899746f31f0d540474c 446 Pfam PF00501 AMP-binding enzyme 106 274 1.6E-5 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_1616 315724b039dff899746f31f0d540474c 446 SUPERFAMILY SSF56801 97 437 4.19E-19 T 14-10-2018 VAB027_1822 740d389fb5ffd505b93662eb2170f6eb 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VAB027_1822 740d389fb5ffd505b93662eb2170f6eb 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 VAB027_1822 740d389fb5ffd505b93662eb2170f6eb 741 Gene3D G3DSA:3.40.718.10 415 650 1.2E-9 T 14-10-2018 VAB027_1822 740d389fb5ffd505b93662eb2170f6eb 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VAB027_1822 740d389fb5ffd505b93662eb2170f6eb 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VAB027_2785 36ff12694824c186526b787c81b330e2 339 Pfam PF06804 NlpB/DapX lipoprotein 35 335 3.5E-103 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein VAB027_2785 36ff12694824c186526b787c81b330e2 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 36.826 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VAB027_2785 36ff12694824c186526b787c81b330e2 339 Gene3D G3DSA:3.30.530.50 96 205 1.4E-12 T 14-10-2018 VAB027_2785 36ff12694824c186526b787c81b330e2 339 Gene3D G3DSA:3.30.310.170 220 339 1.8E-42 T 14-10-2018 VAB027_2785 36ff12694824c186526b787c81b330e2 339 PIRSF PIRSF026343 4 339 1.9E-152 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 Gene3D G3DSA:3.20.20.150 3 285 3.7E-110 T 14-10-2018 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 Hamap MF_00152 Probable endonuclease 4 [nfo]. 4 281 42.003 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 SMART SM00518 5 281 6.6E-119 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 217 233 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 9.2E-41 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 279 1.0E-105 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VAB027_2990 211049a95e9847a3d71d1d913f1398e5 286 SUPERFAMILY SSF51658 5 280 5.37E-99 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VAB027_2532 9b90e06c39185e9be96fa720fab7a379 691 Gene3D G3DSA:2.100.10.30 314 427 4.7E-23 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAB027_2532 9b90e06c39185e9be96fa720fab7a379 691 Pfam PF16458 Beta-prism lectin 317 450 4.2E-36 T 14-10-2018 IPR032496 Hemolysin, beta-prism lectin VAB027_2532 9b90e06c39185e9be96fa720fab7a379 691 SUPERFAMILY SSF69318 535 664 4.18E-5 T 14-10-2018 VAB027_2532 9b90e06c39185e9be96fa720fab7a379 691 SUPERFAMILY SSF69318 58 295 1.31E-20 T 14-10-2018 VAB027_2532 9b90e06c39185e9be96fa720fab7a379 691 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 3.0E-118 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.778 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 SUPERFAMILY SSF53720 2 449 1.7E-122 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 2.2E-224 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 Gene3D G3DSA:3.40.605.10 7 448 2.9E-139 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_274 c88293ce880ea13758e035cb8082f0c6 485 Gene3D G3DSA:3.40.309.10 247 436 2.9E-139 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 SUPERFAMILY SSF51316 237 377 5.23E-60 T 14-10-2018 IPR011057 Mss4-like superfamily VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 39 198 36.159 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 41 191 8.7E-52 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 Pfam PF01641 SelR domain 243 361 1.1E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 Gene3D G3DSA:2.170.150.20 232 378 4.6E-58 T 14-10-2018 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 Pfam PF01625 Peptide methionine sulfoxide reductase 41 192 1.3E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 370 9.8E-62 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 Gene3D G3DSA:3.30.1060.10 20 198 1.0E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 SUPERFAMILY SSF55068 21 204 7.98E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_551 5e40cd20b982bfa9510a16e6946351ed 378 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 239 362 35.183 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 Gene3D G3DSA:2.40.50.140 2 70 8.4E-27 T 14-10-2018 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 SUPERFAMILY SSF50249 4 69 8.36E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_316 80b18e176d1790c29d5e8c286234538b 70 SMART SM00357 6 70 5.1E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 PIRSF PIRSF002599 1 70 1.3E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_316 80b18e176d1790c29d5e8c286234538b 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 4.0E-26 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 Gene3D G3DSA:2.40.50.140 2 70 8.4E-27 T 14-10-2018 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 SUPERFAMILY SSF50249 4 69 8.36E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_302 80b18e176d1790c29d5e8c286234538b 70 SMART SM00357 6 70 5.1E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 PIRSF PIRSF002599 1 70 1.3E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_302 80b18e176d1790c29d5e8c286234538b 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 4.0E-26 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 Gene3D G3DSA:3.40.50.10490 13 507 3.2E-244 T 14-10-2018 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 SUPERFAMILY SSF53697 6 548 1.81E-226 T 14-10-2018 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 Gene3D G3DSA:1.10.1390.10 508 548 4.6E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.1E-254 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.93 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 Gene3D G3DSA:3.40.50.10490 99 292 3.2E-244 T 14-10-2018 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 8.5E-57 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 8.5E-57 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 8.5E-57 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 8.5E-57 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 8.5E-57 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3459 2f9ec610de33825f24c8048e0dc52bb8 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 8.5E-57 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 Pfam PF00005 ABC transporter 26 181 2.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 SUPERFAMILY SSF52540 5 252 2.08E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 Gene3D G3DSA:3.40.50.300 3 326 8.0E-91 T 14-10-2018 VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.4E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.8E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_3231 e7441acd99bad2dbb48e0c43a249bb15 327 SMART SM00382 34 231 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1038 ab21c7b7b348644d684adca75d2c1a2c 175 Gene3D G3DSA:2.30.30.40 31 158 1.1E-31 T 14-10-2018 VAB027_1038 ab21c7b7b348644d684adca75d2c1a2c 175 Gene3D G3DSA:2.40.50.180 46 163 1.1E-31 T 14-10-2018 VAB027_1038 ab21c7b7b348644d684adca75d2c1a2c 175 Pfam PF01584 CheW-like domain 30 166 2.6E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1038 ab21c7b7b348644d684adca75d2c1a2c 175 SUPERFAMILY SSF50341 28 166 2.35E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_1038 ab21c7b7b348644d684adca75d2c1a2c 175 SMART SM00260 25 164 8.0E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 Pfam PF00557 Metallopeptidase family M24 12 259 1.9E-52 T 14-10-2018 IPR000994 Peptidase M24 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.665 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 SUPERFAMILY SSF55920 3 268 9.55E-88 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 267 5.8E-90 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAB027_2902 76c9fe79454e2da53afab1f8c695cb66 280 Gene3D G3DSA:3.90.230.10 1 278 4.7E-105 T 14-10-2018 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 SUPERFAMILY SSF51395 1 336 2.13E-106 T 14-10-2018 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 Gene3D G3DSA:3.20.20.70 2 336 6.1E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 PIRSF PIRSF000164 10 336 1.2E-102 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.9E-147 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.3E-89 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VAB027_2138 ca5e0e71be73658bac12afb901ec779f 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.074 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VAB027_1734 e3127fc43e648ebd328d119ce751ee0f 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.659 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VAB027_1734 e3127fc43e648ebd328d119ce751ee0f 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 6.3E-75 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VAB027_1734 e3127fc43e648ebd328d119ce751ee0f 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 1.8E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAB027_1734 e3127fc43e648ebd328d119ce751ee0f 181 Gene3D G3DSA:3.40.50.2020 1 181 3.0E-68 T 14-10-2018 VAB027_1734 e3127fc43e648ebd328d119ce751ee0f 181 SUPERFAMILY SSF53271 11 178 7.95E-53 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_3028 be75e170b5453edcf759e026559029f9 353 Gene3D G3DSA:3.40.50.2000 161 318 4.7E-120 T 14-10-2018 VAB027_3028 be75e170b5453edcf759e026559029f9 353 Gene3D G3DSA:3.40.50.2000 8 160 4.7E-120 T 14-10-2018 VAB027_3028 be75e170b5453edcf759e026559029f9 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 338 8.3E-34 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VAB027_3028 be75e170b5453edcf759e026559029f9 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 8.1E-120 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3028 be75e170b5453edcf759e026559029f9 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 3.8E-47 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3028 be75e170b5453edcf759e026559029f9 353 SUPERFAMILY SSF53756 5 351 3.84E-125 T 14-10-2018 VAB027_3028 be75e170b5453edcf759e026559029f9 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 35.047 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1032 76b72c2a9c82b081763ba05923bd6f25 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 2.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1032 76b72c2a9c82b081763ba05923bd6f25 263 SUPERFAMILY SSF161098 65 253 3.66E-21 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1032 76b72c2a9c82b081763ba05923bd6f25 263 Gene3D G3DSA:1.10.3720.10 61 260 2.9E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1334 cb33f486bfb953f86c0c066a4b4fbe78 286 PIRSF PIRSF005052 1 286 2.3E-107 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VAB027_1334 cb33f486bfb953f86c0c066a4b4fbe78 286 Gene3D G3DSA:3.40.50.300 30 160 5.1E-5 T 14-10-2018 VAB027_1334 cb33f486bfb953f86c0c066a4b4fbe78 286 Pfam PF03668 P-loop ATPase protein family 1 284 5.5E-112 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VAB027_1334 cb33f486bfb953f86c0c066a4b4fbe78 286 SUPERFAMILY SSF52540 1 152 4.17E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1334 cb33f486bfb953f86c0c066a4b4fbe78 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 41.191 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 SUPERFAMILY SSF47729 3 95 7.95E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 SMART SM00411 3 92 4.6E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.4E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.4E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.4E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.1E-49 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.009 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.2E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_1904 64bf033548e04e9f5cfe4731c605413e 98 Gene3D G3DSA:4.10.520.10 1 98 6.8E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 SMART SM00283 376 637 4.6E-90 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 Gene3D G3DSA:3.30.450.20 155 284 1.8E-15 T 14-10-2018 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 SUPERFAMILY SSF58104 329 638 1.7E-79 T 14-10-2018 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 1.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 SMART SM00304 307 361 3.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 Gene3D G3DSA:1.10.287.950 306 638 9.5E-76 T 14-10-2018 VAB027_862 dea4cfb92373b664e73e6e8df3a9cd94 638 Pfam PF00672 HAMP domain 312 357 3.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1241 1bd14c41e883526a7653d26a798935df 237 SUPERFAMILY SSF47413 1 69 4.56E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1241 1bd14c41e883526a7653d26a798935df 237 Pfam PF00717 Peptidase S24-like 148 215 1.5E-11 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VAB027_1241 1bd14c41e883526a7653d26a798935df 237 SUPERFAMILY SSF51306 98 233 1.83E-21 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VAB027_1241 1bd14c41e883526a7653d26a798935df 237 SMART SM00530 9 64 1.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1241 1bd14c41e883526a7653d26a798935df 237 Pfam PF01381 Helix-turn-helix 10 64 7.7E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1241 1bd14c41e883526a7653d26a798935df 237 Gene3D G3DSA:1.10.260.40 1 68 6.2E-22 T 14-10-2018 VAB027_1241 1bd14c41e883526a7653d26a798935df 237 Gene3D G3DSA:2.10.109.10 109 234 6.8E-8 T 14-10-2018 VAB027_1821 886b017ff457a0218c7c82598bf8eafc 241 Gene3D G3DSA:3.30.70.1560 130 229 1.3E-40 T 14-10-2018 VAB027_1821 886b017ff457a0218c7c82598bf8eafc 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 240 3.7E-59 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_1821 886b017ff457a0218c7c82598bf8eafc 241 Pfam PF00849 RNA pseudouridylate synthase 66 210 2.2E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1821 886b017ff457a0218c7c82598bf8eafc 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_1821 886b017ff457a0218c7c82598bf8eafc 241 SUPERFAMILY SSF55120 64 240 4.8E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1821 886b017ff457a0218c7c82598bf8eafc 241 Gene3D G3DSA:3.30.70.580 54 129 3.5E-27 T 14-10-2018 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Gene3D G3DSA:3.40.1190.10 110 342 1.7E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 2.4E-24 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 SUPERFAMILY SSF53623 111 337 1.7E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 5.9E-181 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Gene3D G3DSA:3.40.1390.10 4 108 3.3E-29 T 14-10-2018 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Pfam PF08245 Mur ligase middle domain 117 318 2.2E-50 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 SUPERFAMILY SSF53244 340 491 8.39E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Pfam PF01225 Mur ligase family, catalytic domain 27 105 4.7E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Gene3D G3DSA:3.90.190.20 345 494 1.1E-54 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 SUPERFAMILY SSF63418 13 108 3.79E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VAB027_3033 4e0e80cbf78722ddd88f49dc057d75d7 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.502 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VAB027_1319 271c0002e4fb1dd77b7853cad33be700 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 2.0E-67 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_1319 271c0002e4fb1dd77b7853cad33be700 212 SUPERFAMILY SSF55068 3 207 2.22E-81 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_1319 271c0002e4fb1dd77b7853cad33be700 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.139 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_1319 271c0002e4fb1dd77b7853cad33be700 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 2.5E-66 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_1319 271c0002e4fb1dd77b7853cad33be700 212 Gene3D G3DSA:3.30.1060.10 3 211 8.3E-90 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAB027_1721 e0c97b9c04b0c325372d2ce1d491c09a 201 Gene3D G3DSA:3.40.50.300 11 201 2.5E-70 T 14-10-2018 VAB027_1721 e0c97b9c04b0c325372d2ce1d491c09a 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 7 26 3.9E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VAB027_1721 e0c97b9c04b0c325372d2ce1d491c09a 201 SUPERFAMILY SSF52540 12 201 5.32E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1721 e0c97b9c04b0c325372d2ce1d491c09a 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.7E-71 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VAB027_1721 e0c97b9c04b0c325372d2ce1d491c09a 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 2.1E-58 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VAB027_1721 e0c97b9c04b0c325372d2ce1d491c09a 201 PIRSF PIRSF015617 6 201 2.4E-66 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VAB027_1937 4dfb2eb7b6683f3bb5197e6e8b44f4a6 404 Gene3D G3DSA:1.20.1250.20 1 191 5.4E-17 T 14-10-2018 VAB027_1937 4dfb2eb7b6683f3bb5197e6e8b44f4a6 404 Gene3D G3DSA:1.20.1250.20 207 391 2.7E-19 T 14-10-2018 VAB027_1937 4dfb2eb7b6683f3bb5197e6e8b44f4a6 404 SUPERFAMILY SSF103473 5 389 1.96E-42 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1937 4dfb2eb7b6683f3bb5197e6e8b44f4a6 404 Pfam PF07690 Major Facilitator Superfamily 11 192 2.3E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_1937 4dfb2eb7b6683f3bb5197e6e8b44f4a6 404 Pfam PF07690 Major Facilitator Superfamily 217 384 1.7E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_1784 de71e4b9bb5cf1de8507d5d442ce5313 264 Gene3D G3DSA:3.40.50.300 1 255 1.6E-52 T 14-10-2018 VAB027_1784 de71e4b9bb5cf1de8507d5d442ce5313 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1784 de71e4b9bb5cf1de8507d5d442ce5313 264 SUPERFAMILY SSF52540 2 235 7.5E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1784 de71e4b9bb5cf1de8507d5d442ce5313 264 Pfam PF00005 ABC transporter 22 177 9.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1784 de71e4b9bb5cf1de8507d5d442ce5313 264 SMART SM00382 31 226 9.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_888 cde0e7b2d67d9e5456578cd6b7fa82ff 713 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 699 6.5E-231 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VAB027_888 cde0e7b2d67d9e5456578cd6b7fa82ff 713 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 616 4.2E-71 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 Pfam PF00672 HAMP domain 250 297 3.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 Gene3D G3DSA:1.10.287.950 247 578 1.4E-67 T 14-10-2018 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 543 4.8E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 SMART SM00283 315 576 1.6E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 SUPERFAMILY SSF58104 268 577 6.02E-73 T 14-10-2018 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 358 1.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2086 386faede8b24bb7fb6713dfc57955d69 578 SMART SM00304 246 300 1.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1620 a62d0d413c10d383f705d203b8b2eebb 263 Gene3D G3DSA:2.60.40.3880 151 263 2.4E-51 T 14-10-2018 VAB027_1620 a62d0d413c10d383f705d203b8b2eebb 263 Gene3D G3DSA:2.60.40.3880 23 150 2.4E-67 T 14-10-2018 VAB027_1818 f5997dd0ac6a5df79f38723b93db97fd 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.619 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VAB027_1818 f5997dd0ac6a5df79f38723b93db97fd 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 2.4E-77 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VAB027_1818 f5997dd0ac6a5df79f38723b93db97fd 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.2E-76 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VAB027_1818 f5997dd0ac6a5df79f38723b93db97fd 245 Gene3D G3DSA:3.20.20.70 1 245 1.1E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1818 f5997dd0ac6a5df79f38723b93db97fd 245 SUPERFAMILY SSF51366 1 242 5.58E-64 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_2259 e46084564b0df45c09820c77d5e40738 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 8.0E-142 T 14-10-2018 VAB027_2259 e46084564b0df45c09820c77d5e40738 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 6.4E-136 T 14-10-2018 IPR033752 MetA family VAB027_2259 e46084564b0df45c09820c77d5e40738 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.2E-171 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VAB027_2259 e46084564b0df45c09820c77d5e40738 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.333 T 14-10-2018 IPR033752 MetA family VAB027_2259 e46084564b0df45c09820c77d5e40738 313 PIRSF PIRSF000450 1 309 3.2E-150 T 14-10-2018 IPR033752 MetA family VAB027_2259 e46084564b0df45c09820c77d5e40738 313 Gene3D G3DSA:3.40.50.880 1 301 3.4E-126 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2259 e46084564b0df45c09820c77d5e40738 313 SUPERFAMILY SSF52317 17 297 1.7E-103 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 9.3E-159 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 SMART SM00836 461 577 6.2E-40 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 SUPERFAMILY SSF52374 111 454 2.71E-96 T 14-10-2018 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.3E-35 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Gene3D G3DSA:3.30.1360.70 1 106 2.5E-32 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 5.4E-195 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 SUPERFAMILY SSF55190 2 96 3.27E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Gene3D G3DSA:1.10.730.10 455 577 2.6E-34 T 14-10-2018 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.6E-19 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 27.889 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 SMART SM01016 5 87 7.0E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 Gene3D G3DSA:3.40.50.620 108 454 1.7E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2711 ae7c5533ce9a5a389ab00c9cca1ebbd4 577 SUPERFAMILY SSF47323 455 577 1.57E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3619 3fd85fb173f8342ad3511ba94d4b405c 527 SUPERFAMILY SSF53448 21 227 1.13E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3619 3fd85fb173f8342ad3511ba94d4b405c 527 SUPERFAMILY SSF56112 335 509 2.13E-8 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_2472 a92eef0c2b3bc41f6b11474675e13aaa 150 Pfam PF06610 L-alanine exporter 8 142 5.6E-68 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VAB027_2472 a92eef0c2b3bc41f6b11474675e13aaa 150 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.067 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VAB027_2472 a92eef0c2b3bc41f6b11474675e13aaa 150 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 5.0E-70 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 SUPERFAMILY SSF55821 18 215 7.02E-62 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 20 213 1.5E-57 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 Pfam PF01300 Telomere recombination 28 203 1.2E-56 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 Gene3D G3DSA:3.40.50.11030 219 329 3.4E-11 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 Gene3D G3DSA:3.90.870.10 10 218 4.0E-77 T 14-10-2018 VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 329 1.7E-17 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain VAB027_1761 d518dcc32a9d02e5463fe8ab390849dd 329 PIRSF PIRSF004930 7 329 1.1E-105 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 Pfam PF17200 Single Cache domain 2 49 193 4.9E-39 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 SUPERFAMILY SSF58104 250 559 4.84E-73 T 14-10-2018 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 354 4.3E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 4.3E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 Gene3D G3DSA:3.30.450.20 40 185 2.0E-52 T 14-10-2018 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 525 6.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 Pfam PF00672 HAMP domain 229 278 2.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 SMART SM00304 228 282 1.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 SMART SM00283 290 558 2.5E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 SMART SM01049 46 135 5.5E-34 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_3634 1eda77b509cfc645f6958ba332bdbcd0 559 Gene3D G3DSA:1.10.287.950 230 559 9.3E-71 T 14-10-2018 VAB027_2917 ee9a5413689872a531e22f4b14002cb2 154 SUPERFAMILY SSF53271 5 147 4.26E-30 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_2917 ee9a5413689872a531e22f4b14002cb2 154 Pfam PF00156 Phosphoribosyl transferase domain 27 142 1.2E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAB027_2917 ee9a5413689872a531e22f4b14002cb2 154 Gene3D G3DSA:3.40.50.2020 1 152 2.3E-43 T 14-10-2018 VAB027_2917 ee9a5413689872a531e22f4b14002cb2 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 40.038 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Pfam PF00675 Insulinase (Peptidase family M16) 49 168 1.3E-27 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 299 463 5.24E-14 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 8 251 3.4E-65 T 14-10-2018 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 500 716 3.14E-26 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 27 250 8.03E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Pfam PF05193 Peptidase M16 inactive domain 201 376 1.0E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Pfam PF05193 Peptidase M16 inactive domain 672 847 3.3E-14 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 731 918 4.1E-16 T 14-10-2018 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 510 719 8.0E-20 T 14-10-2018 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 Gene3D G3DSA:3.30.830.10 257 470 8.5E-12 T 14-10-2018 VAB027_2354 ff97fb5d12df5989785dedb17eac12be 922 SUPERFAMILY SSF63411 748 908 3.84E-17 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 Gene3D G3DSA:3.30.540.10 1 140 2.5E-51 T 14-10-2018 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 Gene3D G3DSA:3.40.190.80 144 266 1.3E-37 T 14-10-2018 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-32 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-32 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-32 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-32 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 SUPERFAMILY SSF56655 1 259 2.49E-84 T 14-10-2018 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.1E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.1E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.1E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.1E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.1E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.1E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_1401 5ba775791c4a040a9678628dc60047a4 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.6E-70 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_3663 294164c483e0504f311a1eeed0c04aec 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 86.311 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria VAB027_3663 294164c483e0504f311a1eeed0c04aec 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 3.5E-68 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria VAB027_3663 294164c483e0504f311a1eeed0c04aec 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.6E-34 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 VAB027_110 a9d693787080363a217f6fc015de38c0 311 Gene3D G3DSA:1.10.150.130 14 108 4.0E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_110 a9d693787080363a217f6fc015de38c0 311 SUPERFAMILY SSF47823 16 107 1.06E-10 T 14-10-2018 VAB027_110 a9d693787080363a217f6fc015de38c0 311 SUPERFAMILY SSF56349 117 302 1.59E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_110 a9d693787080363a217f6fc015de38c0 311 Pfam PF00589 Phage integrase family 122 290 1.1E-48 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_110 a9d693787080363a217f6fc015de38c0 311 Gene3D G3DSA:1.10.443.10 121 298 1.6E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_110 a9d693787080363a217f6fc015de38c0 311 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 9.5E-108 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VAB027_110 a9d693787080363a217f6fc015de38c0 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 1.0E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAB027_110 a9d693787080363a217f6fc015de38c0 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.942 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VAB027_1286 76ccbe69aefad1bfb795b52145b3e6f0 101 Gene3D G3DSA:4.10.830.10 41 101 4.6E-22 T 14-10-2018 VAB027_1286 76ccbe69aefad1bfb795b52145b3e6f0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.729 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VAB027_1286 76ccbe69aefad1bfb795b52145b3e6f0 101 SUPERFAMILY SSF57716 2 101 1.71E-36 T 14-10-2018 VAB027_1286 76ccbe69aefad1bfb795b52145b3e6f0 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.1E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1286 76ccbe69aefad1bfb795b52145b3e6f0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF04563 RNA polymerase beta subunit 26 500 6.4E-58 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 5.9E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:2.40.270.10 1034 1241 7.4E-89 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:3.90.1110.10 157 269 3.2E-27 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:3.90.1110.10 302 441 1.3E-35 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:2.40.270.10 790 832 1.7E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.302 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:3.90.1100.10 19 156 1.4E-48 T 14-10-2018 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:2.40.50.150 833 954 3.6E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:3.90.1100.10 647 713 2.8E-21 T 14-10-2018 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:3.90.1100.10 442 621 2.1E-65 T 14-10-2018 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 2.6E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:2.40.50.100 714 788 3.9E-32 T 14-10-2018 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Gene3D G3DSA:3.90.1800.10 1251 1305 8.3E-11 T 14-10-2018 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.8E-24 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 1.3E-17 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 235 1.1E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_3514 65ee5f66177095bf7259e583aeae7bd6 1341 SUPERFAMILY SSF64484 11 1340 0.0 T 14-10-2018 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 Pfam PF01926 50S ribosome-binding GTPase 33 147 1.6E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 SUPERFAMILY SSF52540 33 228 5.95E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3086 c80e58733d297db8e8f206cafff70620 324 Pfam PF07650 KH domain 231 308 9.7E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 Hamap MF_00367 GTPase Era [era]. 28 320 35.579 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 Gene3D G3DSA:3.30.300.20 208 322 9.4E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_3086 c80e58733d297db8e8f206cafff70620 324 TIGRFAM TIGR00436 era: GTP-binding protein Era 31 303 2.1E-110 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 SUPERFAMILY SSF54814 204 320 1.47E-40 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 190 2.6E-37 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3086 c80e58733d297db8e8f206cafff70620 324 Gene3D G3DSA:3.40.50.300 25 206 5.3E-51 T 14-10-2018 VAB027_1749 715972071ec6516a5936b96f539374de 100 Gene3D G3DSA:1.10.10.10 1 100 7.4E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1749 715972071ec6516a5936b96f539374de 100 SUPERFAMILY SSF46767 2 84 4.32E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VAB027_1749 715972071ec6516a5936b96f539374de 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.5E-23 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Gene3D G3DSA:3.90.1150.10 562 949 4.7E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 SUPERFAMILY SSF53383 42 464 3.09E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 780 801 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Gene3D G3DSA:3.90.1150.10 39 462 2.9E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Gene3D G3DSA:1.20.1650.10 463 561 3.4E-45 T 14-10-2018 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Gene3D G3DSA:3.40.640.10 576 844 4.7E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Gene3D G3DSA:3.40.640.10 87 355 2.9E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 893 3.6E-65 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 SUPERFAMILY SSF53383 516 959 4.79E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 Pfam PF00202 Aminotransferase class-III 51 464 2.5E-92 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_2273 3ca9e533d8fdb197e45690346cace3a1 961 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 7.0E-157 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 Pfam PF02817 e3 binding domain 113 146 1.0E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 Pfam PF00364 Biotin-requiring enzyme 4 76 4.2E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 402 2.7E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 Gene3D G3DSA:3.30.559.10 172 404 9.5E-99 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 Gene3D G3DSA:4.10.320.10 102 151 2.9E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 404 5.2E-185 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 SUPERFAMILY SSF52777 174 403 4.31E-91 T 14-10-2018 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 Gene3D G3DSA:2.40.50.100 1 79 2.4E-23 T 14-10-2018 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 SUPERFAMILY SSF47005 107 149 1.23E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAB027_2722 a8787c7923956f3370c4ae7b59350103 404 SUPERFAMILY SSF51230 1 94 2.36E-25 T 14-10-2018 IPR011053 Single hybrid motif VAB027_2251 fd7a82978b43e8e649a2d7fff64579a1 228 Pfam PF00072 Response regulator receiver domain 6 116 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2251 fd7a82978b43e8e649a2d7fff64579a1 228 Pfam PF12431 Transcriptional regulator 133 159 8.8E-9 T 14-10-2018 IPR028141 Transcriptional regulator VAB027_2251 fd7a82978b43e8e649a2d7fff64579a1 228 SMART SM00448 3 116 1.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2251 fd7a82978b43e8e649a2d7fff64579a1 228 Gene3D G3DSA:3.40.50.12740 3 208 7.2E-29 T 14-10-2018 VAB027_2251 fd7a82978b43e8e649a2d7fff64579a1 228 SUPERFAMILY SSF52172 3 184 1.57E-33 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2251 fd7a82978b43e8e649a2d7fff64579a1 228 PIRSF PIRSF006171 1 226 2.3E-83 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VAB027_1320 97bf4fab513c4b32fa30c654e19da1fd 571 Gene3D G3DSA:3.10.20.310 185 261 9.1E-19 T 14-10-2018 VAB027_1320 97bf4fab513c4b32fa30c654e19da1fd 571 Gene3D G3DSA:2.40.160.50 262 571 4.4E-96 T 14-10-2018 VAB027_1320 97bf4fab513c4b32fa30c654e19da1fd 571 Pfam PF01103 Surface antigen 275 568 4.9E-29 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VAB027_1320 97bf4fab513c4b32fa30c654e19da1fd 571 Gene3D G3DSA:3.10.20.310 98 184 5.9E-25 T 14-10-2018 VAB027_1320 97bf4fab513c4b32fa30c654e19da1fd 571 Pfam PF17243 POTRA domain TamA domain 1 24 94 6.1E-20 T 14-10-2018 IPR035243 TamA, POTRA domain 1 VAB027_1320 97bf4fab513c4b32fa30c654e19da1fd 571 Gene3D G3DSA:3.10.20.310 20 96 3.4E-23 T 14-10-2018 VAB027_3637 bae97d43a3c18d671ec20e00cabe38a3 315 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 314 44.378 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VAB027_3637 bae97d43a3c18d671ec20e00cabe38a3 315 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 302 2.5E-72 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAB027_3637 bae97d43a3c18d671ec20e00cabe38a3 315 PIRSF PIRSF026649 6 311 2.6E-81 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAB027_3637 bae97d43a3c18d671ec20e00cabe38a3 315 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 308 8.3E-127 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SUPERFAMILY SSF56037 196 394 3.66E-78 T 14-10-2018 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SMART SM00874 403 471 1.3E-30 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SUPERFAMILY SSF55681 467 689 1.84E-54 T 14-10-2018 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SUPERFAMILY SSF54991 697 794 2.35E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.8E-280 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SMART SM00896 701 794 1.3E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Gene3D G3DSA:3.30.56.10 403 475 5.8E-27 T 14-10-2018 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Pfam PF01588 Putative tRNA binding domain 45 145 7.8E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Gene3D G3DSA:3.30.56.10 7 179 1.4E-69 T 14-10-2018 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SUPERFAMILY SSF50249 40 192 4.41E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Gene3D G3DSA:2.40.50.140 39 154 1.4E-69 T 14-10-2018 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.851 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Gene3D G3DSA:3.30.70.380 702 795 1.7E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 5.3E-29 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Gene3D G3DSA:3.50.40.10 197 394 2.3E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Gene3D G3DSA:3.30.930.10 485 691 2.6E-64 T 14-10-2018 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Pfam PF03483 B3/4 domain 212 385 1.1E-72 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SUPERFAMILY SSF46955 404 475 5.68E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.5E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VAB027_1903 c3ca6d34bd9afd459ac61a13a70e47da 795 SMART SM00873 212 385 1.7E-100 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Gene3D G3DSA:3.30.499.10 402 529 8.7E-150 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 SUPERFAMILY SSF74778 2 160 3.4E-68 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 8.4E-98 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Gene3D G3DSA:1.25.40.310 1 161 4.6E-73 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 PIRSF PIRSF036687 1 859 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.8E-66 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Gene3D G3DSA:3.30.499.10 683 865 1.2E-70 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Gene3D G3DSA:3.20.19.10 162 361 6.5E-81 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Gene3D G3DSA:3.40.1060.10 385 681 8.7E-150 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 SUPERFAMILY SSF52016 162 372 2.55E-69 T 14-10-2018 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAB027_3244 e9984210ec548ee445835d3dfa018eb6 865 SUPERFAMILY SSF53732 379 860 2.09E-147 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VAB027_3241 08a8bf3b050dc7695414159168357b29 409 Gene3D G3DSA:1.10.3430.10 2 408 1.3E-119 T 14-10-2018 IPR029020 Ammonium/urea transporter VAB027_3241 08a8bf3b050dc7695414159168357b29 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 4.6E-205 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype VAB027_3241 08a8bf3b050dc7695414159168357b29 409 SUPERFAMILY SSF111352 12 383 2.75E-105 T 14-10-2018 VAB027_3241 08a8bf3b050dc7695414159168357b29 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VAB027_3241 08a8bf3b050dc7695414159168357b29 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.5E-100 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 Gene3D G3DSA:2.170.130.10 32 161 3.7E-41 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 156 1.1E-28 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 SUPERFAMILY SSF56935 33 652 3.46E-128 T 14-10-2018 VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 Pfam PF00593 TonB dependent receptor 200 650 1.3E-60 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 Gene3D G3DSA:2.40.170.20 167 652 9.8E-139 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_3348 254560a2c46209ca9f5d6144cc667a00 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 14-10-2018 IPR010916 TonB box, conserved site VAB027_3482 f259d0d9c7f4debe36f449a2905fa908 326 PIRSF PIRSF005651 1 326 1.6E-93 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VAB027_3482 f259d0d9c7f4debe36f449a2905fa908 326 SMART SM00244 18 218 3.8E-47 T 14-10-2018 IPR001107 Band 7 domain VAB027_3482 f259d0d9c7f4debe36f449a2905fa908 326 SUPERFAMILY SSF117892 56 223 3.53E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VAB027_3482 f259d0d9c7f4debe36f449a2905fa908 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 2.1E-142 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VAB027_3482 f259d0d9c7f4debe36f449a2905fa908 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 5.5E-29 T 14-10-2018 IPR001107 Band 7 domain VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.1E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VAB027_1291 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 SMART SM00382 35 235 1.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 SMART SM00382 312 504 3.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 Pfam PF00005 ABC transporter 304 455 7.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 Pfam PF00005 ABC transporter 26 185 1.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 Gene3D G3DSA:3.40.50.300 281 536 7.3E-69 T 14-10-2018 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 SUPERFAMILY SSF52540 295 526 1.36E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 Gene3D G3DSA:3.40.50.300 4 280 1.2E-84 T 14-10-2018 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 533 3.0E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 6.5E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 SUPERFAMILY SSF52540 6 256 6.37E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1150 64643e946d9bc59adc21bf7fa96d8b5e 539 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.874 T 14-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 Pfam PF03471 Transporter associated domain 497 570 8.6E-6 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.0E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 Gene3D G3DSA:3.30.70.1450 412 487 1.4E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 SUPERFAMILY SSF116726 414 484 5.1E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 SUPERFAMILY SSF56176 500 570 6.82E-7 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 Pfam PF02080 TrkA-C domain 417 484 1.3E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 SMART SM01091 493 572 2.7E-8 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_191 90bad85118ea009c4a45690b1cdaa963 581 Gene3D G3DSA:1.20.1530.20 7 392 2.1E-21 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 SMART SM00363 358 424 3.6E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 Gene3D G3DSA:3.10.290.10 331 425 1.5E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 SUPERFAMILY SSF52374 5 328 1.24E-97 T 14-10-2018 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 421 43.54 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 421 3.0E-122 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 Gene3D G3DSA:1.10.240.10 228 330 1.4E-34 T 14-10-2018 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 Gene3D G3DSA:3.40.50.620 1 227 7.2E-88 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 Pfam PF00579 tRNA synthetases class I (W and Y) 34 328 2.8E-81 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 5.3E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 5.3E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 5.3E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 5.3E-31 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 SUPERFAMILY SSF55174 326 420 3.93E-15 T 14-10-2018 VAB027_3358 aaee00c56fe8f5eb8712618872af8e17 426 Pfam PF01479 S4 domain 360 392 2.6E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.3E-7 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.3E-7 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.3E-7 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-7 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.5E-83 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Gene3D G3DSA:3.40.50.620 202 397 1.9E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 SUPERFAMILY SSF52402 189 412 6.17E-58 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Gene3D G3DSA:3.30.300.10 398 517 3.3E-51 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Pfam PF02540 NAD synthase 212 285 1.7E-7 T 14-10-2018 IPR022310 NAD/GMP synthase VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.8E-6 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.8E-6 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.8E-6 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 SUPERFAMILY SSF54810 397 517 3.92E-51 T 14-10-2018 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.362 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Gene3D G3DSA:3.40.50.880 6 201 1.1E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 SUPERFAMILY SSF52317 9 200 4.13E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 2.2E-41 T 14-10-2018 IPR017926 Glutamine amidotransferase VAB027_1424 8f243af58a8f1a4fe9e59c59a1a5bb40 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.9E-156 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VAB027_2330 f389a99be8e4992ef09d15c65bcb35d1 295 Gene3D G3DSA:1.10.3720.10 84 291 2.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2330 f389a99be8e4992ef09d15c65bcb35d1 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 2.8E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2330 f389a99be8e4992ef09d15c65bcb35d1 295 SUPERFAMILY SSF161098 89 276 7.19E-24 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2330 f389a99be8e4992ef09d15c65bcb35d1 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.0E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 SUPERFAMILY SSF58104 358 640 1.37E-41 T 14-10-2018 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 Gene3D G3DSA:1.10.287.950 33 342 1.9E-44 T 14-10-2018 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 Gene3D G3DSA:1.10.287.950 343 641 1.0E-40 T 14-10-2018 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 147 286 1.5E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 443 602 1.1E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 SMART SM00283 71 346 1.3E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 SMART SM00283 357 632 1.6E-13 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2078 ae228b3e08f1a1953f5973779150c892 641 SUPERFAMILY SSF58104 56 342 3.01E-45 T 14-10-2018 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 Pfam PF00905 Penicillin binding protein transpeptidase domain 434 706 4.2E-27 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 759 2.7E-169 T 14-10-2018 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 Gene3D G3DSA:1.10.3810.10 48 242 4.5E-78 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 Gene3D G3DSA:3.40.710.10 243 365 2.2E-9 T 14-10-2018 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 Pfam PF17092 Penicillin-binding protein OB-like domain 317 431 2.1E-30 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 SUPERFAMILY SSF56601 211 811 2.0E-115 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 Pfam PF00912 Transglycosylase 55 229 2.7E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_255 018ac5b7366b1e4fa9134061e5ff990e 825 SUPERFAMILY SSF53955 43 256 7.87E-78 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 Gene3D G3DSA:2.40.420.20 273 344 2.4E-72 T 14-10-2018 VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 Gene3D G3DSA:2.40.50.100 61 189 2.4E-72 T 14-10-2018 VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 346 1.7E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 SUPERFAMILY SSF111369 51 266 1.12E-38 T 14-10-2018 VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 Gene3D G3DSA:2.40.30.170 51 272 2.4E-72 T 14-10-2018 VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 Gene3D G3DSA:1.10.287.470 96 155 2.4E-72 T 14-10-2018 VAB027_3696 4f38c8ee5643d90febdcb92b14c09a25 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 262 1.4E-26 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_1416 702f82114389a59c6430ba91187b8c07 412 Pfam PF03129 Anticodon binding domain 326 408 7.3E-12 T 14-10-2018 IPR004154 Anticodon-binding VAB027_1416 702f82114389a59c6430ba91187b8c07 412 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 1 400 3.2E-157 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VAB027_1416 702f82114389a59c6430ba91187b8c07 412 Pfam PF13393 Histidyl-tRNA synthetase 1 302 4.5E-45 T 14-10-2018 VAB027_1416 702f82114389a59c6430ba91187b8c07 412 SUPERFAMILY SSF55681 1 311 2.99E-103 T 14-10-2018 VAB027_1416 702f82114389a59c6430ba91187b8c07 412 PIRSF PIRSF001549 1 411 3.1E-122 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VAB027_1416 702f82114389a59c6430ba91187b8c07 412 SUPERFAMILY SSF52954 317 409 6.54E-26 T 14-10-2018 VAB027_1416 702f82114389a59c6430ba91187b8c07 412 Gene3D G3DSA:3.40.50.800 316 411 7.0E-26 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VAB027_1416 702f82114389a59c6430ba91187b8c07 412 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 410 31.872 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VAB027_1416 702f82114389a59c6430ba91187b8c07 412 Gene3D G3DSA:3.30.930.10 1 312 2.4E-116 T 14-10-2018 VAB027_2590 286901d4664152bc27b533566b846e7e 815 Gene3D G3DSA:2.40.40.20 652 809 7.7E-46 T 14-10-2018 VAB027_2590 286901d4664152bc27b533566b846e7e 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 1.5E-100 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2590 286901d4664152bc27b533566b846e7e 815 Gene3D G3DSA:3.40.50.740 86 566 7.1E-218 T 14-10-2018 VAB027_2590 286901d4664152bc27b533566b846e7e 815 SUPERFAMILY SSF53706 47 665 1.44E-161 T 14-10-2018 VAB027_2590 286901d4664152bc27b533566b846e7e 815 Gene3D G3DSA:3.40.228.10 178 643 7.1E-218 T 14-10-2018 VAB027_2590 286901d4664152bc27b533566b846e7e 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 5.3E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAB027_2590 286901d4664152bc27b533566b846e7e 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 14-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 VAB027_2590 286901d4664152bc27b533566b846e7e 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VAB027_2590 286901d4664152bc27b533566b846e7e 815 SUPERFAMILY SSF50692 670 813 1.29E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAB027_2590 286901d4664152bc27b533566b846e7e 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 2.3E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAB027_2590 286901d4664152bc27b533566b846e7e 815 Gene3D G3DSA:3.90.55.10 81 617 7.1E-218 T 14-10-2018 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 Pfam PF06733 DEAD_2 196 262 2.6E-5 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.683 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 Gene3D G3DSA:3.40.50.300 500 690 3.3E-33 T 14-10-2018 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 SMART SM00491 535 671 4.3E-29 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 Pfam PF13307 Helicase C-terminal domain 526 684 5.6E-37 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 Gene3D G3DSA:3.40.50.300 27 305 4.0E-38 T 14-10-2018 VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 SUPERFAMILY SSF52540 203 665 9.48E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2498 d1d63b71ab9d95663a599cf1635e90bb 691 SUPERFAMILY SSF52540 16 666 8.46E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.488 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VAB027_2889 faaeed292eb66eae59604a2001672df5 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Gene3D G3DSA:2.160.10.10 1 196 7.5E-54 T 14-10-2018 VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.1E-31 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.3E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 32 1.3E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 177 0.0013 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2889 faaeed292eb66eae59604a2001672df5 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.8E-110 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VAB027_2889 faaeed292eb66eae59604a2001672df5 262 SUPERFAMILY SSF51161 1 262 5.38E-83 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_2889 faaeed292eb66eae59604a2001672df5 262 PIRSF PIRSF000456 4 262 1.3E-108 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VAB027_2889 faaeed292eb66eae59604a2001672df5 262 Gene3D G3DSA:1.20.1180.10 197 262 1.2E-27 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 Gene3D G3DSA:3.40.50.300 475 721 3.6E-88 T 14-10-2018 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 SUPERFAMILY SSF90123 155 466 2.35E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 Gene3D G3DSA:1.20.1560.10 154 468 6.6E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 Pfam PF03412 Peptidase C39 family 27 117 1.5E-5 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 27 720 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 Gene3D G3DSA:3.90.70.10 26 150 7.9E-10 T 14-10-2018 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 SUPERFAMILY SSF52540 473 718 1.44E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 Pfam PF00664 ABC transporter transmembrane region 171 437 7.4E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 SMART SM00382 508 694 1.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2119 1f795b14d779603ed2fc73ff7740ed60 721 Pfam PF00005 ABC transporter 499 648 3.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2266 76406901419255d52f8600bd31251047 405 Gene3D G3DSA:1.20.1250.20 6 387 2.3E-44 T 14-10-2018 VAB027_2266 76406901419255d52f8600bd31251047 405 Pfam PF07690 Major Facilitator Superfamily 16 352 1.0E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_2266 76406901419255d52f8600bd31251047 405 SUPERFAMILY SSF103473 6 393 1.18E-54 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 SUPERFAMILY SSF52540 156 282 3.85E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Pfam PF05127 Helicase 178 344 1.2E-56 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Gene3D G3DSA:3.40.630.30 338 540 2.4E-66 T 14-10-2018 VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Pfam PF08351 Domain of unknown function (DUF1726) 65 112 1.1E-4 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Gene3D G3DSA:3.40.50.11040 3 154 1.5E-17 T 14-10-2018 VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 669 46.399 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 SUPERFAMILY SSF55729 373 540 8.54E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Pfam PF13718 GNAT acetyltransferase 2 379 492 5.4E-19 T 14-10-2018 IPR000182 GNAT domain VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Pfam PF13718 GNAT acetyltransferase 2 494 540 4.1E-7 T 14-10-2018 IPR000182 GNAT domain VAB027_1022 2977d87653fbdebb89b0c364a8de1b4f 677 Gene3D G3DSA:3.40.50.12320 176 334 1.9E-47 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 306 1.9E-104 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 SMART SM00047 149 310 4.0E-76 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 159 182 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 246 267 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 224 245 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 289 307 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 PRINTS PR01002 Flagellar protein FlgJ signature 183 201 1.5E-29 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 Pfam PF10135 Rod binding protein 53 102 1.2E-14 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 Gene3D G3DSA:2.10.70.40 198 249 3.1E-45 T 14-10-2018 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 170 306 1.1E-19 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VAB027_2834 7969974e01b8ec87d2cd3ff7558352e5 312 Gene3D G3DSA:1.10.530.10 164 302 3.1E-45 T 14-10-2018 VAB027_735 f4d96974a5dd568e6d261a5de668faab 211 Gene3D G3DSA:3.40.50.1000 8 196 3.3E-43 T 14-10-2018 IPR023214 HAD superfamily VAB027_735 f4d96974a5dd568e6d261a5de668faab 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 1.6E-33 T 14-10-2018 VAB027_735 f4d96974a5dd568e6d261a5de668faab 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 185 2.4E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_735 f4d96974a5dd568e6d261a5de668faab 211 Gene3D G3DSA:1.10.150.240 17 86 3.3E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_735 f4d96974a5dd568e6d261a5de668faab 211 SUPERFAMILY SSF56784 4 198 1.97E-43 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 Gene3D G3DSA:3.40.50.12780 50 515 5.5E-105 T 14-10-2018 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.0E-21 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 SUPERFAMILY SSF56801 7 644 1.3E-183 T 14-10-2018 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.655 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 Pfam PF00501 AMP-binding enzyme 84 522 1.0E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 Gene3D G3DSA:3.30.300.30 518 649 1.6E-30 T 14-10-2018 VAB027_3548 a0982fe10561296eac6d2df48ef38f07 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 5.0E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 SUPERFAMILY SSF53613 6 294 5.14E-71 T 14-10-2018 IPR029056 Ribokinase-like VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 Pfam PF00294 pfkB family carbohydrate kinase 15 293 6.8E-53 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 1.2E-102 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 PIRSF PIRSF000535 2 311 9.5E-97 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 Gene3D G3DSA:3.40.1190.20 2 311 8.5E-95 T 14-10-2018 IPR029056 Ribokinase-like VAB027_642 9526b5b852f035e615dcbbc8c846ba7a 317 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 309 1.9E-104 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 SUPERFAMILY SSF55120 9 247 1.04E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.1E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.2E-57 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 SUPERFAMILY SSF88697 250 309 1.24E-14 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.967 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 Gene3D G3DSA:2.30.130.10 249 311 2.9E-21 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 6.1E-86 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 Gene3D G3DSA:3.30.2350.10 1 248 2.9E-94 T 14-10-2018 VAB027_3201 0cef2227d034b080726eb50c7a8303c8 312 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.6E-19 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1341 2ce516dd5d53150393b3c0b743532923 185 SUPERFAMILY SSF56784 21 178 3.47E-40 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_1341 2ce516dd5d53150393b3c0b743532923 185 Gene3D G3DSA:3.40.50.1000 1 177 8.6E-60 T 14-10-2018 IPR023214 HAD superfamily VAB027_1341 2ce516dd5d53150393b3c0b743532923 185 PIRSF PIRSF006118 10 185 2.1E-74 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_1341 2ce516dd5d53150393b3c0b743532923 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 2.2E-8 T 14-10-2018 VAB027_1341 2ce516dd5d53150393b3c0b743532923 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.5E-62 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_2793 83a8211ef49fdbdbadc4f2f7c97af1a2 116 Gene3D G3DSA:3.40.30.10 1 116 2.1E-50 T 14-10-2018 VAB027_2793 83a8211ef49fdbdbadc4f2f7c97af1a2 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 3.3E-45 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VAB027_2793 83a8211ef49fdbdbadc4f2f7c97af1a2 116 Pfam PF03960 ArsC family 6 115 1.7E-21 T 14-10-2018 IPR006660 Arsenate reductase-like VAB027_2793 83a8211ef49fdbdbadc4f2f7c97af1a2 116 SUPERFAMILY SSF52833 2 116 8.68E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 431 1.1E-41 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 7.8E-41 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 SUPERFAMILY SSF51206 8 128 1.14E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 SMART SM00116 155 212 11.0 T 14-10-2018 IPR000644 CBS domain VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 SMART SM00116 229 276 1.8 T 14-10-2018 IPR000644 CBS domain VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 7.8E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 Gene3D G3DSA:2.60.120.10 5 136 6.0E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 Pfam PF00571 CBS domain 222 275 0.0017 T 14-10-2018 IPR000644 CBS domain VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 Gene3D G3DSA:3.10.580.10 137 288 1.0E-18 T 14-10-2018 VAB027_3546 c4e4e68b4a4368ecc0f7bbd59dc78626 607 SUPERFAMILY SSF54631 144 275 5.42E-17 T 14-10-2018 VAB027_3392 0619d7bf89f94ccda01bf5f42b6fefa9 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 6.2E-37 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE VAB027_2891 7a025fafea064e16424aeed01160db1a 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 2.8E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VAB027_2891 7a025fafea064e16424aeed01160db1a 351 SUPERFAMILY SSF51161 32 316 1.53E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Gene3D G3DSA:2.160.10.10 100 308 9.1E-66 T 14-10-2018 VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.504 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 113 144 2.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.057 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 179 7.1E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 3.1E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_2891 7a025fafea064e16424aeed01160db1a 351 Gene3D G3DSA:3.40.1390.10 1 99 9.5E-29 T 14-10-2018 VAB027_2891 7a025fafea064e16424aeed01160db1a 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.1E-120 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VAB027_2891 7a025fafea064e16424aeed01160db1a 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 2.1E-51 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Gene3D G3DSA:3.40.50.300 180 344 1.9E-51 T 14-10-2018 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Gene3D G3DSA:3.40.50.300 2 179 8.9E-53 T 14-10-2018 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 SMART SM00490 226 327 7.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Pfam PF04408 Helicase associated domain (HA2) 387 470 9.1E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Pfam PF00270 DEAD/DEAH box helicase 10 165 1.1E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 SMART SM00487 2 186 3.0E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Pfam PF00271 Helicase conserved C-terminal domain 206 326 3.6E-13 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 Gene3D G3DSA:1.20.120.1080 372 474 8.9E-7 T 14-10-2018 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 PIRSF PIRSF005496 1 819 0.0 T 14-10-2018 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 SUPERFAMILY SSF52540 22 479 6.0E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 SMART SM00847 386 476 4.3E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAB027_3247 f53ec14228501e2e78414d3ddd587ae4 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 SMART SM00798 137 462 1.2E-214 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 SUPERFAMILY SSF53927 222 530 2.21E-129 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 PIRSF PIRSF000414 1 530 6.8E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 530 3.3E-259 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 Pfam PF02142 MGS-like domain 19 132 3.2E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 SUPERFAMILY SSF52335 7 196 1.11E-71 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 Gene3D G3DSA:3.40.50.1380 1 200 5.5E-87 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 SMART SM00851 19 132 4.8E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 Gene3D G3DSA:3.40.140.20 220 373 1.2E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.36 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 Gene3D G3DSA:3.40.140.20 394 530 4.8E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_3569 7ff969a5359a31c9cfd7997a826ed9b0 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 1.5E-117 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_1857 5d97200789050063746d3c17eea29f92 206 SUPERFAMILY SSF55821 1 203 1.13E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAB027_1857 5d97200789050063746d3c17eea29f92 206 Pfam PF01300 Telomere recombination 23 198 2.3E-45 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VAB027_1857 5d97200789050063746d3c17eea29f92 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.4E-71 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VAB027_1857 5d97200789050063746d3c17eea29f92 206 Gene3D G3DSA:3.90.870.10 1 206 6.0E-69 T 14-10-2018 VAB027_1133 76feec5ad734e2b1fab9b16766371f6a 367 SUPERFAMILY SSF51395 1 363 8.33E-126 T 14-10-2018 VAB027_1133 76feec5ad734e2b1fab9b16766371f6a 367 Gene3D G3DSA:3.20.20.70 1 366 6.8E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1133 76feec5ad734e2b1fab9b16766371f6a 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 1.1E-97 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VAB027_1071 f9c1a741b59f02501ec138cff9590220 201 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 199 1.4E-85 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VAB027_1071 f9c1a741b59f02501ec138cff9590220 201 Gene3D G3DSA:3.40.1280.10 1 201 7.1E-68 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_1071 f9c1a741b59f02501ec138cff9590220 201 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 26.466 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VAB027_1071 f9c1a741b59f02501ec138cff9590220 201 SUPERFAMILY SSF75217 1 201 1.57E-66 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 Gene3D G3DSA:3.40.228.10 179 641 9.8E-241 T 14-10-2018 VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 Pfam PF00384 Molybdopterin oxidoreductase 87 560 4.3E-79 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 3.0E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 Gene3D G3DSA:3.90.55.10 81 615 9.8E-241 T 14-10-2018 VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 Gene3D G3DSA:3.40.50.740 87 569 9.8E-241 T 14-10-2018 VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VAB027_2338 386d588c8a17f96beccc2439d95cf3a9 741 SUPERFAMILY SSF53706 42 660 1.83E-167 T 14-10-2018 VAB027_3322 1762fd02666a474349f857f1e4eb3d22 94 Gene3D G3DSA:1.20.5.400 22 63 1.0E-8 T 14-10-2018 VAB027_3322 1762fd02666a474349f857f1e4eb3d22 94 Pfam PF04977 Septum formation initiator 11 89 2.3E-27 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VAB027_3322 1762fd02666a474349f857f1e4eb3d22 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.636 T 14-10-2018 IPR023081 Cell division protein FtsB VAB027_2838 2a2ffc0952b428f84988c9de43399d55 249 SUPERFAMILY SSF117143 77 207 2.75E-17 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VAB027_2838 2a2ffc0952b428f84988c9de43399d55 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.0E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAB027_2838 2a2ffc0952b428f84988c9de43399d55 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.1E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAB027_2838 2a2ffc0952b428f84988c9de43399d55 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 9.2E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VAB027_2838 2a2ffc0952b428f84988c9de43399d55 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.7E-34 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.3E-50 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 SUPERFAMILY SSF56420 2 164 3.53E-57 T 14-10-2018 IPR036821 Peptide deformylase superfamily VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 PIRSF PIRSF004749 1 168 9.5E-53 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.054 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.4E-31 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.4E-31 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-31 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.4E-31 T 14-10-2018 IPR023635 Peptide deformylase VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 Gene3D G3DSA:3.90.45.10 1 168 1.8E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily VAB027_885 b25fc0a7463892dc4832c001e5739cd5 168 Pfam PF01327 Polypeptide deformylase 4 152 1.3E-47 T 14-10-2018 IPR023635 Peptide deformylase VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 651 25.997 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 1.5E-12 T 14-10-2018 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Gene3D G3DSA:3.30.230.10 217 329 4.2E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 SMART SM01340 212 330 3.3E-57 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 SMART SM00853 473 612 1.4E-18 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 SUPERFAMILY SSF54211 191 329 3.79E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.5E-103 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Pfam PF08676 MutL C terminal dimerisation domain 470 610 3.7E-31 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Gene3D G3DSA:3.30.565.10 1 216 4.1E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Gene3D G3DSA:3.30.1370.100 514 606 1.6E-54 T 14-10-2018 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Gene3D G3DSA:2.30.42.20 470 650 1.6E-54 T 14-10-2018 VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 SUPERFAMILY SSF55874 1 208 1.44E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 SUPERFAMILY SSF118116 470 649 5.1E-39 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily VAB027_3487 e4c7395d0d847915b0e77c9a97d026ec 653 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.7E-39 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:2.40.30.10 294 413 3.4E-43 T 14-10-2018 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 6.8E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF54980 401 478 1.8E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF54980 600 689 2.48E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.30.70.870 430 480 2.0E-20 T 14-10-2018 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SMART SM00838 597 684 2.6E-47 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.40.50.300 2 289 4.6E-102 T 14-10-2018 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF50447 261 399 9.06E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF03764 Elongation factor G, domain IV 476 594 6.5E-44 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF14492 Elongation Factor G, domain II 401 474 8.5E-29 T 14-10-2018 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SMART SM00889 477 595 2.6E-60 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 8.1E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 174 5.6E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 103.488 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.30.230.10 481 684 2.6E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF52540 4 278 3.23E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.30.70.240 601 671 2.6E-84 T 14-10-2018 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.5E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 1.2E-296 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2973 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF54211 476 596 8.34E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 SUPERFAMILY SSF64383 153 285 3.27E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 154 280 1.2E-46 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 154 285 2.0E-74 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 Gene3D G3DSA:3.30.1400.10 149 289 8.6E-50 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 281 5.8E-121 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 283 22.766 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VAB027_1658 e23b6b6026c8eb40816c672a50abc6a3 291 SMART SM00771 151 281 7.1E-76 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VAB027_3412 7e1b2912ece45506f0bd4cac74fca871 187 Gene3D G3DSA:3.90.950.10 4 187 2.4E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_3412 7e1b2912ece45506f0bd4cac74fca871 187 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 184 5.0E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_3412 7e1b2912ece45506f0bd4cac74fca871 187 SUPERFAMILY SSF52972 3 186 2.62E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_3412 7e1b2912ece45506f0bd4cac74fca871 187 PIRSF PIRSF006305 1 187 4.9E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_3412 7e1b2912ece45506f0bd4cac74fca871 187 Hamap MF_00528 Septum formation protein Maf [maf]. 5 187 30.414 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_3412 7e1b2912ece45506f0bd4cac74fca871 187 Pfam PF02545 Maf-like protein 5 186 3.5E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF57938 136 212 2.22E-22 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.4E-139 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.10.230.10 141 211 1.8E-24 T 14-10-2018 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF46565 1 110 1.7E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 116 262 9.68E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF00684 DnaJ central domain 149 209 7.4E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 7 25 6.6E-32 T 14-10-2018 IPR001623 DnaJ domain VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 25 40 6.6E-32 T 14-10-2018 IPR001623 DnaJ domain VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 42 62 6.6E-32 T 14-10-2018 IPR001623 DnaJ domain VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 62 81 6.6E-32 T 14-10-2018 IPR001623 DnaJ domain VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.4E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 SMART SM00271 4 62 8.0E-31 T 14-10-2018 IPR001623 DnaJ domain VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.597 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.60.260.20 257 365 1.5E-28 T 14-10-2018 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:1.10.287.110 1 116 1.1E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 261 346 3.53E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VAB027_1498 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF00226 DnaJ domain 5 67 3.9E-27 T 14-10-2018 IPR001623 DnaJ domain VAB027_942 61a171c3ef40786b669cd672489980e7 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 1.4E-75 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VAB027_942 61a171c3ef40786b669cd672489980e7 148 Pfam PF00376 MerR family regulatory protein 4 40 3.3E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_942 61a171c3ef40786b669cd672489980e7 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_942 61a171c3ef40786b669cd672489980e7 148 SUPERFAMILY SSF46955 3 125 1.94E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_942 61a171c3ef40786b669cd672489980e7 148 SMART SM00422 3 71 8.3E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_942 61a171c3ef40786b669cd672489980e7 148 Gene3D G3DSA:1.10.1660.10 1 126 8.3E-33 T 14-10-2018 VAB027_942 61a171c3ef40786b669cd672489980e7 148 Pfam PF09278 MerR, DNA binding 45 110 4.2E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VAB027_942 61a171c3ef40786b669cd672489980e7 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 4.1E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_942 61a171c3ef40786b669cd672489980e7 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.1E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_942 61a171c3ef40786b669cd672489980e7 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 4.1E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 Gene3D G3DSA:3.40.190.10 163 269 5.3E-22 T 14-10-2018 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 SUPERFAMILY SSF46785 2 110 7.89E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 Gene3D G3DSA:1.10.10.10 5 70 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 SUPERFAMILY SSF53850 89 294 9.05E-29 T 14-10-2018 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 Gene3D G3DSA:3.40.190.10 91 283 5.3E-22 T 14-10-2018 VAB027_421 c17a127535d81a7c50f356932e5d6e5e 301 Pfam PF03466 LysR substrate binding domain 88 295 4.4E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2403 f0bba5c64a503b13148afd5821fcd171 420 Gene3D G3DSA:3.40.50.12240 7 420 3.8E-90 T 14-10-2018 VAB027_2403 f0bba5c64a503b13148afd5821fcd171 420 SMART SM00382 145 323 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2403 f0bba5c64a503b13148afd5821fcd171 420 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 329 338 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2403 f0bba5c64a503b13148afd5821fcd171 420 SUPERFAMILY SSF52540 82 344 2.17E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2403 f0bba5c64a503b13148afd5821fcd171 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 338 2.5E-43 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3085 b4906fef6f4b81919d090053df955c89 241 SUPERFAMILY SSF50249 6 76 1.28E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3085 b4906fef6f4b81919d090053df955c89 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 23.35 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VAB027_3085 b4906fef6f4b81919d090053df955c89 241 SUPERFAMILY SSF57863 86 159 1.94E-13 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VAB027_3085 b4906fef6f4b81919d090053df955c89 241 Gene3D G3DSA:2.40.50.140 2 79 7.8E-34 T 14-10-2018 VAB027_3085 b4906fef6f4b81919d090053df955c89 241 Pfam PF11967 Recombination protein O N terminal 5 77 2.2E-24 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VAB027_3085 b4906fef6f4b81919d090053df955c89 241 Gene3D G3DSA:1.20.1440.120 80 239 1.9E-52 T 14-10-2018 VAB027_3085 b4906fef6f4b81919d090053df955c89 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.1E-42 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VAB027_3085 b4906fef6f4b81919d090053df955c89 241 Pfam PF02565 Recombination protein O C terminal 85 226 5.7E-25 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 1.7E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 1.7E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 1.7E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 17.1 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 TIGRFAM TIGR00077 lspA: signal peptidase II 8 166 3.0E-50 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3164 dc819d44120b88f96be3db1183be1252 171 Pfam PF01252 Signal peptidase (SPase) II 19 161 4.5E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAB027_3615 760a62f0115a58fce32654193c942517 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 321 3.6E-70 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VAB027_3615 760a62f0115a58fce32654193c942517 353 Gene3D G3DSA:3.40.50.2000 162 344 1.4E-60 T 14-10-2018 VAB027_3615 760a62f0115a58fce32654193c942517 353 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 338 5.7E-148 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VAB027_3615 760a62f0115a58fce32654193c942517 353 SUPERFAMILY SSF53756 1 338 4.08E-99 T 14-10-2018 VAB027_3615 760a62f0115a58fce32654193c942517 353 Gene3D G3DSA:3.40.50.2000 1 149 9.1E-54 T 14-10-2018 VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 Gene3D G3DSA:1.10.10.10 9 105 2.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 Pfam PF01022 Bacterial regulatory protein, arsR family 30 75 5.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 SUPERFAMILY SSF46785 11 104 1.48E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 3.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 3.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_524 2b45c3736b7592ed73ce39d9a859b24d 105 SMART SM00418 23 101 2.1E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.395 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 Pfam PF01259 SAICAR synthetase 22 293 4.1E-48 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 Gene3D G3DSA:3.30.470.20 129 284 6.1E-40 T 14-10-2018 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 1.5E-229 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 Gene3D G3DSA:3.30.200.20 12 128 1.1E-24 T 14-10-2018 VAB027_1869 091fa0b7aeac5c233edececd6c24834c 368 SUPERFAMILY SSF56104 14 344 3.92E-67 T 14-10-2018 VAB027_58 2b38ca0593135d6a7eccbdcf5875ad15 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 2.5E-24 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_58 2b38ca0593135d6a7eccbdcf5875ad15 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 4.2E-172 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VAB027_58 2b38ca0593135d6a7eccbdcf5875ad15 370 Pfam PF04055 Radical SAM superfamily 81 221 1.7E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_58 2b38ca0593135d6a7eccbdcf5875ad15 370 SMART SM00876 256 359 1.1E-33 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_58 2b38ca0593135d6a7eccbdcf5875ad15 370 SUPERFAMILY SSF102114 37 333 5.36E-51 T 14-10-2018 VAB027_58 2b38ca0593135d6a7eccbdcf5875ad15 370 Gene3D G3DSA:3.20.20.70 10 367 8.5E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 Pfam PF01235 Sodium:alanine symporter family 54 449 1.4E-140 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 9.0E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 9.0E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 9.0E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 9.0E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 9.0E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 9.0E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 1.2E-155 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2094 185ee615b61f6620aac560cbb624dfc9 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2983 45d11c7eb0b81e9710f14ce5f8bc5869 274 SUPERFAMILY SSF51556 13 266 1.44E-73 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_2983 45d11c7eb0b81e9710f14ce5f8bc5869 274 PIRSF PIRSF005902 8 269 3.2E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 VAB027_2983 45d11c7eb0b81e9710f14ce5f8bc5869 274 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 13 21 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAB027_2983 45d11c7eb0b81e9710f14ce5f8bc5869 274 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 201 217 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAB027_2983 45d11c7eb0b81e9710f14ce5f8bc5869 274 Pfam PF01026 TatD related DNase 14 264 2.3E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 VAB027_2983 45d11c7eb0b81e9710f14ce5f8bc5869 274 Gene3D G3DSA:3.20.20.140 10 267 3.8E-80 T 14-10-2018 VAB027_1729 0c59874182bb8688a3ef5fd2eb3a1826 182 Pfam PF00881 Nitroreductase family 8 161 8.6E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VAB027_1729 0c59874182bb8688a3ef5fd2eb3a1826 182 PIRSF PIRSF000232 1 182 6.6E-62 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VAB027_1729 0c59874182bb8688a3ef5fd2eb3a1826 182 Gene3D G3DSA:3.40.109.10 1 182 8.3E-44 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAB027_1729 0c59874182bb8688a3ef5fd2eb3a1826 182 SUPERFAMILY SSF55469 1 181 1.01E-41 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAB027_2309 bf2b6254c3c6461016d4de84096ad008 88 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 4.1E-19 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VAB027_1834 855ec42bf63b99b1a2e0d8b15e935eba 195 PIRSF PIRSF028788 3 195 2.7E-34 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VAB027_1834 855ec42bf63b99b1a2e0d8b15e935eba 195 Gene3D G3DSA:3.30.1460.30 3 100 2.8E-16 T 14-10-2018 VAB027_1834 855ec42bf63b99b1a2e0d8b15e935eba 195 Pfam PF04994 TfoX C-terminal domain 112 190 2.9E-28 T 14-10-2018 IPR007077 TfoX, C-terminal VAB027_1834 855ec42bf63b99b1a2e0d8b15e935eba 195 Gene3D G3DSA:1.10.150.20 111 195 1.8E-18 T 14-10-2018 VAB027_1834 855ec42bf63b99b1a2e0d8b15e935eba 195 SUPERFAMILY SSF159894 3 100 2.25E-26 T 14-10-2018 VAB027_1834 855ec42bf63b99b1a2e0d8b15e935eba 195 Pfam PF04993 TfoX N-terminal domain 9 99 8.5E-24 T 14-10-2018 IPR007076 TfoX, N-terminal VAB027_1315 cee452b5130b35f922977d36e6a884d1 238 SUPERFAMILY SSF52540 8 228 7.83E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1315 cee452b5130b35f922977d36e6a884d1 238 Pfam PF00005 ABC transporter 32 184 1.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1315 cee452b5130b35f922977d36e6a884d1 238 Gene3D G3DSA:3.40.50.300 10 230 1.1E-55 T 14-10-2018 VAB027_1315 cee452b5130b35f922977d36e6a884d1 238 SMART SM00382 39 232 4.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 Gene3D G3DSA:3.90.226.10 4 225 2.1E-84 T 14-10-2018 VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.334 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 SUPERFAMILY SSF52096 17 284 5.12E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 5.2E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 Gene3D G3DSA:1.10.12.10 226 276 2.7E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VAB027_2609 0aaf383577a2e79bb128bee5d84821bb 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 3.5E-145 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VAB027_1412 626995cb91765d4f622203d4718db88e 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.175 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1412 626995cb91765d4f622203d4718db88e 142 SMART SM00562 3 140 6.3E-93 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 SUPERFAMILY SSF54919 1 140 6.42E-62 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 Gene3D G3DSA:3.30.70.141 1 141 3.6E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.4E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.4E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.4E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.4E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.4E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1412 626995cb91765d4f622203d4718db88e 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.7E-58 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 119 205 20.021 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 12 210 38.328 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 Gene3D G3DSA:1.10.287.1080 119 210 1.4E-30 T 14-10-2018 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 209 2.8E-19 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 60 109 6.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 SUPERFAMILY SSF101386 122 210 7.85E-26 T 14-10-2018 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 SUPERFAMILY SSF141734 13 123 1.12E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 37 109 8.1E-33 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 122 205 9.9E-33 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VAB027_1820 023d33c8f7803b5b5e3d0142d7c94c2e 210 Gene3D G3DSA:3.10.20.400 8 101 4.1E-38 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 SUPERFAMILY SSF51445 314 779 3.94E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Gene3D G3DSA:2.10.10.20 20 88 3.3E-13 T 14-10-2018 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Pfam PF06483 Chitinase C 804 969 3.6E-73 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 SMART SM00495 37 83 1.1E-16 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 SMART SM00495 1001 1046 0.0013 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Gene3D G3DSA:3.20.20.80 298 646 7.2E-82 T 14-10-2018 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 SUPERFAMILY SSF54556 626 746 5.72E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Gene3D G3DSA:3.20.20.80 748 776 3.2E-12 T 14-10-2018 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 SUPERFAMILY SSF51055 22 86 5.36E-17 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Gene3D G3DSA:2.60.40.10 193 281 7.4E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Gene3D G3DSA:2.60.40.10 95 186 2.1E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Pfam PF00704 Glycosyl hydrolases family 18 320 776 4.6E-87 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 Gene3D G3DSA:3.10.50.10 675 747 3.2E-12 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 SMART SM00636 319 776 5.5E-124 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VAB027_476 9dcb7cbe62b371d9c2734fe9b0ef2fa5 1051 ProSitePatterns PS01095 Chitinases family 18 active site. 468 476 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAB027_833 978f97734a5dbc2be228120eb2c8b608 324 Gene3D G3DSA:3.40.50.2300 135 318 1.3E-13 T 14-10-2018 VAB027_833 978f97734a5dbc2be228120eb2c8b608 324 Gene3D G3DSA:3.40.50.2300 39 298 1.3E-13 T 14-10-2018 VAB027_3208 cffe2cef9bb458a62c23560392defbe9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.6E-46 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAB027_3208 cffe2cef9bb458a62c23560392defbe9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.6E-46 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAB027_3208 cffe2cef9bb458a62c23560392defbe9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.6E-46 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAB027_3208 cffe2cef9bb458a62c23560392defbe9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.6E-46 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAB027_3208 cffe2cef9bb458a62c23560392defbe9 111 Pfam PF03840 Preprotein translocase SecG subunit 4 72 6.6E-23 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAB027_3208 cffe2cef9bb458a62c23560392defbe9 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.3E-26 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAB027_2105 22e7ff72476560438e4377f6e4bb7a7b 310 SUPERFAMILY SSF52402 29 255 1.31E-56 T 14-10-2018 VAB027_2105 22e7ff72476560438e4377f6e4bb7a7b 310 Gene3D G3DSA:3.40.50.620 2 263 6.7E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2105 22e7ff72476560438e4377f6e4bb7a7b 310 Pfam PF01171 PP-loop family 43 203 7.6E-15 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VAB027_2105 22e7ff72476560438e4377f6e4bb7a7b 310 PIRSF PIRSF004976 2 271 3.0E-75 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VAB027_2105 22e7ff72476560438e4377f6e4bb7a7b 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 3 270 57.993 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 SUPERFAMILY SSF51735 5 159 9.66E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2741 88b56960f6c58ad873afa389d690449c 337 PIRSF PIRSF000148 4 337 1.7E-134 T 14-10-2018 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 SUPERFAMILY SSF55347 131 320 2.35E-78 T 14-10-2018 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.581 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 Gene3D G3DSA:3.40.50.720 7 331 7.9E-155 T 14-10-2018 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 Gene3D G3DSA:3.30.360.10 130 316 7.9E-155 T 14-10-2018 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 SMART SM00859 6 121 1.9E-43 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.4E-63 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 5.6E-33 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAB027_2741 88b56960f6c58ad873afa389d690449c 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 1.4E-130 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_93 f049a659dfb7db6e78186eec3b88d2a6 142 Pfam PF00583 Acetyltransferase (GNAT) family 12 107 2.1E-9 T 14-10-2018 IPR000182 GNAT domain VAB027_93 f049a659dfb7db6e78186eec3b88d2a6 142 SUPERFAMILY SSF55729 1 127 4.36E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_93 f049a659dfb7db6e78186eec3b88d2a6 142 Gene3D G3DSA:3.40.630.30 2 138 2.5E-17 T 14-10-2018 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 8.5E-130 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Gene3D G3DSA:3.40.50.10950 398 709 1.8E-137 T 14-10-2018 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 SUPERFAMILY SSF75138 229 353 1.18E-23 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 SUPERFAMILY SSF52540 1 240 5.13E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Pfam PF07085 DRTGG domain 233 344 1.1E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.6E-137 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Gene3D G3DSA:3.40.50.300 1 227 8.5E-12 T 14-10-2018 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Gene3D G3DSA:3.40.50.10750 529 682 1.8E-137 T 14-10-2018 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Pfam PF13500 AAA domain 3 229 4.7E-49 T 14-10-2018 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 SUPERFAMILY SSF53659 392 709 3.21E-96 T 14-10-2018 VAB027_1778 e336bce4f2ba7f41e4f7e50a8f30e40d 714 Gene3D G3DSA:3.40.1390.20 228 365 3.7E-13 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 SUPERFAMILY SSF51215 7 143 7.72E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 Gene3D G3DSA:1.10.10.60 169 224 9.9E-17 T 14-10-2018 VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 SUPERFAMILY SSF46689 168 216 2.37E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 Pfam PF02311 AraC-like ligand binding domain 12 143 3.6E-27 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 SUPERFAMILY SSF46689 218 263 5.82E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 Gene3D G3DSA:1.10.10.60 225 266 1.3E-11 T 14-10-2018 VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 Pfam PF12833 Helix-turn-helix domain 188 261 2.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_3677 bd95dac9db1a2c3e9a798a8d7204cae5 267 SMART SM00342 182 264 5.4E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 Gene3D G3DSA:3.40.50.1000 5 218 7.3E-65 T 14-10-2018 IPR023214 HAD superfamily VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 6.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 Gene3D G3DSA:1.10.150.240 16 95 7.3E-65 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 195 1.8E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 SUPERFAMILY SSF56784 2 222 1.28E-51 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 2.7E-101 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VAB027_556 45eb06d4454e8c891b9b2b6f32d98da7 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 1.1E-23 T 14-10-2018 VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PIRSF PIRSF005900 1 156 1.6E-43 T 14-10-2018 IPR002177 DNA-binding protein Dps VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 SUPERFAMILY SSF47240 2 155 1.33E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 7.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 7.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 7.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 Gene3D G3DSA:1.20.1260.10 1 156 6.2E-58 T 14-10-2018 IPR012347 Ferritin-like VAB027_119 9c5a451fb7f54e52ca7f2c49ef67ef91 156 Pfam PF00210 Ferritin-like domain 18 155 6.4E-24 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 Pfam PF02119 Flagellar P-ring protein 20 360 5.1E-137 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 4.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_2835 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 40.166 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 4.6E-48 T 14-10-2018 IPR017926 Glutamine amidotransferase VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 Gene3D G3DSA:3.50.30.20 2 151 1.7E-62 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 SUPERFAMILY SSF52317 153 377 6.07E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 Gene3D G3DSA:3.40.50.880 152 379 2.5E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 SMART SM01097 3 133 7.0E-94 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 49.031 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.8E-40 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.8E-40 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.8E-40 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.8E-40 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.8E-40 T 14-10-2018 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.6E-150 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.5E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3018 54cf6a5791f3844b29f22c5301940581 379 SUPERFAMILY SSF52021 4 142 3.66E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_3317 f35282693cfbb515be9f0ad90133d68a 208 Gene3D G3DSA:3.40.50.150 1 206 1.3E-76 T 14-10-2018 VAB027_3317 f35282693cfbb515be9f0ad90133d68a 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.365 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VAB027_3317 f35282693cfbb515be9f0ad90133d68a 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 4.1E-80 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VAB027_3317 f35282693cfbb515be9f0ad90133d68a 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 1.3E-70 T 14-10-2018 VAB027_3317 f35282693cfbb515be9f0ad90133d68a 208 SUPERFAMILY SSF53335 14 204 1.67E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3317 f35282693cfbb515be9f0ad90133d68a 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VAB027_966 eab8271d1e5e1fd6ea7cc5bc2693f2e4 306 SUPERFAMILY SSF141523 95 229 1.7E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAB027_966 eab8271d1e5e1fd6ea7cc5bc2693f2e4 306 Pfam PF03734 L,D-transpeptidase catalytic domain 95 229 8.7E-22 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VAB027_966 eab8271d1e5e1fd6ea7cc5bc2693f2e4 306 Gene3D G3DSA:2.40.440.10 18 297 2.7E-83 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAB027_966 eab8271d1e5e1fd6ea7cc5bc2693f2e4 306 SUPERFAMILY SSF54106 37 82 2.62E-7 T 14-10-2018 VAB027_966 eab8271d1e5e1fd6ea7cc5bc2693f2e4 306 Pfam PF01476 LysM domain 39 82 1.4E-9 T 14-10-2018 IPR018392 LysM domain VAB027_966 eab8271d1e5e1fd6ea7cc5bc2693f2e4 306 SMART SM00257 38 82 3.0E-8 T 14-10-2018 IPR018392 LysM domain VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 SUPERFAMILY SSF53187 6 376 2.14E-66 T 14-10-2018 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 Pfam PF01546 Peptidase family M20/M25/M40 65 373 6.4E-45 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 Gene3D G3DSA:3.40.630.10 9 364 7.6E-129 T 14-10-2018 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 Gene3D G3DSA:3.30.70.360 181 294 7.6E-129 T 14-10-2018 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.293 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 Pfam PF07687 Peptidase dimerisation domain 177 284 7.2E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.0E-186 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAB027_2782 20bf1f24356aa12f07cdfb0ff82c9e01 377 SUPERFAMILY SSF55031 181 290 7.92E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 1.4E-83 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 Gene3D G3DSA:3.40.50.150 40 260 2.3E-75 T 14-10-2018 VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.385 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 SUPERFAMILY SSF53335 28 258 1.05E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_74 cc55da4743d023b40d8adf8d2d0192e3 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 259 2.1E-103 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VAB027_721 d1c1fe15fb9689a7793791a07a12cb6c 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 4 101 2.1E-8 T 14-10-2018 IPR009387 Toxin HigB-2 VAB027_721 d1c1fe15fb9689a7793791a07a12cb6c 110 PIRSF PIRSF039032 1 110 5.3E-44 T 14-10-2018 IPR009387 Toxin HigB-2 VAB027_2404 d88adb5c18a5b688ba9784541a9e0b12 485 Gene3D G3DSA:3.55.50.30 17 94 1.3E-5 T 14-10-2018 VAB027_2404 d88adb5c18a5b688ba9784541a9e0b12 485 Pfam PF03958 Bacterial type II/III secretion system short domain 171 278 2.8E-10 T 14-10-2018 IPR005644 NolW-like VAB027_2404 d88adb5c18a5b688ba9784541a9e0b12 485 Pfam PF00263 Bacterial type II and III secretion system protein 329 484 7.9E-26 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAB027_2404 d88adb5c18a5b688ba9784541a9e0b12 485 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 430 463 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VAB027_2404 d88adb5c18a5b688ba9784541a9e0b12 485 PRINTS PR00811 Bacterial general secretion pathway protein D signature 197 207 4.3E-5 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_2404 d88adb5c18a5b688ba9784541a9e0b12 485 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 467 4.3E-5 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 5.3E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 1.1E-149 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 Gene3D G3DSA:3.90.650.10 172 346 1.7E-74 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 SUPERFAMILY SSF56042 172 342 1.11E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 Gene3D G3DSA:3.30.1330.10 7 171 1.2E-70 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 343 2.0E-39 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.384 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAB027_2869 83ef66b6fdebdac8b4523ecff1874c65 346 SUPERFAMILY SSF55326 8 171 1.79E-54 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_28 4db31587dc91421e9972645261cf3eda 213 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 210 1.5E-70 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VAB027_28 4db31587dc91421e9972645261cf3eda 213 Pfam PF03006 Haemolysin-III related 6 203 5.1E-38 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 3.0E-33 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 PIRSF PIRSF004848 1 236 1.6E-76 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 SUPERFAMILY SSF51419 1 228 8.64E-81 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.6E-85 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 Gene3D G3DSA:3.20.20.10 1 235 9.3E-86 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAB027_3362 f86a5fa19bebaffb4312c547313df14c 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.258 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 SMART SM01038 744 1017 3.1E-115 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 SUPERFAMILY SSF74650 731 1017 3.61E-95 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 445 459 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Gene3D G3DSA:2.60.40.10 217 331 5.8E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 383 408 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Gene3D G3DSA:2.60.40.10 623 722 3.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Pfam PF00703 Glycosyl hydrolases family 2 218 331 2.9E-14 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 333 626 1.1E-110 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Pfam PF16353 Domain of unknown function(DUF4981) 634 719 9.6E-13 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Gene3D G3DSA:2.70.98.10 728 1019 5.2E-96 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 342 356 9.9E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 373 391 9.9E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 529 544 9.9E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 445 460 9.9E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 9.9E-37 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Gene3D G3DSA:2.60.120.260 7 215 2.1E-82 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Gene3D G3DSA:3.20.20.80 332 622 1.3E-123 T 14-10-2018 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 SUPERFAMILY SSF51445 332 622 4.15E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 3.7E-57 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 SUPERFAMILY SSF49303 619 721 1.8E-21 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 SUPERFAMILY SSF49785 9 215 4.39E-65 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Pfam PF02929 Beta galactosidase small chain 748 1016 1.3E-68 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 SUPERFAMILY SSF49303 218 331 6.62E-22 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VAB027_2968 32cde5c233b5e93595404645fd24117c 1029 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1019 16.66 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 3.5E-41 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PIRSF PIRSF004862 30 580 9.2E-160 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 Gene3D G3DSA:3.30.300.30 152 247 2.0E-9 T 14-10-2018 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 1.9E-24 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 1.9E-24 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 1.9E-24 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 1.9E-24 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 1.9E-24 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 1.5E-55 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF VAB027_2765 b54f3d5d1b7f2abbd88e7ae3a813fdfa 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.1E-77 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAB027_3360 30c2ad65656111c0323a66daa2102a16 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.7E-127 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VAB027_3360 30c2ad65656111c0323a66daa2102a16 368 SUPERFAMILY SSF52540 4 334 2.99E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3360 30c2ad65656111c0323a66daa2102a16 368 Gene3D G3DSA:3.30.450.90 1 97 1.7E-22 T 14-10-2018 VAB027_3360 30c2ad65656111c0323a66daa2102a16 368 Gene3D G3DSA:3.40.50.300 99 356 4.1E-88 T 14-10-2018 VAB027_3360 30c2ad65656111c0323a66daa2102a16 368 Pfam PF00437 Type II/IV secretion system protein 28 269 3.6E-38 T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Gene3D G3DSA:3.90.320.10 895 1196 2.3E-100 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 SUPERFAMILY SSF52980 904 1190 4.24E-83 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Gene3D G3DSA:3.40.50.300 446 849 1.2E-154 T 14-10-2018 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Gene3D G3DSA:1.10.3170.10 160 350 2.1E-150 T 14-10-2018 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Gene3D G3DSA:1.10.486.10 584 732 1.2E-154 T 14-10-2018 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 437 2.9E-57 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Pfam PF12705 PD-(D/E)XK nuclease superfamily 966 1174 3.4E-6 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 SUPERFAMILY SSF52540 16 825 1.58E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 10 1190 22.879 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 12 1189 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Pfam PF13361 UvrD-like helicase C-terminal domain 443 813 1.6E-14 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAB027_2954 e4907a88f8f67f5c81cbfa48955a4f97 1208 Gene3D G3DSA:3.40.50.300 12 437 2.1E-150 T 14-10-2018 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 PIRSF PIRSF001456 3 360 4.8E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 Gene3D G3DSA:3.60.150.10 1 361 1.2E-162 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 6.0E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 SUPERFAMILY SSF103263 4 352 4.06E-151 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 Pfam PF01264 Chorismate synthase 10 345 3.0E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_2749 b3b3bdd141c78e9d0fcb5a0380f35d1f 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.261 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAB027_1027 772c0983ef8d451b1de053631d5cc894 210 SUPERFAMILY SSF48452 40 179 4.23E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1027 772c0983ef8d451b1de053631d5cc894 210 Gene3D G3DSA:1.25.40.10 18 187 6.0E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1027 772c0983ef8d451b1de053631d5cc894 210 Pfam PF14559 Tetratricopeptide repeat 136 183 3.5E-6 T 14-10-2018 VAB027_1204 c4b425fc9a2eefb43b0e6b1ee4c86c0d 277 Pfam PF01497 Periplasmic binding protein 25 252 1.9E-37 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VAB027_1204 c4b425fc9a2eefb43b0e6b1ee4c86c0d 277 Gene3D G3DSA:3.40.50.1980 19 137 4.0E-35 T 14-10-2018 VAB027_1204 c4b425fc9a2eefb43b0e6b1ee4c86c0d 277 Gene3D G3DSA:3.40.50.1980 138 277 3.9E-40 T 14-10-2018 VAB027_1204 c4b425fc9a2eefb43b0e6b1ee4c86c0d 277 SUPERFAMILY SSF53807 23 277 1.69E-45 T 14-10-2018 VAB027_2035 3591e2e9e73f0d3b20b2c58a4edc91dc 251 PIRSF PIRSF039085 7 250 1.2E-111 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAB027_2035 3591e2e9e73f0d3b20b2c58a4edc91dc 251 Gene3D G3DSA:3.40.50.300 8 251 2.5E-79 T 14-10-2018 VAB027_2035 3591e2e9e73f0d3b20b2c58a4edc91dc 251 Pfam PF00005 ABC transporter 26 174 3.9E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2035 3591e2e9e73f0d3b20b2c58a4edc91dc 251 SUPERFAMILY SSF52540 10 244 3.68E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2035 3591e2e9e73f0d3b20b2c58a4edc91dc 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2035 3591e2e9e73f0d3b20b2c58a4edc91dc 251 SMART SM00382 35 222 2.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2868 eae88d091284df43784c096127beaf3b 208 Gene3D G3DSA:3.40.50.2020 1 208 6.9E-73 T 14-10-2018 VAB027_2868 eae88d091284df43784c096127beaf3b 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.5E-91 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VAB027_2868 eae88d091284df43784c096127beaf3b 208 SUPERFAMILY SSF53271 4 206 2.49E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_2868 eae88d091284df43784c096127beaf3b 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.5E-65 T 14-10-2018 VAB027_2868 eae88d091284df43784c096127beaf3b 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.515 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 Gene3D G3DSA:3.30.565.10 402 562 3.9E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 Gene3D G3DSA:3.40.50.12740 1 161 3.6E-33 T 14-10-2018 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 SUPERFAMILY SSF81606 179 378 9.42E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 SMART SM00448 1 115 5.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 SMART SM00331 165 380 1.8E-11 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 Pfam PF00072 Response regulator receiver domain 3 115 9.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 380 8.5E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 Pfam PF13581 Histidine kinase-like ATPase domain 434 552 4.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 SUPERFAMILY SSF52172 2 161 5.41E-31 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1047 5c19e140710e7cbad4f73fe48155a233 568 Gene3D G3DSA:3.60.40.10 162 391 3.3E-37 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAB027_3594 3f057ceb91806f677128546805252241 432 SUPERFAMILY SSF53756 107 290 2.3E-5 T 14-10-2018 VAB027_3594 3f057ceb91806f677128546805252241 432 TIGRFAM TIGR04396 surf_polysacc: surface carbohydrate biosynthesis protein 3 290 1.5E-22 T 14-10-2018 IPR030906 Surface carbohydrate biosynthesis protein VAB027_783 52dad53e4e1086aa60f209472cd8da98 557 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 97 461 2.0E-32 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VAB027_783 52dad53e4e1086aa60f209472cd8da98 557 Gene3D G3DSA:3.40.640.10 117 440 1.9E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_783 52dad53e4e1086aa60f209472cd8da98 557 SUPERFAMILY SSF53383 50 554 1.27E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Pfam PF02811 PHP domain 8 171 3.8E-43 T 14-10-2018 IPR004013 PHP domain GO:0003824 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 SMART SM00481 7 74 1.3E-24 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Gene3D G3DSA:1.10.150.870 775 886 3.9E-5 T 14-10-2018 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 2.2E-173 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 SUPERFAMILY SSF89550 5 263 2.94E-13 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Gene3D G3DSA:3.20.20.140 1 270 3.1E-91 T 14-10-2018 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Gene3D G3DSA:1.10.10.1600 433 510 8.3E-31 T 14-10-2018 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.1E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 1.3E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAB027_2886 003a6c9fff58f39da1e04fe2ae5ec175 1159 Gene3D G3DSA:2.40.50.140 986 1072 8.0E-7 T 14-10-2018 VAB027_164 3f403ebd3c617a5080f468454c699189 194 SUPERFAMILY SSF54523 7 83 7.46E-8 T 14-10-2018 VAB027_164 3f403ebd3c617a5080f468454c699189 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.9E-22 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAB027_164 3f403ebd3c617a5080f468454c699189 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.9E-22 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAB027_164 3f403ebd3c617a5080f468454c699189 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 3.9E-22 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAB027_164 3f403ebd3c617a5080f468454c699189 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_164 3f403ebd3c617a5080f468454c699189 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_164 3f403ebd3c617a5080f468454c699189 194 Pfam PF12019 Type II transport protein GspH 42 181 3.0E-9 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VAB027_164 3f403ebd3c617a5080f468454c699189 194 Gene3D G3DSA:3.55.40.10 33 194 8.7E-57 T 14-10-2018 VAB027_2277 d7401c66b46d319ffb184cf252fdeda8 223 SMART SM00382 30 218 5.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2277 d7401c66b46d319ffb184cf252fdeda8 223 Gene3D G3DSA:3.40.50.300 1 223 1.5E-58 T 14-10-2018 VAB027_2277 d7401c66b46d319ffb184cf252fdeda8 223 SUPERFAMILY SSF52540 1 218 7.61E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2277 d7401c66b46d319ffb184cf252fdeda8 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2277 d7401c66b46d319ffb184cf252fdeda8 223 Pfam PF00005 ABC transporter 21 167 5.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_909 41b3aa1b908882423c60b5758b4e77d9 1181 Pfam PF06761 Intracellular multiplication and human macrophage-killing 510 824 6.5E-75 T 14-10-2018 IPR009612 ImcF-related VAB027_909 41b3aa1b908882423c60b5758b4e77d9 1181 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 25 1177 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF VAB027_909 41b3aa1b908882423c60b5758b4e77d9 1181 Pfam PF06744 Type VI secretion protein IcmF C-terminal 931 1129 1.3E-59 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VAB027_909 41b3aa1b908882423c60b5758b4e77d9 1181 SUPERFAMILY SSF52540 127 308 4.46E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_909 41b3aa1b908882423c60b5758b4e77d9 1181 Pfam PF14331 ImcF-related N-terminal domain 203 460 1.2E-77 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain VAB027_515 76dd6ebd400932bd86830a1c926d38df 193 Pfam PF09335 SNARE associated Golgi protein 35 152 5.5E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein VAB027_1863 1be7b8edb420d9ae1612158803281382 417 SUPERFAMILY SSF53383 5 409 2.02E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1863 1be7b8edb420d9ae1612158803281382 417 Gene3D G3DSA:3.90.1150.10 24 404 3.8E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1863 1be7b8edb420d9ae1612158803281382 417 Pfam PF00266 Aminotransferase class-V 25 401 6.3E-67 T 14-10-2018 IPR000192 Aminotransferase class V domain VAB027_1863 1be7b8edb420d9ae1612158803281382 417 Gene3D G3DSA:3.40.640.10 33 289 3.8E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1863 1be7b8edb420d9ae1612158803281382 417 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 1.2E-188 T 14-10-2018 IPR011340 Cysteine desulfurase-related VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.411 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 Gene3D G3DSA:3.30.1510.10 129 264 1.5E-191 T 14-10-2018 VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 Pfam PF01268 Formate--tetrahydrofolate ligase 4 581 3.2E-239 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 Gene3D G3DSA:3.10.410.10 469 558 3.0E-31 T 14-10-2018 VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 SUPERFAMILY SSF52540 4 580 3.85E-216 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 Gene3D G3DSA:3.40.50.300 4 454 1.5E-191 T 14-10-2018 VAB027_552 411bd4824f894ab57fba28ca1e491c40 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 SUPERFAMILY SSF50692 752 951 4.77E-38 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 47 1.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 SUPERFAMILY SSF53706 59 646 2.75E-200 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Gene3D G3DSA:3.40.228.10 195 394 6.1E-133 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 1.9E-52 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Gene3D G3DSA:3.40.50.740 126 617 6.1E-133 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Gene3D G3DSA:2.40.40.20 767 951 2.6E-47 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 SMART SM00926 61 115 3.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 PIRSF PIRSF036643 21 581 1.9E-114 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 PIRSF PIRSF036643 786 950 4.4E-16 T 14-10-2018 VAB027_2159 04da047f8c6b792876c9ace1353ad236 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.2E-20 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAB027_1480 117510545c46526773e26250ecdce462 605 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 433 439 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_1480 117510545c46526773e26250ecdce462 605 SUPERFAMILY SSF53335 151 599 3.04E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1480 117510545c46526773e26250ecdce462 605 Gene3D G3DSA:3.40.50.150 265 604 9.0E-61 T 14-10-2018 VAB027_1480 117510545c46526773e26250ecdce462 605 Pfam PF02384 N-6 DNA Methylase 264 593 1.3E-41 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAB027_1480 117510545c46526773e26250ecdce462 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 477 501 8.5E-20 T 14-10-2018 VAB027_1480 117510545c46526773e26250ecdce462 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 319 333 8.5E-20 T 14-10-2018 VAB027_1480 117510545c46526773e26250ecdce462 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 302 8.5E-20 T 14-10-2018 VAB027_1480 117510545c46526773e26250ecdce462 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 430 442 8.5E-20 T 14-10-2018 VAB027_1945 af9c9918f1de5dc0e773272688c7b425 182 Gene3D G3DSA:3.30.1380.10 61 182 1.0E-12 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAB027_1945 af9c9918f1de5dc0e773272688c7b425 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.6E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAB027_1945 af9c9918f1de5dc0e773272688c7b425 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 30 179 2.5E-73 T 14-10-2018 IPR010275 Protein of unknown function DUF882 VAB027_1945 af9c9918f1de5dc0e773272688c7b425 182 SUPERFAMILY SSF55166 52 179 1.88E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 Gene3D G3DSA:3.30.1340.10 3 86 2.7E-28 T 14-10-2018 IPR035895 HPr-like superfamily VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 3.6E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 3.3E-12 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 3.3E-12 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 3.3E-12 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 SUPERFAMILY SSF55594 5 91 4.58E-25 T 14-10-2018 IPR035895 HPr-like superfamily VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 2.1E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1333 9c3d661e9c7b5522cec7609041069c7b 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VAB027_342 5fa9f11cb478ab154ccc7134ab6ccd7b 439 SUPERFAMILY SSF51905 165 296 6.8E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_342 5fa9f11cb478ab154ccc7134ab6ccd7b 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 40 157 2.9E-11 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_342 5fa9f11cb478ab154ccc7134ab6ccd7b 439 SUPERFAMILY SSF51905 40 370 7.87E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_342 5fa9f11cb478ab154ccc7134ab6ccd7b 439 Gene3D G3DSA:3.50.50.100 38 435 5.8E-70 T 14-10-2018 VAB027_2075 29dcbc63cc4a507f90c9b041e3434d0f 218 SUPERFAMILY SSF48371 23 187 1.07E-12 T 14-10-2018 IPR016024 Armadillo-type fold VAB027_2075 29dcbc63cc4a507f90c9b041e3434d0f 218 Gene3D G3DSA:1.25.10.10 11 202 7.2E-12 T 14-10-2018 IPR011989 Armadillo-like helical VAB027_884 75796822f27b7249b86fb49c37c284ae 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 2.5E-21 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VAB027_884 75796822f27b7249b86fb49c37c284ae 443 SUPERFAMILY SSF63380 237 316 1.7E-15 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_884 75796822f27b7249b86fb49c37c284ae 443 Pfam PF08022 FAD-binding domain 237 314 3.1E-8 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 VAB027_884 75796822f27b7249b86fb49c37c284ae 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 407 415 3.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_884 75796822f27b7249b86fb49c37c284ae 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 325 344 3.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_884 75796822f27b7249b86fb49c37c284ae 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 254 266 3.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_884 75796822f27b7249b86fb49c37c284ae 443 SUPERFAMILY SSF52343 319 440 1.96E-18 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_884 75796822f27b7249b86fb49c37c284ae 443 Gene3D G3DSA:2.40.30.10 219 314 1.3E-14 T 14-10-2018 VAB027_884 75796822f27b7249b86fb49c37c284ae 443 Gene3D G3DSA:3.40.50.80 318 443 1.6E-16 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_2950 c928cab5807f7ccd51181a142e55a2f0 134 Pfam PF11012 Protein of unknown function (DUF2850) 48 125 2.3E-29 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VAB027_3545 06a494b8aa1be15148e0f5b551600696 396 SUPERFAMILY SSF103473 9 373 3.01E-37 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_3545 06a494b8aa1be15148e0f5b551600696 396 Gene3D G3DSA:1.20.1250.20 196 381 5.6E-32 T 14-10-2018 VAB027_3545 06a494b8aa1be15148e0f5b551600696 396 PIRSF PIRSF004925 3 389 7.8E-102 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VAB027_3545 06a494b8aa1be15148e0f5b551600696 396 Gene3D G3DSA:1.20.1250.20 5 190 9.8E-17 T 14-10-2018 VAB027_3545 06a494b8aa1be15148e0f5b551600696 396 Pfam PF12832 MFS_1 like family 13 361 1.0E-42 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 310 5.2E-34 T 14-10-2018 IPR000160 GGDEF domain VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 SUPERFAMILY SSF55785 22 125 1.1E-5 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 Gene3D G3DSA:3.30.70.270 149 311 4.2E-44 T 14-10-2018 VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 307 1.1E-31 T 14-10-2018 IPR000160 GGDEF domain VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 SMART SM00267 144 311 2.6E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 Gene3D G3DSA:3.30.450.20 42 146 2.0E-6 T 14-10-2018 VAB027_199 48fca400a9b4243596ce0ff38aa2584f 312 SUPERFAMILY SSF55073 160 309 3.22E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_937 fe693db5f67c66ba9d500bb7d31fd45b 297 Pfam PF00892 EamA-like transporter family 9 136 1.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_937 fe693db5f67c66ba9d500bb7d31fd45b 297 Pfam PF00892 EamA-like transporter family 151 281 1.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_937 fe693db5f67c66ba9d500bb7d31fd45b 297 SUPERFAMILY SSF103481 39 139 7.32E-15 T 14-10-2018 VAB027_937 fe693db5f67c66ba9d500bb7d31fd45b 297 SUPERFAMILY SSF103481 187 284 1.7E-15 T 14-10-2018 VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 1.2E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 Pfam PF00005 ABC transporter 38 189 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 8.4E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 SUPERFAMILY SSF52540 9 261 2.3E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 Gene3D G3DSA:3.40.50.300 6 330 4.8E-97 T 14-10-2018 VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1776 df054a2f4eb6ec94d2190d7235e6c193 330 SMART SM00382 46 239 1.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 Gene3D G3DSA:3.40.1410.10 89 223 4.7E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 SMART SM00866 90 227 5.2E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 2.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 2.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 SUPERFAMILY SSF64288 94 230 2.51E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 Pfam PF07702 UTRA domain 90 227 2.0E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 3 232 4.8E-100 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 SUPERFAMILY SSF46785 3 71 5.71E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 Gene3D G3DSA:1.10.10.10 1 68 7.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_1885 e02c1b7385fd14edb5a83c97095e8aa3 236 SMART SM00345 8 67 3.3E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Gene3D G3DSA:3.40.50.300 158 347 3.6E-75 T 14-10-2018 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 SMART SM01086 766 855 1.3E-37 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Gene3D G3DSA:1.10.8.60 766 857 7.4E-27 T 14-10-2018 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 SUPERFAMILY SSF52540 159 545 5.62E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 SMART SM00382 198 344 1.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 SMART SM00382 597 748 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Gene3D G3DSA:3.40.50.300 550 764 7.6E-90 T 14-10-2018 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 SUPERFAMILY SSF52540 546 850 4.27E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Gene3D G3DSA:1.10.1780.10 1 148 3.3E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.4E-13 T 14-10-2018 IPR004176 Clp, N-terminal VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.4E-12 T 14-10-2018 IPR004176 Clp, N-terminal VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 2.5E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 3.7E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 Gene3D G3DSA:3.40.50.300 348 544 2.5E-66 T 14-10-2018 VAB027_3124 eb373e54f4f772c1438cef78ff2a231c 857 SUPERFAMILY SSF81923 4 156 1.47E-41 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 PIRSF PIRSF000110 3 489 2.7E-178 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 SUPERFAMILY SSF55347 181 489 5.23E-114 T 14-10-2018 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 1.7E-114 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 5.8E-199 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 Gene3D G3DSA:3.40.50.720 4 179 3.9E-58 T 14-10-2018 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 SUPERFAMILY SSF51735 4 194 9.32E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 2.1E-63 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 Gene3D G3DSA:3.30.360.10 180 488 2.8E-124 T 14-10-2018 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.772 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1219 78034b9cb29b66e320a8943b789be8d3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 2.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 Gene3D G3DSA:3.40.50.1980 231 346 1.0E-125 T 14-10-2018 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 Gene3D G3DSA:3.40.50.1980 30 229 1.0E-125 T 14-10-2018 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 SUPERFAMILY SSF53720 4 424 1.96E-91 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PIRSF PIRSF000099 1 427 1.1E-168 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 Pfam PF00815 Histidinol dehydrogenase 26 424 3.1E-170 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 2.2E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 9.4E-165 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_1814 00c9ec8f91e07ca49c70441b9f4f9836 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.094 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAB027_2798 0418664a1fe89d90f7d34093a417a049 417 Pfam PF00860 Permease family 3 371 5.1E-93 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VAB027_2798 0418664a1fe89d90f7d34093a417a049 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAB027_2798 0418664a1fe89d90f7d34093a417a049 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 4.7E-112 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAB027_2582 d7bb79d8f83190d16c19b1d37f3646ac 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 1.2E-72 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VAB027_2582 d7bb79d8f83190d16c19b1d37f3646ac 220 SUPERFAMILY SSF56784 1 213 4.69E-32 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_2582 d7bb79d8f83190d16c19b1d37f3646ac 220 Gene3D G3DSA:3.40.50.1000 6 216 7.7E-63 T 14-10-2018 IPR023214 HAD superfamily VAB027_2582 d7bb79d8f83190d16c19b1d37f3646ac 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 2.7E-29 T 14-10-2018 VAB027_2582 d7bb79d8f83190d16c19b1d37f3646ac 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 7.1E-31 T 14-10-2018 VAB027_2582 d7bb79d8f83190d16c19b1d37f3646ac 220 Gene3D G3DSA:1.20.1440.100 17 90 7.7E-63 T 14-10-2018 VAB027_1121 2fe55ad885df8796baa1159cc2563d0e 140 Gene3D G3DSA:3.30.300.20 44 140 3.7E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_1121 2fe55ad885df8796baa1159cc2563d0e 140 Pfam PF02566 OsmC-like protein 38 133 1.5E-18 T 14-10-2018 IPR003718 OsmC/Ohr family VAB027_1121 2fe55ad885df8796baa1159cc2563d0e 140 Gene3D G3DSA:2.20.25.10 1 43 3.8E-24 T 14-10-2018 VAB027_1121 2fe55ad885df8796baa1159cc2563d0e 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 3.2E-53 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 VAB027_1121 2fe55ad885df8796baa1159cc2563d0e 140 SUPERFAMILY SSF82784 1 135 7.59E-42 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VAB027_1039 1b72cd421c8e3b722ff7a0d19abbb63a 152 Gene3D G3DSA:2.40.50.180 23 133 1.5E-34 T 14-10-2018 VAB027_1039 1b72cd421c8e3b722ff7a0d19abbb63a 152 SMART SM00260 2 138 3.0E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1039 1b72cd421c8e3b722ff7a0d19abbb63a 152 Gene3D G3DSA:2.30.30.40 7 132 1.5E-34 T 14-10-2018 VAB027_1039 1b72cd421c8e3b722ff7a0d19abbb63a 152 SUPERFAMILY SSF50341 4 140 1.44E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_1039 1b72cd421c8e3b722ff7a0d19abbb63a 152 Pfam PF01584 CheW-like domain 4 139 2.3E-31 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 SMART SM00304 207 259 7.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 SMART SM00304 260 312 31.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 501 2.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 Gene3D G3DSA:1.10.287.950 207 536 3.7E-72 T 14-10-2018 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 Pfam PF17200 Single Cache domain 2 42 182 7.8E-28 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 SMART SM01049 36 126 3.9E-25 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 SUPERFAMILY SSF58104 227 536 2.75E-69 T 14-10-2018 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 Gene3D G3DSA:3.30.450.20 38 183 2.3E-33 T 14-10-2018 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 Pfam PF00672 HAMP domain 207 249 2.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1925 2f50295efbf850abd85ec6974af8aced 536 SMART SM00283 274 535 1.4E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1993 7d907b54fa5500901e282fccd1c14002 306 Pfam PF04393 Protein of unknown function (DUF535) 25 294 4.5E-81 T 14-10-2018 IPR007488 Protein of unknown function DUF535 VAB027_2768 521333c9132885bff259330627a0da8a 346 SMART SM00388 120 186 8.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2768 521333c9132885bff259330627a0da8a 346 SMART SM00387 229 335 1.9E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2768 521333c9132885bff259330627a0da8a 346 Pfam PF13188 PAS domain 16 59 4.4E-7 T 14-10-2018 IPR000014 PAS domain VAB027_2768 521333c9132885bff259330627a0da8a 346 Gene3D G3DSA:3.30.450.20 7 106 8.2E-7 T 14-10-2018 VAB027_2768 521333c9132885bff259330627a0da8a 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 334 6.7E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2768 521333c9132885bff259330627a0da8a 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 1.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2768 521333c9132885bff259330627a0da8a 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 1.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2768 521333c9132885bff259330627a0da8a 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 1.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2768 521333c9132885bff259330627a0da8a 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 1.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2768 521333c9132885bff259330627a0da8a 346 SUPERFAMILY SSF55874 175 333 1.44E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2768 521333c9132885bff259330627a0da8a 346 Gene3D G3DSA:1.10.287.130 107 183 3.6E-9 T 14-10-2018 VAB027_2768 521333c9132885bff259330627a0da8a 346 SMART SM00091 16 79 3.1E-5 T 14-10-2018 IPR000014 PAS domain VAB027_2768 521333c9132885bff259330627a0da8a 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 120 184 1.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2768 521333c9132885bff259330627a0da8a 346 SUPERFAMILY SSF47384 115 186 5.1E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2768 521333c9132885bff259330627a0da8a 346 SUPERFAMILY SSF55785 2 83 6.49E-9 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2768 521333c9132885bff259330627a0da8a 346 Gene3D G3DSA:3.30.565.10 188 345 6.5E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3390 24707e9caa3041b74ff1e22ce86b7cfb 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 156 3.1E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_3390 24707e9caa3041b74ff1e22ce86b7cfb 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 4.7E-116 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VAB027_3390 24707e9caa3041b74ff1e22ce86b7cfb 269 PIRSF PIRSF000903 1 269 6.1E-123 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VAB027_3390 24707e9caa3041b74ff1e22ce86b7cfb 269 SUPERFAMILY SSF56300 4 252 1.83E-58 T 14-10-2018 VAB027_3390 24707e9caa3041b74ff1e22ce86b7cfb 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 50.566 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VAB027_3390 24707e9caa3041b74ff1e22ce86b7cfb 269 Gene3D G3DSA:3.60.21.10 2 267 3.3E-79 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_1712 814004a712eda70daf4e746774660962 324 Gene3D G3DSA:3.30.450.20 9 146 4.6E-6 T 14-10-2018 VAB027_1712 814004a712eda70daf4e746774660962 324 SUPERFAMILY SSF55785 14 91 5.12E-5 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1712 814004a712eda70daf4e746774660962 324 SMART SM00267 141 317 1.6E-47 T 14-10-2018 IPR000160 GGDEF domain VAB027_1712 814004a712eda70daf4e746774660962 324 Gene3D G3DSA:3.30.70.270 147 323 1.9E-42 T 14-10-2018 VAB027_1712 814004a712eda70daf4e746774660962 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 316 3.9E-41 T 14-10-2018 IPR000160 GGDEF domain VAB027_1712 814004a712eda70daf4e746774660962 324 SUPERFAMILY SSF55073 157 318 3.45E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1712 814004a712eda70daf4e746774660962 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 312 9.4E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Pfam PF12838 4Fe-4S dicluster domain 377 430 7.2E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Gene3D G3DSA:3.40.50.11540 145 290 6.2E-14 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 SUPERFAMILY SSF46548 336 446 6.93E-22 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 7.0E-36 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 2.2E-201 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 4.3E-49 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 SUPERFAMILY SSF142019 95 302 4.18E-61 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Gene3D G3DSA:1.10.1060.10 364 445 7.6E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 732 248.829 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VAB027_1699 c86454db09626b164aabc88587ee3f9d 732 Pfam PF10531 SLBB domain 296 345 3.6E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_1363 d42b25b493854ec95192248eca060f45 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 3.8E-124 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.0E-33 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 Gene3D G3DSA:3.40.630.10 181 497 2.6E-141 T 14-10-2018 VAB027_1363 d42b25b493854ec95192248eca060f45 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.609 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 SUPERFAMILY SSF52949 1 184 1.24E-50 T 14-10-2018 VAB027_1363 d42b25b493854ec95192248eca060f45 503 SUPERFAMILY SSF53187 180 495 1.73E-125 T 14-10-2018 VAB027_1363 d42b25b493854ec95192248eca060f45 503 Gene3D G3DSA:3.40.220.10 1 159 3.8E-59 T 14-10-2018 VAB027_1363 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.5E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.5E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.5E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.5E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.5E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1363 d42b25b493854ec95192248eca060f45 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAB027_2759 21f90771ad876398be30585600d96c3e 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 8.1E-20 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VAB027_933 73992a5a6278c20a6543c3a50b14ba63 413 SUPERFAMILY SSF49785 307 412 1.45E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_933 73992a5a6278c20a6543c3a50b14ba63 413 Gene3D G3DSA:3.40.390.10 24 251 2.1E-7 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VAB027_933 73992a5a6278c20a6543c3a50b14ba63 413 Gene3D G3DSA:2.60.120.260 325 412 1.4E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_933 73992a5a6278c20a6543c3a50b14ba63 413 SUPERFAMILY SSF55486 22 249 1.11E-16 T 14-10-2018 VAB027_933 73992a5a6278c20a6543c3a50b14ba63 413 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 192 1.6E-29 T 14-10-2018 VAB027_933 73992a5a6278c20a6543c3a50b14ba63 413 Pfam PF01483 Proprotein convertase P-domain 331 412 4.7E-20 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VAB027_2365 762c7cfc47dccb77cb40ec1dd68a1358 220 Gene3D G3DSA:1.20.120.1820 4 126 1.5E-40 T 14-10-2018 VAB027_2365 762c7cfc47dccb77cb40ec1dd68a1358 220 Pfam PF02613 Nitrate reductase delta subunit 51 183 9.3E-39 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VAB027_2365 762c7cfc47dccb77cb40ec1dd68a1358 220 SUPERFAMILY SSF89155 9 215 3.14E-51 T 14-10-2018 IPR036411 TorD-like superfamily VAB027_2365 762c7cfc47dccb77cb40ec1dd68a1358 220 Gene3D G3DSA:1.20.1280.20 129 220 4.0E-26 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_2365 762c7cfc47dccb77cb40ec1dd68a1358 220 Hamap MF_01150 Chaperone protein TorD [torD]. 4 212 33.959 T 14-10-2018 IPR023069 Chaperone TorD VAB027_2605 e8e22a945f724adadb53d4b681485301 623 Gene3D G3DSA:1.20.1250.20 9 421 1.7E-25 T 14-10-2018 VAB027_2605 e8e22a945f724adadb53d4b681485301 623 SUPERFAMILY SSF103473 14 423 6.28E-26 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2605 e8e22a945f724adadb53d4b681485301 623 Pfam PF07690 Major Facilitator Superfamily 18 317 1.8E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_2605 e8e22a945f724adadb53d4b681485301 623 Pfam PF01553 Acyltransferase 440 566 4.5E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_2605 e8e22a945f724adadb53d4b681485301 623 SMART SM00563 455 569 1.6E-36 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_2605 e8e22a945f724adadb53d4b681485301 623 SUPERFAMILY SSF69593 406 568 5.49E-28 T 14-10-2018 VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 Gene3D G3DSA:3.90.1380.10 1 79 8.5E-32 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 Pfam PF14821 Threonine synthase N terminus 8 78 6.5E-9 T 14-10-2018 IPR029144 Threonine synthase, N-terminal VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 Gene3D G3DSA:3.40.50.1100 83 392 1.7E-137 T 14-10-2018 VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 Gene3D G3DSA:3.40.50.1100 101 399 1.7E-137 T 14-10-2018 VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 SUPERFAMILY SSF53686 1 424 3.8E-131 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 390 7.0E-114 T 14-10-2018 IPR004450 Threonine synthase-like VAB027_2992 bd818229954cb8fc7bd5f28128792747 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 366 2.7E-24 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 SUPERFAMILY SSF51011 523 615 3.02E-14 T 14-10-2018 VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 1 603 3.1E-193 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 Pfam PF00128 Alpha amylase, catalytic domain 166 217 1.5E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 SUPERFAMILY SSF51445 79 509 8.16E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 SUPERFAMILY SSF81296 1 91 8.05E-9 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 Gene3D G3DSA:3.20.20.80 83 516 2.2E-144 T 14-10-2018 VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 SMART SM00642 133 506 3.1E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 Gene3D G3DSA:2.60.40.10 1 81 8.3E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_1102 b957371d2820c24dbf5190b0e125ce24 623 Gene3D G3DSA:2.60.40.1180 522 618 4.8E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAB027_547 3285dbc03d1c352a89467ed89b9dad88 122 SUPERFAMILY SSF54593 12 120 7.83E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_547 3285dbc03d1c352a89467ed89b9dad88 122 Gene3D G3DSA:3.10.180.10 8 122 1.3E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 Gene3D G3DSA:4.10.520.10 1 90 5.5E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 SMART SM00411 1 90 3.9E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 SUPERFAMILY SSF47729 1 90 9.27E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.2E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.2E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.2E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2563 e38dd537793165c1f07a62edfd55a182 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.7E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_1693 2f04913ab5ef8ab4f8dd5f1f0e794388 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 4.7E-79 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VAB027_1693 2f04913ab5ef8ab4f8dd5f1f0e794388 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 4.0E-80 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 SUPERFAMILY SSF55486 1 493 1.2E-121 T 14-10-2018 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 Gene3D G3DSA:1.10.1370.30 1 494 1.6E-199 T 14-10-2018 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 6.0E-47 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 10 492 2.7E-93 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_2087 faae866ea5ade6ebdbbf696379cf779d 494 PIRSF PIRSF006615 1 494 8.3E-199 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 SUPERFAMILY SSF54862 37 172 5.5E-31 T 14-10-2018 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.921 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.5E-17 T 14-10-2018 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 PIRSF PIRSF005784 3 188 2.7E-86 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 Gene3D G3DSA:1.10.15.40 38 81 7.6E-8 T 14-10-2018 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.3E-88 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 Gene3D G3DSA:3.30.70.20 82 181 1.2E-22 T 14-10-2018 VAB027_1700 8992020dfc7b4712a4a2d90b87a17887 195 Pfam PF04060 Putative Fe-S cluster 44 75 8.6E-15 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.40.50.2300 709 855 2.6E-41 T 14-10-2018 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF55874 516 686 1.44E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SMART SM00388 459 527 2.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF55785 861 933 5.9E-7 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SMART SM00448 722 835 9.9E-46 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:1.10.8.500 376 430 7.5E-17 T 14-10-2018 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.30.450.20 859 955 1.4E-6 T 14-10-2018 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.30.450.20 270 358 1.4E-8 T 14-10-2018 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SMART SM00091 873 938 0.0036 T 14-10-2018 IPR000014 PAS domain VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SMART SM00387 573 684 2.4E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Pfam PF00672 HAMP domain 379 427 2.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SMART SM00304 377 430 4.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Pfam PF00072 Response regulator receiver domain 725 835 2.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Pfam PF13188 PAS domain 879 914 7.7E-4 T 14-10-2018 IPR000014 PAS domain VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF52172 717 846 1.57E-41 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.30.565.10 528 689 5.4E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:1.10.287.130 445 527 1.0E-19 T 14-10-2018 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF47384 446 527 3.14E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_3227 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF158472 378 428 7.98E-11 T 14-10-2018 VAB027_954 f508ddf3be7e3bb3add04a5b82fa6ad2 287 Gene3D G3DSA:1.10.3720.10 61 285 6.7E-35 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_954 f508ddf3be7e3bb3add04a5b82fa6ad2 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.4E-99 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VAB027_954 f508ddf3be7e3bb3add04a5b82fa6ad2 287 SUPERFAMILY SSF161098 21 274 9.16E-42 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_954 f508ddf3be7e3bb3add04a5b82fa6ad2 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 5.4E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2083 ebdc1c20742acab9291897ba047c0a0f 484 Pfam PF02321 Outer membrane efflux protein 300 475 7.9E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2083 ebdc1c20742acab9291897ba047c0a0f 484 Pfam PF02321 Outer membrane efflux protein 77 267 2.5E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2083 ebdc1c20742acab9291897ba047c0a0f 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 478 4.8E-174 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 VAB027_2083 ebdc1c20742acab9291897ba047c0a0f 484 Gene3D G3DSA:1.20.1600.10 68 478 1.3E-142 T 14-10-2018 VAB027_2083 ebdc1c20742acab9291897ba047c0a0f 484 SUPERFAMILY SSF56954 17 480 2.49E-91 T 14-10-2018 VAB027_2083 ebdc1c20742acab9291897ba047c0a0f 484 Gene3D G3DSA:2.20.200.10 113 363 1.3E-142 T 14-10-2018 VAB027_57 372649c947a0558cb1f8d13337465148 256 SUPERFAMILY SSF110399 1 235 4.19E-85 T 14-10-2018 VAB027_57 372649c947a0558cb1f8d13337465148 256 Gene3D G3DSA:3.20.20.70 1 253 3.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_57 372649c947a0558cb1f8d13337465148 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 2.7E-111 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VAB027_57 372649c947a0558cb1f8d13337465148 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.171 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 Pfam PF09101 Exotoxin A binding 24 290 6.3E-151 T 14-10-2018 IPR015185 Exotoxin A, binding VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 Pfam PF09102 Exotoxin A, targeting 295 430 9.2E-14 T 14-10-2018 IPR015186 Exotoxin A, middle domain VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 Gene3D G3DSA:3.90.1350.10 281 447 1.1E-88 T 14-10-2018 IPR036478 Exotoxin A, middle domain superfamily VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 Pfam PF09009 Exotoxin A catalytic 457 655 1.4E-37 T 14-10-2018 IPR015099 Exotoxin A catalytic domain GO:0047286 VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 SUPERFAMILY SSF49899 24 291 6.96E-116 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 SUPERFAMILY SSF56864 293 453 3.27E-65 T 14-10-2018 IPR036478 Exotoxin A, middle domain superfamily VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 Gene3D G3DSA:2.60.120.200 15 268 8.0E-127 T 14-10-2018 VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 Gene3D G3DSA:3.90.175.10 453 660 9.3E-106 T 14-10-2018 VAB027_2292 b82638fd7ce5af01b9e3e9a449fee917 661 SUPERFAMILY SSF56399 444 659 7.48E-71 T 14-10-2018 VAB027_1289 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.0E-42 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1289 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Gene3D G3DSA:3.30.420.100 1 117 4.4E-43 T 14-10-2018 VAB027_1289 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.505 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1289 e2fa128cc17694ea2a1ebda4dc76d4e2 117 SUPERFAMILY SSF53137 3 115 7.41E-51 T 14-10-2018 VAB027_1289 e2fa128cc17694ea2a1ebda4dc76d4e2 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.3E-43 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 Pfam PF00171 Aldehyde dehydrogenase family 8 278 6.3E-15 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 SUPERFAMILY SSF53720 4 408 8.12E-112 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 Gene3D G3DSA:3.40.605.10 15 408 6.1E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 PIRSF PIRSF000151 1 416 2.7E-165 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 38.985 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 4.0E-167 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAB027_2913 f68d2ca4fcbb198198b76093a6b8a40d 416 Gene3D G3DSA:3.40.309.10 223 373 6.1E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.528 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 Pfam PF00162 Phosphoglycerate kinase 8 373 1.5E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 SUPERFAMILY SSF53748 4 382 3.18E-143 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 Gene3D G3DSA:3.40.50.1260 165 373 3.5E-152 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PIRSF PIRSF000724 1 387 7.9E-135 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 Gene3D G3DSA:3.40.50.1260 10 379 3.5E-152 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.8E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_3346 040ab3d034b5b057e306fb2ab3ac9820 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 Gene3D G3DSA:3.20.20.70 2 337 3.4E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.5E-142 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 SUPERFAMILY SSF51569 7 335 2.49E-145 T 14-10-2018 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.5E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.5E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.5E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.5E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.5E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.5E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 SMART SM01004 9 333 8.4E-246 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_92 22d0fad2c374604d81bb4219a914193e 347 PIRSF PIRSF001415 2 336 2.5E-152 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAB027_2753 04f9e5bc38b03fa26a339adb724b3194 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 8.9E-80 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VAB027_2753 04f9e5bc38b03fa26a339adb724b3194 260 Pfam PF01311 Bacterial export proteins, family 1 13 246 8.6E-57 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAB027_2753 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAB027_2753 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAB027_2753 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAB027_2753 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAB027_1387 28af90130328b6b2d4e1ab4330de3bfa 273 Gene3D G3DSA:3.40.50.300 25 270 7.5E-67 T 14-10-2018 VAB027_1387 28af90130328b6b2d4e1ab4330de3bfa 273 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1387 28af90130328b6b2d4e1ab4330de3bfa 273 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 27 273 3.5E-122 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VAB027_1387 28af90130328b6b2d4e1ab4330de3bfa 273 Pfam PF00005 ABC transporter 42 198 2.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1387 28af90130328b6b2d4e1ab4330de3bfa 273 SUPERFAMILY SSF52540 23 259 1.69E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1387 28af90130328b6b2d4e1ab4330de3bfa 273 SMART SM00382 51 254 6.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_716 9a6c7ef97a5ab788d8790c1940811369 123 SUPERFAMILY SSF54427 3 117 1.01E-10 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_716 9a6c7ef97a5ab788d8790c1940811369 123 Gene3D G3DSA:3.10.450.50 2 116 6.2E-7 T 14-10-2018 VAB027_716 9a6c7ef97a5ab788d8790c1940811369 123 Pfam PF14534 Domain of unknown function (DUF4440) 8 109 3.8E-7 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 VAB027_729 620ece0b0e5284e3baebd86479cb9979 173 Pfam PF10387 Protein of unknown function (DUF2442) 4 61 3.6E-10 T 14-10-2018 IPR018841 Protein of unknown function DUF2442 VAB027_729 620ece0b0e5284e3baebd86479cb9979 173 SUPERFAMILY SSF143880 1 73 3.14E-11 T 14-10-2018 IPR036782 NE0471-like, N-terminal VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 SMART SM00487 23 220 1.8E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 Pfam PF03880 DbpA RNA binding domain 387 457 7.5E-22 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.7E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 Gene3D G3DSA:3.40.50.300 2 210 8.2E-74 T 14-10-2018 VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 Gene3D G3DSA:3.30.70.330 386 459 1.5E-18 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 Gene3D G3DSA:3.40.50.300 211 371 1.4E-46 T 14-10-2018 VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 SMART SM00490 257 338 4.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 3.2E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_1305 b201a7d2775bcac1791a3fd6f7672195 460 SUPERFAMILY SSF52540 73 354 7.14E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2985 5dec9dcea35c1c3c61da0eea4269be50 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.231 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VAB027_2985 5dec9dcea35c1c3c61da0eea4269be50 257 Pfam PF03883 Peroxide stress protein YaaA 1 242 1.2E-92 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VAB027_864 030e99000d7ec7666a342af638ebe584 310 Pfam PF01882 Protein of unknown function DUF58 54 138 1.1E-24 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VAB027_864 030e99000d7ec7666a342af638ebe584 310 SUPERFAMILY SSF53300 90 234 2.05E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_78 10cb7641c86ef5eadd4210d52d83113f 133 Pfam PF02416 mttA/Hcf106 family 4 36 6.9E-6 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VAB027_78 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.5E-26 T 14-10-2018 VAB027_78 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.5E-26 T 14-10-2018 VAB027_78 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.5E-26 T 14-10-2018 VAB027_78 10cb7641c86ef5eadd4210d52d83113f 133 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 124 18.531 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VAB027_78 10cb7641c86ef5eadd4210d52d83113f 133 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 9.5E-35 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.0E-130 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 Gene3D G3DSA:1.10.3860.10 1 425 7.0E-141 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 2.2E-49 T 14-10-2018 VAB027_938 1b4f0f2d51156fc855fbc15b260035fd 433 SUPERFAMILY SSF118215 9 407 1.7E-121 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 Gene3D G3DSA:3.40.640.10 49 253 3.9E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.478 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 3.2E-121 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 Pfam PF00155 Aminotransferase class I and II 43 339 3.3E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 Gene3D G3DSA:3.90.1150.10 4 336 3.9E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1815 8c0376214c1f52212e97aa915f7004d1 346 SUPERFAMILY SSF53383 11 344 4.68E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 PIRSF PIRSF002144 1 92 8.0E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 Gene3D G3DSA:3.30.860.10 1 92 6.2E-44 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1277 e27e0493fa345e5c0619c92bb100427c 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAB027_155 11f243de1dfec2e36ca06e76e130b55f 628 Pfam PF05170 AsmA family 1 569 4.2E-179 T 14-10-2018 IPR007844 AsmA VAB027_3334 b01e4c48bcafaa8cea7ef386dafd968d 586 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 9.3E-22 T 14-10-2018 VAB027_3334 b01e4c48bcafaa8cea7ef386dafd968d 586 Gene3D G3DSA:3.40.630.30 313 456 8.5E-7 T 14-10-2018 VAB027_3334 b01e4c48bcafaa8cea7ef386dafd968d 586 SUPERFAMILY SSF69593 61 248 2.09E-5 T 14-10-2018 VAB027_3334 b01e4c48bcafaa8cea7ef386dafd968d 586 SUPERFAMILY SSF55729 312 452 5.19E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3334 b01e4c48bcafaa8cea7ef386dafd968d 586 SMART SM00563 75 199 1.8E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 Gene3D G3DSA:1.10.10.10 1 83 1.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 Gene3D G3DSA:3.40.190.290 89 297 2.4E-63 T 14-10-2018 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 Pfam PF03466 LysR substrate binding domain 93 269 4.0E-12 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 SUPERFAMILY SSF46785 7 114 3.05E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 SUPERFAMILY SSF53850 93 272 7.6E-20 T 14-10-2018 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_786 b81c4b8901b58231fc7f72cba0d74e3c 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 6 296 1.5E-101 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 SUPERFAMILY SSF160246 1 140 6.8E-32 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 Gene3D G3DSA:3.30.300.160 63 140 2.4E-6 T 14-10-2018 VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 6.2E-241 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 Pfam PF00437 Type II/IV secretion system protein 189 455 2.9E-88 T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 Gene3D G3DSA:3.30.450.90 151 288 6.9E-46 T 14-10-2018 VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 40 141 2.1E-16 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 Gene3D G3DSA:3.40.50.300 289 561 3.1E-105 T 14-10-2018 VAB027_3050 da162583c179fb03cc65af1279f17fa2 562 SUPERFAMILY SSF52540 172 559 2.11E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 Gene3D G3DSA:3.10.20.30 1 106 7.4E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.1E-94 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 SUPERFAMILY SSF46548 107 226 9.77E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.3E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.3E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 Gene3D G3DSA:1.10.1060.10 107 244 6.8E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAB027_237 4c013f3be89d511b0d7ad1d2b60da4f2 252 SUPERFAMILY SSF54292 5 106 5.51E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 Pfam PF01037 Lrp/AsnC ligand binding domain 68 140 1.5E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.3E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.3E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.3E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 Gene3D G3DSA:3.30.70.920 55 137 1.9E-18 T 14-10-2018 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 SUPERFAMILY SSF54909 63 146 3.89E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 SMART SM00344 1 110 1.2E-31 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 SUPERFAMILY SSF46785 1 59 4.78E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2358 0ff1a7d8963d4151e13fa768b6a3b259 147 Gene3D G3DSA:1.10.10.10 1 54 3.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2036 f8db4b171a39dfbc69b0dfeed7fd22a9 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 349 1.3E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2036 f8db4b171a39dfbc69b0dfeed7fd22a9 365 SUPERFAMILY SSF161098 155 346 7.59E-41 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2036 f8db4b171a39dfbc69b0dfeed7fd22a9 365 Gene3D G3DSA:1.10.3720.10 149 363 8.8E-48 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2036 f8db4b171a39dfbc69b0dfeed7fd22a9 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 8.1E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 Gene3D G3DSA:3.40.50.300 1 176 1.6E-59 T 14-10-2018 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 325 3.8E-163 T 14-10-2018 IPR014317 Transcription activator PspF VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 3.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 3.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 SMART SM00382 25 177 4.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 SUPERFAMILY SSF46689 219 325 1.97E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 Gene3D G3DSA:1.10.10.60 271 327 1.1E-5 T 14-10-2018 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 Gene3D G3DSA:1.10.8.60 177 261 5.4E-27 T 14-10-2018 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 Pfam PF00158 Sigma-54 interaction domain 5 168 1.1E-58 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 SUPERFAMILY SSF52540 5 237 1.46E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_2326 340333e9126b7e5241bfe3ccbd9ce3d1 338 Pfam PF02954 Bacterial regulatory protein, Fis family 291 325 1.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 Gene3D G3DSA:2.40.30.20 102 205 1.2E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 Gene3D G3DSA:2.40.30.20 1 89 1.7E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 PIRSF PIRSF000498 1 211 1.9E-80 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 Pfam PF00677 Lumazine binding domain 100 184 1.1E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 Pfam PF00677 Lumazine binding domain 3 87 3.9E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 SUPERFAMILY SSF63380 1 89 8.08E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 SUPERFAMILY SSF63380 93 197 1.11E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_2910 509b3925df6688cb98bf0ad79fd00bcf 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 4.6E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_3601 5d30e11b7bb0792a9048d06b144c64e9 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 7 207 1.4E-56 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like VAB027_3601 5d30e11b7bb0792a9048d06b144c64e9 212 SUPERFAMILY SSF51161 3 205 2.77E-36 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_3601 5d30e11b7bb0792a9048d06b144c64e9 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 1.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3601 5d30e11b7bb0792a9048d06b144c64e9 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_3601 5d30e11b7bb0792a9048d06b144c64e9 212 Gene3D G3DSA:3.40.50.20 2 90 2.1E-12 T 14-10-2018 VAB027_3601 5d30e11b7bb0792a9048d06b144c64e9 212 Gene3D G3DSA:2.160.10.10 91 211 7.2E-24 T 14-10-2018 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 Pfam PF01245 Ribosomal protein L19 3 113 2.1E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 PIRSF PIRSF002191 1 117 7.2E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.2E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 6.5E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 6.5E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 6.5E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 SUPERFAMILY SSF50104 2 115 1.0E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 Gene3D G3DSA:2.30.30.790 2 117 1.6E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3278 b4d742ab9f943c6484c38abbdf0f05f1 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.25 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 SUPERFAMILY SSF48452 171 358 2.89E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 Gene3D G3DSA:1.25.40.10 39 282 7.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 Pfam PF13424 Tetratricopeptide repeat 249 312 2.4E-7 T 14-10-2018 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 Gene3D G3DSA:1.25.40.10 283 450 7.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 289 322 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 83 116 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 249 282 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_1537 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 409 442 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_427 59022627a14d596db0619c7a61bb8192 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 8.5E-35 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAB027_427 59022627a14d596db0619c7a61bb8192 144 Gene3D G3DSA:3.40.30.10 41 144 8.9E-33 T 14-10-2018 VAB027_427 59022627a14d596db0619c7a61bb8192 144 SUPERFAMILY SSF52833 29 142 2.5E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_427 59022627a14d596db0619c7a61bb8192 144 PIRSF PIRSF000077 38 142 5.7E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAB027_427 59022627a14d596db0619c7a61bb8192 144 Gene3D G3DSA:2.20.28.140 1 37 6.8E-16 T 14-10-2018 VAB027_427 59022627a14d596db0619c7a61bb8192 144 Pfam PF00085 Thioredoxin 43 140 4.7E-28 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VAB027_427 59022627a14d596db0619c7a61bb8192 144 PRINTS PR00421 Thioredoxin family signature 58 66 1.6E-7 T 14-10-2018 VAB027_427 59022627a14d596db0619c7a61bb8192 144 PRINTS PR00421 Thioredoxin family signature 106 117 1.6E-7 T 14-10-2018 VAB027_427 59022627a14d596db0619c7a61bb8192 144 PRINTS PR00421 Thioredoxin family signature 66 75 1.6E-7 T 14-10-2018 VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 SUPERFAMILY SSF46785 10 152 2.61E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 SMART SM00347 39 137 2.5E-25 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 8.9E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 8.9E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 8.9E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 Pfam PF01047 MarR family 46 103 9.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1122 85665f6db54c8e0e0d764bc8f7012040 152 Gene3D G3DSA:1.10.10.10 12 152 4.0E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 Gene3D G3DSA:3.40.50.2300 1 116 5.1E-29 T 14-10-2018 VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 SMART SM00448 3 111 3.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 SUPERFAMILY SSF46894 121 216 5.67E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 SMART SM00862 145 216 4.7E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 Pfam PF00072 Response regulator receiver domain 6 112 2.0E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 Gene3D G3DSA:1.10.10.10 117 218 4.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_597 92c330679c1f5b5ec3e5bed3879395ae 218 SUPERFAMILY SSF52172 4 171 2.56E-28 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 SMART SM01049 42 133 9.4E-34 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 Gene3D G3DSA:3.30.450.20 29 203 9.6E-49 T 14-10-2018 VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 Pfam PF07730 Histidine kinase 250 315 2.1E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 5.4E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 Pfam PF17200 Single Cache domain 2 45 192 8.3E-44 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 SUPERFAMILY SSF55874 322 443 9.82E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 PIRSF PIRSF037314 1 450 4.2E-189 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 Gene3D G3DSA:3.30.565.10 313 447 1.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1952 9a5358408a67fc25121ccf1a23e154c0 451 SMART SM00387 353 447 2.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 Pfam PF01546 Peptidase family M20/M25/M40 77 472 8.4E-21 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 4.3E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 14 486 2.6E-184 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 Pfam PF07687 Peptidase dimerisation domain 212 296 2.8E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 Gene3D G3DSA:3.40.630.10 385 490 5.1E-23 T 14-10-2018 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 Gene3D G3DSA:3.40.630.10 1 230 2.0E-64 T 14-10-2018 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 SUPERFAMILY SSF53187 15 486 2.44E-63 T 14-10-2018 VAB027_2919 219a4a629110d6edc6101ca717fa188d 490 PIRSF PIRSF016599 5 489 9.5E-224 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.5E-209 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 Gene3D G3DSA:3.30.70.260 247 344 2.6E-40 T 14-10-2018 VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 SUPERFAMILY SSF55021 248 343 8.58E-25 T 14-10-2018 VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 SMART SM00382 30 235 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 Gene3D G3DSA:3.40.50.300 1 246 4.7E-73 T 14-10-2018 VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 Pfam PF09383 NIL domain 268 339 4.0E-20 T 14-10-2018 IPR018449 NIL domain VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 Pfam PF00005 ABC transporter 21 169 2.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 SUPERFAMILY SSF52540 1 239 1.82E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 SMART SM00930 265 340 1.2E-27 T 14-10-2018 IPR018449 NIL domain VAB027_1543 34e0155089cb115b91b954433b78f0cb 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 4.6E-85 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 Pfam PF01578 Cytochrome C assembly protein 30 184 9.4E-30 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 4.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 4.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 4.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 4.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 4.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2693 2a6b5bbb4074841f5927a72772c8a5de 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 4.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 SUPERFAMILY SSF51055 340 386 1.18E-12 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 SUPERFAMILY SSF81296 26 218 1.96E-49 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 Gene3D G3DSA:2.10.10.20 346 389 4.1E-18 T 14-10-2018 VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 Pfam PF02839 Carbohydrate binding domain 363 388 8.8E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 1.0E-39 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 Gene3D G3DSA:2.70.50.50 26 219 4.9E-64 T 14-10-2018 VAB027_892 149a599b566c80f5d89f17dfc7b53d7f 389 SMART SM00495 346 389 1.6E-8 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 Pfam PF00563 EAL domain 523 755 4.8E-63 T 14-10-2018 IPR001633 EAL domain VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 503 9.3E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 SMART SM00267 328 507 1.3E-46 T 14-10-2018 IPR000160 GGDEF domain VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 SUPERFAMILY SSF141868 522 765 1.57E-67 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 Gene3D G3DSA:1.20.1480.50 242 336 3.2E-7 T 14-10-2018 VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 Gene3D G3DSA:3.20.20.450 519 767 2.0E-73 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 SUPERFAMILY SSF55073 344 508 1.1E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 Gene3D G3DSA:3.30.70.270 337 518 6.6E-47 T 14-10-2018 VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 3.2E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_3131 37f7f0781466eb9d60252010287f4fa5 769 SMART SM00052 517 760 7.8E-73 T 14-10-2018 IPR001633 EAL domain VAB027_616 0ebe160bb74f2171ca069f330274e713 580 SUPERFAMILY SSF55816 369 564 3.01E-39 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 372 538 9.8E-24 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 PRINTS PR01607 Apyrase family signature 215 232 9.3E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 PRINTS PR01607 Apyrase family signature 234 257 9.3E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 PRINTS PR01607 Apyrase family signature 274 294 9.3E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 PRINTS PR01607 Apyrase family signature 10 28 9.3E-14 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 Gene3D G3DSA:3.60.21.10 3 368 1.1E-87 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_616 0ebe160bb74f2171ca069f330274e713 580 Gene3D G3DSA:3.90.780.10 369 574 7.0E-32 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 251 1.4E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_616 0ebe160bb74f2171ca069f330274e713 580 SUPERFAMILY SSF56300 6 319 1.65E-73 T 14-10-2018 VAB027_1830 680c030cf168e1be7e3d6fa417beacf9 548 Gene3D G3DSA:3.40.640.10 122 387 2.6E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1830 680c030cf168e1be7e3d6fa417beacf9 548 SUPERFAMILY SSF53383 26 530 9.26E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1830 680c030cf168e1be7e3d6fa417beacf9 548 Gene3D G3DSA:3.90.1150.170 50 524 2.6E-111 T 14-10-2018 VAB027_1830 680c030cf168e1be7e3d6fa417beacf9 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 442 1.7E-53 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VAB027_1830 680c030cf168e1be7e3d6fa417beacf9 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 7 527 2.1E-289 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 SUPERFAMILY SSF46785 1 86 1.49E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 Gene3D G3DSA:1.10.10.10 1 92 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 Pfam PF03466 LysR substrate binding domain 87 290 2.5E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 SUPERFAMILY SSF53850 89 290 4.56E-35 T 14-10-2018 VAB027_2738 301f51440eba939a1a00a2d2556d8ee7 292 Gene3D G3DSA:3.40.190.290 93 291 1.0E-43 T 14-10-2018 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 SUPERFAMILY SSF55031 179 289 3.79E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 Pfam PF07687 Peptidase dimerisation domain 185 273 9.4E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 Gene3D G3DSA:3.40.630.10 16 362 1.4E-114 T 14-10-2018 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 Gene3D G3DSA:3.30.70.360 176 287 1.4E-114 T 14-10-2018 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 SUPERFAMILY SSF53187 7 365 1.1E-59 T 14-10-2018 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 Pfam PF01546 Peptidase family M20/M25/M40 72 365 1.7E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 PIRSF PIRSF001123 98 181 3.4E-5 T 14-10-2018 IPR008007 Peptidase M42 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 PIRSF PIRSF001123 231 368 0.0055 T 14-10-2018 IPR008007 Peptidase M42 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 PIRSF PIRSF001123 6 105 0.17 T 14-10-2018 IPR008007 Peptidase M42 VAB027_2021 39ef5fca87103e1460e01daa727f9d14 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 367 2.9E-188 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like VAB027_397 19db9f219f6955a575e97b5db098225e 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.5E-28 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_397 19db9f219f6955a575e97b5db098225e 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 9.6E-102 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAB027_397 19db9f219f6955a575e97b5db098225e 388 Gene3D G3DSA:3.40.50.720 222 388 7.4E-64 T 14-10-2018 VAB027_397 19db9f219f6955a575e97b5db098225e 388 PIRSF PIRSF000124 1 388 3.4E-136 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAB027_397 19db9f219f6955a575e97b5db098225e 388 SUPERFAMILY SSF51735 1 194 4.2E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_397 19db9f219f6955a575e97b5db098225e 388 SUPERFAMILY SSF48179 191 287 1.22E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_397 19db9f219f6955a575e97b5db098225e 388 Gene3D G3DSA:3.40.50.720 1 193 1.7E-57 T 14-10-2018 VAB027_397 19db9f219f6955a575e97b5db098225e 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.9E-7 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_397 19db9f219f6955a575e97b5db098225e 388 SUPERFAMILY SSF52413 283 387 6.41E-26 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VAB027_397 19db9f219f6955a575e97b5db098225e 388 SMART SM00984 300 387 7.7E-10 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_397 19db9f219f6955a575e97b5db098225e 388 Gene3D G3DSA:1.20.5.100 194 220 2.8E-20 T 14-10-2018 VAB027_397 19db9f219f6955a575e97b5db098225e 388 PIRSF PIRSF500134 338 388 1.9 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VAB027_397 19db9f219f6955a575e97b5db098225e 388 PIRSF PIRSF500134 1 344 3.2E-119 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VAB027_397 19db9f219f6955a575e97b5db098225e 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 5.0E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 SUPERFAMILY SSF51338 1 399 4.61E-28 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.409 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 Gene3D G3DSA:2.30.40.10 8 396 1.4E-160 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 Pfam PF01979 Amidohydrolase family 57 376 1.6E-15 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 Gene3D G3DSA:3.20.20.140 61 359 1.4E-160 T 14-10-2018 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 397 3.2E-169 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAB027_1884 c8a432c0881f6ec8eed610b329292fe8 402 SUPERFAMILY SSF51556 60 356 4.15E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_2935 3d148cdab721320175a1d2590d1b0410 106 PIRSF PIRSF003113 1 99 9.1E-40 T 14-10-2018 IPR002634 BolA protein VAB027_2935 3d148cdab721320175a1d2590d1b0410 106 SUPERFAMILY SSF82657 1 89 2.75E-32 T 14-10-2018 IPR036065 BolA-like superfamily VAB027_2935 3d148cdab721320175a1d2590d1b0410 106 Gene3D G3DSA:3.30.300.90 1 89 1.6E-35 T 14-10-2018 VAB027_2935 3d148cdab721320175a1d2590d1b0410 106 Pfam PF01722 BolA-like protein 10 83 2.7E-31 T 14-10-2018 IPR002634 BolA protein VAB027_624 3c0231e4fb1d1faa0e59f1ffe6a7994c 265 Pfam PF00563 EAL domain 29 252 3.0E-37 T 14-10-2018 IPR001633 EAL domain VAB027_624 3c0231e4fb1d1faa0e59f1ffe6a7994c 265 SMART SM00052 22 257 2.5E-10 T 14-10-2018 IPR001633 EAL domain VAB027_624 3c0231e4fb1d1faa0e59f1ffe6a7994c 265 SUPERFAMILY SSF141868 30 258 1.44E-41 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_624 3c0231e4fb1d1faa0e59f1ffe6a7994c 265 Gene3D G3DSA:3.20.20.450 14 264 1.4E-39 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 8.9E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 Gene3D G3DSA:1.10.287.950 213 542 6.4E-71 T 14-10-2018 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 SMART SM00283 280 541 1.6E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 SMART SM00304 213 265 1.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.9E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 1.9E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.9E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 Pfam PF00672 HAMP domain 214 260 1.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1153 7d36f66c95d9cb4fe9ed244cdd0903ae 542 SUPERFAMILY SSF58104 233 542 3.79E-69 T 14-10-2018 VAB027_3605 8ceaa4cc80624ed503e9fd4c4318622d 396 Gene3D G3DSA:3.90.25.40 201 311 4.7E-159 T 14-10-2018 VAB027_3605 8ceaa4cc80624ed503e9fd4c4318622d 396 SUPERFAMILY SSF51735 34 288 3.55E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3605 8ceaa4cc80624ed503e9fd4c4318622d 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 279 3.2E-45 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VAB027_3605 8ceaa4cc80624ed503e9fd4c4318622d 396 Gene3D G3DSA:3.40.50.720 9 370 4.7E-159 T 14-10-2018 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 8.7E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 PIRSF PIRSF005917 1 288 2.7E-109 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 3.8E-102 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 SUPERFAMILY SSF53790 12 232 5.63E-86 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 Gene3D G3DSA:3.40.1010.10 2 120 2.3E-46 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 Gene3D G3DSA:3.30.950.10 121 241 1.7E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.418 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VAB027_3262 6bdb0c2abf5d188c37c6d88177ddab2e 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 SUPERFAMILY SSF50249 15 101 1.78E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 Gene3D G3DSA:2.40.50.140 4 105 3.6E-19 T 14-10-2018 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 SUPERFAMILY SSF55681 99 464 1.43E-95 T 14-10-2018 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 Gene3D G3DSA:3.30.930.10 109 464 1.3E-109 T 14-10-2018 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.726 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.0E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 6.1E-205 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VAB027_1973 4b046521c3b252c8a50e77b4571d42fb 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 4.4E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1976 85553c6bf1384be252b49e975ac6e06a 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 8.0E-98 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VAB027_1976 85553c6bf1384be252b49e975ac6e06a 453 SUPERFAMILY SSF143548 16 158 2.04E-45 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VAB027_1976 85553c6bf1384be252b49e975ac6e06a 453 Gene3D G3DSA:3.30.1330.90 10 159 2.5E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VAB027_1976 85553c6bf1384be252b49e975ac6e06a 453 Pfam PF03315 Serine dehydratase beta chain 3 155 1.3E-55 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VAB027_1976 85553c6bf1384be252b49e975ac6e06a 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.0E-230 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VAB027_916 67350697f969cee6d3c51451d7d40ed0 158 Gene3D G3DSA:2.60.40.4150 24 154 8.1E-33 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VAB027_916 67350697f969cee6d3c51451d7d40ed0 158 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 13 147 2.4E-38 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VAB027_916 67350697f969cee6d3c51451d7d40ed0 158 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 146 6.7E-46 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VAB027_81 645035b883ac3066b8ff9804b7a5b81f 451 Pfam PF01554 MatE 23 183 1.2E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_81 645035b883ac3066b8ff9804b7a5b81f 451 Pfam PF01554 MatE 249 398 2.1E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_81 645035b883ac3066b8ff9804b7a5b81f 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 417 7.0E-78 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:3.30.420.40 207 376 9.2E-95 T 14-10-2018 VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 SUPERFAMILY SSF46785 11 75 5.65E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 Pfam PF00480 ROK family 86 390 1.0E-74 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:3.30.420.40 90 384 9.2E-95 T 14-10-2018 VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 SUPERFAMILY SSF53067 85 391 3.19E-55 T 14-10-2018 VAB027_1679 4f9dacd0d19dab6e340511cb67511154 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 439 33.524 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 SUPERFAMILY SSF53623 98 300 1.34E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 SUPERFAMILY SSF53244 302 439 4.26E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 437 7.7E-147 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 SUPERFAMILY SSF51984 8 97 6.28E-18 T 14-10-2018 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 Gene3D G3DSA:3.40.50.720 6 96 8.2E-21 T 14-10-2018 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 Gene3D G3DSA:3.90.190.20 303 436 1.1E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 374 1.2E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 Pfam PF08245 Mur ligase middle domain 113 282 4.8E-32 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAB027_3030 50b0501002bd9a754e47e1fe2c405614 440 Gene3D G3DSA:3.40.1190.10 97 302 9.0E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 SMART SM00304 173 225 2.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 9.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 Gene3D G3DSA:3.30.565.10 288 438 1.1E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 SMART SM00388 226 286 3.4E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 SUPERFAMILY SSF55874 289 434 5.63E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 433 5.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 Pfam PF00672 HAMP domain 173 221 4.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 Gene3D G3DSA:1.10.287.130 171 281 7.7E-23 T 14-10-2018 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 SMART SM00387 325 435 2.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 SUPERFAMILY SSF47384 220 281 6.47E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_181 55aa6482675c54e71ddf5a08b57e338b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2938 5e74038455da20cea522c530609d8287 176 PIRSF PIRSF001467 4 174 1.5E-22 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VAB027_2938 5e74038455da20cea522c530609d8287 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 2.1E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2938 5e74038455da20cea522c530609d8287 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 30 45 2.1E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2938 5e74038455da20cea522c530609d8287 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 56 68 2.1E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2938 5e74038455da20cea522c530609d8287 176 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 172 7.1E-42 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2938 5e74038455da20cea522c530609d8287 176 Gene3D G3DSA:2.40.100.10 13 175 6.9E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_2938 5e74038455da20cea522c530609d8287 176 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 51 68 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VAB027_2938 5e74038455da20cea522c530609d8287 176 SUPERFAMILY SSF50891 13 174 5.55E-53 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.3E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 SUPERFAMILY SSF55594 1 82 3.01E-26 T 14-10-2018 IPR035895 HPr-like superfamily VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Gene3D G3DSA:3.30.1340.10 1 85 2.5E-32 T 14-10-2018 IPR035895 HPr-like superfamily VAB027_1655 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 Gene3D G3DSA:3.40.50.150 89 281 6.2E-58 T 14-10-2018 VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 Gene3D G3DSA:1.10.8.10 3 88 2.9E-23 T 14-10-2018 VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 46.549 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 SUPERFAMILY SSF53335 5 280 4.11E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 2.0E-87 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 Pfam PF13847 Methyltransferase domain 116 245 1.7E-17 T 14-10-2018 IPR025714 Methyltransferase domain VAB027_2804 b845c7e40f37d2f849af24dd46f54c42 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 282 2.8E-74 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 SUPERFAMILY SSF53822 60 332 8.78E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 SUPERFAMILY SSF47413 1 59 1.85E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 Gene3D G3DSA:3.40.50.2300 161 323 1.2E-91 T 14-10-2018 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.2E-44 T 14-10-2018 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.1E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 Gene3D G3DSA:1.10.260.40 3 59 2.0E-24 T 14-10-2018 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 64.568 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 SMART SM00354 1 71 1.9E-37 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2366 c99193731e29e7fcc189bd138a9850d4 336 Gene3D G3DSA:3.40.50.2300 69 322 1.2E-91 T 14-10-2018 VAB027_3404 74d61d390d93d9f50a9ee241374810c4 127 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 9.1E-22 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VAB027_3404 74d61d390d93d9f50a9ee241374810c4 127 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 1.9E-21 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VAB027_454 e4195638c0173a58cac5ae6d62aa3022 252 SUPERFAMILY SSF53850 22 248 1.09E-58 T 14-10-2018 VAB027_454 e4195638c0173a58cac5ae6d62aa3022 252 Gene3D G3DSA:3.40.190.10 102 213 1.8E-84 T 14-10-2018 VAB027_454 e4195638c0173a58cac5ae6d62aa3022 252 PIRSF PIRSF004846 1 251 2.6E-65 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VAB027_454 e4195638c0173a58cac5ae6d62aa3022 252 Gene3D G3DSA:3.40.190.10 26 247 1.8E-84 T 14-10-2018 VAB027_454 e4195638c0173a58cac5ae6d62aa3022 252 Pfam PF13531 Bacterial extracellular solute-binding protein 24 248 2.3E-42 T 14-10-2018 VAB027_454 e4195638c0173a58cac5ae6d62aa3022 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 246 2.8E-59 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 SMART SM00020 23 267 1.6E-30 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 SUPERFAMILY SSF50494 3 272 3.5E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 Gene3D G3DSA:2.40.10.10 16 272 1.3E-44 T 14-10-2018 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 2.4E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 2.4E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 2.4E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 Pfam PF00089 Trypsin 24 267 2.4E-32 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAB027_380 d8f94294f474ff12c27ff23e7d2ef468 330 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VAB027_2349 ad24c6832c8fd39a6219bacdde9e25e6 132 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 131 5.7E-48 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VAB027_2349 ad24c6832c8fd39a6219bacdde9e25e6 132 PIRSF PIRSF007010 1 132 2.4E-63 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VAB027_2349 ad24c6832c8fd39a6219bacdde9e25e6 132 Gene3D G3DSA:3.30.300.250 21 132 7.7E-48 T 14-10-2018 VAB027_305 45e1dbba4cfaea0afe75c5e0284ec029 84 SUPERFAMILY SSF89447 1 50 1.46E-13 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily VAB027_305 45e1dbba4cfaea0afe75c5e0284ec029 84 Gene3D G3DSA:2.10.260.10 1 83 1.0E-13 T 14-10-2018 VAB027_305 45e1dbba4cfaea0afe75c5e0284ec029 84 SMART SM00966 6 51 7.7E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 VAB027_305 45e1dbba4cfaea0afe75c5e0284ec029 84 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 48 9.4E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 SUPERFAMILY SSF51735 137 313 1.63E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 7.9E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 Gene3D G3DSA:3.40.50.720 137 318 2.7E-159 T 14-10-2018 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 Gene3D G3DSA:3.40.50.720 3 365 2.7E-159 T 14-10-2018 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.3E-49 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 PIRSF PIRSF000203 1 511 6.5E-271 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 SMART SM01002 146 311 7.6E-81 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 SMART SM01003 4 137 3.9E-74 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 428 511 1.5E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 SUPERFAMILY SSF52283 1 168 5.7E-55 T 14-10-2018 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VAB027_600 140ce334da1d9f685f4c81c9a2e4c489 512 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 512 3.1E-275 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAB027_1191 3e15a11bd437677926b9634d80a8fec3 462 Pfam PF13487 HD domain 129 186 6.5E-10 T 14-10-2018 VAB027_1191 3e15a11bd437677926b9634d80a8fec3 462 Pfam PF13487 HD domain 333 395 9.6E-17 T 14-10-2018 VAB027_1191 3e15a11bd437677926b9634d80a8fec3 462 SUPERFAMILY SSF109604 269 443 6.84E-35 T 14-10-2018 VAB027_1191 3e15a11bd437677926b9634d80a8fec3 462 SMART SM00471 278 413 3.8E-12 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_1191 3e15a11bd437677926b9634d80a8fec3 462 SUPERFAMILY SSF109604 15 229 4.82E-15 T 14-10-2018 VAB027_1191 3e15a11bd437677926b9634d80a8fec3 462 Gene3D G3DSA:1.10.3210.10 262 449 1.6E-57 T 14-10-2018 VAB027_627 854b7fa86a963b0a48dca391b29e0a67 78 Pfam PF02416 mttA/Hcf106 family 4 53 2.9E-11 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VAB027_627 854b7fa86a963b0a48dca391b29e0a67 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.3E-19 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VAB027_627 854b7fa86a963b0a48dca391b29e0a67 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 57 16.996 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VAB027_2527 6698129b30e24232e9d3a32c199d8bbd 228 SMART SM00382 33 221 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2527 6698129b30e24232e9d3a32c199d8bbd 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.0E-109 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VAB027_2527 6698129b30e24232e9d3a32c199d8bbd 228 Gene3D G3DSA:3.40.50.300 1 227 2.3E-65 T 14-10-2018 VAB027_2527 6698129b30e24232e9d3a32c199d8bbd 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2527 6698129b30e24232e9d3a32c199d8bbd 228 SUPERFAMILY SSF52540 4 225 3.25E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2527 6698129b30e24232e9d3a32c199d8bbd 228 Pfam PF00005 ABC transporter 24 172 5.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2948 ca20f7a2ef0d0b2389483b08957a10d3 271 Gene3D G3DSA:3.40.50.720 5 271 2.0E-107 T 14-10-2018 VAB027_2948 ca20f7a2ef0d0b2389483b08957a10d3 271 SUPERFAMILY SSF69572 9 268 2.49E-64 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAB027_2948 ca20f7a2ef0d0b2389483b08957a10d3 271 Pfam PF00899 ThiF family 26 267 2.9E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 SUPERFAMILY SSF52374 4 387 9.06E-101 T 14-10-2018 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Pfam PF09334 tRNA synthetases class I (M) 9 396 3.9E-164 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Pfam PF01588 Putative tRNA binding domain 588 680 1.0E-24 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Gene3D G3DSA:2.40.50.140 573 683 1.7E-34 T 14-10-2018 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Gene3D G3DSA:2.20.28.20 142 176 9.7E-161 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 SUPERFAMILY SSF47323 389 546 2.06E-45 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Gene3D G3DSA:3.40.50.620 9 384 9.7E-161 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Gene3D G3DSA:1.10.730.10 389 526 1.4E-34 T 14-10-2018 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 8.7E-200 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 SUPERFAMILY SSF50249 578 682 2.01E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1717 1252f5182af779c7cf46cca66828f367 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 SUPERFAMILY SSF57770 142 176 5.89E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 682 2.1E-47 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAB027_1717 1252f5182af779c7cf46cca66828f367 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.436 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_3330 049fe1f7d8fb5dbfe2e5c92e3a422418 147 Gene3D G3DSA:1.10.10.410 91 147 6.7E-19 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VAB027_3330 049fe1f7d8fb5dbfe2e5c92e3a422418 147 Pfam PF09424 Yqey-like protein 5 146 3.3E-57 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VAB027_3330 049fe1f7d8fb5dbfe2e5c92e3a422418 147 SUPERFAMILY SSF89095 1 146 6.8E-44 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VAB027_3330 049fe1f7d8fb5dbfe2e5c92e3a422418 147 Gene3D G3DSA:1.10.1510.10 1 90 9.9E-29 T 14-10-2018 VAB027_2448 ae4b5c10d630b2043c8f371c6812f811 278 Gene3D G3DSA:1.10.10.10 1 81 4.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2448 ae4b5c10d630b2043c8f371c6812f811 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 81 2.5E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VAB027_2448 ae4b5c10d630b2043c8f371c6812f811 278 Gene3D G3DSA:3.40.50.10490 91 278 1.4E-45 T 14-10-2018 VAB027_2448 ae4b5c10d630b2043c8f371c6812f811 278 SUPERFAMILY SSF46689 5 80 2.15E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2448 ae4b5c10d630b2043c8f371c6812f811 278 SUPERFAMILY SSF53697 103 265 4.13E-31 T 14-10-2018 VAB027_2448 ae4b5c10d630b2043c8f371c6812f811 278 Pfam PF01380 SIS domain 128 251 5.4E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Pfam PF01103 Surface antigen 448 803 3.8E-89 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Gene3D G3DSA:3.10.20.310 348 425 5.2E-25 T 14-10-2018 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Gene3D G3DSA:3.10.20.310 264 346 3.6E-12 T 14-10-2018 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 803 2.6E-281 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Gene3D G3DSA:2.40.160.50 426 803 3.9E-120 T 14-10-2018 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Gene3D G3DSA:3.10.20.310 18 91 8.8E-20 T 14-10-2018 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Pfam PF07244 Surface antigen variable number repeat 266 344 1.2E-9 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Pfam PF07244 Surface antigen variable number repeat 347 420 1.2E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Pfam PF07244 Surface antigen variable number repeat 92 172 2.2E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Pfam PF07244 Surface antigen variable number repeat 176 263 6.8E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Gene3D G3DSA:3.10.20.310 175 263 6.1E-23 T 14-10-2018 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 803 25.741 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 PIRSF PIRSF006076 1 803 7.2E-244 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VAB027_2893 b1377fbd66fadc30f76032f5001d7ee4 803 Gene3D G3DSA:3.10.20.310 92 174 6.7E-17 T 14-10-2018 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Gene3D G3DSA:3.40.1190.10 91 313 7.6E-59 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 SUPERFAMILY SSF53623 96 306 2.62E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Gene3D G3DSA:3.90.190.20 314 450 3.0E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Gene3D G3DSA:3.40.50.720 1 90 1.1E-36 T 14-10-2018 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 SUPERFAMILY SSF51984 1 89 5.89E-24 T 14-10-2018 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 SUPERFAMILY SSF53244 311 448 7.33E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 8.1E-276 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 361 6.5E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.8E-20 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Pfam PF08245 Mur ligase middle domain 108 291 7.3E-24 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAB027_1325 01ad2cd7840eba1528e0438c56731c5b 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.299 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VAB027_3612 151381fe8165ae51861fb00b42cafaaf 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 5.4E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3612 151381fe8165ae51861fb00b42cafaaf 186 SUPERFAMILY SSF51161 66 175 1.26E-25 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_3612 151381fe8165ae51861fb00b42cafaaf 186 Gene3D G3DSA:2.160.10.10 5 185 2.1E-46 T 14-10-2018 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 SUPERFAMILY SSF54675 13 128 6.28E-32 T 14-10-2018 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 Gene3D G3DSA:3.90.1170.20 20 293 4.5E-128 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 28 294 2.0E-93 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 SUPERFAMILY SSF51690 130 294 1.1E-60 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 2.9E-25 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 PIRSF PIRSF006250 16 296 1.5E-99 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 9.7E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VAB027_3048 c2908de1af9f24491fd0f180e73d3c21 296 Gene3D G3DSA:3.20.20.70 138 284 4.5E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 104 209 1.0E-26 T 14-10-2018 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF14842 FliG N-terminal domain 21 121 3.5E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 264 284 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 5.3E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF01706 FliG C-terminal domain 234 340 1.3E-41 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 SUPERFAMILY SSF48029 18 134 8.37E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 17 102 3.2E-17 T 14-10-2018 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF14841 FliG middle domain 131 203 1.4E-23 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 SUPERFAMILY SSF48029 130 341 1.83E-66 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 211 348 1.4E-43 T 14-10-2018 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 346 5.4E-94 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_2764 6e7a9326044edb75cb6bb1bce716eba4 348 PIRSF PIRSF003161 16 348 1.8E-110 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAB027_817 f3ec9a30b928c20a87ec2ab60bc2a711 316 Gene3D G3DSA:1.10.3470.10 3 315 1.9E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_817 f3ec9a30b928c20a87ec2ab60bc2a711 316 Pfam PF01032 FecCD transport family 9 312 8.1E-53 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_817 f3ec9a30b928c20a87ec2ab60bc2a711 316 SUPERFAMILY SSF81345 6 313 9.15E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_889 7d17dfd4d1d123b6ab12453724fd7de9 335 Gene3D G3DSA:3.40.190.10 119 262 1.0E-87 T 14-10-2018 VAB027_889 7d17dfd4d1d123b6ab12453724fd7de9 335 Gene3D G3DSA:3.40.190.10 33 325 1.0E-87 T 14-10-2018 VAB027_889 7d17dfd4d1d123b6ab12453724fd7de9 335 Pfam PF16868 NMT1-like family 33 325 8.2E-107 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VAB027_889 7d17dfd4d1d123b6ab12453724fd7de9 335 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 325 1.4E-99 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VAB027_889 7d17dfd4d1d123b6ab12453724fd7de9 335 SUPERFAMILY SSF53850 31 326 3.77E-66 T 14-10-2018 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SUPERFAMILY SSF47794 349 414 1.73E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SUPERFAMILY SSF69705 1 126 1.28E-39 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Pfam PF08529 NusA N-terminal domain 4 123 1.2E-34 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.8E-125 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SMART SM00316 133 198 1.6E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Gene3D G3DSA:1.10.150.20 431 490 5.5E-24 T 14-10-2018 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Gene3D G3DSA:3.30.300.20 278 344 2.6E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Gene3D G3DSA:3.30.300.20 199 277 5.6E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Gene3D G3DSA:1.10.150.20 352 421 4.1E-28 T 14-10-2018 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SUPERFAMILY SSF50249 132 199 9.43E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.792 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.2E-7 T 14-10-2018 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.3E-21 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 1.6E-17 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Pfam PF13184 NusA-like KH domain 230 297 3.6E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SUPERFAMILY SSF54814 201 278 1.9E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SMART SM00322 230 293 34.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SMART SM00322 301 375 0.032 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Gene3D G3DSA:2.40.50.140 135 198 1.1E-17 T 14-10-2018 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SUPERFAMILY SSF47794 429 492 6.28E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 SUPERFAMILY SSF54814 279 342 2.88E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAB027_3204 e1b05e2cc4f4416590d50c1573430c20 495 Gene3D G3DSA:3.30.1480.10 1 129 9.1E-44 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VAB027_1494 57f10fb9ba60fde6d0dfcb28f693b3ff 554 PIRSF PIRSF003128 1 554 4.1E-164 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VAB027_1494 57f10fb9ba60fde6d0dfcb28f693b3ff 554 SUPERFAMILY SSF52540 1 509 4.17E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1494 57f10fb9ba60fde6d0dfcb28f693b3ff 554 Pfam PF13476 AAA domain 5 211 2.1E-17 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VAB027_1494 57f10fb9ba60fde6d0dfcb28f693b3ff 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.6E-175 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VAB027_1494 57f10fb9ba60fde6d0dfcb28f693b3ff 554 Gene3D G3DSA:3.40.50.300 274 553 1.1E-50 T 14-10-2018 VAB027_1494 57f10fb9ba60fde6d0dfcb28f693b3ff 554 Gene3D G3DSA:3.40.50.300 1 273 8.9E-50 T 14-10-2018 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 Gene3D G3DSA:1.25.40.10 443 807 5.5E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 Gene3D G3DSA:3.40.50.300 8 167 3.4E-6 T 14-10-2018 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 SUPERFAMILY SSF48452 443 805 5.26E-158 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 Gene3D G3DSA:1.10.10.10 808 898 3.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.7E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.7E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.7E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 SUPERFAMILY SSF46894 831 895 9.52E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 SUPERFAMILY SSF52540 15 228 1.05E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 SMART SM00421 836 893 1.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 2.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1009 736b442dfc8d39e3dc86bf28f035a076 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.57 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT VAB027_370 552f481ce542d52ad5a3fff59e180ae0 309 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VAB027_370 552f481ce542d52ad5a3fff59e180ae0 309 Pfam PF00491 Arginase family 33 297 1.0E-88 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_370 552f481ce542d52ad5a3fff59e180ae0 309 PIRSF PIRSF036979 11 305 6.6E-97 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_370 552f481ce542d52ad5a3fff59e180ae0 309 Gene3D G3DSA:3.40.800.10 1 309 3.7E-105 T 14-10-2018 VAB027_370 552f481ce542d52ad5a3fff59e180ae0 309 SUPERFAMILY SSF52768 12 303 6.12E-95 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VAB027_370 552f481ce542d52ad5a3fff59e180ae0 309 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 1.5E-92 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Gene3D G3DSA:1.10.340.30 310 410 8.0E-16 T 14-10-2018 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SUPERFAMILY SSF46689 141 190 5.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 140 182 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Pfam PF02805 Metal binding domain of Ada 12 75 4.3E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SMART SM00342 103 186 8.4E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SUPERFAMILY SSF46689 92 136 3.99E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SUPERFAMILY SSF48150 299 450 6.28E-25 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SMART SM01009 197 309 8.9E-48 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Gene3D G3DSA:3.30.310.20 198 309 2.1E-29 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Gene3D G3DSA:3.40.10.10 4 77 3.8E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SUPERFAMILY SSF57884 1 90 8.63E-34 T 14-10-2018 IPR035451 Ada-like domain superfamily VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Gene3D G3DSA:1.10.10.60 89 197 5.1E-24 T 14-10-2018 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Pfam PF12833 Helix-turn-helix domain 109 187 2.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 Pfam PF06029 AlkA N-terminal domain 198 309 2.6E-37 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VAB027_1112 e5b3b55f2d9cc1ddbc528bc9a65731e4 452 SUPERFAMILY SSF55945 198 292 1.57E-29 T 14-10-2018 VAB027_609 028b06b13625fdf66925a12f75165e2e 410 Gene3D G3DSA:1.20.1250.20 3 401 1.4E-57 T 14-10-2018 VAB027_609 028b06b13625fdf66925a12f75165e2e 410 Pfam PF07690 Major Facilitator Superfamily 15 295 2.5E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_609 028b06b13625fdf66925a12f75165e2e 410 SUPERFAMILY SSF103473 9 398 4.05E-57 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 Gene3D G3DSA:3.40.50.720 1 166 1.9E-50 T 14-10-2018 VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 4.0E-39 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 SUPERFAMILY SSF48179 168 290 1.63E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 2.2E-29 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 SUPERFAMILY SSF51735 1 165 4.6E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 2.7E-93 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VAB027_2944 71e5877f33fb07bac1ed41dc27369bb2 296 Gene3D G3DSA:1.10.1040.10 167 296 3.1E-45 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAB027_1511 6bb3af543609ab4c9eb82922b9ce4443 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 26.875 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VAB027_1511 6bb3af543609ab4c9eb82922b9ce4443 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 4.0E-15 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VAB027_1511 6bb3af543609ab4c9eb82922b9ce4443 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 6.9E-34 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 SUPERFAMILY SSF55811 2 127 4.6E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 Pfam PF00293 NUDIX domain 6 126 2.3E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 Gene3D G3DSA:3.90.79.10 1 132 2.4E-43 T 14-10-2018 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 4.8E-40 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.4E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_3020 d81ce9500fd2eee8253ed1275ea39887 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.4E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 SUPERFAMILY SSF51735 315 495 2.37E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 495 1.7E-53 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 SUPERFAMILY SSF48179 615 707 1.7E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Gene3D G3DSA:3.90.226.10 2 305 3.3E-95 T 14-10-2018 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 SUPERFAMILY SSF48179 497 606 3.49E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Gene3D G3DSA:1.10.1040.50 500 701 5.6E-72 T 14-10-2018 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 519 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 SUPERFAMILY SSF52096 3 305 1.79E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 590 6.3E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 694 8.0E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Gene3D G3DSA:3.40.50.720 306 499 1.3E-57 T 14-10-2018 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 214 9.9E-38 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 707 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_1728 9a5839ac964452174ad375d9bda4fc5f 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 707 51.943 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_1429 41878acf264801237015ffd9614c996f 393 SUPERFAMILY SSF56322 18 385 4.45E-90 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1429 41878acf264801237015ffd9614c996f 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 100 382 1.1E-83 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VAB027_1429 41878acf264801237015ffd9614c996f 393 Gene3D G3DSA:3.60.120.10 3 390 4.5E-118 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1429 41878acf264801237015ffd9614c996f 393 Pfam PF00425 chorismate binding enzyme 121 375 2.6E-70 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 3.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 3.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 3.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 7.1E-25 T 14-10-2018 VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 Gene3D G3DSA:3.40.50.1000 9 191 8.9E-41 T 14-10-2018 IPR023214 HAD superfamily VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 SUPERFAMILY SSF56784 6 218 3.86E-41 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 Gene3D G3DSA:1.10.150.240 21 88 8.9E-41 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_385 081c0bfa8be2abda925b8d8ed26147a3 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 185 9.6E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 180 714 3.1E-158 T 14-10-2018 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 SUPERFAMILY SSF53955 171 369 1.1E-68 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 PIRSF PIRSF002799 2 777 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 Pfam PF00905 Penicillin binding protein transpeptidase domain 439 677 2.6E-21 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 35 758 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 Pfam PF14814 Bifunctional transglycosylase second domain 80 164 6.7E-27 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 Gene3D G3DSA:3.40.710.10 70 727 1.8E-266 T 14-10-2018 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 Gene3D G3DSA:3.30.2060.10 78 167 1.8E-266 T 14-10-2018 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 Pfam PF00912 Transglycosylase 176 347 2.2E-58 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 Gene3D G3DSA:1.10.3810.10 168 371 1.8E-266 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3246 fd721a18cd14cfc543f22d94098199cf 777 SUPERFAMILY SSF56601 329 771 8.08E-112 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 6.4E-71 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF00467 KOW motif 131 162 3.0E-7 T 14-10-2018 IPR005824 KOW VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.173 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00738 6 115 1.0E-50 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00739 127 154 3.2E-5 T 14-10-2018 IPR005824 KOW VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:2.30.30.30 123 181 3.4E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAB027_3519 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF50104 125 181 7.07E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAB027_589 9662cbb79554423acc716a9fa26fbc02 191 Gene3D G3DSA:3.30.70.1070 88 182 2.4E-22 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_589 9662cbb79554423acc716a9fa26fbc02 191 Pfam PF05036 Sporulation related domain 100 174 7.6E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAB027_589 9662cbb79554423acc716a9fa26fbc02 191 SUPERFAMILY SSF110997 99 162 3.14E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 Gene3D G3DSA:3.40.50.2000 5 474 2.9E-193 T 14-10-2018 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 SUPERFAMILY SSF53756 8 815 0.0 T 14-10-2018 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 PIRSF PIRSF000460 1 817 1.3E-214 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 Gene3D G3DSA:3.40.50.2000 475 797 5.5E-144 T 14-10-2018 VAB027_1008 963f1f9c3b2222b3408468a383206273 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 Gene3D G3DSA:3.10.290.10 1 61 3.6E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 Gene3D G3DSA:3.30.70.580 62 226 2.9E-60 T 14-10-2018 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 SMART SM00363 1 59 1.6E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 SUPERFAMILY SSF55174 1 79 5.15E-12 T 14-10-2018 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 Pfam PF00849 RNA pseudouridylate synthase 61 191 3.3E-18 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 Pfam PF01479 S4 domain 1 43 7.5E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 223 5.5E-50 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 Gene3D G3DSA:3.30.70.1560 127 208 2.9E-60 T 14-10-2018 VAB027_2282 5c901745ad693913d305c09d9b84c576 231 SUPERFAMILY SSF55120 60 226 4.64E-48 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1724 2a06948be65f096274d8f21d35313765 428 Gene3D G3DSA:2.40.160.60 26 428 3.4E-111 T 14-10-2018 VAB027_1724 2a06948be65f096274d8f21d35313765 428 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 428 6.8E-138 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAB027_1724 2a06948be65f096274d8f21d35313765 428 SUPERFAMILY SSF56935 26 428 2.79E-88 T 14-10-2018 VAB027_3432 b126eb97edc0a5c232e1182a96734a38 479 PIRSF PIRSF028153 1 479 7.3E-229 T 14-10-2018 IPR016871 MSHA biogenesis protein, MshI VAB027_3432 b126eb97edc0a5c232e1182a96734a38 479 SUPERFAMILY SSF53067 40 154 8.03E-15 T 14-10-2018 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52467 186 353 7.48E-34 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.970 363 556 2.5E-55 T 14-10-2018 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52518 8 178 4.63E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52518 367 556 4.37E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 4.0E-39 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 7.2E-48 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 2.6E-25 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.1220 187 357 2.2E-34 T 14-10-2018 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.970 2 185 3.2E-62 T 14-10-2018 VAB027_2235 15dc7fe370e777ddbdc15f5569cad08a 567 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 548 9.1E-279 T 14-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAB027_3559 88f2c0b692a074032d8e3efd8b891434 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 9.8E-64 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VAB027_3559 88f2c0b692a074032d8e3efd8b891434 171 Pfam PF01202 Shikimate kinase 13 129 8.7E-14 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAB027_3559 88f2c0b692a074032d8e3efd8b891434 171 Gene3D G3DSA:3.40.50.300 2 169 2.4E-66 T 14-10-2018 VAB027_3559 88f2c0b692a074032d8e3efd8b891434 171 SUPERFAMILY SSF52540 4 168 3.22E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SUPERFAMILY SSF47384 366 434 1.06E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Gene3D G3DSA:3.30.565.10 434 620 3.0E-58 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SUPERFAMILY SSF47226 2 116 2.36E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Gene3D G3DSA:2.30.30.40 621 748 1.3E-28 T 14-10-2018 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 620 1.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 3.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 3.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 3.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 3.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Gene3D G3DSA:1.20.120.160 1 130 4.0E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SMART SM01231 365 433 1.6E-13 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 366 432 2.6E-14 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SMART SM00073 1 95 4.0E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SMART SM00260 613 753 2.0E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SUPERFAMILY SSF55874 435 619 2.88E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Pfam PF01584 CheW-like domain 626 755 5.7E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Pfam PF01627 Hpt domain 2 94 3.9E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Gene3D G3DSA:2.40.50.180 644 708 1.3E-28 T 14-10-2018 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SUPERFAMILY SSF50341 620 752 2.62E-27 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 SMART SM00387 478 621 4.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2072 74a8beeda7d856c82cd96ca26ec0f0de 757 Gene3D G3DSA:1.10.287.560 366 433 1.8E-11 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VAB027_3365 9be2d4dbc8d23e2468026d39f07484c6 96 Gene3D G3DSA:3.30.1200.10 1 96 1.2E-33 T 14-10-2018 IPR036591 YggU-like superfamily VAB027_3365 9be2d4dbc8d23e2468026d39f07484c6 96 SUPERFAMILY SSF69786 3 95 6.28E-32 T 14-10-2018 IPR036591 YggU-like superfamily VAB027_3365 9be2d4dbc8d23e2468026d39f07484c6 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 19.75 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VAB027_3365 9be2d4dbc8d23e2468026d39f07484c6 96 SMART SM01152 7 83 5.8E-37 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VAB027_3365 9be2d4dbc8d23e2468026d39f07484c6 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 2.9E-24 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VAB027_3365 9be2d4dbc8d23e2468026d39f07484c6 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 91 8.2E-26 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VAB027_776 5d3f5e13840c9cf8cc123a6652763c11 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.6E-50 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VAB027_776 5d3f5e13840c9cf8cc123a6652763c11 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 46 75 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAB027_776 5d3f5e13840c9cf8cc123a6652763c11 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 42.347 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VAB027_776 5d3f5e13840c9cf8cc123a6652763c11 126 Pfam PF01597 Glycine cleavage H-protein 5 125 9.3E-49 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VAB027_776 5d3f5e13840c9cf8cc123a6652763c11 126 SUPERFAMILY SSF51230 3 125 1.65E-44 T 14-10-2018 IPR011053 Single hybrid motif VAB027_776 5d3f5e13840c9cf8cc123a6652763c11 126 Gene3D G3DSA:2.40.50.100 1 126 2.5E-49 T 14-10-2018 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 Gene3D G3DSA:3.30.565.10 234 388 1.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 SUPERFAMILY SSF55874 228 393 1.83E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 SUPERFAMILY SSF52172 541 659 8.97E-35 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 387 5.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 SMART SM00448 542 656 1.7E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 Gene3D G3DSA:1.10.287.130 146 233 6.9E-6 T 14-10-2018 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 Gene3D G3DSA:3.40.50.2300 530 660 6.1E-36 T 14-10-2018 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 SMART SM00387 283 390 9.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 SUPERFAMILY SSF47384 153 200 2.35E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 3.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_637 9cc93133cf26f6afd3d3c01ae110875e 660 Pfam PF00072 Response regulator receiver domain 544 656 3.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 Gene3D G3DSA:3.30.70.20 2 107 8.5E-27 T 14-10-2018 VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.5E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.5E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.5E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 4.4E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 9.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_1456 72f77673704fee2297de4ec5d4dee487 107 SUPERFAMILY SSF54862 3 100 4.61E-23 T 14-10-2018 VAB027_1118 031af39d5e7b91cbbe28698731648199 205 Gene3D G3DSA:3.40.30.10 109 185 2.4E-19 T 14-10-2018 VAB027_1118 031af39d5e7b91cbbe28698731648199 205 PRINTS PR00160 Glutaredoxin signature 108 126 2.9E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_1118 031af39d5e7b91cbbe28698731648199 205 PRINTS PR00160 Glutaredoxin signature 171 184 2.9E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_1118 031af39d5e7b91cbbe28698731648199 205 PRINTS PR00160 Glutaredoxin signature 157 170 2.9E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_1118 031af39d5e7b91cbbe28698731648199 205 Pfam PF00462 Glutaredoxin 109 174 6.8E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAB027_1118 031af39d5e7b91cbbe28698731648199 205 SUPERFAMILY SSF52833 109 187 4.79E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1118 031af39d5e7b91cbbe28698731648199 205 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1272 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VAB027_175 7b038f998d1c9b2a1ce04146ac1fc9cd 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 3.9E-118 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VAB027_175 7b038f998d1c9b2a1ce04146ac1fc9cd 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 45.205 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VAB027_175 7b038f998d1c9b2a1ce04146ac1fc9cd 255 Gene3D G3DSA:3.40.50.1820 2 253 2.7E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_175 7b038f998d1c9b2a1ce04146ac1fc9cd 255 SUPERFAMILY SSF53474 5 252 6.73E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_175 7b038f998d1c9b2a1ce04146ac1fc9cd 255 Pfam PF00561 alpha/beta hydrolase fold 16 241 2.2E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 PRINTS PR00095 Anthranilate synthase component I signature 390 404 2.3E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 PRINTS PR00095 Anthranilate synthase component I signature 296 309 2.3E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 PRINTS PR00095 Anthranilate synthase component I signature 310 323 2.3E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 PRINTS PR00095 Anthranilate synthase component I signature 405 419 2.3E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 Gene3D G3DSA:3.60.120.10 5 458 9.0E-171 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 Pfam PF00425 chorismate binding enzyme 196 448 4.2E-95 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAB027_1979 477950d022e9dafdee94458afea03ea0 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 156 6.1E-29 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 SUPERFAMILY SSF56322 8 457 2.75E-144 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1979 477950d022e9dafdee94458afea03ea0 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 450 2.0E-122 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VAB027_3397 ca8af792fc613e2980ff9ea5ebbbb7ab 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAB027_3397 ca8af792fc613e2980ff9ea5ebbbb7ab 323 Gene3D G3DSA:1.10.600.10 1 323 9.6E-121 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAB027_3397 ca8af792fc613e2980ff9ea5ebbbb7ab 323 Pfam PF00348 Polyprenyl synthetase 32 273 3.8E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VAB027_3397 ca8af792fc613e2980ff9ea5ebbbb7ab 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAB027_3397 ca8af792fc613e2980ff9ea5ebbbb7ab 323 SUPERFAMILY SSF48576 4 322 2.72E-101 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Gene3D G3DSA:3.60.20.10 2 241 3.7E-79 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.1E-260 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 SUPERFAMILY SSF53697 245 610 9.0E-112 T 14-10-2018 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 SUPERFAMILY SSF56235 2 234 5.83E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Pfam PF01380 SIS domain 463 592 8.6E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Gene3D G3DSA:3.40.50.10490 249 609 3.5E-145 T 14-10-2018 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Gene3D G3DSA:3.40.50.10490 448 595 3.5E-145 T 14-10-2018 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Pfam PF13522 Glutamine amidotransferase domain 63 174 5.5E-20 T 14-10-2018 VAB027_3336 7f8ed4754897bff766623ed53d8d87c3 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.422 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 301 4.6E-43 T 14-10-2018 IPR000160 GGDEF domain VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 140 3.2E-8 T 14-10-2018 IPR000014 PAS domain VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 SMART SM00091 17 83 4.7E-4 T 14-10-2018 IPR000014 PAS domain VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 SUPERFAMILY SSF55073 149 304 6.43E-45 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 Pfam PF08448 PAS fold 23 132 1.6E-14 T 14-10-2018 IPR013656 PAS fold-4 VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 299 4.0E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 SUPERFAMILY SSF55785 23 134 1.15E-16 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 Gene3D G3DSA:3.30.450.20 7 140 2.2E-16 T 14-10-2018 VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 Gene3D G3DSA:3.30.70.270 141 307 1.3E-51 T 14-10-2018 VAB027_1184 09325ce9e90dee30ecb4595f176d791f 308 SMART SM00267 133 303 1.7E-52 T 14-10-2018 IPR000160 GGDEF domain VAB027_1661 c085949dde3ca16998df598cc54fafd3 269 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 224 2.7E-43 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAB027_1661 c085949dde3ca16998df598cc54fafd3 269 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 227 21.603 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAB027_399 82a21d938e21913381038ca36dc8abcd 309 SMART SM00797 26 306 5.9E-139 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VAB027_399 82a21d938e21913381038ca36dc8abcd 309 SUPERFAMILY SSF50891 188 292 2.31E-11 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_399 82a21d938e21913381038ca36dc8abcd 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 290 1.3E-84 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VAB027_399 82a21d938e21913381038ca36dc8abcd 309 Gene3D G3DSA:2.40.100.10 180 307 9.5E-43 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_399 82a21d938e21913381038ca36dc8abcd 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 289 3.7E-85 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 Gene3D G3DSA:2.30.42.10 265 361 2.3E-28 T 14-10-2018 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 SMART SM00228 267 349 1.4E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 SMART SM00228 374 447 2.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 7.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 7.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 7.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 7.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 7.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 7.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 SUPERFAMILY SSF50494 12 275 8.63E-65 T 14-10-2018 IPR009003 Peptidase S1, PA clan VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 372 443 2.6E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 Gene3D G3DSA:2.40.10.120 37 261 8.8E-85 T 14-10-2018 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 SUPERFAMILY SSF50156 249 358 1.18E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 Pfam PF13180 PDZ domain 269 358 5.9E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 Gene3D G3DSA:2.30.42.10 362 455 4.7E-27 T 14-10-2018 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 SUPERFAMILY SSF50156 382 454 4.21E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 6.4E-168 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VAB027_3276 3a80bc59fbac69834551227f4b6fac05 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.1E-31 T 14-10-2018 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 3 380 42.092 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 Gene3D G3DSA:3.40.50.720 3 207 9.5E-77 T 14-10-2018 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 4 125 2.5E-23 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 Gene3D G3DSA:1.10.1040.10 209 384 1.5E-66 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 SUPERFAMILY SSF51735 2 204 1.48E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1088 9122649d587492c917924cde4e2b17ed 384 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 8.6E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 8.6E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 PRINTS PR00084 Mannitol dehydrogenase signature 172 187 8.6E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 PRINTS PR00084 Mannitol dehydrogenase signature 5 15 8.6E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 SUPERFAMILY SSF48179 206 383 5.44E-45 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_1088 9122649d587492c917924cde4e2b17ed 384 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 371 5.9E-59 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 Pfam PF00920 Dehydratase family 67 594 2.4E-148 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 SUPERFAMILY SSF52016 418 596 5.73E-52 T 14-10-2018 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 SUPERFAMILY SSF143975 2 417 7.72E-131 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 3.2E-247 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.715 T 14-10-2018 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 Gene3D G3DSA:3.50.30.80 418 564 3.0E-47 T 14-10-2018 VAB027_3558 c1d368f5356407f9b1b5056cef6f2ff4 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_412 0f4d9df054e94a881c6d69cf00206fdf 171 SUPERFAMILY SSF55811 2 168 5.55E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_412 0f4d9df054e94a881c6d69cf00206fdf 171 Pfam PF00293 NUDIX domain 33 145 2.2E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_412 0f4d9df054e94a881c6d69cf00206fdf 171 Gene3D G3DSA:3.90.79.10 1 167 1.7E-48 T 14-10-2018 VAB027_412 0f4d9df054e94a881c6d69cf00206fdf 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 Pfam PF01494 FAD binding domain 15 352 1.5E-23 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 Gene3D G3DSA:3.50.50.60 16 346 4.0E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 Gene3D G3DSA:3.30.9.50 92 281 4.0E-95 T 14-10-2018 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 SUPERFAMILY SSF51905 15 392 1.97E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 16 398 3.0E-162 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 16 397 6.2E-123 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 2.3E-10 T 14-10-2018 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 168 183 2.3E-10 T 14-10-2018 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 2.3E-10 T 14-10-2018 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 2.3E-10 T 14-10-2018 VAB027_3100 bd07c263aa9d407088c79f4050deb1f0 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 306 319 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 Pfam PF01479 S4 domain 4 36 8.2E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.30.70.580 70 228 3.9E-49 T 14-10-2018 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 SUPERFAMILY SSF55120 68 236 3.06E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 SMART SM00363 3 73 4.6E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 SUPERFAMILY SSF55174 4 96 3.36E-12 T 14-10-2018 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 Pfam PF00849 RNA pseudouridylate synthase 68 154 5.0E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 1.8E-56 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.10.290.10 1 60 7.0E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_1858 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.30.70.1560 130 220 3.9E-49 T 14-10-2018 VAB027_863 a8915381e786e18d3033184892442a11 318 PIRSF PIRSF002849 1 318 2.2E-128 T 14-10-2018 VAB027_863 a8915381e786e18d3033184892442a11 318 SUPERFAMILY SSF52540 6 290 9.28E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_863 a8915381e786e18d3033184892442a11 318 Gene3D G3DSA:1.10.8.300 199 315 1.2E-37 T 14-10-2018 VAB027_863 a8915381e786e18d3033184892442a11 318 Gene3D G3DSA:3.40.50.300 17 183 5.9E-47 T 14-10-2018 VAB027_863 a8915381e786e18d3033184892442a11 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 4.7E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 Gene3D G3DSA:3.40.50.300 2 258 7.1E-55 T 14-10-2018 VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 SMART SM00382 29 221 8.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 SMART SM00382 288 460 7.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 SUPERFAMILY SSF52540 4 243 1.52E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 Pfam PF00005 ABC transporter 280 415 5.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 Pfam PF00005 ABC transporter 21 173 1.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 SUPERFAMILY SSF52540 253 459 1.55E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 ProSitePatterns PS00211 ABC transporters family signature. 387 401 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1031 a75c44280c1bc91c40e85d1a4a8a5577 460 Gene3D G3DSA:3.40.50.300 259 460 2.5E-44 T 14-10-2018 VAB027_1999 10d51716aeb246542946229b271931ab 160 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 90 3.6E-9 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VAB027_1999 10d51716aeb246542946229b271931ab 160 Gene3D G3DSA:3.30.420.130 1 105 1.2E-11 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VAB027_1999 10d51716aeb246542946229b271931ab 160 SUPERFAMILY SSF53146 1 97 2.75E-18 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VAB027_2297 e24acc122d827986933e1d2f297e946a 821 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 617 688 2.1E-7 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VAB027_2297 e24acc122d827986933e1d2f297e946a 821 Pfam PF01752 Collagenase 272 558 5.7E-111 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 5.2E-30 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 5.2E-30 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 5.2E-30 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 5.2E-30 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 5.2E-30 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 Gene3D G3DSA:2.60.120.380 723 819 8.8E-6 T 14-10-2018 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 Gene3D G3DSA:2.60.120.380 599 701 7.0E-11 T 14-10-2018 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 Gene3D G3DSA:1.10.1740.190 303 450 8.4E-33 T 14-10-2018 VAB027_2297 e24acc122d827986933e1d2f297e946a 821 Pfam PF08453 Peptidase family M9 N-terminal 31 210 2.5E-50 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 Gene3D G3DSA:3.40.1280.10 74 243 4.5E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 Pfam PF04452 RNA methyltransferase 19 236 4.8E-73 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.2E-84 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 SUPERFAMILY SSF88697 2 70 5.72E-17 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 PIRSF PIRSF015601 2 242 7.0E-55 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 SUPERFAMILY SSF75217 75 242 6.11E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_3354 eec5dfa5c061f4beba8c1a7c1a667d28 243 Gene3D G3DSA:2.40.240.20 1 71 8.9E-22 T 14-10-2018 VAB027_1723 6e403ecb2aeeae47eafa2c401c2cda09 423 Gene3D G3DSA:2.40.160.60 26 423 9.0E-118 T 14-10-2018 VAB027_1723 6e403ecb2aeeae47eafa2c401c2cda09 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 423 1.0E-139 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAB027_1723 6e403ecb2aeeae47eafa2c401c2cda09 423 SUPERFAMILY SSF56935 26 423 9.16E-97 T 14-10-2018 VAB027_2262 c9957b155ad2fc06b706bd68e56f0d61 362 SUPERFAMILY SSF53335 85 350 2.38E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2262 c9957b155ad2fc06b706bd68e56f0d61 362 PIRSF PIRSF029038 35 362 3.8E-158 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VAB027_2262 c9957b155ad2fc06b706bd68e56f0d61 362 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 46 352 54.908 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VAB027_2262 c9957b155ad2fc06b706bd68e56f0d61 362 Pfam PF05971 Protein of unknown function (DUF890) 44 350 1.2E-156 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VAB027_2262 c9957b155ad2fc06b706bd68e56f0d61 362 Gene3D G3DSA:3.40.50.150 79 350 2.7E-74 T 14-10-2018 VAB027_1562 d6f7eb408d17a0a488705f25461bbd0e 204 Pfam PF11363 Protein of unknown function (DUF3164) 10 203 2.6E-83 T 14-10-2018 IPR021505 Bacteriophage B3, Orf6 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 Gene3D G3DSA:3.40.720.10 6 507 8.4E-214 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 SUPERFAMILY SSF64158 78 308 4.84E-82 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 Gene3D G3DSA:3.40.1450.10 78 310 8.4E-214 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 SUPERFAMILY SSF53649 5 509 1.01E-78 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 5.5E-229 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 PIRSF PIRSF001492 1 510 2.5E-204 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.577 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 Pfam PF01676 Metalloenzyme superfamily 5 495 4.4E-83 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VAB027_3505 2f10312e7aa042d193bc4c60f73a2267 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 1.7E-80 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAB027_3651 1264bddb50c58417e67aa7c96507230c 67 Gene3D G3DSA:1.10.260.40 1 66 1.2E-7 T 14-10-2018 VAB027_3651 1264bddb50c58417e67aa7c96507230c 67 SUPERFAMILY SSF47413 1 64 2.0E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_3651 1264bddb50c58417e67aa7c96507230c 67 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 9.3E-19 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_35 6f241e714dc97b6c2cbb83765a59cf5d 375 SUPERFAMILY SSF54106 38 86 3.4E-7 T 14-10-2018 VAB027_35 6f241e714dc97b6c2cbb83765a59cf5d 375 SMART SM00257 39 87 7.8E-7 T 14-10-2018 IPR018392 LysM domain VAB027_35 6f241e714dc97b6c2cbb83765a59cf5d 375 Gene3D G3DSA:3.10.350.10 38 85 2.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_35 6f241e714dc97b6c2cbb83765a59cf5d 375 Pfam PF01476 LysM domain 40 86 5.7E-13 T 14-10-2018 IPR018392 LysM domain VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 PRINTS PR00070 Dihydrofolate reductase signature 41 52 9.2E-14 T 14-10-2018 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 PRINTS PR00070 Dihydrofolate reductase signature 92 106 9.2E-14 T 14-10-2018 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 PRINTS PR00070 Dihydrofolate reductase signature 28 36 9.2E-14 T 14-10-2018 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 PRINTS PR00070 Dihydrofolate reductase signature 14 24 9.2E-14 T 14-10-2018 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 Gene3D G3DSA:3.40.430.10 1 163 4.3E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 Pfam PF00186 Dihydrofolate reductase 2 159 3.3E-61 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 PIRSF PIRSF000194 1 162 3.3E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VAB027_3391 2ecaf4b3b7374ad7f5ca1a95e6445f0d 165 SUPERFAMILY SSF53597 1 160 9.56E-58 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 SMART SM00283 257 518 2.7E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 SUPERFAMILY SSF55785 19 114 3.32E-26 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 Pfam PF08447 PAS fold 31 114 1.5E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 113 1.5E-13 T 14-10-2018 IPR000014 PAS domain VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 485 3.9E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 Gene3D G3DSA:1.10.287.950 193 519 3.0E-52 T 14-10-2018 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 Gene3D G3DSA:3.30.450.20 9 151 5.1E-25 T 14-10-2018 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 SUPERFAMILY SSF58104 237 518 8.63E-58 T 14-10-2018 VAB027_508 fbd46bfe5fb22314486a764da45e9865 520 SMART SM00091 8 75 0.0054 T 14-10-2018 IPR000014 PAS domain VAB027_258 eac2581e0b62a7c51f9f2d754652534a 196 PIRSF PIRSF016482 1 196 2.9E-86 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VAB027_258 eac2581e0b62a7c51f9f2d754652534a 196 Gene3D G3DSA:3.30.70.60 92 196 3.4E-27 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VAB027_258 eac2581e0b62a7c51f9f2d754652534a 196 Pfam PF04350 Pilus assembly protein, PilO 50 189 1.2E-45 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 SUPERFAMILY SSF46894 188 258 4.76E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 Gene3D G3DSA:1.10.10.10 141 262 9.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 254 4.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3359 d0ecd50bf2506321b441fadc50fc7d29 265 SMART SM00421 198 255 1.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 9 82 6.0E-35 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 24.229 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 7 89 1.3E-27 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 Pfam PF01371 Trp repressor protein 9 94 1.2E-33 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 PIRSF PIRSF003196 1 99 4.6E-41 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 Gene3D G3DSA:1.10.1270.10 1 98 1.6E-35 T 14-10-2018 IPR038116 TrpR-like superfamily VAB027_3148 24e1d348f25f89e23fbac071ebb24262 103 SUPERFAMILY SSF48295 2 95 2.67E-30 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VAB027_2227 74904f2267d5ff3cea673b685d41b8b8 251 Pfam PF12697 Alpha/beta hydrolase family 29 240 1.0E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2227 74904f2267d5ff3cea673b685d41b8b8 251 SUPERFAMILY SSF53474 28 243 4.42E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2227 74904f2267d5ff3cea673b685d41b8b8 251 Gene3D G3DSA:3.40.50.1820 23 246 9.8E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_3057 89ba40ef30593f32df296def6f743224 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 1.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3057 89ba40ef30593f32df296def6f743224 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.926 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 SUPERFAMILY SSF56719 388 619 6.02E-80 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAB027_3057 89ba40ef30593f32df296def6f743224 626 SMART SM00387 27 173 3.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3057 89ba40ef30593f32df296def6f743224 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 8.0E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 Gene3D G3DSA:3.30.230.10 216 389 1.9E-56 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_3057 89ba40ef30593f32df296def6f743224 626 SUPERFAMILY SSF54211 217 382 3.41E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3057 89ba40ef30593f32df296def6f743224 626 Pfam PF01751 Toprim domain 413 522 2.7E-13 T 14-10-2018 IPR006171 TOPRIM domain VAB027_3057 89ba40ef30593f32df296def6f743224 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3057 89ba40ef30593f32df296def6f743224 626 SUPERFAMILY SSF55874 5 215 1.23E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3057 89ba40ef30593f32df296def6f743224 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 Gene3D G3DSA:3.40.50.670 390 621 1.9E-94 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3057 89ba40ef30593f32df296def6f743224 626 Gene3D G3DSA:3.30.565.10 2 215 6.8E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3057 89ba40ef30593f32df296def6f743224 626 SMART SM00433 34 622 7.0E-216 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.3E-127 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAB027_3057 89ba40ef30593f32df296def6f743224 626 Pfam PF00204 DNA gyrase B 218 384 1.4E-42 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.4E-58 T 14-10-2018 VAB027_3057 89ba40ef30593f32df296def6f743224 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.4E-58 T 14-10-2018 VAB027_692 d7958441cc4367e20b5f583a70b36891 125 Gene3D G3DSA:3.10.450.50 1 124 1.1E-19 T 14-10-2018 VAB027_692 d7958441cc4367e20b5f583a70b36891 125 SUPERFAMILY SSF54427 1 122 3.58E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_767 d7958441cc4367e20b5f583a70b36891 125 Gene3D G3DSA:3.10.450.50 1 124 1.1E-19 T 14-10-2018 VAB027_767 d7958441cc4367e20b5f583a70b36891 125 SUPERFAMILY SSF54427 1 122 3.58E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 Pfam PF03466 LysR substrate binding domain 96 303 4.0E-16 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 Gene3D G3DSA:1.10.10.10 3 89 7.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 Gene3D G3DSA:3.40.190.10 177 275 4.8E-40 T 14-10-2018 VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 SUPERFAMILY SSF53850 92 300 2.35E-32 T 14-10-2018 VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 SUPERFAMILY SSF46785 6 88 5.78E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 Gene3D G3DSA:3.40.190.10 92 299 4.8E-40 T 14-10-2018 VAB027_356 eea6d115f12cfdff79bca8716e76efac 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 3.8E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2557 ba8ccad46efc429076ad8de13ff7a42a 93 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 18.805 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VAB027_2557 ba8ccad46efc429076ad8de13ff7a42a 93 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 83 1.8E-14 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VAB027_452 8f6966dfe1711ef193ec5c97992a7db1 410 Gene3D G3DSA:3.90.350.10 14 295 7.2E-80 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_452 8f6966dfe1711ef193ec5c97992a7db1 410 Pfam PF01609 Transposase DDE domain 169 308 2.1E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_452 8f6966dfe1711ef193ec5c97992a7db1 410 Pfam PF02281 Transposase Tn5 dimerisation domain 317 403 3.9E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_452 8f6966dfe1711ef193ec5c97992a7db1 410 Gene3D G3DSA:1.10.740.10 296 406 2.4E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_452 8f6966dfe1711ef193ec5c97992a7db1 410 SUPERFAMILY SSF53098 1 408 2.88E-120 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3046 8f6966dfe1711ef193ec5c97992a7db1 410 Gene3D G3DSA:3.90.350.10 14 295 7.2E-80 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_3046 8f6966dfe1711ef193ec5c97992a7db1 410 Pfam PF01609 Transposase DDE domain 169 308 2.1E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_3046 8f6966dfe1711ef193ec5c97992a7db1 410 Pfam PF02281 Transposase Tn5 dimerisation domain 317 403 3.9E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_3046 8f6966dfe1711ef193ec5c97992a7db1 410 Gene3D G3DSA:1.10.740.10 296 406 2.4E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_3046 8f6966dfe1711ef193ec5c97992a7db1 410 SUPERFAMILY SSF53098 1 408 2.88E-120 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 ProSitePatterns PS00455 Putative AMP-binding domain signature. 280 291 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 Pfam PF13193 AMP-binding enzyme C-terminal domain 549 623 1.3E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 Gene3D G3DSA:3.40.50.12780 81 531 2.4E-54 T 14-10-2018 VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 Gene3D G3DSA:3.30.300.30 534 659 2.7E-16 T 14-10-2018 VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 SUPERFAMILY SSF56801 37 649 6.28E-120 T 14-10-2018 VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 Pfam PF00501 AMP-binding enzyme 107 535 3.8E-41 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_357 af4dd78f2e505b3ae8b25e18f71d3707 659 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 651 9.9E-236 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 Gene3D G3DSA:1.10.10.250 73 141 6.1E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VAB027_3518 13b836044ce56c1591ba469aae902f14 142 Gene3D G3DSA:3.30.1550.10 2 72 4.0E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VAB027_3518 13b836044ce56c1591ba469aae902f14 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.7E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal VAB027_3518 13b836044ce56c1591ba469aae902f14 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.0E-22 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 SUPERFAMILY SSF46906 68 141 2.09E-24 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VAB027_3518 13b836044ce56c1591ba469aae902f14 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.5E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-17 T 14-10-2018 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 SMART SM00649 9 141 9.2E-83 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.643 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VAB027_3518 13b836044ce56c1591ba469aae902f14 142 SUPERFAMILY SSF54747 3 73 3.92E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 370 3.1E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 6 234 1.6E-180 T 14-10-2018 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 12 271 1.6E-180 T 14-10-2018 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 9.4E-47 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 382 59.32 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 104 373 1.6E-180 T 14-10-2018 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 234 383 9.03E-71 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 112 233 4.32E-53 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 4.6E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 380 1.3E-199 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 PIRSF PIRSF000497 1 382 6.0E-176 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_3351 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 4 110 2.51E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAB027_349 5ae3800912755032ed111df755fe9b9c 437 SUPERFAMILY SSF54631 201 336 4.2E-18 T 14-10-2018 VAB027_349 5ae3800912755032ed111df755fe9b9c 437 SMART SM01091 348 428 7.3E-25 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_349 5ae3800912755032ed111df755fe9b9c 437 Gene3D G3DSA:3.30.465.10 349 428 1.5E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VAB027_349 5ae3800912755032ed111df755fe9b9c 437 Pfam PF01595 Domain of unknown function DUF21 9 199 4.6E-41 T 14-10-2018 IPR002550 CNNM, transmembrane domain VAB027_349 5ae3800912755032ed111df755fe9b9c 437 Pfam PF03471 Transporter associated domain 350 427 5.6E-20 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_349 5ae3800912755032ed111df755fe9b9c 437 Gene3D G3DSA:3.10.580.10 195 348 1.2E-26 T 14-10-2018 VAB027_349 5ae3800912755032ed111df755fe9b9c 437 SUPERFAMILY SSF56176 346 430 4.09E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 Gene3D G3DSA:1.10.3370.10 10 430 6.1E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.122 T 14-10-2018 IPR026593 Protein translocase subunit SecY VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 3.5E-134 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 SUPERFAMILY SSF103491 15 425 3.79E-130 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PIRSF PIRSF004557 11 442 9.4E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 4.9E-95 T 14-10-2018 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 Pfam PF00344 SecY translocase 76 418 1.5E-117 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_1293 d35950f1687d1310f0fd9902369d054a 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAB027_2471 4a912fd68e1419be6102cb952cb12b20 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.5E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_2471 4a912fd68e1419be6102cb952cb12b20 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAB027_2471 4a912fd68e1419be6102cb952cb12b20 506 Gene3D G3DSA:3.40.309.10 270 501 2.3E-73 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_2471 4a912fd68e1419be6102cb952cb12b20 506 Gene3D G3DSA:3.40.605.10 11 269 2.9E-91 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_2471 4a912fd68e1419be6102cb952cb12b20 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAB027_2471 4a912fd68e1419be6102cb952cb12b20 506 SUPERFAMILY SSF53720 12 497 1.44E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_2379 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 2.1E-30 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2379 8e2e093d3a141b098f5babaf6cf59ea4 401 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.06 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2379 8e2e093d3a141b098f5babaf6cf59ea4 401 Gene3D G3DSA:3.40.50.720 1 399 2.5E-181 T 14-10-2018 VAB027_2379 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2379 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 4.7E-112 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.0E-38 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 6.0E-8 T 14-10-2018 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 SMART SM00729 14 222 3.7E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.654 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 Pfam PF04055 Radical SAM superfamily 19 181 4.1E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 Gene3D G3DSA:3.20.20.70 2 329 1.1E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 SUPERFAMILY SSF102114 7 287 7.46E-67 T 14-10-2018 VAB027_1707 053074a97a3ea6b0b7840352fcf66d76 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 3.7E-102 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_3590 7b45197410ec009e45c6ddac14d6bbb7 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 1.3E-68 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 VAB027_3590 7b45197410ec009e45c6ddac14d6bbb7 376 Gene3D G3DSA:3.40.50.2000 6 187 8.0E-106 T 14-10-2018 VAB027_3590 7b45197410ec009e45c6ddac14d6bbb7 376 SUPERFAMILY SSF53756 3 374 9.42E-113 T 14-10-2018 VAB027_3590 7b45197410ec009e45c6ddac14d6bbb7 376 Gene3D G3DSA:3.40.50.2000 188 328 8.0E-106 T 14-10-2018 VAB027_3590 7b45197410ec009e45c6ddac14d6bbb7 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 361 1.2E-90 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:3.40.440.10 6 249 4.5E-106 T 14-10-2018 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 SMART SM00788 4 425 0.0 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:3.90.170.10 267 432 7.3E-70 T 14-10-2018 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 8.3E-195 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:1.10.300.10 102 201 4.5E-106 T 14-10-2018 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 221.069 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 SUPERFAMILY SSF52540 3 430 6.48E-183 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1267 816ea85d0cca2691e7242e36cf3fe253 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 5.9E-182 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAB027_1327 5ec426e069ba5830be8cc692c7599625 330 SUPERFAMILY SSF53850 24 326 8.07E-66 T 14-10-2018 VAB027_1327 5ec426e069ba5830be8cc692c7599625 330 Gene3D G3DSA:3.40.190.10 126 325 1.4E-116 T 14-10-2018 VAB027_1327 5ec426e069ba5830be8cc692c7599625 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 1.0E-154 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VAB027_1327 5ec426e069ba5830be8cc692c7599625 330 Gene3D G3DSA:3.40.190.10 26 300 1.4E-116 T 14-10-2018 VAB027_1327 5ec426e069ba5830be8cc692c7599625 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 329 1.9E-148 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VAB027_1327 5ec426e069ba5830be8cc692c7599625 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 6.3E-21 T 14-10-2018 VAB027_2616 d687c1dada26d0b37db96df46d6cbb38 441 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.332 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VAB027_2616 d687c1dada26d0b37db96df46d6cbb38 441 SUPERFAMILY SSF109604 23 437 2.95E-80 T 14-10-2018 VAB027_2616 d687c1dada26d0b37db96df46d6cbb38 441 Pfam PF13286 Phosphohydrolase-associated domain 343 433 1.3E-27 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain VAB027_2616 d687c1dada26d0b37db96df46d6cbb38 441 Pfam PF01966 HD domain 62 143 5.7E-7 T 14-10-2018 IPR006674 HD domain VAB027_2616 d687c1dada26d0b37db96df46d6cbb38 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.7E-141 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VAB027_2616 d687c1dada26d0b37db96df46d6cbb38 441 SMART SM00471 58 264 5.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_585 aee6ee30588e52f380114835f8c89618 565 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 3.3E-41 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VAB027_585 aee6ee30588e52f380114835f8c89618 565 Gene3D G3DSA:3.40.190.10 122 312 4.6E-35 T 14-10-2018 VAB027_585 aee6ee30588e52f380114835f8c89618 565 SUPERFAMILY SSF53850 121 558 5.61E-59 T 14-10-2018 VAB027_585 aee6ee30588e52f380114835f8c89618 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 306 6.0E-20 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 Gene3D G3DSA:1.10.287.950 295 611 3.6E-61 T 14-10-2018 VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 591 8.8E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 SUPERFAMILY SSF58104 315 625 1.57E-61 T 14-10-2018 VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 8.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 8.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 8.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2513 922c149f5d526f2d202bd285f3ec8db3 626 SMART SM00283 364 625 2.0E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1034 c669f45b4ba56684ae0ba1f3c3b0ff0d 510 Gene3D G3DSA:3.10.105.10 253 480 1.1E-92 T 14-10-2018 VAB027_1034 c669f45b4ba56684ae0ba1f3c3b0ff0d 510 Gene3D G3DSA:3.40.190.10 59 492 1.1E-92 T 14-10-2018 VAB027_1034 c669f45b4ba56684ae0ba1f3c3b0ff0d 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 416 4.0E-65 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_1034 c669f45b4ba56684ae0ba1f3c3b0ff0d 510 PIRSF PIRSF002741 50 509 5.7E-67 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAB027_1034 c669f45b4ba56684ae0ba1f3c3b0ff0d 510 SUPERFAMILY SSF53850 51 502 1.41E-96 T 14-10-2018 VAB027_2171 a016d786578da5b242b3004467962607 240 SMART SM00382 29 201 3.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2171 a016d786578da5b242b3004467962607 240 Pfam PF00005 ABC transporter 27 164 4.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2171 a016d786578da5b242b3004467962607 240 Gene3D G3DSA:3.40.50.300 4 237 3.8E-51 T 14-10-2018 VAB027_2171 a016d786578da5b242b3004467962607 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2171 a016d786578da5b242b3004467962607 240 SUPERFAMILY SSF52540 5 216 6.74E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2482 592fa3fcd114ffd0bdea0aed572c9136 135 PIRSF PIRSF003230 1 133 8.6E-48 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VAB027_2482 592fa3fcd114ffd0bdea0aed572c9136 135 SUPERFAMILY SSF54637 3 126 6.81E-42 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_2482 592fa3fcd114ffd0bdea0aed572c9136 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 123 6.4E-39 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VAB027_2482 592fa3fcd114ffd0bdea0aed572c9136 135 Gene3D G3DSA:3.10.129.10 1 132 1.2E-43 T 14-10-2018 VAB027_2482 592fa3fcd114ffd0bdea0aed572c9136 135 Pfam PF03061 Thioesterase superfamily 18 101 4.1E-21 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAB027_2482 592fa3fcd114ffd0bdea0aed572c9136 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 126 6.6E-53 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VAB027_3754 f20bfa6055efd5e62fe283f854f5658d 160 Pfam PF05280 Flagellar transcriptional activator (FlhC) 9 154 2.5E-8 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 VAB027_3754 f20bfa6055efd5e62fe283f854f5658d 160 SUPERFAMILY SSF160930 1 152 8.5E-31 T 14-10-2018 VAB027_3467 1d0d4483a7b5a4ff309e9099d76493ce 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-38 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3467 1d0d4483a7b5a4ff309e9099d76493ce 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.143 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_3467 1d0d4483a7b5a4ff309e9099d76493ce 122 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3467 1d0d4483a7b5a4ff309e9099d76493ce 122 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAB027_3467 1d0d4483a7b5a4ff309e9099d76493ce 122 Gene3D G3DSA:3.30.70.60 1 92 3.3E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VAB027_3467 1d0d4483a7b5a4ff309e9099d76493ce 122 SUPERFAMILY SSF54995 1 103 1.44E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1706 04abb1452f3a97f5716acf814601df71 113 Gene3D G3DSA:1.20.120.160 1 111 1.2E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_1706 04abb1452f3a97f5716acf814601df71 113 SUPERFAMILY SSF47226 3 111 8.24E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_1706 04abb1452f3a97f5716acf814601df71 113 Pfam PF01627 Hpt domain 25 103 1.8E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_680 d6fcad1803b264a79a8dce3dab2230c0 133 PIRSF PIRSF018297 2 130 3.3E-38 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 VAB027_680 d6fcad1803b264a79a8dce3dab2230c0 133 Gene3D G3DSA:1.20.120.1870 5 132 1.1E-27 T 14-10-2018 VAB027_680 d6fcad1803b264a79a8dce3dab2230c0 133 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 9 102 1.9E-14 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 VAB027_1978 eed8c7c797d064601c9ea3634628d3bd 204 Pfam PF00293 NUDIX domain 46 149 1.2E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_1978 eed8c7c797d064601c9ea3634628d3bd 204 SUPERFAMILY SSF55811 18 190 7.99E-35 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_1978 eed8c7c797d064601c9ea3634628d3bd 204 Gene3D G3DSA:3.90.79.10 11 197 3.8E-49 T 14-10-2018 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 5.4E-62 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.5E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 SUPERFAMILY SSF53901 14 294 1.42E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 3.8E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 Gene3D G3DSA:3.40.47.10 5 434 1.5E-109 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 SUPERFAMILY SSF53901 296 434 1.6E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 PIRSF PIRSF000429 8 435 1.3E-116 T 14-10-2018 IPR002155 Thiolase GO:0016747 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 5.3E-262 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAB027_1727 0eb3f10234b5965068d945eb4d87ae11 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.904 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.6E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.599 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 SUPERFAMILY SSF50465 298 393 2.3E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Gene3D G3DSA:2.40.30.10 207 334 2.1E-51 T 14-10-2018 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 SUPERFAMILY SSF52540 6 219 1.77E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Gene3D G3DSA:2.40.30.10 338 393 7.3E-30 T 14-10-2018 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.7E-232 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Gene3D G3DSA:3.40.50.300 1 203 1.6E-70 T 14-10-2018 VAB027_3470 1da12d5f371a972a92853dda68dfeb41 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 Gene3D G3DSA:3.30.43.10 1 72 8.5E-22 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 Gene3D G3DSA:3.30.465.10 73 221 2.1E-57 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 331 2.0E-33 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 SUPERFAMILY SSF56176 8 198 7.85E-44 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 Gene3D G3DSA:3.90.78.10 222 347 2.5E-50 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 85.85 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 2.2E-94 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 Pfam PF01565 FAD binding domain 23 153 4.7E-21 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VAB027_3528 1a61c970f5cdc77d87f23322719d965b 347 SUPERFAMILY SSF56194 205 342 1.44E-49 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 SUPERFAMILY SSF55186 65 242 4.19E-62 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 2.9E-240 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Gene3D G3DSA:3.30.980.10 70 223 2.2E-62 T 14-10-2018 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.251 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 SUPERFAMILY SSF81271 3 61 1.01E-14 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 SMART SM00863 171 220 5.3E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.0E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.0E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.0E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.0E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.0E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 8.0E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 SUPERFAMILY SSF52954 530 635 2.72E-32 T 14-10-2018 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Gene3D G3DSA:3.10.20.30 3 62 1.8E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 9.9E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Pfam PF03129 Anticodon binding domain 542 631 2.5E-22 T 14-10-2018 IPR004154 Anticodon-binding VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Gene3D G3DSA:3.30.930.10 224 532 4.6E-128 T 14-10-2018 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 SUPERFAMILY SSF55681 244 527 2.87E-98 T 14-10-2018 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Pfam PF02824 TGS domain 4 61 5.0E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Gene3D G3DSA:3.40.50.800 533 642 2.6E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VAB027_772 fd248978a85981df90e5aa7700de5abe 642 Gene3D G3DSA:3.30.54.20 131 188 2.2E-62 T 14-10-2018 VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 Gene3D G3DSA:1.10.1760.20 39 203 4.8E-5 T 14-10-2018 VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 Pfam PF06580 Histidine kinase 366 444 6.7E-27 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 Pfam PF13492 GAF domain 242 351 3.2E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 SUPERFAMILY SSF55781 227 351 3.64E-8 T 14-10-2018 VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 Gene3D G3DSA:3.30.450.40 227 352 5.6E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 Gene3D G3DSA:3.30.565.10 417 555 2.2E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 SUPERFAMILY SSF55874 420 553 1.19E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3154 3a8d77a271557242fe4b0ca24282caed 558 Pfam PF07694 5TMR of 5TMR-LYT 25 193 2.8E-58 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VAB027_2263 d35cfaff78b4e582d3a047657ba963ff 168 Pfam PF01863 Protein of unknown function DUF45 97 150 1.9E-10 T 14-10-2018 IPR002725 Protein of unknown function DUF45 VAB027_2263 d35cfaff78b4e582d3a047657ba963ff 168 Gene3D G3DSA:3.30.2010.10 84 164 2.3E-6 T 14-10-2018 VAB027_2505 896d6cd96a6b9a729319970812271113 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 8.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2505 896d6cd96a6b9a729319970812271113 246 SUPERFAMILY SSF161098 11 227 1.09E-38 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2505 896d6cd96a6b9a729319970812271113 246 Gene3D G3DSA:1.10.3720.10 3 243 1.0E-49 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2505 896d6cd96a6b9a729319970812271113 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 6.7E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_2770 dbc0144b07f2162af3f6f4460837a7fb 136 PIRSF PIRSF039090 1 133 4.9E-45 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VAB027_2770 dbc0144b07f2162af3f6f4460837a7fb 136 Gene3D G3DSA:1.20.120.340 2 126 3.9E-41 T 14-10-2018 VAB027_2770 dbc0144b07f2162af3f6f4460837a7fb 136 SUPERFAMILY SSF101116 6 127 3.27E-40 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VAB027_2770 dbc0144b07f2162af3f6f4460837a7fb 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 4.5E-27 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VAB027_2770 dbc0144b07f2162af3f6f4460837a7fb 136 Pfam PF02561 Flagellar protein FliS 6 122 5.3E-39 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 SUPERFAMILY SSF48008 87 223 7.32E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 SMART SM00345 22 80 6.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 Gene3D G3DSA:1.10.10.10 2 81 5.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 Pfam PF07729 FCD domain 90 216 1.6E-26 T 14-10-2018 IPR011711 GntR, C-terminal VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 SUPERFAMILY SSF46785 15 107 2.63E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 2.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 Gene3D G3DSA:1.20.120.530 83 225 5.9E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAB027_2012 4405c912ed3231d7dabcaf51624e1ead 234 SMART SM00895 90 217 2.7E-23 T 14-10-2018 IPR011711 GntR, C-terminal VAB027_3454 c966d668d7fd4034bcd6c5f6bf949bea 70 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 2 64 5.4E-20 T 14-10-2018 IPR014318 Phage shock protein, PspG VAB027_3454 c966d668d7fd4034bcd6c5f6bf949bea 70 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 4 64 5.2E-19 T 14-10-2018 IPR014318 Phage shock protein, PspG VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 SUPERFAMILY SSF141868 418 671 7.72E-88 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 Gene3D G3DSA:3.30.70.270 236 414 3.3E-58 T 14-10-2018 VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 Pfam PF00563 EAL domain 420 655 6.0E-74 T 14-10-2018 IPR001633 EAL domain VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 Gene3D G3DSA:3.20.20.450 415 676 1.0E-96 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 SMART SM00052 412 660 2.5E-105 T 14-10-2018 IPR001633 EAL domain VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 SMART SM00267 231 402 3.2E-59 T 14-10-2018 IPR000160 GGDEF domain VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 4.9E-45 T 14-10-2018 IPR000160 GGDEF domain VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 SUPERFAMILY SSF55073 247 404 1.65E-47 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_3189 61320d2efafccdf9fc6802a2d17cfced 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 1.6E-38 T 14-10-2018 IPR000160 GGDEF domain VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 211 317 1.4E-22 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 SUPERFAMILY SSF48019 210 322 9.52E-27 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 Gene3D G3DSA:3.40.50.300 5 168 3.3E-48 T 14-10-2018 VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 SUPERFAMILY SSF52540 8 194 2.2E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 Pfam PF13177 DNA polymerase III, delta subunit 18 168 3.4E-44 T 14-10-2018 VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 199 1.4E-61 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_2652 9dd582b74884b795c85916a4c9a81fc5 324 Gene3D G3DSA:1.20.272.10 212 322 8.5E-7 T 14-10-2018 VAB027_919 916d9dcc02b5730f4c756adfcfeeead7 589 PIRSF PIRSF028304 1 589 1.5E-188 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VAB027_919 916d9dcc02b5730f4c756adfcfeeead7 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 589 1.2E-209 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VAB027_919 916d9dcc02b5730f4c756adfcfeeead7 589 Pfam PF05947 Type VI secretion system, TssF 5 588 1.9E-199 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VAB027_2226 cf3951115d8536f97e98b57869819e72 148 PIRSF PIRSF028065 1 148 5.6E-76 T 14-10-2018 IPR016865 Inner membrane protein RclC VAB027_2226 cf3951115d8536f97e98b57869819e72 148 Pfam PF04224 Protein of unknown function, DUF417 1 144 1.8E-47 T 14-10-2018 IPR007339 Inner membrane protein RclC-like VAB027_2895 23bd999363e193cfd92462389cb2e976 402 SUPERFAMILY SSF51735 2 150 2.02E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2895 23bd999363e193cfd92462389cb2e976 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 2.4E-163 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 SUPERFAMILY SSF55347 126 274 2.13E-62 T 14-10-2018 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 3.3E-38 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 SUPERFAMILY SSF69055 302 399 1.11E-28 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 Gene3D G3DSA:1.10.1740.10 312 402 1.3E-26 T 14-10-2018 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 46.57 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.5E-47 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.3E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 Gene3D G3DSA:3.40.50.720 1 150 2.5E-53 T 14-10-2018 VAB027_2895 23bd999363e193cfd92462389cb2e976 402 PIRSF PIRSF006205 1 402 2.6E-153 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAB027_2975 c90c0fe1711ed1beacbeb9b221d1262c 779 Pfam PF07238 PilZ domain 144 228 4.4E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VAB027_2975 c90c0fe1711ed1beacbeb9b221d1262c 779 Pfam PF07238 PilZ domain 469 552 2.4E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VAB027_2975 c90c0fe1711ed1beacbeb9b221d1262c 779 SUPERFAMILY SSF141371 465 552 2.16E-6 T 14-10-2018 VAB027_2975 c90c0fe1711ed1beacbeb9b221d1262c 779 Gene3D G3DSA:2.40.10.220 465 586 5.7E-5 T 14-10-2018 VAB027_2916 34376a233aff0d3df8d6dac6a02384ba 415 SUPERFAMILY SSF53474 47 411 6.71E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2916 34376a233aff0d3df8d6dac6a02384ba 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 9.2E-235 T 14-10-2018 IPR010520 UPF0255 family VAB027_2916 34376a233aff0d3df8d6dac6a02384ba 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 56.244 T 14-10-2018 IPR010520 UPF0255 family VAB027_2916 34376a233aff0d3df8d6dac6a02384ba 415 Gene3D G3DSA:3.40.50.1820 18 415 1.2E-115 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_910 2e63e4854ff0643457171a87b27add8a 469 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 466 4.5E-156 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VAB027_910 2e63e4854ff0643457171a87b27add8a 469 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 216 465 2.2E-83 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VAB027_910 2e63e4854ff0643457171a87b27add8a 469 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 125 3.0E-26 T 14-10-2018 IPR010657 ImpA, N-terminal VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 SUPERFAMILY SSF53448 4 358 6.34E-78 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 SUPERFAMILY SSF51161 295 395 3.68E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 Pfam PF00483 Nucleotidyl transferase 6 273 8.4E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 Gene3D G3DSA:2.160.10.10 282 404 1.2E-32 T 14-10-2018 VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 51.337 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 Gene3D G3DSA:3.90.550.10 1 281 3.7E-91 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_477 d6948504e3999ab1e3efe03ca3791acb 407 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 6.0E-154 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 SMART SM00347 44 145 6.7E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 Pfam PF12802 MarR family 50 109 2.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 SUPERFAMILY SSF46785 17 156 1.81E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 Gene3D G3DSA:1.10.10.10 2 158 1.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1080 32d91dc9fc7c45950d7c26d56de31d0b 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Gene3D G3DSA:1.10.1240.10 650 738 6.0E-41 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Gene3D G3DSA:3.40.50.280 745 896 3.9E-55 T 14-10-2018 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 SUPERFAMILY SSF51717 357 631 2.62E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 SUPERFAMILY SSF56507 904 1225 2.09E-130 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 SUPERFAMILY SSF82282 8 400 2.88E-118 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Gene3D G3DSA:3.20.20.20 342 643 2.0E-131 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 1.5E-80 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.2E-59 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 SUPERFAMILY SSF47644 654 740 1.11E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Gene3D G3DSA:3.20.20.330 2 341 1.8E-127 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 SUPERFAMILY SSF52242 744 895 1.57E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Gene3D G3DSA:1.10.288.10 938 1094 4.5E-146 T 14-10-2018 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 PIRSF PIRSF000381 3 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Gene3D G3DSA:3.10.196.10 909 1224 4.5E-146 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Pfam PF02607 B12 binding domain 660 734 1.4E-26 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 SMART SM01018 658 741 1.4E-45 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 5.4E-123 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3441 3e1d5909b98ca9ae7a281d0fce8de0e6 1226 Pfam PF02310 B12 binding domain 749 843 2.4E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VAB027_327 bc4ee1214636bdeacd74e41e0d20758a 114 Pfam PF08447 PAS fold 39 110 1.4E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VAB027_327 bc4ee1214636bdeacd74e41e0d20758a 114 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 107 1.0E-10 T 14-10-2018 IPR000014 PAS domain VAB027_327 bc4ee1214636bdeacd74e41e0d20758a 114 Gene3D G3DSA:3.30.450.20 5 112 1.9E-17 T 14-10-2018 VAB027_327 bc4ee1214636bdeacd74e41e0d20758a 114 SUPERFAMILY SSF55785 27 110 2.09E-18 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_488 5cbcef9d6fbd160972241db1dbb8eb54 42 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.7E-24 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VAB027_488 5cbcef9d6fbd160972241db1dbb8eb54 42 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 4.9E-29 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 SUPERFAMILY SSF47384 440 509 8.44E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 1.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 664 7.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 SUPERFAMILY SSF55874 502 664 7.33E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 Gene3D G3DSA:3.30.565.10 517 673 2.2E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 4.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 4.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 4.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 4.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 Pfam PF17202 Single cache domain 3 201 314 3.8E-25 T 14-10-2018 IPR033463 Single cache domain 3 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 Gene3D G3DSA:1.10.287.130 437 510 1.9E-20 T 14-10-2018 VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 SMART SM00387 555 666 1.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 SUPERFAMILY SSF103190 150 307 3.3E-16 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_2167 9707a5ee680b24e437411a5fb4ac7214 677 SMART SM00388 445 512 5.7E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2599 ba4a1bb377e5f49b6275932b23aee939 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.2E-34 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VAB027_2599 ba4a1bb377e5f49b6275932b23aee939 87 SUPERFAMILY SSF55229 33 85 1.83E-16 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VAB027_2599 ba4a1bb377e5f49b6275932b23aee939 87 Gene3D G3DSA:3.30.1070.10 1 84 3.1E-26 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VAB027_2599 ba4a1bb377e5f49b6275932b23aee939 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.75 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VAB027_2599 ba4a1bb377e5f49b6275932b23aee939 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 2.2E-23 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.651 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.1E-63 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 Gene3D G3DSA:3.90.226.10 2 318 9.9E-121 T 14-10-2018 VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 SUPERFAMILY SSF52096 5 318 1.83E-103 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_2885 c759fbf3954d5c4539403b113f21a126 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.9E-163 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1935 13cd41d05de1e33b18d837a200559c20 327 Gene3D G3DSA:3.30.70.100 1 96 2.2E-32 T 14-10-2018 VAB027_1935 13cd41d05de1e33b18d837a200559c20 327 Gene3D G3DSA:3.40.250.10 97 253 2.4E-50 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_1935 13cd41d05de1e33b18d837a200559c20 327 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 44.617 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 VAB027_1935 13cd41d05de1e33b18d837a200559c20 327 SUPERFAMILY SSF52821 94 237 1.37E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_1935 13cd41d05de1e33b18d837a200559c20 327 Pfam PF00581 Rhodanese-like domain 118 210 5.2E-8 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_1935 13cd41d05de1e33b18d837a200559c20 327 SMART SM00450 113 214 3.0E-21 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_686 0723966b6123a306c96e072f0da3062e 131 Pfam PF11948 Protein of unknown function (DUF3465) 11 131 1.2E-59 T 14-10-2018 IPR021856 Protein of unknown function DUF3465 VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 120 149 5.8E-37 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 89 100 5.8E-37 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 101 119 5.8E-37 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 PRINTS PR01576 Peptide deformylase signature 33 62 5.8E-37 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 PIRSF PIRSF004749 1 169 1.4E-56 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.85 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 SUPERFAMILY SSF56420 3 165 3.14E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 Gene3D G3DSA:3.90.45.10 1 169 9.6E-68 T 14-10-2018 IPR036821 Peptide deformylase superfamily VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 Pfam PF01327 Polypeptide deformylase 4 152 1.5E-49 T 14-10-2018 IPR023635 Peptide deformylase VAB027_34 8fac7c120cc643ea75f56ca08b173f41 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.7E-61 T 14-10-2018 IPR023635 Peptide deformylase VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 9.2E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 SMART SM00421 156 213 5.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 Gene3D G3DSA:3.40.50.2300 182 224 2.7E-14 T 14-10-2018 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 Gene3D G3DSA:3.40.50.2300 1 181 4.8E-67 T 14-10-2018 VAB027_1172 7b753cd5a1ea7569c12c0ad67463e62f 224 SUPERFAMILY SSF46894 150 215 3.74E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_859 19fba83722dc9a9273037b58f86d75d4 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 6.2E-137 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VAB027_859 19fba83722dc9a9273037b58f86d75d4 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.0E-70 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VAB027_859 19fba83722dc9a9273037b58f86d75d4 402 Pfam PF07670 Nucleoside recognition 90 185 6.7E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_859 19fba83722dc9a9273037b58f86d75d4 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.1E-23 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 Gene3D G3DSA:1.20.1050.10 93 211 1.5E-22 T 14-10-2018 VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 Gene3D G3DSA:3.40.30.10 8 84 1.0E-21 T 14-10-2018 VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 209 2.3E-34 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 2.7E-71 T 14-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 SUPERFAMILY SSF47616 76 210 1.7E-42 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 6.5E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAB027_1134 c945bf5a97411975e7b240b83fdb7c03 218 SUPERFAMILY SSF52833 1 76 1.56E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_639 7025ca35cf0644ba75171588dc955f29 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 9.0E-56 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VAB027_639 7025ca35cf0644ba75171588dc955f29 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.4E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_639 7025ca35cf0644ba75171588dc955f29 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 2.8E-9 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VAB027_639 7025ca35cf0644ba75171588dc955f29 379 Gene3D G3DSA:3.60.21.10 1 265 1.5E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_639 7025ca35cf0644ba75171588dc955f29 379 SUPERFAMILY SSF56300 1 320 8.86E-55 T 14-10-2018 VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Pfam PF00571 CBS domain 152 215 4.6E-9 T 14-10-2018 IPR000644 CBS domain VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Pfam PF00571 CBS domain 226 278 2.7E-10 T 14-10-2018 IPR000644 CBS domain VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 622 5.8E-46 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 SUPERFAMILY SSF54631 146 278 1.33E-27 T 14-10-2018 VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 SUPERFAMILY SSF51206 7 134 1.57E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 117 2.4E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 SMART SM00116 233 280 3.1E-6 T 14-10-2018 IPR000644 CBS domain VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 SMART SM00116 159 216 0.77 T 14-10-2018 IPR000644 CBS domain VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.1E-47 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 SMART SM00100 17 134 8.3E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Gene3D G3DSA:3.10.580.10 144 283 5.5E-33 T 14-10-2018 VAB027_1969 33a0bd6882ef6d23a67d9b0172bce220 629 Gene3D G3DSA:2.60.120.10 6 143 5.9E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_2669 b7bb6cb960fbc366399c68ad10a42f18 291 Pfam PF00892 EamA-like transporter family 2 139 1.8E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_2669 b7bb6cb960fbc366399c68ad10a42f18 291 SUPERFAMILY SSF103481 38 143 1.57E-8 T 14-10-2018 VAB027_2669 b7bb6cb960fbc366399c68ad10a42f18 291 SUPERFAMILY SSF103481 194 290 1.18E-8 T 14-10-2018 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 Gene3D G3DSA:3.40.50.720 1 180 1.1E-55 T 14-10-2018 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PIRSF PIRSF000109 1 477 7.1E-241 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 2.4E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 SUPERFAMILY SSF48179 177 472 1.59E-126 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 Gene3D G3DSA:1.20.5.320 435 482 2.7E-25 T 14-10-2018 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 SMART SM01350 179 469 5.8E-214 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 Gene3D G3DSA:1.10.1040.10 181 434 1.9E-102 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 SUPERFAMILY SSF51735 4 174 1.79E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 4.6E-233 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_1217 5f34346d8a7afc6967934721d935d565 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 3.2E-126 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAB027_913 505dda400fbeed001d88d237feecce9a 869 Gene3D G3DSA:3.40.50.300 366 555 8.4E-46 T 14-10-2018 VAB027_913 505dda400fbeed001d88d237feecce9a 869 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 847 1.4E-11 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_913 505dda400fbeed001d88d237feecce9a 869 Gene3D G3DSA:3.40.50.300 177 365 7.6E-60 T 14-10-2018 VAB027_913 505dda400fbeed001d88d237feecce9a 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 3.3E-28 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_913 505dda400fbeed001d88d237feecce9a 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 3.3E-28 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_913 505dda400fbeed001d88d237feecce9a 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 3.3E-28 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_913 505dda400fbeed001d88d237feecce9a 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 3.3E-28 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VAB027_913 505dda400fbeed001d88d237feecce9a 869 SUPERFAMILY SSF52540 557 837 5.04E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_913 505dda400fbeed001d88d237feecce9a 869 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 642 660 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VAB027_913 505dda400fbeed001d88d237feecce9a 869 SMART SM01086 774 864 9.4E-11 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_913 505dda400fbeed001d88d237feecce9a 869 SUPERFAMILY SSF52540 180 555 5.23E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_913 505dda400fbeed001d88d237feecce9a 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 71 3.2E-6 T 14-10-2018 IPR004176 Clp, N-terminal VAB027_913 505dda400fbeed001d88d237feecce9a 869 Pfam PF07724 AAA domain (Cdc48 subfamily) 607 768 3.7E-37 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_913 505dda400fbeed001d88d237feecce9a 869 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 351 7.5E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_913 505dda400fbeed001d88d237feecce9a 869 Gene3D G3DSA:1.10.8.60 774 868 2.0E-9 T 14-10-2018 VAB027_913 505dda400fbeed001d88d237feecce9a 869 Gene3D G3DSA:3.40.50.300 561 772 6.5E-62 T 14-10-2018 VAB027_913 505dda400fbeed001d88d237feecce9a 869 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 857 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VAB027_913 505dda400fbeed001d88d237feecce9a 869 SMART SM00382 216 359 3.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_913 505dda400fbeed001d88d237feecce9a 869 SMART SM00382 608 756 1.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_913 505dda400fbeed001d88d237feecce9a 869 SUPERFAMILY SSF81923 12 127 7.98E-14 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAB027_913 505dda400fbeed001d88d237feecce9a 869 Gene3D G3DSA:1.10.1780.10 5 159 1.1E-38 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAB027_913 505dda400fbeed001d88d237feecce9a 869 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 183 2.6E-10 T 14-10-2018 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 1.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 1.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 1.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 SUPERFAMILY SSF56784 4 192 7.33E-34 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 Gene3D G3DSA:3.40.50.1000 7 183 8.6E-39 T 14-10-2018 IPR023214 HAD superfamily VAB027_2293 75b4ec8539546b34aa6922af2b6ec808 202 Gene3D G3DSA:1.10.150.240 19 84 8.6E-39 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF47917 352 466 2.51E-50 T 14-10-2018 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:2.40.10.170 2 75 7.7E-29 T 14-10-2018 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 1.5E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.1E-247 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 SMART SM00382 142 334 2.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3718 77aa030dbc164bf7358215078a97c897 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.022 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF50615 1 75 1.65E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:1.10.1140.10 352 467 3.4E-53 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF52540 77 355 5.14E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3718 77aa030dbc164bf7358215078a97c897 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 2.3E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3718 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:3.40.50.300 76 351 2.7E-111 T 14-10-2018 VAB027_917 3c3a31f2058ef3e79bfcac51962d90c1 495 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 489 5.0E-79 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VAB027_917 3c3a31f2058ef3e79bfcac51962d90c1 495 SUPERFAMILY SSF49879 25 112 3.16E-9 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VAB027_917 3c3a31f2058ef3e79bfcac51962d90c1 495 Pfam PF00498 FHA domain 35 102 1.1E-5 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VAB027_917 3c3a31f2058ef3e79bfcac51962d90c1 495 Gene3D G3DSA:2.60.200.20 4 119 3.4E-8 T 14-10-2018 VAB027_2209 c58bac1dd7da38057ee016f0cd1cb7d9 233 SUPERFAMILY SSF52540 9 231 2.53E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2209 c58bac1dd7da38057ee016f0cd1cb7d9 233 Pfam PF00005 ABC transporter 29 177 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2209 c58bac1dd7da38057ee016f0cd1cb7d9 233 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2209 c58bac1dd7da38057ee016f0cd1cb7d9 233 SMART SM00382 38 232 7.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2209 c58bac1dd7da38057ee016f0cd1cb7d9 233 Gene3D G3DSA:3.40.50.300 7 233 7.8E-74 T 14-10-2018 VAB027_3079 6595d6972965abe7e67014a3e101a592 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 407 1.4E-30 T 14-10-2018 IPR000160 GGDEF domain VAB027_3079 6595d6972965abe7e67014a3e101a592 430 SUPERFAMILY SSF55073 253 409 1.49E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_3079 6595d6972965abe7e67014a3e101a592 430 SMART SM00267 230 409 2.9E-35 T 14-10-2018 IPR000160 GGDEF domain VAB027_3079 6595d6972965abe7e67014a3e101a592 430 Gene3D G3DSA:3.30.70.270 244 417 8.9E-43 T 14-10-2018 VAB027_3079 6595d6972965abe7e67014a3e101a592 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 403 2.2E-34 T 14-10-2018 IPR000160 GGDEF domain VAB027_3079 6595d6972965abe7e67014a3e101a592 430 Gene3D G3DSA:1.20.1480.50 134 234 3.4E-5 T 14-10-2018 VAB027_760 748bef462ea02112ddf44480c9fd3148 158 Gene3D G3DSA:3.40.630.30 1 156 5.8E-29 T 14-10-2018 VAB027_760 748bef462ea02112ddf44480c9fd3148 158 SUPERFAMILY SSF55729 3 154 6.2E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_760 748bef462ea02112ddf44480c9fd3148 158 Pfam PF13673 Acetyltransferase (GNAT) domain 36 138 1.7E-17 T 14-10-2018 IPR000182 GNAT domain VAB027_688 748bef462ea02112ddf44480c9fd3148 158 Gene3D G3DSA:3.40.630.30 1 156 5.8E-29 T 14-10-2018 VAB027_688 748bef462ea02112ddf44480c9fd3148 158 SUPERFAMILY SSF55729 3 154 6.2E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_688 748bef462ea02112ddf44480c9fd3148 158 Pfam PF13673 Acetyltransferase (GNAT) domain 36 138 1.7E-17 T 14-10-2018 IPR000182 GNAT domain VAB027_2246 830a6bd9073e2cce744881601b5c48f2 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 332 8.6E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_2246 830a6bd9073e2cce744881601b5c48f2 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 335 6.6E-41 T 14-10-2018 IPR000160 GGDEF domain VAB027_2246 830a6bd9073e2cce744881601b5c48f2 353 Gene3D G3DSA:3.30.70.270 177 351 3.2E-47 T 14-10-2018 VAB027_2246 830a6bd9073e2cce744881601b5c48f2 353 SMART SM00267 168 336 2.9E-54 T 14-10-2018 IPR000160 GGDEF domain VAB027_2246 830a6bd9073e2cce744881601b5c48f2 353 SUPERFAMILY SSF55073 184 337 1.96E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_869 4e61d29d954f869b01a4bd9272ff2940 238 Gene3D G3DSA:3.30.110.170 43 210 1.6E-11 T 14-10-2018 VAB027_869 4e61d29d954f869b01a4bd9272ff2940 238 Pfam PF04402 Protein of unknown function (DUF541) 41 211 8.3E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 VAB027_869 4e61d29d954f869b01a4bd9272ff2940 238 Gene3D G3DSA:3.30.70.2970 53 168 1.6E-11 T 14-10-2018 VAB027_869 4e61d29d954f869b01a4bd9272ff2940 238 PIRSF PIRSF029033 1 238 3.8E-121 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 2.2E-163 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 SMART SM01329 7 356 8.8E-203 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 SUPERFAMILY SSF53659 4 360 1.8E-122 T 14-10-2018 VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 Gene3D G3DSA:3.40.718.10 1 363 2.3E-155 T 14-10-2018 VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 3.3E-136 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.189 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VAB027_3113 5f4a3bbf8989437e184b4633591e8082 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 SUPERFAMILY SSF55031 209 319 4.19E-36 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 SUPERFAMILY SSF53187 1 403 2.2E-80 T 14-10-2018 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 Pfam PF01546 Peptidase family M20/M25/M40 139 402 1.4E-14 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 Pfam PF07687 Peptidase dimerisation domain 206 308 2.1E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 404 2.2E-153 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 Gene3D G3DSA:3.30.70.360 209 319 2.9E-173 T 14-10-2018 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.389 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 PIRSF PIRSF037215 1 408 1.2E-178 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VAB027_858 1954741b32c7f3f339b05758d273ea9f 410 Gene3D G3DSA:3.40.630.10 4 400 2.9E-173 T 14-10-2018 VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 78 1.7E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 SUPERFAMILY SSF52833 2 88 1.1E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 SUPERFAMILY SSF47616 84 212 4.26E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 203 5.4E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 213 1.5E-94 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 Gene3D G3DSA:3.40.30.10 5 82 9.1E-26 T 14-10-2018 VAB027_2026 e50e4debda0aa69b23d70791bc13b234 214 Gene3D G3DSA:1.20.1050.10 87 214 1.0E-49 T 14-10-2018 VAB027_2258 c76f2ac7cc6743ce915cef1c59ab7927 124 SUPERFAMILY SSF52540 2 122 5.43E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2258 c76f2ac7cc6743ce915cef1c59ab7927 124 Gene3D G3DSA:3.40.50.300 3 124 6.9E-27 T 14-10-2018 VAB027_2258 c76f2ac7cc6743ce915cef1c59ab7927 124 Pfam PF13671 AAA domain 5 101 3.0E-14 T 14-10-2018 VAB027_2504 367b0f1c4d71ce46bec6b4e849b2ee15 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 217 2.5E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2504 367b0f1c4d71ce46bec6b4e849b2ee15 225 SUPERFAMILY SSF161098 11 203 4.58E-42 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2504 367b0f1c4d71ce46bec6b4e849b2ee15 225 Gene3D G3DSA:1.10.3720.10 1 218 2.8E-50 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2504 367b0f1c4d71ce46bec6b4e849b2ee15 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 9.8E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 SUPERFAMILY SSF53955 87 350 6.75E-55 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 SUPERFAMILY SSF51055 431 481 6.67E-17 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 Pfam PF00182 Chitinase class I 106 325 1.6E-31 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 Gene3D G3DSA:2.10.10.20 438 480 1.0E-16 T 14-10-2018 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 Pfam PF02839 Carbohydrate binding domain 455 477 7.1E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 Gene3D G3DSA:3.30.20.10 178 248 3.9E-78 T 14-10-2018 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 Gene3D G3DSA:1.10.530.10 105 346 3.9E-78 T 14-10-2018 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 SMART SM00495 438 480 6.0E-18 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1425 178cc15daa84f087572b817e43ad7de8 567 SMART SM00495 520 565 0.0022 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1157 16774b7a83d6fd1b3f7760a07671f06e 95 SUPERFAMILY SSF51182 1 93 4.27E-34 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_1157 16774b7a83d6fd1b3f7760a07671f06e 95 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.611 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VAB027_1157 16774b7a83d6fd1b3f7760a07671f06e 95 Gene3D G3DSA:2.60.120.10 1 93 3.5E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1157 16774b7a83d6fd1b3f7760a07671f06e 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 2.4E-34 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.6 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 Gene3D G3DSA:2.40.50.530 1 64 2.2E-17 T 14-10-2018 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 Pfam PF01632 Ribosomal protein L35 2 61 4.2E-20 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 SUPERFAMILY SSF143034 2 63 1.12E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 6.5E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAB027_770 8747abea61d1a0b4fdc865f581531dde 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.7E-118 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 SUPERFAMILY SSF52518 8 381 4.84E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 624 3.5E-301 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 SUPERFAMILY SSF52518 317 503 1.74E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.859 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 Gene3D G3DSA:3.40.50.920 495 625 1.4E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 SMART SM00861 319 483 4.8E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 6.1E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 SUPERFAMILY SSF52922 492 624 3.01E-29 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 Pfam PF02780 Transketolase, C-terminal domain 506 616 3.7E-27 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VAB027_1526 95e49bd4ecaa8cea6b9c34443c12744f 626 Gene3D G3DSA:3.40.50.970 317 489 9.9E-66 T 14-10-2018 VAB027_3281 750d48d0630fd2625777f2e81240fc2c 82 SUPERFAMILY SSF54565 1 77 8.63E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3281 750d48d0630fd2625777f2e81240fc2c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.2E-27 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3281 750d48d0630fd2625777f2e81240fc2c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.891 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3281 750d48d0630fd2625777f2e81240fc2c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3281 750d48d0630fd2625777f2e81240fc2c 82 Pfam PF00886 Ribosomal protein S16 8 68 4.8E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3281 750d48d0630fd2625777f2e81240fc2c 82 Gene3D G3DSA:3.30.1320.10 1 82 1.0E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 SMART SM01049 38 132 3.4E-43 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 511 7.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 SMART SM00283 284 545 6.3E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 Gene3D G3DSA:1.10.287.950 215 546 7.1E-70 T 14-10-2018 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 Pfam PF17200 Single Cache domain 2 41 189 1.3E-47 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 SUPERFAMILY SSF58104 237 546 8.63E-72 T 14-10-2018 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 Gene3D G3DSA:3.30.450.20 37 192 8.4E-65 T 14-10-2018 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 Pfam PF00672 HAMP domain 215 266 7.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3564 32426e6b747efc53aea32be7cab6f6bb 546 SMART SM00304 215 269 1.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1120 618b159f8726c070361313ce6f360e7f 331 Pfam PF13609 Gram-negative porin 7 307 2.7E-31 T 14-10-2018 VAB027_1120 618b159f8726c070361313ce6f360e7f 331 Gene3D G3DSA:2.40.160.10 22 331 2.9E-60 T 14-10-2018 IPR023614 Porin domain superfamily VAB027_1120 618b159f8726c070361313ce6f360e7f 331 SUPERFAMILY SSF56935 22 331 3.66E-54 T 14-10-2018 VAB027_603 594f63c274d25adf2586ea9ac5e5fc82 312 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 311 4.6E-140 T 14-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 1.6E-46 T 14-10-2018 IPR000160 GGDEF domain VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 Gene3D G3DSA:3.30.70.270 263 439 3.3E-55 T 14-10-2018 VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 Gene3D G3DSA:1.20.1480.50 147 249 1.1E-5 T 14-10-2018 VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 SMART SM00267 259 431 4.4E-56 T 14-10-2018 IPR000160 GGDEF domain VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 SUPERFAMILY SSF55073 275 432 6.98E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 426 7.3E-48 T 14-10-2018 IPR000160 GGDEF domain VAB027_2046 ca3ba4eefb332bc30f6accbe258abb43 443 SUPERFAMILY SSF158472 197 240 8.24E-5 T 14-10-2018 VAB027_1309 3e37d13ac8145d54048c57a88c0a6665 302 SUPERFAMILY SSF52402 6 209 1.75E-73 T 14-10-2018 VAB027_1309 3e37d13ac8145d54048c57a88c0a6665 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 4.9E-162 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAB027_1309 3e37d13ac8145d54048c57a88c0a6665 302 Gene3D G3DSA:3.40.50.620 7 212 1.6E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1309 3e37d13ac8145d54048c57a88c0a6665 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.485 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAB027_1309 3e37d13ac8145d54048c57a88c0a6665 302 PIRSF PIRSF002936 1 302 3.0E-156 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAB027_1309 3e37d13ac8145d54048c57a88c0a6665 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.5E-64 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VAB027_116 8004236a41976b143a3d8f3adef49d56 338 SUPERFAMILY SSF53474 36 324 2.11E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_116 8004236a41976b143a3d8f3adef49d56 338 Pfam PF12146 Serine aminopeptidase, S33 53 310 3.6E-66 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VAB027_116 8004236a41976b143a3d8f3adef49d56 338 Gene3D G3DSA:3.40.50.1820 24 330 4.4E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 SUPERFAMILY SSF103088 158 288 2.22E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 Gene3D G3DSA:2.60.40.2540 22 175 3.9E-58 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.8E-131 T 14-10-2018 VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 Pfam PF00691 OmpA family 192 283 1.1E-16 T 14-10-2018 IPR006665 OmpA-like domain VAB027_1692 00e3f3b3053a3cf382a32c3a23d8e1f9 294 Gene3D G3DSA:3.30.1330.60 176 294 3.3E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 194 3.5E-59 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 Pfam PF13241 Putative NAD(P)-binding 6 116 1.4E-31 T 14-10-2018 VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 SUPERFAMILY SSF51735 1 113 3.41E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 Gene3D G3DSA:3.30.160.110 114 148 4.5E-12 T 14-10-2018 VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 Pfam PF10414 Sirohaem synthase dimerisation region 152 206 7.7E-12 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 SUPERFAMILY SSF75615 109 210 3.79E-22 T 14-10-2018 VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 Gene3D G3DSA:3.40.50.720 1 113 2.5E-36 T 14-10-2018 VAB027_2039 ab8bad814a88abb29ab537f246afea2b 312 Gene3D G3DSA:1.10.8.210 150 211 9.8E-8 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 SUPERFAMILY SSF53850 40 529 1.57E-155 T 14-10-2018 VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 Gene3D G3DSA:3.40.190.10 42 524 6.9E-199 T 14-10-2018 VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 Gene3D G3DSA:3.90.76.10 72 195 6.9E-199 T 14-10-2018 VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 PIRSF PIRSF002741 1 543 5.6E-125 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 Gene3D G3DSA:3.10.105.10 297 512 6.9E-199 T 14-10-2018 VAB027_1772 b992a7f0d334e14bd356a41d4a2bd64f 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 5.3E-100 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Gene3D G3DSA:3.10.50.40 177 384 2.1E-76 T 14-10-2018 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Hamap MF_01183 Chaperone SurA [surA]. 11 426 31.811 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Pfam PF09312 SurA N-terminal domain 27 144 1.7E-40 T 14-10-2018 IPR015391 SurA N-terminal VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Gene3D G3DSA:1.10.4030.10 24 150 1.1E-34 T 14-10-2018 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 SUPERFAMILY SSF54534 175 273 3.01E-25 T 14-10-2018 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Pfam PF13616 PPIC-type PPIASE domain 166 272 3.2E-22 T 14-10-2018 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Pfam PF13616 PPIC-type PPIASE domain 279 381 8.3E-23 T 14-10-2018 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 Gene3D G3DSA:3.10.50.40 281 383 2.1E-76 T 14-10-2018 VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 SUPERFAMILY SSF109998 27 200 4.05E-37 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VAB027_3386 50cf1e37b40dfc4310a92dcf7299311d 431 SUPERFAMILY SSF54534 281 383 7.2E-30 T 14-10-2018 VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 Pfam PF01609 Transposase DDE domain 220 360 2.4E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 Gene3D G3DSA:1.10.246.40 2 65 1.5E-23 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 SUPERFAMILY SSF53098 1 460 3.34E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 Pfam PF14706 Transposase DNA-binding 9 65 2.3E-16 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 Gene3D G3DSA:1.10.740.10 348 458 2.9E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 Gene3D G3DSA:3.90.350.10 66 347 1.0E-79 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_562 2e2f248e3496fbd8f42f6b3976e93aeb 462 Pfam PF02281 Transposase Tn5 dimerisation domain 369 455 4.8E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 Pfam PF01609 Transposase DDE domain 220 360 2.4E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 Gene3D G3DSA:1.10.246.40 2 65 1.5E-23 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 SUPERFAMILY SSF53098 1 460 3.34E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 Pfam PF14706 Transposase DNA-binding 9 65 2.3E-16 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 Gene3D G3DSA:1.10.740.10 348 458 2.9E-40 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 Gene3D G3DSA:3.90.350.10 66 347 1.0E-79 T 14-10-2018 IPR014736 Transposase, Tn5-like, core VAB027_194 2e2f248e3496fbd8f42f6b3976e93aeb 462 Pfam PF02281 Transposase Tn5 dimerisation domain 369 455 4.8E-17 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation VAB027_1106 9292f226794ba3a8dca11683c234d9d8 266 SUPERFAMILY SSF100950 1 262 4.19E-104 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_1106 9292f226794ba3a8dca11683c234d9d8 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VAB027_1106 9292f226794ba3a8dca11683c234d9d8 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.2E-140 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VAB027_1106 9292f226794ba3a8dca11683c234d9d8 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 223 1.0E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VAB027_1106 9292f226794ba3a8dca11683c234d9d8 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.267 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VAB027_1106 9292f226794ba3a8dca11683c234d9d8 266 Gene3D G3DSA:3.40.50.1360 1 266 1.8E-121 T 14-10-2018 VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 PIRSF PIRSF019169 1 330 1.5E-89 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 SUPERFAMILY SSF53067 185 326 9.55E-7 T 14-10-2018 VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 Gene3D G3DSA:3.30.1490.300 82 142 2.0E-49 T 14-10-2018 VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 Pfam PF11104 Type IV pilus assembly protein PilM; 239 328 1.9E-14 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 222 1.8E-35 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 329 9.5E-131 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 SUPERFAMILY SSF53067 5 165 7.54E-7 T 14-10-2018 VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 Gene3D G3DSA:3.30.420.40 8 327 2.0E-49 T 14-10-2018 VAB027_256 dbd31069cc9e386d3d73fa3616fad73d 338 Gene3D G3DSA:3.30.420.40 181 294 2.0E-49 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 SUPERFAMILY SSF51621 249 549 9.42E-111 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 Gene3D G3DSA:3.50.30.10 4 233 1.5E-80 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.2E-32 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 Gene3D G3DSA:1.10.274.10 21 146 1.5E-80 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 Gene3D G3DSA:3.20.20.60 234 573 1.4E-125 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 5.2E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 SUPERFAMILY SSF52009 125 243 7.06E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 PIRSF PIRSF000732 1 573 2.1E-220 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 14-10-2018 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 SUPERFAMILY SSF47831 24 143 3.53E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.3E-249 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VAB027_1654 20b17b2d2e30d5d935c0613c8c86c669 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.1E-124 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VAB027_3173 f1dcec807b335557dfd238ad5a3e28fe 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 3.2E-83 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAB027_3173 f1dcec807b335557dfd238ad5a3e28fe 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAB027_3173 f1dcec807b335557dfd238ad5a3e28fe 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.318 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAB027_3173 f1dcec807b335557dfd238ad5a3e28fe 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 261 1.3E-91 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAB027_1212 1600a00aaad87f590ed56460fedfbf76 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 2.6E-158 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VAB027_1212 1600a00aaad87f590ed56460fedfbf76 377 PIRSF PIRSF006078 1 377 2.1E-136 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VAB027_1212 1600a00aaad87f590ed56460fedfbf76 377 SUPERFAMILY SSF110738 1 375 3.27E-141 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VAB027_1212 1600a00aaad87f590ed56460fedfbf76 377 Gene3D G3DSA:3.40.50.10350 1 362 3.5E-140 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VAB027_1212 1600a00aaad87f590ed56460fedfbf76 377 Pfam PF02595 Glycerate kinase family 3 373 7.4E-148 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VAB027_1212 1600a00aaad87f590ed56460fedfbf76 377 Gene3D G3DSA:3.90.1510.10 42 276 3.5E-140 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.9E-190 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 Pfam PF01343 Peptidase family S49 138 294 3.2E-31 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 Pfam PF01343 Peptidase family S49 391 541 1.6E-45 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 4.6E-53 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 Gene3D G3DSA:3.90.226.10 315 539 6.2E-161 T 14-10-2018 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 SUPERFAMILY SSF52096 324 529 1.45E-42 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 SUPERFAMILY SSF52096 40 284 4.18E-27 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 Gene3D G3DSA:3.90.226.10 94 314 6.2E-161 T 14-10-2018 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 Gene3D G3DSA:3.40.1750.10 186 497 6.2E-161 T 14-10-2018 VAB027_2629 becbf78875dce236d4e7655e0d6699b8 616 PIRSF PIRSF001217 8 616 1.9E-221 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 Gene3D G3DSA:3.40.50.150 13 363 5.6E-139 T 14-10-2018 VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 3.3E-187 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 Gene3D G3DSA:3.40.1350.30 45 189 5.6E-139 T 14-10-2018 VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.049 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 4.7E-184 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VAB027_132 4e555779ccd2db8bb0b186cd90555769 369 SUPERFAMILY SSF53335 11 367 8.72E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Pfam PF00183 Hsp90 protein 227 632 3.9E-129 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 SUPERFAMILY SSF110942 520 631 4.58E-33 T 14-10-2018 IPR037196 HSP90, C-terminal domain VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 SUPERFAMILY SSF55874 10 219 2.62E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.2E-64 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 188 3.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.483 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Gene3D G3DSA:3.30.565.10 6 219 2.0E-77 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 SMART SM00387 32 189 1.8E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Gene3D G3DSA:3.30.230.80 237 404 4.3E-70 T 14-10-2018 VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Gene3D G3DSA:3.40.50.11260 405 494 4.1E-35 T 14-10-2018 VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 PIRSF PIRSF002583 1 635 6.4E-218 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 Gene3D G3DSA:1.20.120.790 500 632 9.6E-41 T 14-10-2018 IPR037196 HSP90, C-terminal domain VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VAB027_1672 57f00df37a8c92ffca240e5468af2576 635 SUPERFAMILY SSF54211 238 493 2.88E-99 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3576 6b53ec5cd9fefcd7322f8c532905d9b0 178 SUPERFAMILY SSF56925 30 178 8.63E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_3576 6b53ec5cd9fefcd7322f8c532905d9b0 178 Pfam PF13505 Outer membrane protein beta-barrel domain 16 178 2.5E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_3576 6b53ec5cd9fefcd7322f8c532905d9b0 178 Gene3D G3DSA:2.40.160.20 31 178 8.5E-14 T 14-10-2018 VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 SUPERFAMILY SSF46785 5 63 2.13E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.3E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 1.4E-39 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 Gene3D G3DSA:1.10.10.10 1 64 5.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 SMART SM01134 74 232 6.7E-43 T 14-10-2018 VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 SUPERFAMILY SSF100950 75 233 1.15E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_800 4dbb4065e2b6eaa505887c8c70fa4ed8 251 SMART SM00420 6 58 3.8E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_1638 c1bd504640478517786af856511a2755 263 Pfam PF05036 Sporulation related domain 188 256 1.2E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAB027_1638 c1bd504640478517786af856511a2755 263 SUPERFAMILY SSF50685 78 167 1.99E-11 T 14-10-2018 IPR036908 RlpA-like domain superfamily VAB027_1638 c1bd504640478517786af856511a2755 263 SUPERFAMILY SSF110997 187 256 7.59E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_1638 c1bd504640478517786af856511a2755 263 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 173 3.1E-46 T 14-10-2018 IPR012997 Rare lipoprotein A VAB027_1638 c1bd504640478517786af856511a2755 263 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 169 25.674 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VAB027_1638 c1bd504640478517786af856511a2755 263 Gene3D G3DSA:3.30.70.1070 187 257 3.6E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_1638 c1bd504640478517786af856511a2755 263 Gene3D G3DSA:2.40.40.10 76 170 1.3E-39 T 14-10-2018 IPR036908 RlpA-like domain superfamily VAB027_1638 c1bd504640478517786af856511a2755 263 Pfam PF03330 Lytic transglycolase 77 166 1.0E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 PIRSF PIRSF000876 1 346 2.0E-124 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 Gene3D G3DSA:3.40.50.2300 1 133 6.6E-32 T 14-10-2018 VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 SUPERFAMILY SSF52172 1 110 4.55E-29 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 Pfam PF01339 CheB methylesterase 158 335 2.5E-53 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 SUPERFAMILY SSF52738 153 343 2.75E-63 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 37.013 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 Pfam PF00072 Response regulator receiver domain 6 111 9.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 SMART SM00448 4 120 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1043 13c6d9eed12bbd72cc51022176d9c46a 346 Gene3D G3DSA:3.40.50.180 148 346 7.9E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 SUPERFAMILY SSF82866 790 1026 9.16E-49 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:1.20.1640.10 510 1018 7.9E-258 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 SUPERFAMILY SSF82714 184 264 3.79E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:3.30.70.1440 652 849 7.9E-258 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:3.30.2090.10 178 268 7.9E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 SUPERFAMILY SSF82866 289 491 8.5E-40 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 SUPERFAMILY SSF82693 41 132 1.83E-22 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:3.30.70.1430 565 651 7.9E-258 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 5.5E-172 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:1.20.1640.10 12 509 7.9E-258 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:3.30.70.1320 135 327 7.9E-258 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 SUPERFAMILY SSF82714 707 786 1.7E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:3.30.2090.10 703 791 7.9E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 Gene3D G3DSA:3.30.70.1430 41 799 7.9E-258 T 14-10-2018 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.2E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.2E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_3220 ea35a6a9491638477157b405ed42c1be 1039 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.2E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 226 232 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 Pfam PF02384 N-6 DNA Methylase 101 235 4.9E-5 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 SUPERFAMILY SSF53335 100 367 4.63E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 291 315 5.5E-12 T 14-10-2018 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 108 124 5.5E-12 T 14-10-2018 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 134 148 5.5E-12 T 14-10-2018 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 223 235 5.5E-12 T 14-10-2018 VAB027_1235 5c0963e421b5ff25a60049dab32382af 743 Gene3D G3DSA:3.40.50.150 111 382 9.1E-28 T 14-10-2018 VAB027_977 437a65b771eea0cdc87edd09d4d7d301 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 407 5.5E-131 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VAB027_977 437a65b771eea0cdc87edd09d4d7d301 408 Pfam PF03616 Sodium/glutamate symporter 5 376 1.4E-156 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VAB027_977 437a65b771eea0cdc87edd09d4d7d301 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.801 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VAB027_3609 01847584899a3f2f86545ca6d0275c8e 373 Gene3D G3DSA:1.10.287.210 217 315 9.1E-20 T 14-10-2018 VAB027_3609 01847584899a3f2f86545ca6d0275c8e 373 Gene3D G3DSA:3.30.1890.10 53 216 2.3E-29 T 14-10-2018 VAB027_3609 01847584899a3f2f86545ca6d0275c8e 373 Pfam PF13807 G-rich domain on putative tyrosine kinase 328 364 2.7E-7 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VAB027_3609 01847584899a3f2f86545ca6d0275c8e 373 SUPERFAMILY SSF160355 63 334 1.44E-63 T 14-10-2018 VAB027_3609 01847584899a3f2f86545ca6d0275c8e 373 Pfam PF02706 Chain length determinant protein 24 106 3.3E-18 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SMART SM00387 394 510 3.9E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SUPERFAMILY SSF55874 336 507 7.86E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SUPERFAMILY SSF52172 526 646 5.41E-25 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SMART SM00448 527 638 9.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SUPERFAMILY SSF47384 270 347 2.35E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SUPERFAMILY SSF55785 140 267 5.23E-24 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2999 3118791ebfb7012e67002116cd52d410 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Gene3D G3DSA:3.30.565.10 349 511 5.4E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Gene3D G3DSA:3.30.450.20 142 272 3.6E-24 T 14-10-2018 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 PIRSF PIRSF003182 1 783 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Pfam PF00989 PAS fold 157 266 8.3E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Gene3D G3DSA:3.40.50.2300 514 650 2.5E-27 T 14-10-2018 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Gene3D G3DSA:1.20.120.160 663 783 1.2E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SMART SM00388 282 347 6.5E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SMART SM00073 680 777 6.6E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SUPERFAMILY SSF47226 668 779 1.57E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Pfam PF01627 Hpt domain 692 762 7.9E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Gene3D G3DSA:1.10.287.970 1 89 3.2E-38 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VAB027_2999 3118791ebfb7012e67002116cd52d410 785 SMART SM00091 155 221 3.7E-8 T 14-10-2018 IPR000014 PAS domain VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Pfam PF00072 Response regulator receiver domain 529 638 2.0E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2999 3118791ebfb7012e67002116cd52d410 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 7.7E-18 T 14-10-2018 IPR000014 PAS domain VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2999 3118791ebfb7012e67002116cd52d410 785 Gene3D G3DSA:1.10.287.130 273 348 1.7E-19 T 14-10-2018 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 Pfam PF00654 Voltage gated chloride channel 87 435 3.3E-95 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 Gene3D G3DSA:1.10.3080.10 15 459 3.5E-144 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 PRINTS PR00762 Chloride channel signature 403 422 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 PRINTS PR00762 Chloride channel signature 181 200 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 PRINTS PR00762 Chloride channel signature 350 370 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 PRINTS PR00762 Chloride channel signature 100 117 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 PRINTS PR00762 Chloride channel signature 385 401 1.9E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 49.536 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VAB027_634 2a474c178c8b7989ff3d2a290e21f088 468 SUPERFAMILY SSF81340 25 451 2.75E-115 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 Gene3D G3DSA:1.10.1900.20 56 117 7.9E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 SUPERFAMILY SSF74731 2 116 1.7E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 Gene3D G3DSA:1.10.720.90 2 55 4.2E-25 T 14-10-2018 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 7.0E-22 T 14-10-2018 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.787 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 Pfam PF00453 Ribosomal protein L20 3 108 4.3E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_769 283a469141a3d2bf42a207d6dd769034 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1002 885f41a8a0a99715606de014f5da7c30 1219 SMART SM00257 5 51 7.0E-10 T 14-10-2018 IPR018392 LysM domain VAB027_1002 885f41a8a0a99715606de014f5da7c30 1219 Gene3D G3DSA:3.10.350.10 1 59 9.3E-13 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_1002 885f41a8a0a99715606de014f5da7c30 1219 SUPERFAMILY SSF54106 5 51 5.36E-7 T 14-10-2018 VAB027_1002 885f41a8a0a99715606de014f5da7c30 1219 Pfam PF01476 LysM domain 6 51 1.0E-8 T 14-10-2018 IPR018392 LysM domain VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 SMART SM00359 3 87 8.1E-8 T 14-10-2018 IPR002478 PUA domain GO:0003723 VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 SUPERFAMILY SSF88697 3 72 4.72E-17 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 Gene3D G3DSA:2.30.130.10 2 71 3.8E-27 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 SUPERFAMILY SSF53335 78 393 3.14E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 Gene3D G3DSA:3.40.50.150 181 396 1.5E-68 T 14-10-2018 VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 Gene3D G3DSA:3.30.750.80 72 180 1.1E-36 T 14-10-2018 VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 376 4.4E-29 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VAB027_2031 b5a39241c73ab94355c2faea9f61a982 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.274 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 VAB027_3192 1e8d0c73afddb859b2fbc03ae3e82fd6 175 Gene3D G3DSA:3.30.1050.10 26 140 8.7E-7 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VAB027_3192 1e8d0c73afddb859b2fbc03ae3e82fd6 175 SUPERFAMILY SSF55718 42 139 1.01E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VAB027_3192 1e8d0c73afddb859b2fbc03ae3e82fd6 175 Pfam PF02036 SCP-2 sterol transfer family 44 134 3.4E-18 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VAB027_3192 1e8d0c73afddb859b2fbc03ae3e82fd6 175 PIRSF PIRSF025550 1 174 1.6E-85 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 SUPERFAMILY SSF52283 1 360 2.21E-67 T 14-10-2018 VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 Gene3D G3DSA:3.40.50.720 130 305 1.3E-136 T 14-10-2018 VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 SUPERFAMILY SSF51735 137 303 1.37E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 SMART SM01002 149 297 1.2E-87 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 Gene3D G3DSA:3.40.50.720 3 353 1.3E-136 T 14-10-2018 VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.0E-156 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 SMART SM01003 4 137 8.9E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 9.9E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.6E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAB027_2550 b9d0c34fa3a52ad1efd7eb7328d77944 374 PIRSF PIRSF000183 1 371 1.3E-156 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VAB027_3602 e0040fddfa0a3c857e9e85c43acc1833 357 Gene3D G3DSA:3.20.20.70 1 288 3.6E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3602 e0040fddfa0a3c857e9e85c43acc1833 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 2.2E-152 T 14-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 VAB027_3602 e0040fddfa0a3c857e9e85c43acc1833 357 SUPERFAMILY SSF51269 295 356 4.55E-17 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 VAB027_3602 e0040fddfa0a3c857e9e85c43acc1833 357 Gene3D G3DSA:3.90.1210.10 292 357 3.6E-19 T 14-10-2018 VAB027_3602 e0040fddfa0a3c857e9e85c43acc1833 357 Pfam PF03102 NeuB family 22 289 6.2E-99 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 VAB027_3602 e0040fddfa0a3c857e9e85c43acc1833 357 SUPERFAMILY SSF51569 2 313 2.0E-78 T 14-10-2018 VAB027_538 05dc029096f4e87bedf4fa5060c95e12 448 SUPERFAMILY SSF52540 28 325 1.43E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_538 05dc029096f4e87bedf4fa5060c95e12 448 Pfam PF13175 AAA ATPase domain 22 429 9.7E-13 T 14-10-2018 VAB027_538 05dc029096f4e87bedf4fa5060c95e12 448 SUPERFAMILY SSF52540 16 435 2.75E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2234 c954159bfcc5fe45e288d4e4bdaf424c 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 4.2E-83 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VAB027_2234 c954159bfcc5fe45e288d4e4bdaf424c 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 260 4.8E-106 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VAB027_2234 c954159bfcc5fe45e288d4e4bdaf424c 261 SUPERFAMILY SSF117856 30 260 7.32E-84 T 14-10-2018 VAB027_2234 c954159bfcc5fe45e288d4e4bdaf424c 261 Gene3D G3DSA:3.30.1330.80 31 247 1.4E-79 T 14-10-2018 VAB027_2234 c954159bfcc5fe45e288d4e4bdaf424c 261 Gene3D G3DSA:3.30.1330.80 106 228 1.4E-79 T 14-10-2018 VAB027_2234 c954159bfcc5fe45e288d4e4bdaf424c 261 PIRSF PIRSF001332 13 261 1.9E-97 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VAB027_1014 b6356163c3cc449f961ca341f676a46e 239 Gene3D G3DSA:1.10.10.200 17 78 8.9E-18 T 14-10-2018 IPR017856 Integrase-like, N-terminal VAB027_1014 b6356163c3cc449f961ca341f676a46e 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 28.674 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_1014 b6356163c3cc449f961ca341f676a46e 239 Pfam PF01709 Transcriptional regulator 5 236 1.0E-74 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_1014 b6356163c3cc449f961ca341f676a46e 239 Gene3D G3DSA:3.30.70.980 83 235 8.3E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_1014 b6356163c3cc449f961ca341f676a46e 239 SUPERFAMILY SSF75625 1 238 2.22E-77 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_1014 b6356163c3cc449f961ca341f676a46e 239 Gene3D G3DSA:3.30.70.980 131 202 8.3E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.669 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 Gene3D G3DSA:3.30.60.20 144 189 4.4E-8 T 14-10-2018 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 Gene3D G3DSA:3.40.50.300 2 140 8.7E-24 T 14-10-2018 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 Pfam PF00265 Thymidine kinase 2 186 1.2E-58 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 SUPERFAMILY SSF57716 142 189 1.19E-16 T 14-10-2018 VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 SUPERFAMILY SSF52540 2 141 8.93E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1847 b0d9776a707c3eecdd0571bb18c55d16 192 PIRSF PIRSF035805 1 191 3.7E-56 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAB027_2615 0edd4db4d51f76cc8f101ba1b312128e 200 SMART SM01144 1 190 1.1E-67 T 14-10-2018 IPR005636 DTW VAB027_2615 0edd4db4d51f76cc8f101ba1b312128e 200 Pfam PF03942 DTW domain 3 185 6.9E-50 T 14-10-2018 IPR005636 DTW VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 PIRSF PIRSF000676 1 316 9.7E-80 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 SUPERFAMILY SSF55060 178 294 3.96E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 Gene3D G3DSA:3.30.70.890 174 283 8.1E-90 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 Gene3D G3DSA:3.30.230.10 5 173 8.1E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 PRINTS PR00958 Homoserine kinase signature 181 198 1.6E-31 T 14-10-2018 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 PRINTS PR00958 Homoserine kinase signature 260 275 1.6E-31 T 14-10-2018 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 PRINTS PR00958 Homoserine kinase signature 143 156 1.6E-31 T 14-10-2018 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 PRINTS PR00958 Homoserine kinase signature 103 118 1.6E-31 T 14-10-2018 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 PRINTS PR00958 Homoserine kinase signature 10 25 1.6E-31 T 14-10-2018 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 28.707 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 Pfam PF08544 GHMP kinases C terminal 223 291 7.6E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 8.1E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 SUPERFAMILY SSF54211 3 191 8.35E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_2993 4bd8eb5ddc0864365af0f70fca7f36fc 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 4.5E-108 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 Pfam PF00072 Response regulator receiver domain 3 113 1.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 SMART SM00448 1 112 1.4E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 SUPERFAMILY SSF46894 122 221 3.4E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 SMART SM00862 146 221 2.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 SUPERFAMILY SSF52172 1 118 2.28E-37 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 Gene3D G3DSA:1.10.10.10 123 224 8.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-38 T 14-10-2018 VAB027_808 8c4ab32b69206ba2c26ff6e67b7978ed 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 2.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2994 b6409413ca724475899040785353c0e7 819 Gene3D G3DSA:3.30.360.10 625 795 2.4E-122 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 SUPERFAMILY SSF55021 303 381 1.43E-20 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 Pfam PF01842 ACT domain 324 375 1.5E-7 T 14-10-2018 IPR002912 ACT domain VAB027_2994 b6409413ca724475899040785353c0e7 819 SUPERFAMILY SSF53633 1 298 1.97E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2994 b6409413ca724475899040785353c0e7 819 Pfam PF13840 ACT domain 393 456 7.9E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain VAB027_2994 b6409413ca724475899040785353c0e7 819 Gene3D G3DSA:1.20.120.1320 41 142 2.2E-86 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAB027_2994 b6409413ca724475899040785353c0e7 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 6.6E-27 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VAB027_2994 b6409413ca724475899040785353c0e7 819 SUPERFAMILY SSF55021 383 476 2.52E-21 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 SUPERFAMILY SSF51735 463 636 8.86E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2994 b6409413ca724475899040785353c0e7 819 Gene3D G3DSA:3.40.50.720 467 811 2.4E-122 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 Gene3D G3DSA:3.40.1160.10 3 295 2.2E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2994 b6409413ca724475899040785353c0e7 819 Pfam PF00696 Amino acid kinase family 2 284 3.6E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_2994 b6409413ca724475899040785353c0e7 819 SUPERFAMILY SSF55347 614 797 1.9E-50 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2994 b6409413ca724475899040785353c0e7 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 8.2E-130 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2994 b6409413ca724475899040785353c0e7 819 Gene3D G3DSA:3.30.2130.10 302 464 5.6E-43 T 14-10-2018 VAB027_2994 b6409413ca724475899040785353c0e7 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_2994 b6409413ca724475899040785353c0e7 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.6E-49 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 Pfam PF13401 AAA domain 104 220 2.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 Gene3D G3DSA:1.10.260.40 11 71 1.6E-12 T 14-10-2018 VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 SUPERFAMILY SSF47681 234 313 2.88E-24 T 14-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 SUPERFAMILY SSF52540 99 258 2.31E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 Gene3D G3DSA:3.40.50.300 72 213 4.7E-8 T 14-10-2018 VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 Gene3D G3DSA:1.10.1180.10 234 314 9.3E-24 T 14-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 VAB027_1557 94b2ef1bcaa6d21ab69738aba57d3ea6 314 Pfam PF09077 Mu B transposition protein, C terminal 235 310 3.7E-22 T 14-10-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 VAB027_2100 86cf88348e352df719b1bac3f66ccaec 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 3.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2100 86cf88348e352df719b1bac3f66ccaec 285 SUPERFAMILY SSF161098 9 274 1.44E-54 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2100 86cf88348e352df719b1bac3f66ccaec 285 Gene3D G3DSA:1.10.3720.10 6 277 8.1E-54 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_363 67c332526df4d17c4dafb498936c8ece 473 SUPERFAMILY SSF55021 398 461 4.49E-7 T 14-10-2018 VAB027_363 67c332526df4d17c4dafb498936c8ece 473 Gene3D G3DSA:3.40.1160.10 3 307 1.7E-56 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_363 67c332526df4d17c4dafb498936c8ece 473 Gene3D G3DSA:3.30.70.260 318 460 2.1E-6 T 14-10-2018 VAB027_363 67c332526df4d17c4dafb498936c8ece 473 SUPERFAMILY SSF53633 4 306 9.77E-54 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_363 67c332526df4d17c4dafb498936c8ece 473 Gene3D G3DSA:3.30.70.260 325 394 2.1E-6 T 14-10-2018 VAB027_363 67c332526df4d17c4dafb498936c8ece 473 Pfam PF00696 Amino acid kinase family 4 293 1.4E-23 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_1269 fdd2978c4fe75630e2c4b15a6032f1c7 609 Pfam PF00884 Sulfatase 249 524 1.3E-32 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAB027_1269 fdd2978c4fe75630e2c4b15a6032f1c7 609 PIRSF PIRSF004950 1 609 1.3E-237 T 14-10-2018 IPR012159 Inner membrane protein YejM VAB027_1269 fdd2978c4fe75630e2c4b15a6032f1c7 609 SUPERFAMILY SSF53649 245 575 2.49E-60 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAB027_1269 fdd2978c4fe75630e2c4b15a6032f1c7 609 Gene3D G3DSA:3.40.720.10 241 535 9.3E-57 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAB027_1269 fdd2978c4fe75630e2c4b15a6032f1c7 609 Pfam PF11893 Domain of unknown function (DUF3413) 4 241 3.7E-66 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VAB027_1877 fa848736ae01f167e62434710a6a020f 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 2.0E-20 T 14-10-2018 VAB027_1877 fa848736ae01f167e62434710a6a020f 153 Pfam PF04191 Phospholipid methyltransferase 44 142 1.8E-10 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VAB027_1877 fa848736ae01f167e62434710a6a020f 153 Gene3D G3DSA:1.20.120.1630 3 153 6.7E-22 T 14-10-2018 VAB027_1698 8250ec0de6f9f9d7f0d7c5970fc4e494 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.8E-107 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VAB027_1698 8250ec0de6f9f9d7f0d7c5970fc4e494 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.263 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VAB027_1698 8250ec0de6f9f9d7f0d7c5970fc4e494 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 3.0E-147 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 1.9E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 SUPERFAMILY SSF51971 145 399 2.53E-69 T 14-10-2018 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 3.1E-251 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.4E-36 T 14-10-2018 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.4E-36 T 14-10-2018 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.4E-36 T 14-10-2018 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.4E-36 T 14-10-2018 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.4E-36 T 14-10-2018 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 SUPERFAMILY SSF46548 6 157 8.89E-42 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 Gene3D G3DSA:3.50.50.60 147 235 1.3E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 Gene3D G3DSA:3.50.50.60 247 398 7.2E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 Gene3D G3DSA:1.10.1060.10 12 146 1.7E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAB027_3006 b15b325dbaff6a154eef689057e7d381 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.4E-38 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 431 449 2.6E-39 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 504 2.6E-39 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 587 2.6E-39 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 534 2.6E-39 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 457 481 2.6E-39 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 612 2.6E-39 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 Gene3D G3DSA:2.130.10.120 73 392 5.9E-150 T 14-10-2018 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 SUPERFAMILY SSF53474 402 651 4.35E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 23 384 4.5E-31 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 Gene3D G3DSA:3.40.50.1820 23 653 5.9E-150 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 SUPERFAMILY SSF50993 22 389 2.54E-24 T 14-10-2018 VAB027_962 a40e8f977aac4105d4b78435db87d03d 665 Pfam PF00326 Prolyl oligopeptidase family 446 656 1.3E-60 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VAB027_525 b9125e6fc4f31da8afd79b09977e09df 139 Pfam PF04143 Sulphur transport 3 129 1.3E-11 T 14-10-2018 IPR007272 Sulphur transport domain VAB027_1736 5393416f53eac0d3c3aa1da67a864205 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 8.4E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAB027_1736 5393416f53eac0d3c3aa1da67a864205 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.506 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAB027_1736 5393416f53eac0d3c3aa1da67a864205 109 SUPERFAMILY SSF82607 11 103 1.12E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VAB027_1736 5393416f53eac0d3c3aa1da67a864205 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 2.7E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAB027_1736 5393416f53eac0d3c3aa1da67a864205 109 PIRSF PIRSF004555 3 109 4.5E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAB027_1736 5393416f53eac0d3c3aa1da67a864205 109 Gene3D G3DSA:3.30.1310.10 1 109 3.4E-48 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VAB027_3202 e830100a7e033beca3e41167194477d4 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.738 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAB027_3202 e830100a7e033beca3e41167194477d4 132 Pfam PF02033 Ribosome-binding factor A 7 110 2.3E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAB027_3202 e830100a7e033beca3e41167194477d4 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VAB027_3202 e830100a7e033beca3e41167194477d4 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 8.0E-47 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAB027_3202 e830100a7e033beca3e41167194477d4 132 SUPERFAMILY SSF89919 2 105 1.57E-31 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VAB027_3202 e830100a7e033beca3e41167194477d4 132 Gene3D G3DSA:3.30.300.20 1 106 1.1E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_3202 e830100a7e033beca3e41167194477d4 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 115 2.7E-34 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAB027_3260 bc16cd7ee7683b188e49207d7273f6ea 177 SUPERFAMILY SSF53271 3 174 2.36E-55 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_3260 bc16cd7ee7683b188e49207d7273f6ea 177 Pfam PF00156 Phosphoribosyl transferase domain 12 159 5.4E-28 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAB027_3260 bc16cd7ee7683b188e49207d7273f6ea 177 Gene3D G3DSA:3.40.50.2020 1 176 1.9E-65 T 14-10-2018 VAB027_3260 bc16cd7ee7683b188e49207d7273f6ea 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 7.4E-75 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Pfam PF13932 GidA associated domain 403 616 4.4E-75 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Gene3D G3DSA:1.10.10.1800 459 550 1.7E-29 T 14-10-2018 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 SUPERFAMILY SSF51905 6 261 2.09E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Pfam PF01134 Glucose inhibited division protein A 8 399 3.7E-170 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Gene3D G3DSA:3.50.50.60 1 232 6.9E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Gene3D G3DSA:3.50.50.60 296 458 2.8E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.43 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 SMART SM01228 546 617 5.8E-42 T 14-10-2018 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 Gene3D G3DSA:1.10.150.570 569 622 1.4E-22 T 14-10-2018 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VAB027_3729 0b73fb4f47928a7f52cb1776f85e9a89 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.3E-292 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VAB027_2281 11b0ae40bace1b7baab93e11f9bdcb1c 401 SUPERFAMILY SSF103473 11 399 9.29E-66 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2281 11b0ae40bace1b7baab93e11f9bdcb1c 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 395 1.7E-118 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VAB027_2281 11b0ae40bace1b7baab93e11f9bdcb1c 401 Gene3D G3DSA:1.20.1720.10 18 396 1.5E-100 T 14-10-2018 VAB027_2281 11b0ae40bace1b7baab93e11f9bdcb1c 401 Pfam PF07690 Major Facilitator Superfamily 25 365 1.4E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_354 375a7fcb6e9025320422c4e28172821f 192 SUPERFAMILY SSF53335 5 192 2.63E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_354 375a7fcb6e9025320422c4e28172821f 192 Gene3D G3DSA:3.40.50.150 1 179 1.1E-24 T 14-10-2018 VAB027_354 375a7fcb6e9025320422c4e28172821f 192 Pfam PF13489 Methyltransferase domain 35 147 9.7E-12 T 14-10-2018 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 Gene3D G3DSA:3.30.1130.10 21 138 3.5E-47 T 14-10-2018 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 Pfam PF14489 QueF-like protein 194 270 4.9E-27 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.133 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 4.4E-49 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 Gene3D G3DSA:3.30.1130.10 143 281 6.8E-65 T 14-10-2018 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 SUPERFAMILY SSF55620 184 265 1.78E-9 T 14-10-2018 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 PIRSF PIRSF004750 6 281 6.6E-130 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAB027_1538 cfacca3481bb7bc670dbadfba544ef22 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.9E-129 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAB027_1849 89884a2459306781ffc3429ed9cbe863 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_1849 89884a2459306781ffc3429ed9cbe863 268 SUPERFAMILY SSF51366 1 266 8.01E-92 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_1849 89884a2459306781ffc3429ed9cbe863 268 Gene3D G3DSA:3.20.20.70 1 268 8.4E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1849 89884a2459306781ffc3429ed9cbe863 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.6E-102 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_1849 89884a2459306781ffc3429ed9cbe863 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.678 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_1849 89884a2459306781ffc3429ed9cbe863 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.0E-97 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAB027_2982 89f479dff2fd996f30996801ae154f69 418 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_2982 89f479dff2fd996f30996801ae154f69 418 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 415 1.5E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VAB027_2982 89f479dff2fd996f30996801ae154f69 418 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 415 4.9E-151 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VAB027_2982 89f479dff2fd996f30996801ae154f69 418 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.3E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VAB027_304 f91a1c18f645519028f73579211f13cd 4236 SMART SM00487 1907 2188 6.7E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_304 f91a1c18f645519028f73579211f13cd 4236 Pfam PF07669 Eco57I restriction-modification methylase 1241 1309 7.4E-5 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 VAB027_304 f91a1c18f645519028f73579211f13cd 4236 SUPERFAMILY SSF52540 1878 2202 6.32E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_304 f91a1c18f645519028f73579211f13cd 4236 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1244 1250 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_304 f91a1c18f645519028f73579211f13cd 4236 SMART SM00490 2461 2551 0.0032 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_304 f91a1c18f645519028f73579211f13cd 4236 Pfam PF00176 SNF2 family N-terminal domain 1924 2191 6.8E-9 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VAB027_304 f91a1c18f645519028f73579211f13cd 4236 SUPERFAMILY SSF52540 2097 2615 4.26E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_304 f91a1c18f645519028f73579211f13cd 4236 Gene3D G3DSA:3.40.50.300 2438 2599 5.7E-13 T 14-10-2018 VAB027_304 f91a1c18f645519028f73579211f13cd 4236 Gene3D G3DSA:3.40.50.150 1155 1356 1.6E-19 T 14-10-2018 VAB027_304 f91a1c18f645519028f73579211f13cd 4236 SUPERFAMILY SSF53335 1118 1356 7.3E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 Hamap MF_00297 NADH pyrophosphatase [nudC]. 2 258 44.147 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 Gene3D G3DSA:3.90.79.20 1 126 4.0E-35 T 14-10-2018 VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 97 125 2.3E-9 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 Gene3D G3DSA:3.90.79.10 127 257 5.9E-40 T 14-10-2018 VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 SUPERFAMILY SSF55811 59 244 1.17E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 Pfam PF00293 NUDIX domain 133 234 1.6E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_3510 ada35acc0613bf26d64d75ef9790a6b2 258 ProSitePatterns PS00893 Nudix box signature. 160 181 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_2709 20dfe4242dbe9b1c7b876fff29bb9a8f 198 SUPERFAMILY SSF54593 1 196 2.98E-67 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2709 20dfe4242dbe9b1c7b876fff29bb9a8f 198 Gene3D G3DSA:3.10.180.10 4 198 1.1E-64 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2709 20dfe4242dbe9b1c7b876fff29bb9a8f 198 Pfam PF06185 YecM protein 13 196 2.5E-67 T 14-10-2018 IPR010393 Protein of unknown function DUF991 VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 Pfam PF01668 SmpB protein 15 157 8.2E-57 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 3.0E-61 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.8E-53 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 Gene3D G3DSA:2.40.280.10 7 136 7.0E-45 T 14-10-2018 IPR023620 Small protein B VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 SUPERFAMILY SSF74982 9 139 6.8E-49 T 14-10-2018 IPR023620 Small protein B VAB027_1490 816f06c70461a3de0b197e440853a2c6 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 71.106 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAB027_3075 603c56279a08d2e59657c6c87439b907 545 Gene3D G3DSA:3.40.50.300 1 285 5.4E-134 T 14-10-2018 VAB027_3075 603c56279a08d2e59657c6c87439b907 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.0E-62 T 14-10-2018 IPR017926 Glutamine amidotransferase VAB027_3075 603c56279a08d2e59657c6c87439b907 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.212 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VAB027_3075 603c56279a08d2e59657c6c87439b907 545 Pfam PF06418 CTP synthase N-terminus 5 265 1.1E-124 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VAB027_3075 603c56279a08d2e59657c6c87439b907 545 SUPERFAMILY SSF52317 289 539 5.47E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_3075 603c56279a08d2e59657c6c87439b907 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 5.3E-260 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VAB027_3075 603c56279a08d2e59657c6c87439b907 545 SUPERFAMILY SSF52540 3 269 1.68E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3075 603c56279a08d2e59657c6c87439b907 545 Gene3D G3DSA:3.40.50.880 286 543 4.7E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1382 e00bdec3efbdf381d30f1ef818fbd6ba 317 Gene3D G3DSA:3.40.190.10 112 254 4.7E-100 T 14-10-2018 VAB027_1382 e00bdec3efbdf381d30f1ef818fbd6ba 317 Pfam PF12849 PBP superfamily domain 26 282 4.9E-31 T 14-10-2018 IPR024370 PBP domain VAB027_1382 e00bdec3efbdf381d30f1ef818fbd6ba 317 Gene3D G3DSA:3.40.190.10 27 298 4.7E-100 T 14-10-2018 VAB027_1382 e00bdec3efbdf381d30f1ef818fbd6ba 317 SUPERFAMILY SSF53850 25 307 2.94E-66 T 14-10-2018 VAB027_1382 e00bdec3efbdf381d30f1ef818fbd6ba 317 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 295 1.2E-73 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VAB027_1237 4c3fc97f1b0cbc4a880a0f0b7cd84958 82 SUPERFAMILY SSF53098 4 79 2.58E-12 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1237 4c3fc97f1b0cbc4a880a0f0b7cd84958 82 Pfam PF00665 Integrase core domain 5 78 3.9E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAB027_2378 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2378 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VAB027_2378 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2378 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VAB027_2378 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VAB027_2378 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 14-10-2018 VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 66 79 2.6E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 52 65 2.6E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 3 21 2.6E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 SUPERFAMILY SSF52833 3 82 1.54E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 Gene3D G3DSA:3.40.30.10 1 85 1.2E-25 T 14-10-2018 VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 Pfam PF00462 Glutaredoxin 3 69 1.6E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAB027_1827 19945741b7ab4947aad25a1852c7a832 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.7E-49 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 Pfam PF12848 ABC transporter 224 309 9.1E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 SUPERFAMILY SSF52540 7 237 1.54E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 Gene3D G3DSA:3.40.50.300 2 281 1.6E-55 T 14-10-2018 VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 SUPERFAMILY SSF52540 333 517 1.65E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 SMART SM00382 343 511 7.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 SMART SM00382 26 238 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 Pfam PF00005 ABC transporter 336 466 1.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 Gene3D G3DSA:3.40.50.300 282 529 2.3E-52 T 14-10-2018 VAB027_2166 e43ca0ebcfbf484ad37824a5cda7206f 530 Pfam PF00005 ABC transporter 18 184 1.7E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_908 45cb512a5a8470739a9116b4cca4333e 420 Pfam PF06812 ImpA, N-terminal, type VI secretion system 25 99 2.1E-8 T 14-10-2018 IPR010657 ImpA, N-terminal VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 SUPERFAMILY SSF46785 16 160 1.25E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 SMART SM00347 42 145 2.2E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 Pfam PF12802 MarR family 48 108 1.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1169 19e2df5cc34dbfeb2fe40cdebfa7494f 175 Gene3D G3DSA:1.10.10.10 2 160 8.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3552 56063943f4224e2c0deb9e346e50fa1c 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.919 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VAB027_3552 56063943f4224e2c0deb9e346e50fa1c 295 SUPERFAMILY SSF53335 43 273 8.51E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3552 56063943f4224e2c0deb9e346e50fa1c 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.8E-104 T 14-10-2018 VAB027_3552 56063943f4224e2c0deb9e346e50fa1c 295 PIRSF PIRSF000401 1 295 9.0E-103 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VAB027_3552 56063943f4224e2c0deb9e346e50fa1c 295 Gene3D G3DSA:3.40.50.150 102 294 1.5E-58 T 14-10-2018 VAB027_3552 56063943f4224e2c0deb9e346e50fa1c 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 6.1E-110 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VAB027_1035 aa66517fb820a129b766396a0d02021f 89 Gene3D G3DSA:3.30.750.24 1 89 6.0E-11 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_1035 aa66517fb820a129b766396a0d02021f 89 Pfam PF13466 STAS domain 4 80 5.3E-17 T 14-10-2018 IPR002645 STAS domain VAB027_1035 aa66517fb820a129b766396a0d02021f 89 SUPERFAMILY SSF52091 2 85 1.31E-13 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_248 c1a4e1831f517c4ec668b715f09cea17 262 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 43.339 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_248 c1a4e1831f517c4ec668b715f09cea17 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 3.0E-64 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_248 c1a4e1831f517c4ec668b715f09cea17 262 SUPERFAMILY SSF53633 9 262 9.82E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_248 c1a4e1831f517c4ec668b715f09cea17 262 Pfam PF00696 Amino acid kinase family 9 238 4.4E-35 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_248 c1a4e1831f517c4ec668b715f09cea17 262 PIRSF PIRSF000728 1 261 3.9E-70 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAB027_248 c1a4e1831f517c4ec668b715f09cea17 262 Gene3D G3DSA:3.40.1160.10 5 260 4.4E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 SUPERFAMILY SSF46689 359 457 6.57E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Gene3D G3DSA:1.10.8.60 318 397 4.0E-22 T 14-10-2018 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Gene3D G3DSA:3.40.50.2300 2 144 2.1E-33 T 14-10-2018 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Pfam PF00072 Response regulator receiver domain 13 122 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Gene3D G3DSA:1.10.10.60 412 456 7.8E-10 T 14-10-2018 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 SMART SM00448 11 122 2.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 SUPERFAMILY SSF52172 12 190 2.85E-41 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 1.1E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 SUPERFAMILY SSF52540 146 389 7.72E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 SMART SM00382 166 309 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Pfam PF00158 Sigma-54 interaction domain 147 312 7.0E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_1704 2bd9103cf8fdfebbead4586d8d8ab9e2 469 Gene3D G3DSA:3.40.50.300 145 317 1.3E-63 T 14-10-2018 VAB027_2011 b313e565417d16c973bd6cc5eae1091e 323 Gene3D G3DSA:3.40.190.10 123 249 8.8E-63 T 14-10-2018 VAB027_2011 b313e565417d16c973bd6cc5eae1091e 323 SUPERFAMILY SSF53850 108 290 2.26E-10 T 14-10-2018 VAB027_2011 b313e565417d16c973bd6cc5eae1091e 323 Gene3D G3DSA:3.40.190.150 29 314 8.8E-63 T 14-10-2018 VAB027_2011 b313e565417d16c973bd6cc5eae1091e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 70 320 2.5E-23 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VAB027_2011 b313e565417d16c973bd6cc5eae1091e 323 PIRSF PIRSF017082 4 323 1.7E-85 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 SMART SM00862 145 216 8.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 Pfam PF00072 Response regulator receiver domain 4 112 8.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 SMART SM00448 1 112 1.9E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 SUPERFAMILY SSF52172 1 130 1.99E-35 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-35 T 14-10-2018 VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 Gene3D G3DSA:1.10.10.10 123 218 6.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1028 13af459ed37db38889a1218e71bd36e7 218 SUPERFAMILY SSF46894 118 216 1.96E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_722 3618ce673db932631bab8c1fd049f040 121 Pfam PF11948 Protein of unknown function (DUF3465) 11 121 5.2E-53 T 14-10-2018 IPR021856 Protein of unknown function DUF3465 VAB027_1705 ee5333ec71e30a96ea3d7d6f6db056db 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 287 1.7E-75 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VAB027_1705 ee5333ec71e30a96ea3d7d6f6db056db 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 31.176 T 14-10-2018 IPR010119 Gluconeogenesis factor VAB027_1705 ee5333ec71e30a96ea3d7d6f6db056db 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 292 2.5E-107 T 14-10-2018 IPR010119 Gluconeogenesis factor VAB027_1705 ee5333ec71e30a96ea3d7d6f6db056db 296 SUPERFAMILY SSF142338 6 291 1.96E-85 T 14-10-2018 VAB027_1705 ee5333ec71e30a96ea3d7d6f6db056db 296 Gene3D G3DSA:3.40.50.12300 4 296 5.0E-79 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily VAB027_2847 c869b362f53a8b66bec811633edca3cb 141 SUPERFAMILY SSF140566 1 113 3.27E-22 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VAB027_2847 c869b362f53a8b66bec811633edca3cb 141 Gene3D G3DSA:1.20.58.300 1 113 5.7E-8 T 14-10-2018 VAB027_2847 c869b362f53a8b66bec811633edca3cb 141 Pfam PF05130 FlgN protein 2 131 1.9E-26 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 SUPERFAMILY SSF53850 22 336 3.05E-56 T 14-10-2018 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 Gene3D G3DSA:3.40.190.10 25 308 2.3E-63 T 14-10-2018 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 Gene3D G3DSA:3.40.190.10 120 315 2.3E-63 T 14-10-2018 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 Pfam PF13416 Bacterial extracellular solute-binding protein 36 294 5.8E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 1.5E-15 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 111 127 1.5E-15 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 241 260 1.5E-15 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 286 312 1.5E-15 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 175 1.5E-15 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_3130 a494cc98675d61b3b1c9ec40cdc2c0bb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 1.5E-15 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 Gene3D G3DSA:3.90.1150.10 10 468 5.6E-198 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 97.284 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 1.4E-304 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 SUPERFAMILY SSF53383 6 469 4.03E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 PIRSF PIRSF001386 3 472 2.3E-205 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 Gene3D G3DSA:3.40.640.10 61 334 5.6E-198 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_874 4d84cb2bdab3fc80239a40112be7247d 472 Pfam PF01212 Beta-eliminating lyase 49 437 1.1E-88 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 Gene3D G3DSA:3.40.50.970 55 471 2.6E-133 T 14-10-2018 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 Gene3D G3DSA:3.40.50.970 473 705 1.3E-108 T 14-10-2018 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 PIRSF PIRSF000156 1 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 SUPERFAMILY SSF52518 475 700 2.83E-96 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 Gene3D G3DSA:3.40.50.920 706 886 2.1E-71 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 SUPERFAMILY SSF52922 701 885 1.0E-58 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 SUPERFAMILY SSF52518 56 469 3.54E-140 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 294 4.3E-9 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_3039 efd4adc2b2a88d69a61360c86e048c02 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.4E-4 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 SMART SM01005 278 406 3.5E-47 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 Hamap MF_01201 Alanine racemase. 40 406 25.621 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 TIGRFAM TIGR00492 alr: alanine racemase 43 406 1.4E-67 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 Pfam PF01168 Alanine racemase, N-terminal domain 47 270 1.3E-49 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 SUPERFAMILY SSF50621 271 406 2.27E-39 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 Gene3D G3DSA:3.20.20.10 49 266 1.6E-130 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 Pfam PF00842 Alanine racemase, C-terminal domain 279 405 9.0E-32 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 SUPERFAMILY SSF51419 47 281 4.19E-47 T 14-10-2018 IPR029066 PLP-binding barrel VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 Gene3D G3DSA:2.40.37.10 43 402 1.6E-130 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 66 82 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 164 176 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 243 270 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 332 349 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 311 326 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 102 120 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_1988 2bd2c5a9119727e46e8661ee929b241f 407 PRINTS PR00992 Alanine racemase signature 200 211 5.2E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAB027_2837 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.2E-116 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VAB027_2837 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.0E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAB027_2837 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 6.8E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAB027_2837 b52daad429c6428bf861308eec9400b0 262 SUPERFAMILY SSF117143 92 223 3.53E-36 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VAB027_2837 b52daad429c6428bf861308eec9400b0 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 8.6E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAB027_2837 b52daad429c6428bf861308eec9400b0 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VAB027_2837 b52daad429c6428bf861308eec9400b0 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 8.6E-74 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.8E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.8E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.8E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.8E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.8E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 SUPERFAMILY SSF53098 3 156 2.17E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 48.104 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Gene3D G3DSA:3.30.420.10 2 159 4.7E-51 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.8E-61 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAB027_2490 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VAB027_896 6a486e962725cc1e0681ee6cea8e6b93 226 Gene3D G3DSA:2.60.120.10 14 153 1.2E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_896 6a486e962725cc1e0681ee6cea8e6b93 226 SMART SM00100 14 134 1.7E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_896 6a486e962725cc1e0681ee6cea8e6b93 226 SUPERFAMILY SSF51206 22 142 1.57E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_896 6a486e962725cc1e0681ee6cea8e6b93 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 3.4E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 542 1.4E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 Gene3D G3DSA:3.40.50.970 363 542 2.0E-126 T 14-10-2018 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 SUPERFAMILY SSF52467 188 361 1.06E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 2 566 3.3E-270 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 Gene3D G3DSA:3.40.50.1220 199 362 2.0E-126 T 14-10-2018 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 SUPERFAMILY SSF52518 2 176 1.05E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 Gene3D G3DSA:3.40.50.970 1 177 5.0E-74 T 14-10-2018 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 166 4.8E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 SUPERFAMILY SSF52518 370 564 2.75E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_3107 9dcb30f0499e3b1c66316b57e2a33d32 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 328 1.4E-45 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAB027_2965 3fc44a78312eaafa0c9acf030139e174 313 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 5.5E-54 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VAB027_2965 3fc44a78312eaafa0c9acf030139e174 313 Gene3D G3DSA:3.30.460.20 1 124 1.1E-40 T 14-10-2018 VAB027_2965 3fc44a78312eaafa0c9acf030139e174 313 SUPERFAMILY SSF143865 5 230 2.09E-31 T 14-10-2018 VAB027_2965 3fc44a78312eaafa0c9acf030139e174 313 Gene3D G3DSA:1.20.58.340 252 309 3.1E-8 T 14-10-2018 VAB027_2965 3fc44a78312eaafa0c9acf030139e174 313 Gene3D G3DSA:1.20.58.340 125 249 5.7E-29 T 14-10-2018 VAB027_2965 3fc44a78312eaafa0c9acf030139e174 313 SUPERFAMILY SSF144083 244 306 2.62E-13 T 14-10-2018 VAB027_1794 817899e26097d163d022ddd3248600c2 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 380 47.51 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VAB027_1794 817899e26097d163d022ddd3248600c2 384 SUPERFAMILY SSF53383 5 379 1.71E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1794 817899e26097d163d022ddd3248600c2 384 Gene3D G3DSA:3.40.640.10 59 283 1.2E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1794 817899e26097d163d022ddd3248600c2 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 377 3.2E-145 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VAB027_1794 817899e26097d163d022ddd3248600c2 384 Gene3D G3DSA:3.90.1150.10 43 372 1.2E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1794 817899e26097d163d022ddd3248600c2 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VAB027_1794 817899e26097d163d022ddd3248600c2 384 Pfam PF00155 Aminotransferase class I and II 43 375 2.8E-57 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Pfam PF01228 Glycine radical 15 106 1.5E-23 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 SUPERFAMILY SSF51998 64 124 2.43E-23 T 14-10-2018 VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.679 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 6.4E-68 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Gene3D G3DSA:3.20.70.20 15 125 4.6E-25 T 14-10-2018 VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VAB027_2991 3b8510fb3067bbe1d2b75a59f03b8bc6 125 PIRSF PIRSF000378 2 125 1.2E-53 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 394 4.9E-9 T 14-10-2018 VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 514 4.9E-9 T 14-10-2018 VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 9.3E-87 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 SUPERFAMILY SSF51395 2 361 1.03E-109 T 14-10-2018 VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 Gene3D G3DSA:3.20.20.70 1 367 8.7E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 Gene3D G3DSA:3.50.50.60 467 619 4.5E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 Gene3D G3DSA:3.40.50.720 373 660 4.5E-109 T 14-10-2018 VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 SUPERFAMILY SSF51905 371 600 1.55E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2628 613c9987b505b5958a213f28c4c1e9ce 666 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 373 627 1.5E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_3610 33545fe18e2efef413505fdc2206594d 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 9.9E-46 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAB027_3610 33545fe18e2efef413505fdc2206594d 314 Gene3D G3DSA:3.90.25.10 173 295 1.5E-113 T 14-10-2018 VAB027_3610 33545fe18e2efef413505fdc2206594d 314 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 314 47.38 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VAB027_3610 33545fe18e2efef413505fdc2206594d 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 313 9.6E-126 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VAB027_3610 33545fe18e2efef413505fdc2206594d 314 Gene3D G3DSA:3.40.50.720 3 307 1.5E-113 T 14-10-2018 VAB027_3610 33545fe18e2efef413505fdc2206594d 314 SUPERFAMILY SSF51735 1 308 2.55E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 SUPERFAMILY SSF53901 271 399 3.39E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 PIRSF PIRSF000429 1 401 8.0E-124 T 14-10-2018 IPR002155 Thiolase GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 Pfam PF02803 Thiolase, C-terminal domain 271 399 2.1E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 Gene3D G3DSA:3.40.47.10 6 276 1.3E-145 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.3E-148 T 14-10-2018 IPR002155 Thiolase GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.2E-94 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 SUPERFAMILY SSF53901 4 270 1.34E-79 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_484 7ead8e96558bd9b6b28a3bd03f1fa467 401 Gene3D G3DSA:3.40.47.10 126 398 1.3E-145 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 SMART SM00863 652 695 2.4E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Gene3D G3DSA:3.30.930.10 2 251 3.5E-120 T 14-10-2018 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Gene3D G3DSA:2.40.30.130 468 551 6.7E-12 T 14-10-2018 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Gene3D G3DSA:3.30.980.10 562 696 4.7E-52 T 14-10-2018 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.001 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 SUPERFAMILY SSF55681 3 254 6.46E-109 T 14-10-2018 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 7.4E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Gene3D G3DSA:3.30.54.20 623 676 4.7E-52 T 14-10-2018 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 SUPERFAMILY SSF101353 255 460 3.92E-59 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 SUPERFAMILY SSF50447 454 551 7.06E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 SUPERFAMILY SSF55186 551 711 3.53E-53 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Pfam PF02272 DHHA1 domain 719 856 1.5E-29 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 2.0E-223 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VAB027_3304 11b6c5654767fe0bc2147173409dd822 860 Gene3D G3DSA:3.10.310.40 749 857 2.1E-31 T 14-10-2018 VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 Gene3D G3DSA:3.40.50.620 194 514 6.0E-111 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 Pfam PF00733 Asparagine synthase 211 366 4.3E-56 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 PIRSF PIRSF001589 1 377 4.6E-108 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 PIRSF PIRSF001589 362 511 4.9E-27 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.6E-116 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 SUPERFAMILY SSF56235 1 196 1.97E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.0E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 Gene3D G3DSA:3.60.20.10 2 193 5.6E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1677 e2d645e51c102626caf22a5e6e974537 554 SUPERFAMILY SSF52402 210 479 5.03E-73 T 14-10-2018 VAB027_982 97009769c33672a602f67e157b7b179a 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.656 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VAB027_982 97009769c33672a602f67e157b7b179a 405 Gene3D G3DSA:1.10.3860.10 3 405 8.0E-72 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_982 97009769c33672a602f67e157b7b179a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.8E-10 T 14-10-2018 VAB027_982 97009769c33672a602f67e157b7b179a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.8E-10 T 14-10-2018 VAB027_982 97009769c33672a602f67e157b7b179a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.8E-10 T 14-10-2018 VAB027_982 97009769c33672a602f67e157b7b179a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.8E-10 T 14-10-2018 VAB027_982 97009769c33672a602f67e157b7b179a 405 SUPERFAMILY SSF118215 15 398 4.18E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_982 97009769c33672a602f67e157b7b179a 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 6.9E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 SUPERFAMILY SSF47928 3 105 3.79E-26 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 6.5E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 6.5E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 6.5E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 6.5E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 6.5E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.3E-50 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.5E-59 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 Gene3D G3DSA:1.10.520.20 2 106 6.3E-37 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3721 a54f423b65c68665d7cd0a6a7104a3d7 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.01 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_1069 bb6fc8afa5e498f2e9bbe635e6a717ac 439 PIRSF PIRSF006060 1 437 5.1E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_1069 bb6fc8afa5e498f2e9bbe635e6a717ac 439 Pfam PF13520 Amino acid permease 8 403 3.3E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_1069 bb6fc8afa5e498f2e9bbe635e6a717ac 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 35.414 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VAB027_1069 bb6fc8afa5e498f2e9bbe635e6a717ac 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 427 7.4E-227 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VAB027_1069 bb6fc8afa5e498f2e9bbe635e6a717ac 439 Gene3D G3DSA:1.20.1740.10 1 438 3.9E-61 T 14-10-2018 VAB027_1069 bb6fc8afa5e498f2e9bbe635e6a717ac 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 436 9.6E-134 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VAB027_2675 f0fe04a189f85c618b92211857a72258 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 5.6E-99 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VAB027_2675 f0fe04a189f85c618b92211857a72258 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.356 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.523 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 Gene3D G3DSA:3.40.50.10860 8 276 4.8E-107 T 14-10-2018 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 SUPERFAMILY SSF53223 1 122 6.04E-39 T 14-10-2018 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 4.3E-38 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 Gene3D G3DSA:3.40.50.720 6 259 4.8E-107 T 14-10-2018 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.4E-87 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 SUPERFAMILY SSF51735 123 280 1.27E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2585 8c29e9c94da44e18bee88e3681b3957e 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 9.6E-68 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAB027_2588 b814c555e9aab4e280404ad577ed928d 296 Gene3D G3DSA:1.10.10.10 3 91 3.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2588 b814c555e9aab4e280404ad577ed928d 296 Pfam PF03466 LysR substrate binding domain 89 291 1.9E-36 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2588 b814c555e9aab4e280404ad577ed928d 296 SUPERFAMILY SSF46785 3 113 1.82E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2588 b814c555e9aab4e280404ad577ed928d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2588 b814c555e9aab4e280404ad577ed928d 296 Gene3D G3DSA:3.40.190.290 92 293 2.1E-50 T 14-10-2018 VAB027_2588 b814c555e9aab4e280404ad577ed928d 296 SUPERFAMILY SSF53850 90 294 1.21E-40 T 14-10-2018 VAB027_2801 7fdd97b5ccefc7fa657d726bb5a9677d 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 3.1E-116 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_2801 7fdd97b5ccefc7fa657d726bb5a9677d 283 Pfam PF00793 DAHP synthetase I family 10 275 1.0E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_2801 7fdd97b5ccefc7fa657d726bb5a9677d 283 Gene3D G3DSA:3.20.20.70 1 283 2.6E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2801 7fdd97b5ccefc7fa657d726bb5a9677d 283 SUPERFAMILY SSF51569 3 279 6.5E-105 T 14-10-2018 VAB027_2801 7fdd97b5ccefc7fa657d726bb5a9677d 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.256 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_3507 871b160b764120fc5d64944d5ef631a5 382 Pfam PF01551 Peptidase family M23 283 376 8.4E-23 T 14-10-2018 IPR016047 Peptidase M23 VAB027_3507 871b160b764120fc5d64944d5ef631a5 382 SUPERFAMILY SSF51261 164 380 1.88E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_3507 871b160b764120fc5d64944d5ef631a5 382 Gene3D G3DSA:2.70.70.10 242 382 4.6E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_3684 36ae3187adfb1ae60b40f1bf915cee74 312 SUPERFAMILY SSF161098 93 295 6.28E-25 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3684 36ae3187adfb1ae60b40f1bf915cee74 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 4.7E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAB027_3684 36ae3187adfb1ae60b40f1bf915cee74 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 7.8E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3684 36ae3187adfb1ae60b40f1bf915cee74 312 Gene3D G3DSA:1.10.3720.10 86 306 1.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_605 f6d069fa633e65d59715a40450f7e537 522 Gene3D G3DSA:1.10.246.130 229 333 3.2E-10 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 Gene3D G3DSA:3.60.20.40 334 518 2.4E-56 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 SUPERFAMILY SSF56235 4 517 1.16E-127 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_605 f6d069fa633e65d59715a40450f7e537 522 Pfam PF01019 Gamma-glutamyltranspeptidase 19 514 6.1E-130 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 26 51 2.1E-14 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 95 113 2.1E-14 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 133 2.1E-14 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 2.1E-14 T 14-10-2018 VAB027_605 f6d069fa633e65d59715a40450f7e537 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 333 351 2.1E-14 T 14-10-2018 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 SUPERFAMILY SSF55545 208 331 3.14E-25 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 4.6E-16 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Gene3D G3DSA:2.60.40.10 818 882 2.0E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 3.4E-27 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Gene3D G3DSA:3.20.20.80 330 817 9.6E-165 T 14-10-2018 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 SMART SM01081 34 195 1.5E-89 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Gene3D G3DSA:2.60.40.290 25 167 2.5E-54 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Gene3D G3DSA:3.30.379.10 204 329 3.0E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 SUPERFAMILY SSF51445 332 773 1.14E-142 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 2.0E-109 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 SUPERFAMILY SSF81296 780 881 5.18E-37 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 4.5E-61 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 SUPERFAMILY SSF49384 26 198 8.79E-65 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_2859 12fe2117f78c8f01efb1f6d3eaa53e1e 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 5.4E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3229 7239af25dfbff2920f9fbed45dbf7c86 328 Gene3D G3DSA:1.10.3720.10 88 327 7.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3229 7239af25dfbff2920f9fbed45dbf7c86 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 2.5E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3229 7239af25dfbff2920f9fbed45dbf7c86 328 SUPERFAMILY SSF161098 93 324 3.27E-13 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 508 1.3E-130 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 SUPERFAMILY SSF69279 196 370 1.7E-45 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 Gene3D G3DSA:2.40.50.230 362 461 8.5E-42 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 526 5.0E-188 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 Gene3D G3DSA:2.30.110.50 13 336 1.2E-83 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 Gene3D G3DSA:3.30.1920.30 228 291 1.2E-83 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 SUPERFAMILY SSF69279 7 190 7.37E-51 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 SUPERFAMILY SSF69349 447 628 2.98E-51 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 Gene3D G3DSA:3.55.50.10 104 195 1.2E-83 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 2.8E-76 T 14-10-2018 VAB027_1004 d5056b5baa8151d43c2435e923ce1c00 698 SUPERFAMILY SSF69255 369 456 5.23E-33 T 14-10-2018 VAB027_1828 27dacc19a03520eb3352b857d5b02b54 415 SUPERFAMILY SSF56796 1 380 1.19E-89 T 14-10-2018 VAB027_1828 27dacc19a03520eb3352b857d5b02b54 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.1E-89 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAB027_1828 27dacc19a03520eb3352b857d5b02b54 415 Gene3D G3DSA:1.20.1090.10 185 382 3.7E-40 T 14-10-2018 VAB027_1828 27dacc19a03520eb3352b857d5b02b54 415 Gene3D G3DSA:3.40.50.1970 1 180 1.9E-48 T 14-10-2018 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 SUPERFAMILY SSF53335 76 438 2.91E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 101 438 1.1E-32 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 69.047 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.2E-130 T 14-10-2018 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 Gene3D G3DSA:2.40.50.140 1 88 7.1E-28 T 14-10-2018 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 Gene3D G3DSA:3.40.50.150 89 433 1.2E-118 T 14-10-2018 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 Gene3D G3DSA:3.40.1350.30 135 271 1.2E-118 T 14-10-2018 VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 SUPERFAMILY SSF50249 17 74 6.28E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 Pfam PF01938 TRAM domain 17 68 2.1E-9 T 14-10-2018 IPR002792 TRAM domain VAB027_3078 c0d7d9efebb024f58bb73b82b8685b6a 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VAB027_2882 aa78c8b25c03ce3f722426e85abfa91f 174 SUPERFAMILY SSF50814 2 165 2.53E-68 T 14-10-2018 IPR012674 Calycin VAB027_2882 aa78c8b25c03ce3f722426e85abfa91f 174 Pfam PF05870 Phenolic acid decarboxylase (PAD) 8 164 1.6E-80 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 VAB027_2882 aa78c8b25c03ce3f722426e85abfa91f 174 PIRSF PIRSF011561 1 174 2.5E-92 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 VAB027_2882 aa78c8b25c03ce3f722426e85abfa91f 174 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 8 157 8.0E-86 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 VAB027_2882 aa78c8b25c03ce3f722426e85abfa91f 174 Gene3D G3DSA:2.40.128.20 1 167 1.1E-73 T 14-10-2018 IPR012674 Calycin VAB027_280 5e4d319f5e05a7003ab91cca4d967734 172 Gene3D G3DSA:1.20.141.10 1 172 1.4E-47 T 14-10-2018 VAB027_280 5e4d319f5e05a7003ab91cca4d967734 172 Pfam PF05838 Glycosyl hydrolase 108 7 94 3.5E-20 T 14-10-2018 IPR008565 Protein of unknown function DUF847 VAB027_280 5e4d319f5e05a7003ab91cca4d967734 172 Pfam PF09374 Predicted Peptidoglycan domain 97 159 6.1E-12 T 14-10-2018 IPR018537 Peptidoglycan binding domain VAB027_280 5e4d319f5e05a7003ab91cca4d967734 172 SUPERFAMILY SSF53955 2 163 5.62E-45 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_983 2d15018d4763f1f6bc51317b0bb009b1 594 SUPERFAMILY SSF52025 134 257 1.31E-18 T 14-10-2018 VAB027_983 2d15018d4763f1f6bc51317b0bb009b1 594 Pfam PF02225 PA domain 144 245 1.7E-17 T 14-10-2018 IPR003137 PA domain VAB027_983 2d15018d4763f1f6bc51317b0bb009b1 594 SUPERFAMILY SSF53187 37 541 1.98E-58 T 14-10-2018 VAB027_983 2d15018d4763f1f6bc51317b0bb009b1 594 Pfam PF04389 Peptidase family M28 272 531 1.4E-35 T 14-10-2018 IPR007484 Peptidase M28 VAB027_2718 e60999b8e9a4dc9b590720f952d92be8 262 Pfam PF00005 ABC transporter 20 148 1.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2718 e60999b8e9a4dc9b590720f952d92be8 262 SUPERFAMILY SSF52540 3 227 4.13E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2718 e60999b8e9a4dc9b590720f952d92be8 262 Gene3D G3DSA:3.40.50.300 1 240 8.2E-56 T 14-10-2018 VAB027_2718 e60999b8e9a4dc9b590720f952d92be8 262 SMART SM00382 29 198 7.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 SMART SM00729 165 390 4.0E-57 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 Gene3D G3DSA:3.40.50.12160 33 161 2.8E-31 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 Pfam PF00919 Uncharacterized protein family UPF0004 34 121 4.9E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 34 463 6.5E-188 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 Gene3D G3DSA:2.40.50.140 405 470 2.4E-24 T 14-10-2018 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 SUPERFAMILY SSF102114 131 395 6.41E-53 T 14-10-2018 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 169 189 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 463 1.1E-110 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 Pfam PF04055 Radical SAM superfamily 171 348 6.2E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 33 465 63.193 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 VAB027_270 864c425638bf1a58f6b0c495dbc1a10a 470 Gene3D G3DSA:3.80.30.20 163 404 7.3E-73 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_3191 a9bc17a73c30f50abc9431537b6fd2e0 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.6E-10 T 14-10-2018 VAB027_3191 a9bc17a73c30f50abc9431537b6fd2e0 167 SUPERFAMILY SSF55729 1 130 1.34E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3191 a9bc17a73c30f50abc9431537b6fd2e0 167 Gene3D G3DSA:3.40.630.30 1 167 1.1E-48 T 14-10-2018 VAB027_41 9b71a65de1f6d0d6dfbdeaebb91b85c0 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 185 1.6E-39 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VAB027_41 9b71a65de1f6d0d6dfbdeaebb91b85c0 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 39.841 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VAB027_41 9b71a65de1f6d0d6dfbdeaebb91b85c0 185 Pfam PF01300 Telomere recombination 10 185 7.7E-47 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VAB027_41 9b71a65de1f6d0d6dfbdeaebb91b85c0 185 SUPERFAMILY SSF55821 2 178 2.84E-54 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAB027_41 9b71a65de1f6d0d6dfbdeaebb91b85c0 185 Gene3D G3DSA:3.90.870.10 1 183 1.5E-60 T 14-10-2018 VAB027_2048 3252bfc544a1a662bef255399924afb8 358 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 353 2.6E-41 T 14-10-2018 IPR000160 GGDEF domain VAB027_2048 3252bfc544a1a662bef255399924afb8 358 SUPERFAMILY SSF55073 202 352 5.49E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2048 3252bfc544a1a662bef255399924afb8 358 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 349 1.2E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_2048 3252bfc544a1a662bef255399924afb8 358 SMART SM00267 183 353 1.6E-42 T 14-10-2018 IPR000160 GGDEF domain VAB027_2048 3252bfc544a1a662bef255399924afb8 358 Gene3D G3DSA:3.30.70.270 195 357 1.8E-48 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 SUPERFAMILY SSF111369 114 270 6.8E-5 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 Pfam PF13437 HlyD family secretion protein 206 282 3.1E-5 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 Gene3D G3DSA:2.40.30.170 33 321 7.1E-32 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 Gene3D G3DSA:2.40.50.100 42 240 7.1E-32 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 SUPERFAMILY SSF111369 40 102 6.41E-6 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 Gene3D G3DSA:1.10.287.470 76 205 7.1E-32 T 14-10-2018 VAB027_2255 2834359c42ce2b2d4ed0d9b40f7b77ef 324 Pfam PF13533 Biotin-lipoyl like 45 88 3.7E-11 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAB027_2870 cd045872431b01eeaadacc5c38bfb746 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_2870 cd045872431b01eeaadacc5c38bfb746 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 1.0E-77 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VAB027_2870 cd045872431b01eeaadacc5c38bfb746 212 Pfam PF00551 Formyl transferase 3 182 2.8E-64 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_2870 cd045872431b01eeaadacc5c38bfb746 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.319 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VAB027_2870 cd045872431b01eeaadacc5c38bfb746 212 SUPERFAMILY SSF53328 4 198 4.97E-65 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_2870 cd045872431b01eeaadacc5c38bfb746 212 Gene3D G3DSA:3.40.50.170 3 212 3.6E-85 T 14-10-2018 VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 Gene3D G3DSA:3.40.640.10 3 255 1.1E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 SUPERFAMILY SSF53383 21 339 2.96E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 340 2.4E-102 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 PIRSF PIRSF001434 1 341 2.9E-108 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 338 8.2E-152 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_2318 158d98cfa391d75a4a8d0184c6cb515f 341 Gene3D G3DSA:3.90.1150.10 256 341 4.0E-22 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_126 1d108e46cb2382293727ec4648742fee 224 SMART SM00382 27 215 1.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_126 1d108e46cb2382293727ec4648742fee 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_126 1d108e46cb2382293727ec4648742fee 224 Pfam PF00005 ABC transporter 18 165 6.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_126 1d108e46cb2382293727ec4648742fee 224 SUPERFAMILY SSF52540 1 220 4.26E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_126 1d108e46cb2382293727ec4648742fee 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.1E-90 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VAB027_126 1d108e46cb2382293727ec4648742fee 224 Gene3D G3DSA:3.40.50.300 1 223 3.5E-62 T 14-10-2018 VAB027_646 f388153b1757c2f0b1b3c984368b424f 155 SUPERFAMILY SSF102114 23 114 3.34E-7 T 14-10-2018 VAB027_646 f388153b1757c2f0b1b3c984368b424f 155 Gene3D G3DSA:3.20.20.70 2 154 2.0E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_646 f388153b1757c2f0b1b3c984368b424f 155 PIRSF PIRSF000368 1 155 7.8E-60 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VAB027_646 f388153b1757c2f0b1b3c984368b424f 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VAB027_646 f388153b1757c2f0b1b3c984368b424f 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.1E-52 T 14-10-2018 VAB027_646 f388153b1757c2f0b1b3c984368b424f 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 3.9E-61 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 Gene3D G3DSA:3.30.1490.20 115 181 4.4E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 Gene3D G3DSA:3.40.50.20 1 114 6.4E-40 T 14-10-2018 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 SUPERFAMILY SSF56059 98 288 2.6E-49 T 14-10-2018 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 Gene3D G3DSA:3.30.470.80 182 299 5.0E-43 T 14-10-2018 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.9E-87 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.6E-68 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VAB027_2921 e514a44276bf7d897c570ecdd2be59f5 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.959 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00267 466 636 5.5E-12 T 14-10-2018 IPR000160 GGDEF domain VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Gene3D G3DSA:1.25.40.10 283 454 1.3E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 632 3.0E-18 T 14-10-2018 IPR000160 GGDEF domain VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SUPERFAMILY SSF48452 175 324 2.18E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 630 1.4E-16 T 14-10-2018 IPR000160 GGDEF domain VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SUPERFAMILY SSF48452 102 206 9.48E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Gene3D G3DSA:3.30.70.270 474 636 3.8E-22 T 14-10-2018 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Pfam PF13424 Tetratricopeptide repeat 211 277 3.3E-10 T 14-10-2018 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SUPERFAMILY SSF55073 483 632 2.12E-20 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Gene3D G3DSA:1.25.40.10 94 282 2.7E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Pfam PF13181 Tetratricopeptide repeat 331 360 0.034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 Pfam PF13181 Tetratricopeptide repeat 369 394 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SUPERFAMILY SSF48452 288 419 2.92E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00028 329 362 0.048 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00028 209 242 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00028 172 205 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00028 249 282 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00028 369 402 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2042 947293a839d5632d825ef1f44e02c404 648 SMART SM00028 289 322 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 2.3E-129 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 6.4E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_875 1455c2f5c17c79ec5d3f73368536c318 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 384 2.1E-132 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.64 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.2E-90 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 SUPERFAMILY SSF52540 6 204 1.02E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 7.0E-42 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 178 191 4.4E-37 T 14-10-2018 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 41 52 4.4E-37 T 14-10-2018 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 156 167 4.4E-37 T 14-10-2018 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 142 152 4.4E-37 T 14-10-2018 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 7 24 4.4E-37 T 14-10-2018 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 PRINTS PR00988 Uridine kinase signature 86 101 4.4E-37 T 14-10-2018 VAB027_1719 4051de9a9544d08f881a0171bb45eca4 213 Gene3D G3DSA:3.40.50.300 3 213 2.1E-61 T 14-10-2018 VAB027_1862 315df5c5e0ac0301e2132bda734d0940 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 5.7E-53 T 14-10-2018 IPR018724 2OG-Fe dioxygenase VAB027_1862 315df5c5e0ac0301e2132bda734d0940 218 Gene3D G3DSA:2.60.120.620 1 215 6.0E-51 T 14-10-2018 VAB027_89 84dcb45dfe6a6c92735e8eccac43e486 277 Pfam PF01694 Rhomboid family 134 273 4.4E-34 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VAB027_89 84dcb45dfe6a6c92735e8eccac43e486 277 SUPERFAMILY SSF144091 97 273 1.44E-41 T 14-10-2018 VAB027_89 84dcb45dfe6a6c92735e8eccac43e486 277 Gene3D G3DSA:3.30.70.2350 1 69 8.4E-26 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VAB027_89 84dcb45dfe6a6c92735e8eccac43e486 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 1.1E-113 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VAB027_89 84dcb45dfe6a6c92735e8eccac43e486 277 Gene3D G3DSA:1.20.1540.10 91 277 4.2E-53 T 14-10-2018 IPR035952 Rhomboid-like superfamily VAB027_89 84dcb45dfe6a6c92735e8eccac43e486 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 86 1.3E-31 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 Gene3D G3DSA:1.10.10.10 214 284 6.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 Gene3D G3DSA:1.20.120.1810 8 122 3.4E-27 T 14-10-2018 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 SUPERFAMILY SSF88659 198 283 2.24E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 7.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 7.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 233 245 7.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 7.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF04545 Sigma-70, region 4 229 281 7.1E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 2.6E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.881 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 1.8E-126 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.4E-8 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_128 5f6c6ad2c242f9c2649c91f3b925fb80 286 SUPERFAMILY SSF88946 11 122 6.02E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:1.20.1330.10 44 327 1.1E-74 T 14-10-2018 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF07196 Flagellin hook IN motif 201 245 3.3E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.3E-40 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 76 95 6.4E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 37 54 6.4E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 111 134 6.4E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 SUPERFAMILY SSF64518 1 377 9.42E-93 T 14-10-2018 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:3.30.70.2120 172 275 1.1E-74 T 14-10-2018 VAB027_2776 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:1.10.8.410 328 377 1.9E-19 T 14-10-2018 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.30.30.30 1 65 5.0E-13 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 4.5E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 2.5E-103 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.9E-15 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50249 132 188 4.63E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.40.50.140 67 130 1.3E-15 T 14-10-2018 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.7E-19 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50104 1 65 2.35E-10 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50249 67 129 3.13E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 SMART SM00841 132 187 4.0E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.40.50.140 131 188 9.9E-20 T 14-10-2018 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 PIRSF PIRSF005901 1 188 1.9E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 SMART SM01185 69 124 1.1E-15 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAB027_1888 bd83ffb5ea769c6ebad18209b1f97646 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.862 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VAB027_3591 88e3dc151919aab9d1d658b80a436c46 368 Gene3D G3DSA:2.60.120.10 251 365 1.3E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_3591 88e3dc151919aab9d1d658b80a436c46 368 SUPERFAMILY SSF51735 1 232 3.29E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3591 88e3dc151919aab9d1d658b80a436c46 368 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 185 7.6E-16 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAB027_3591 88e3dc151919aab9d1d658b80a436c46 368 Pfam PF05523 WxcM-like, C-terminal 268 358 1.1E-4 T 14-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 VAB027_3591 88e3dc151919aab9d1d658b80a436c46 368 SUPERFAMILY SSF51182 237 364 7.72E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_3591 88e3dc151919aab9d1d658b80a436c46 368 Gene3D G3DSA:3.40.50.720 1 248 9.0E-87 T 14-10-2018 VAB027_1233 e7da83204145fe47cc5013108ba01b99 379 SUPERFAMILY SSF52540 7 229 6.91E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1233 e7da83204145fe47cc5013108ba01b99 379 Pfam PF07728 AAA domain (dynein-related subfamily) 79 219 1.5E-6 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.1E-98 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 2.9E-51 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 Pfam PF05683 Fumarase C-terminus 289 490 1.7E-83 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 SUPERFAMILY SSF117457 318 489 3.92E-64 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.1E-63 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 PIRSF PIRSF001394 1 505 8.2E-216 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VAB027_1980 b5354bc69b59603651801cb38ca8fa6f 505 Gene3D G3DSA:3.20.130.10 310 490 1.4E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VAB027_438 0fcd18976980a86ebc6056dcc5de68c6 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 6.1E-64 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VAB027_438 0fcd18976980a86ebc6056dcc5de68c6 216 Gene3D G3DSA:1.10.10.10 1 89 2.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_438 0fcd18976980a86ebc6056dcc5de68c6 216 SUPERFAMILY SSF46785 90 173 6.39E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_438 0fcd18976980a86ebc6056dcc5de68c6 216 SUPERFAMILY SSF46785 2 84 5.98E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_438 0fcd18976980a86ebc6056dcc5de68c6 216 Gene3D G3DSA:1.10.10.10 95 175 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_438 0fcd18976980a86ebc6056dcc5de68c6 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 34.847 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 SUPERFAMILY SSF109755 10 225 1.15E-70 T 14-10-2018 VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 Pfam PF01895 PhoU domain 23 109 1.1E-22 T 14-10-2018 IPR026022 PhoU domain VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 Pfam PF01895 PhoU domain 128 210 1.9E-16 T 14-10-2018 IPR026022 PhoU domain VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 Gene3D G3DSA:1.20.58.220 115 232 4.2E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 Gene3D G3DSA:1.20.58.220 1 114 1.6E-40 T 14-10-2018 IPR038078 PhoU-like domain superfamily VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 PIRSF PIRSF003107 4 223 4.6E-70 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VAB027_1388 c4c0c05ffbe862e87ea67bda72ef2485 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.3E-78 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.8E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 SMART SM00411 1 90 2.4E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 SUPERFAMILY SSF47729 1 90 1.37E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_3572 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.0E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAB027_2604 44464637f9d17d7620da6d8dd41e5241 196 SUPERFAMILY SSF48498 84 195 4.6E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_2604 44464637f9d17d7620da6d8dd41e5241 196 Gene3D G3DSA:1.10.357.10 1 192 7.0E-40 T 14-10-2018 VAB027_2604 44464637f9d17d7620da6d8dd41e5241 196 Pfam PF13305 WHG domain 92 172 5.1E-11 T 14-10-2018 IPR025996 WHG domain VAB027_2604 44464637f9d17d7620da6d8dd41e5241 196 SUPERFAMILY SSF46689 8 78 1.94E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3035 f8b6a87fc61165d5579bf12d0f9d89eb 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.316 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VAB027_3035 f8b6a87fc61165d5579bf12d0f9d89eb 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 104 6.8E-30 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VAB027_3035 f8b6a87fc61165d5579bf12d0f9d89eb 106 Pfam PF04999 Cell division protein FtsL 9 104 1.9E-35 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VAB027_2001 412773d585c9cea49781480acd87f018 502 Pfam PF00005 ABC transporter 25 174 2.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2001 412773d585c9cea49781480acd87f018 502 SUPERFAMILY SSF52540 249 487 2.33E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2001 412773d585c9cea49781480acd87f018 502 SMART SM00382 284 479 2.1 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2001 412773d585c9cea49781480acd87f018 502 SMART SM00382 34 221 7.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2001 412773d585c9cea49781480acd87f018 502 Gene3D G3DSA:3.40.50.300 1 247 1.8E-53 T 14-10-2018 VAB027_2001 412773d585c9cea49781480acd87f018 502 Gene3D G3DSA:3.40.50.300 256 497 2.0E-38 T 14-10-2018 VAB027_2001 412773d585c9cea49781480acd87f018 502 Pfam PF00005 ABC transporter 276 430 5.5E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2001 412773d585c9cea49781480acd87f018 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2001 412773d585c9cea49781480acd87f018 502 SUPERFAMILY SSF52540 8 229 6.25E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_795 37f5ec442d417eeaf8275250d9200250 216 Pfam PF00072 Response regulator receiver domain 4 111 7.6E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_795 37f5ec442d417eeaf8275250d9200250 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 7.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_795 37f5ec442d417eeaf8275250d9200250 216 SUPERFAMILY SSF52172 1 168 9.25E-25 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_795 37f5ec442d417eeaf8275250d9200250 216 Gene3D G3DSA:3.40.50.2300 1 119 3.8E-27 T 14-10-2018 VAB027_795 37f5ec442d417eeaf8275250d9200250 216 SMART SM00862 140 211 3.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_795 37f5ec442d417eeaf8275250d9200250 216 SUPERFAMILY SSF46894 117 211 3.4E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_795 37f5ec442d417eeaf8275250d9200250 216 Gene3D G3DSA:1.10.10.10 120 215 3.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_795 37f5ec442d417eeaf8275250d9200250 216 SMART SM00448 2 110 2.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_813 89d6082c720698374fbeeab77df83682 106 PIRSF PIRSF028291 1 105 4.8E-47 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 VAB027_813 89d6082c720698374fbeeab77df83682 106 Gene3D G3DSA:3.30.310.50 8 103 9.0E-22 T 14-10-2018 VAB027_813 89d6082c720698374fbeeab77df83682 106 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 12 101 1.1E-23 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 SUPERFAMILY SSF58104 104 304 2.62E-53 T 14-10-2018 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 SMART SM00283 119 306 3.5E-16 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 228 257 2.5E-10 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 305 2.5E-10 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 128 157 2.5E-10 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 165 305 6.9E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 SUPERFAMILY SSF55785 25 127 2.79E-22 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 Gene3D G3DSA:3.30.450.20 3 100 4.2E-5 T 14-10-2018 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 136 8.6E-16 T 14-10-2018 IPR000014 PAS domain VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 Pfam PF08447 PAS fold 39 123 1.2E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 SMART SM00086 88 130 0.0011 T 14-10-2018 IPR001610 PAC motif VAB027_325 57825d1adbc6e5fc2a882af62dd249ab 306 Gene3D G3DSA:1.10.287.950 101 306 6.4E-48 T 14-10-2018 VAB027_108 cca51670e294f430773ada11b2860f28 276 Gene3D G3DSA:3.10.310.10 5 272 3.2E-107 T 14-10-2018 VAB027_108 cca51670e294f430773ada11b2860f28 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.1E-102 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAB027_108 cca51670e294f430773ada11b2860f28 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.54 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAB027_108 cca51670e294f430773ada11b2860f28 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.4E-33 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAB027_108 cca51670e294f430773ada11b2860f28 276 Pfam PF01678 Diaminopimelate epimerase 154 268 1.1E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAB027_108 cca51670e294f430773ada11b2860f28 276 Gene3D G3DSA:3.10.310.10 117 263 3.2E-107 T 14-10-2018 VAB027_108 cca51670e294f430773ada11b2860f28 276 SUPERFAMILY SSF54506 2 274 3.14E-54 T 14-10-2018 VAB027_108 cca51670e294f430773ada11b2860f28 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAB027_1146 8980956d9dd3aaefd45df8e1b0cfad46 299 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1146 8980956d9dd3aaefd45df8e1b0cfad46 299 Gene3D G3DSA:3.40.190.290 90 292 2.8E-63 T 14-10-2018 VAB027_1146 8980956d9dd3aaefd45df8e1b0cfad46 299 Gene3D G3DSA:1.10.10.10 1 84 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1146 8980956d9dd3aaefd45df8e1b0cfad46 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1146 8980956d9dd3aaefd45df8e1b0cfad46 299 SUPERFAMILY SSF46785 1 87 6.15E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1146 8980956d9dd3aaefd45df8e1b0cfad46 299 SUPERFAMILY SSF53850 88 292 1.86E-44 T 14-10-2018 VAB027_1208 464b8891f49853565637768380bbd85d 453 SMART SM00729 61 284 5.7E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_1208 464b8891f49853565637768380bbd85d 453 SUPERFAMILY SSF102114 62 438 1.31E-82 T 14-10-2018 VAB027_1208 464b8891f49853565637768380bbd85d 453 Pfam PF04055 Radical SAM superfamily 66 236 7.5E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_1208 464b8891f49853565637768380bbd85d 453 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 22 441 2.5E-183 T 14-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW VAB027_1208 464b8891f49853565637768380bbd85d 453 Gene3D G3DSA:3.80.30.20 29 363 4.0E-74 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_2924 b1887fdb328705e962b826eee42957df 505 SUPERFAMILY SSF55073 344 501 1.57E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2924 b1887fdb328705e962b826eee42957df 505 SMART SM00267 328 502 1.1E-50 T 14-10-2018 IPR000160 GGDEF domain VAB027_2924 b1887fdb328705e962b826eee42957df 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 502 7.7E-41 T 14-10-2018 IPR000160 GGDEF domain VAB027_2924 b1887fdb328705e962b826eee42957df 505 Pfam PF05228 CHASE4 domain 58 212 4.0E-25 T 14-10-2018 IPR007892 CHASE4 VAB027_2924 b1887fdb328705e962b826eee42957df 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 498 4.5E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_2924 b1887fdb328705e962b826eee42957df 505 Gene3D G3DSA:3.30.70.270 325 503 1.5E-46 T 14-10-2018 VAB027_2158 c7afbca4309ec16e5cdba8f6e855325a 205 Pfam PF13247 4Fe-4S dicluster domain 54 125 2.9E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_2158 c7afbca4309ec16e5cdba8f6e855325a 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_2158 c7afbca4309ec16e5cdba8f6e855325a 205 Gene3D G3DSA:3.30.70.20 5 185 1.8E-34 T 14-10-2018 VAB027_2158 c7afbca4309ec16e5cdba8f6e855325a 205 SUPERFAMILY SSF54862 1 183 6.07E-48 T 14-10-2018 VAB027_2158 c7afbca4309ec16e5cdba8f6e855325a 205 Gene3D G3DSA:3.30.70.20 63 120 1.8E-34 T 14-10-2018 VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 SUPERFAMILY SSF53335 157 336 2.74E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 5.3E-56 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 Pfam PF05175 Methyltransferase small domain 171 336 3.1E-60 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 Gene3D G3DSA:3.40.50.150 1 158 9.2E-51 T 14-10-2018 VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.852 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VAB027_3226 9a2b93e67402b1775c33b16cc5aa9ad4 340 Gene3D G3DSA:3.40.50.150 159 340 1.5E-43 T 14-10-2018 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 1.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 1.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 SMART SM00304 212 266 7.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 SMART SM00283 281 542 1.6E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 Gene3D G3DSA:1.10.287.950 212 543 4.3E-77 T 14-10-2018 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 SUPERFAMILY SSF58104 240 543 3.01E-74 T 14-10-2018 VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 172 1.4E-19 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAB027_1100 babe06dfa544f184813cf73ca2e55832 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 508 1.5E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_986 ed805e1646fe84ce5b142e277c715bbc 624 Pfam PF05787 Bacterial protein of unknown function (DUF839) 56 591 7.8E-211 T 14-10-2018 IPR008557 Protein of unknown function DUF839 VAB027_986 ed805e1646fe84ce5b142e277c715bbc 624 SUPERFAMILY SSF63829 288 591 3.17E-16 T 14-10-2018 VAB027_986 ed805e1646fe84ce5b142e277c715bbc 624 Gene3D G3DSA:2.120.10.30 462 621 2.2E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 Gene3D G3DSA:3.40.1360.10 78 199 1.2E-38 T 14-10-2018 VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 Pfam PF13662 Toprim domain 82 172 3.0E-23 T 14-10-2018 IPR006171 TOPRIM domain VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 SUPERFAMILY SSF111304 2 199 3.92E-71 T 14-10-2018 IPR023627 Recombination protein RecR VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.5E-78 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.616 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 Pfam PF02132 RecR protein 41 77 2.7E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 Gene3D G3DSA:1.10.8.420 1 52 3.9E-19 T 14-10-2018 VAB027_1737 f561a3b245f7906828a88dc69c456b57 200 SMART SM00493 81 166 3.6E-18 T 14-10-2018 IPR006171 TOPRIM domain VAB027_2735 86d0cdd279a2389871f31c2a8c400d46 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VAB027_2735 86d0cdd279a2389871f31c2a8c400d46 175 PIRSF PIRSF038996 1 172 7.1E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAB027_2735 86d0cdd279a2389871f31c2a8c400d46 175 Gene3D G3DSA:3.40.50.360 3 175 1.8E-57 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2735 86d0cdd279a2389871f31c2a8c400d46 175 SUPERFAMILY SSF52218 4 171 3.57E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2735 86d0cdd279a2389871f31c2a8c400d46 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 6.6E-74 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAB027_2735 86d0cdd279a2389871f31c2a8c400d46 175 Pfam PF00258 Flavodoxin 6 160 3.1E-33 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAB027_1108 b55170139bba3df8d6c1a8a3e83823ab 663 Pfam PF08014 Domain of unknown function (DUF1704) 324 657 6.2E-110 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VAB027_1108 b55170139bba3df8d6c1a8a3e83823ab 663 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 297 656 9.3E-147 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VAB027_1108 b55170139bba3df8d6c1a8a3e83823ab 663 SUPERFAMILY SSF53187 38 225 2.83E-8 T 14-10-2018 VAB027_1108 b55170139bba3df8d6c1a8a3e83823ab 663 SMART SM01154 323 662 1.3E-157 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VAB027_1108 b55170139bba3df8d6c1a8a3e83823ab 663 Pfam PF05013 N-formylglutamate amidohydrolase 42 225 5.6E-13 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 PRINTS PR00107 Phosphocarrier protein signature 365 382 8.9E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 PRINTS PR00107 Phosphocarrier protein signature 322 338 8.9E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 PRINTS PR00107 Phosphocarrier protein signature 350 365 8.9E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 322 329 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 Pfam PF00381 PTS HPr component phosphorylation site 313 391 2.0E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 351 366 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 Gene3D G3DSA:3.40.930.10 1 142 7.3E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 SUPERFAMILY SSF55804 145 275 1.74E-17 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 SUPERFAMILY SSF55804 4 141 9.94E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 Gene3D G3DSA:3.30.1340.10 308 393 4.3E-27 T 14-10-2018 IPR035895 HPr-like superfamily VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 SUPERFAMILY SSF55594 312 399 5.1E-24 T 14-10-2018 IPR035895 HPr-like superfamily VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 313 391 1.9E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VAB027_641 77160e1a4289b1583f8f424c27b4a1fa 400 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 2.5E-30 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 Pfam PF00501 AMP-binding enzyme 31 439 1.4E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 531 3.3E-283 T 14-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 Gene3D G3DSA:2.30.38.10 358 433 1.3E-23 T 14-10-2018 VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 524 3.9E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 Gene3D G3DSA:3.30.300.310 435 538 2.7E-31 T 14-10-2018 VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 Gene3D G3DSA:3.40.50.980 22 174 5.9E-39 T 14-10-2018 VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 SUPERFAMILY SSF56801 6 534 2.88E-134 T 14-10-2018 VAB027_1428 18b20a737c2e821d93d06d5af9e034c0 543 Gene3D G3DSA:3.40.50.980 185 357 5.2E-57 T 14-10-2018 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Gene3D G3DSA:1.20.1640.10 423 607 2.6E-7 T 14-10-2018 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Pfam PF07549 SecD/SecF GG Motif 127 151 1.4E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 SUPERFAMILY SSF82866 407 604 4.05E-41 T 14-10-2018 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Pfam PF02355 Protein export membrane protein 430 599 5.9E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 4.4E-129 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.279 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Gene3D G3DSA:3.30.70.3400 214 292 1.3E-16 T 14-10-2018 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Gene3D G3DSA:3.30.1360.200 293 422 1.6E-23 T 14-10-2018 VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 3.7E-22 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VAB027_481 9ef45bfbd91ed3f167d7f36c288ac009 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 7.3E-74 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_3029 b4ab142886effa55f66e65d708ef4996 385 Pfam PF01098 Cell cycle protein 13 368 3.4E-115 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3029 b4ab142886effa55f66e65d708ef4996 385 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 9 376 41.381 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3029 b4ab142886effa55f66e65d708ef4996 385 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 11 367 1.6E-130 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3029 b4ab142886effa55f66e65d708ef4996 385 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 326 350 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_2242 cd3d50c056302d6f23814a2cf9c31f96 477 Pfam PF07690 Major Facilitator Superfamily 18 408 2.8E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_2242 cd3d50c056302d6f23814a2cf9c31f96 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VAB027_2242 cd3d50c056302d6f23814a2cf9c31f96 477 SUPERFAMILY SSF103473 4 466 1.57E-59 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2242 cd3d50c056302d6f23814a2cf9c31f96 477 Gene3D G3DSA:1.20.1250.20 260 467 1.2E-16 T 14-10-2018 VAB027_2242 cd3d50c056302d6f23814a2cf9c31f96 477 Gene3D G3DSA:1.20.1720.10 13 257 6.7E-49 T 14-10-2018 VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 601 29.962 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 Gene3D G3DSA:1.25.40.10 22 144 2.0E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 Gene3D G3DSA:3.40.50.2300 367 595 5.7E-64 T 14-10-2018 VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 Pfam PF04348 LppC putative lipoprotein 39 599 3.5E-226 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 Gene3D G3DSA:3.40.50.2300 261 594 5.7E-64 T 14-10-2018 VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 Gene3D G3DSA:1.25.40.650 149 255 2.1E-17 T 14-10-2018 VAB027_3263 2d475e68a9e2167a3a1ce7767d4f8461 601 SUPERFAMILY SSF53822 260 598 4.47E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 PRINTS PR00095 Anthranilate synthase component I signature 369 382 2.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 PRINTS PR00095 Anthranilate synthase component I signature 355 368 2.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 PRINTS PR00095 Anthranilate synthase component I signature 449 463 2.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 PRINTS PR00095 Anthranilate synthase component I signature 464 478 2.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 Pfam PF00425 chorismate binding enzyme 247 507 6.7E-86 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 9.0E-229 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 SUPERFAMILY SSF56322 14 515 1.03E-163 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 Gene3D G3DSA:3.60.120.10 7 523 1.7E-187 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 198 6.6E-16 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1855 5e7ab2f8f569c896e4b5bd60b04443ef 523 PIRSF PIRSF001373 3 523 3.1E-256 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1931 fac16fef175e5566c07a9e8c32307ad5 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1931 fac16fef175e5566c07a9e8c32307ad5 377 SUPERFAMILY SSF47240 3 341 1.03E-112 T 14-10-2018 IPR009078 Ferritin-like superfamily VAB027_1931 fac16fef175e5566c07a9e8c32307ad5 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 9.4E-49 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1931 fac16fef175e5566c07a9e8c32307ad5 377 Gene3D G3DSA:1.10.620.20 2 341 1.6E-145 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VAB027_2452 2c2db367d12565a36e16501970fe7506 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 307 1.6E-96 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VAB027_2452 2c2db367d12565a36e16501970fe7506 321 Gene3D G3DSA:3.40.190.170 23 321 2.4E-120 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VAB027_2452 2c2db367d12565a36e16501970fe7506 321 PIRSF PIRSF006470 1 321 5.3E-75 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VAB027_2452 2c2db367d12565a36e16501970fe7506 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 9.9E-76 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VAB027_3582 e9282880a42a91aeca29bbdf14f3647f 307 SUPERFAMILY SSF52283 14 105 3.57E-7 T 14-10-2018 VAB027_3582 e9282880a42a91aeca29bbdf14f3647f 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 5.0E-41 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAB027_3582 e9282880a42a91aeca29bbdf14f3647f 307 Gene3D G3DSA:3.40.50.720 33 299 5.4E-93 T 14-10-2018 VAB027_3582 e9282880a42a91aeca29bbdf14f3647f 307 SUPERFAMILY SSF51735 91 273 3.12E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3582 e9282880a42a91aeca29bbdf14f3647f 307 Gene3D G3DSA:3.40.50.720 91 276 5.4E-93 T 14-10-2018 VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 Pfam PF00005 ABC transporter 24 180 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 SUPERFAMILY SSF52540 31 301 6.66E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.6E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 Gene3D G3DSA:3.40.50.300 1 321 2.1E-96 T 14-10-2018 VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 3.0E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_1775 daa363aab607aaf226ccd9f0ebede8f2 323 SMART SM00382 32 238 5.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:1.10.10.60 420 488 1.4E-12 T 14-10-2018 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF46689 349 486 3.37E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Pfam PF00158 Sigma-54 interaction domain 137 304 4.2E-73 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 SMART SM00382 157 301 4.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 4.6E-30 T 14-10-2018 IPR010518 Flagellar regulatory FleQ VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:3.40.50.2300 1 123 4.9E-10 T 14-10-2018 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 4.5E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF52172 6 182 5.42E-6 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:3.40.50.300 125 308 1.8E-67 T 14-10-2018 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.8E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.8E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:1.10.8.60 309 385 1.2E-24 T 14-10-2018 VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF52540 137 378 3.52E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_2769 7f9c08ad69625fd96645d9669ac959e2 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_262 b550749be84469aba303662c3bbb9391 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 73.306 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAB027_262 b550749be84469aba303662c3bbb9391 361 PIRSF PIRSF001455 17 359 1.2E-107 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAB027_262 b550749be84469aba303662c3bbb9391 361 Pfam PF01761 3-dehydroquinate synthase 67 324 9.2E-114 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAB027_262 b550749be84469aba303662c3bbb9391 361 Gene3D G3DSA:3.40.50.1970 1 171 3.3E-67 T 14-10-2018 VAB027_262 b550749be84469aba303662c3bbb9391 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 4.0E-121 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAB027_262 b550749be84469aba303662c3bbb9391 361 SUPERFAMILY SSF56796 4 356 1.24E-119 T 14-10-2018 VAB027_262 b550749be84469aba303662c3bbb9391 361 Gene3D G3DSA:1.20.1090.10 172 361 4.6E-74 T 14-10-2018 VAB027_953 a9f2c6085d338451ed8d024ebedb5fc7 251 SMART SM00382 30 222 8.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_953 a9f2c6085d338451ed8d024ebedb5fc7 251 Pfam PF00005 ABC transporter 21 176 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_953 a9f2c6085d338451ed8d024ebedb5fc7 251 Gene3D G3DSA:3.40.50.300 6 248 1.7E-63 T 14-10-2018 VAB027_953 a9f2c6085d338451ed8d024ebedb5fc7 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_953 a9f2c6085d338451ed8d024ebedb5fc7 251 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 251 3.2E-126 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VAB027_953 a9f2c6085d338451ed8d024ebedb5fc7 251 SUPERFAMILY SSF52540 5 238 1.08E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2705 2031584ad5383cb7f2bd7a7d2fa55baa 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 21 261 6.3E-21 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VAB027_2705 2031584ad5383cb7f2bd7a7d2fa55baa 295 PIRSF PIRSF003092 7 288 6.7E-86 T 14-10-2018 IPR025501 ATP binding protein MinD VAB027_2705 2031584ad5383cb7f2bd7a7d2fa55baa 295 Gene3D G3DSA:3.40.50.300 22 263 2.2E-58 T 14-10-2018 VAB027_2705 2031584ad5383cb7f2bd7a7d2fa55baa 295 SUPERFAMILY SSF52540 22 282 1.17E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 SUPERFAMILY SSF52964 29 181 1.31E-40 T 14-10-2018 VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Gene3D G3DSA:2.120.10.30 185 450 1.0E-99 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Gene3D G3DSA:3.40.50.10070 23 183 2.7E-49 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 5.4E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF07676 WD40-like Beta Propeller Repeat 301 336 5.4E-14 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 8.5E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 2 446 51.505 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 2.1E-173 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 Pfam PF04052 TolB amino-terminal domain 24 126 3.4E-34 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VAB027_2478 f21498b2bc83484ba9f76b4f9bd2ee45 450 SUPERFAMILY SSF69304 176 448 6.8E-59 T 14-10-2018 VAB027_2196 ed466f199f1f57367efb3e63506db636 253 SUPERFAMILY SSF46785 4 77 4.5E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2196 ed466f199f1f57367efb3e63506db636 253 Pfam PF00455 DeoR C terminal sensor domain 76 234 5.9E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VAB027_2196 ed466f199f1f57367efb3e63506db636 253 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 6.9E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_2196 ed466f199f1f57367efb3e63506db636 253 Gene3D G3DSA:1.10.10.10 2 57 2.6E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2196 ed466f199f1f57367efb3e63506db636 253 SMART SM01134 74 235 1.1E-60 T 14-10-2018 VAB027_2196 ed466f199f1f57367efb3e63506db636 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 2.1E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_2196 ed466f199f1f57367efb3e63506db636 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 2.1E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_2196 ed466f199f1f57367efb3e63506db636 253 SUPERFAMILY SSF100950 75 234 3.68E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_2196 ed466f199f1f57367efb3e63506db636 253 SMART SM00420 7 60 9.1E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_2196 ed466f199f1f57367efb3e63506db636 253 Gene3D G3DSA:3.30.750.70 75 138 1.9E-5 T 14-10-2018 VAB027_1442 4c59b4236c4c796891d39e58f30507cf 227 Gene3D G3DSA:3.40.50.2300 2 144 8.2E-26 T 14-10-2018 VAB027_1442 4c59b4236c4c796891d39e58f30507cf 227 SUPERFAMILY SSF52172 5 146 1.85E-30 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1442 4c59b4236c4c796891d39e58f30507cf 227 Pfam PF12431 Transcriptional regulator 134 162 9.0E-11 T 14-10-2018 IPR028141 Transcriptional regulator VAB027_1442 4c59b4236c4c796891d39e58f30507cf 227 SMART SM00448 5 118 9.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1442 4c59b4236c4c796891d39e58f30507cf 227 PIRSF PIRSF006171 3 227 1.6E-79 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VAB027_1442 4c59b4236c4c796891d39e58f30507cf 227 Pfam PF00072 Response regulator receiver domain 7 117 3.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 74 227 4.0E-17 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 Gene3D G3DSA:3.30.450.330 242 566 4.3E-106 T 14-10-2018 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 Gene3D G3DSA:3.90.1310.30 65 240 1.5E-42 T 14-10-2018 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 SUPERFAMILY SSF56519 69 240 1.44E-41 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 Gene3D G3DSA:3.40.710.10 302 484 4.3E-106 T 14-10-2018 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 SUPERFAMILY SSF56601 241 570 1.14E-90 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 25 577 44.102 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3034 6f5856619a9d97ce5e7022b89b501697 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 562 2.3E-77 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 Gene3D G3DSA:3.50.50.60 1 82 1.7E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 Gene3D G3DSA:3.50.50.60 95 404 6.6E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 47.506 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 SUPERFAMILY SSF54373 270 360 1.57E-16 T 14-10-2018 VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 Gene3D G3DSA:3.30.9.10 134 362 6.6E-53 T 14-10-2018 VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 Pfam PF01266 FAD dependent oxidoreductase 3 397 1.4E-70 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAB027_1438 ef17b5f0a3fd7e0b1af83a7cc26778b7 420 SUPERFAMILY SSF51905 1 416 9.71E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Pfam PF02810 SEC-C motif 883 901 2.0E-10 T 14-10-2018 IPR004027 SEC-C motif VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 SMART SM00958 228 359 3.1E-82 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.1E-67 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.12 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Gene3D G3DSA:3.40.50.300 418 620 1.1E-87 T 14-10-2018 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Pfam PF07517 SecA DEAD-like domain 7 403 7.3E-133 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 SUPERFAMILY SSF81886 620 891 4.45E-85 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 SUPERFAMILY SSF52540 5 416 2.84E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 SUPERFAMILY SSF81767 227 369 4.97E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Gene3D G3DSA:3.90.1440.10 229 369 2.3E-175 T 14-10-2018 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Pfam PF01043 SecA preprotein cross-linking domain 232 359 5.0E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 SUPERFAMILY SSF52540 418 610 2.38E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Gene3D G3DSA:3.40.50.300 22 416 2.3E-175 T 14-10-2018 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 Gene3D G3DSA:1.10.3060.10 621 833 7.8E-77 T 14-10-2018 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 170 190 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 414 427 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 340 362 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 63 87 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 101 115 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 117 127 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_3021 1b665ea68a90974c2cbf6a33b68c14a5 903 PRINTS PR00906 SecA protein signature 377 394 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 SUPERFAMILY SSF111369 169 249 6.54E-5 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Pfam PF13437 HlyD family secretion protein 196 276 1.0E-8 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Gene3D G3DSA:1.10.287.470 99 163 7.7E-11 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Gene3D G3DSA:2.40.50.100 33 66 5.1E-6 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Gene3D G3DSA:2.40.30.170 232 308 2.4E-12 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Gene3D G3DSA:1.10.287.470 67 89 5.1E-6 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 SUPERFAMILY SSF111369 101 158 8.37E-6 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Gene3D G3DSA:2.40.50.100 197 231 2.4E-12 T 14-10-2018 VAB027_2305 84ff51458a97b58413c4d42645e51363 315 Gene3D G3DSA:1.10.287.470 169 196 2.4E-12 T 14-10-2018 VAB027_2602 c279a0b303e6d1d33b81bbf8aae769d7 291 SUPERFAMILY SSF54427 170 290 1.01E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_2602 c279a0b303e6d1d33b81bbf8aae769d7 291 SMART SM00978 160 291 7.3E-35 T 14-10-2018 IPR007379 Tim44-like domain VAB027_2602 c279a0b303e6d1d33b81bbf8aae769d7 291 Pfam PF04280 Tim44-like domain 169 290 3.6E-14 T 14-10-2018 IPR007379 Tim44-like domain VAB027_2602 c279a0b303e6d1d33b81bbf8aae769d7 291 Pfam PF07466 Protein of unknown function (DUF1517) 28 128 1.4E-5 T 14-10-2018 IPR010903 Protein of unknown function DUF1517 VAB027_2602 c279a0b303e6d1d33b81bbf8aae769d7 291 Gene3D G3DSA:3.10.450.240 168 291 4.3E-6 T 14-10-2018 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 Gene3D G3DSA:1.10.1440.20 571 626 3.0E-9 T 14-10-2018 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 Gene3D G3DSA:3.30.499.10 365 570 2.5E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 SUPERFAMILY SSF53732 27 600 1.83E-186 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 Pfam PF00330 Aconitase family (aconitate hydratase) 74 542 1.3E-147 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 195 208 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 209 224 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 411 422 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 142 155 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 166 174 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 271 284 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 285 298 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 473 486 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 PRINTS PR00415 Aconitase family signature 364 378 1.0E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 Pfam PF00694 Aconitase C-terminal domain 665 795 6.9E-31 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 867 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 34 864 1.7E-290 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 Gene3D G3DSA:3.20.19.10 627 866 6.6E-84 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 SUPERFAMILY SSF52016 607 865 2.35E-67 T 14-10-2018 VAB027_2016 810152874158e33b1990aaef0bd8ce98 868 Gene3D G3DSA:3.30.499.20 6 364 2.5E-131 T 14-10-2018 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 SUPERFAMILY SSF50249 2 69 5.57E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.7E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 SMART SM00357 6 70 7.1E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 PIRSF PIRSF002599 1 70 1.0E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_1189 289e93b5fa6254a90f4fda053232c994 70 Gene3D G3DSA:2.40.50.140 2 69 2.9E-29 T 14-10-2018 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 3.7E-102 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 7.6E-114 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.881 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 Gene3D G3DSA:3.40.50.10800 200 295 1.4E-94 T 14-10-2018 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 Gene3D G3DSA:3.40.50.10800 115 340 1.4E-94 T 14-10-2018 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 Gene3D G3DSA:3.40.50.10800 31 322 1.4E-94 T 14-10-2018 VAB027_2475 2b1f23d7c55361448149d3aa32a36eeb 353 SUPERFAMILY SSF142754 29 341 1.83E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 Gene3D G3DSA:3.20.20.370 27 332 1.4E-102 T 14-10-2018 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 SUPERFAMILY SSF51055 334 377 4.45E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 Pfam PF01522 Polysaccharide deacetylase 23 131 5.4E-15 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 SMART SM00495 381 427 4.8 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 SMART SM00495 332 378 2.5E-4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 SUPERFAMILY SSF88713 22 334 2.28E-28 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 Gene3D G3DSA:2.10.10.90 333 427 2.2E-38 T 14-10-2018 VAB027_1956 602a7f2fcf47e36712c39d9b83ac7bee 427 SUPERFAMILY SSF51055 383 426 7.06E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 671 3.7E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 Gene3D G3DSA:3.30.450.20 234 333 2.5E-23 T 14-10-2018 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 SMART SM00283 443 704 4.3E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 SUPERFAMILY SSF58104 396 705 1.7E-69 T 14-10-2018 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 Gene3D G3DSA:3.30.450.20 100 233 2.5E-23 T 14-10-2018 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 Gene3D G3DSA:1.10.287.950 374 706 2.0E-68 T 14-10-2018 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 SMART SM00304 582 652 54.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 SMART SM00304 374 428 2.0E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2502 7cdcee56992f35314b4c81353eb64f27 706 Pfam PF00672 HAMP domain 375 424 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Pfam PF01966 HD domain 229 326 9.3E-9 T 14-10-2018 IPR006674 HD domain VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 SUPERFAMILY SSF81301 1 119 7.08E-30 T 14-10-2018 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Gene3D G3DSA:3.30.460.10 1 121 1.4E-27 T 14-10-2018 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 52.409 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 SUPERFAMILY SSF81891 120 359 1.22E-54 T 14-10-2018 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 PIRSF PIRSF000813 1 403 1.3E-200 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Gene3D G3DSA:1.10.3090.10 122 402 1.1E-43 T 14-10-2018 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.615 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Pfam PF01743 Poly A polymerase head domain 3 122 4.2E-17 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAB027_3073 d275f0d6a7388fe1f3a542e650ba9c8e 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.5E-14 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAB027_2967 6d683883f3fcefee7213880153355556 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.3E-7 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VAB027_2967 6d683883f3fcefee7213880153355556 183 Gene3D G3DSA:3.10.490.10 1 129 2.8E-7 T 14-10-2018 VAB027_2967 6d683883f3fcefee7213880153355556 183 SUPERFAMILY SSF110857 1 123 1.31E-18 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 Gene3D G3DSA:3.40.50.720 104 293 9.0E-113 T 14-10-2018 VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 230 246 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 Gene3D G3DSA:3.40.50.720 34 322 9.0E-113 T 14-10-2018 VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 SUPERFAMILY SSF52283 9 144 1.81E-29 T 14-10-2018 VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 294 1.5E-57 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 SUPERFAMILY SSF51735 108 295 1.44E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1360 2c8d9968abd6ec7795820a3bd3c68d6b 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 325 2.1E-23 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAB027_990 9df1809bff4f11f46caa8d62d46b2f88 244 Gene3D G3DSA:1.10.10.10 9 79 3.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_990 9df1809bff4f11f46caa8d62d46b2f88 244 SUPERFAMILY SSF46785 10 76 3.96E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_990 9df1809bff4f11f46caa8d62d46b2f88 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 4.6E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VAB027_990 9df1809bff4f11f46caa8d62d46b2f88 244 Gene3D G3DSA:3.30.450.40 80 240 1.3E-63 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_990 9df1809bff4f11f46caa8d62d46b2f88 244 Pfam PF09339 IclR helix-turn-helix domain 13 61 7.2E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VAB027_990 9df1809bff4f11f46caa8d62d46b2f88 244 SUPERFAMILY SSF55781 82 240 9.32E-32 T 14-10-2018 VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 SUPERFAMILY SSF50891 1 162 4.24E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 Gene3D G3DSA:2.40.100.10 1 164 8.0E-64 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 1.9E-47 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 PIRSF PIRSF001467 1 163 9.4E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.8E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.8E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.8E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAB027_2492 63d0d45ba8c2b7f357785691c29fc9e2 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VAB027_174 c9608767ebf10a3ab4fbfb478c9b7432 162 Pfam PF00156 Phosphoribosyl transferase domain 65 156 1.8E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAB027_174 c9608767ebf10a3ab4fbfb478c9b7432 162 SUPERFAMILY SSF53271 2 157 8.0E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_174 c9608767ebf10a3ab4fbfb478c9b7432 162 Gene3D G3DSA:3.40.50.2020 18 161 1.5E-16 T 14-10-2018 VAB027_2177 a21f4ea98f6828b2edb86fe1aee1fb85 263 Pfam PF04116 Fatty acid hydroxylase superfamily 89 225 8.0E-26 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 SUPERFAMILY SSF51230 1 92 5.5E-23 T 14-10-2018 IPR011053 Single hybrid motif VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Gene3D G3DSA:3.30.559.10 383 630 4.7E-98 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Gene3D G3DSA:2.40.50.100 104 180 6.6E-20 T 14-10-2018 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 189 630 2.2E-206 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Gene3D G3DSA:2.40.50.100 203 280 2.2E-20 T 14-10-2018 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Gene3D G3DSA:2.40.50.100 1 80 2.2E-20 T 14-10-2018 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Pfam PF02817 e3 binding domain 323 357 6.5E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 126 155 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Pfam PF00364 Biotin-requiring enzyme 104 174 8.2E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Pfam PF00364 Biotin-requiring enzyme 204 274 1.1E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Pfam PF00364 Biotin-requiring enzyme 4 73 5.4E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 SUPERFAMILY SSF51230 202 294 1.19E-22 T 14-10-2018 IPR011053 Single hybrid motif VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 SUPERFAMILY SSF51230 103 194 2.22E-22 T 14-10-2018 IPR011053 Single hybrid motif VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 SUPERFAMILY SSF47005 316 361 8.11E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 SUPERFAMILY SSF52777 388 629 6.23E-83 T 14-10-2018 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Gene3D G3DSA:4.10.320.10 323 367 1.8E-21 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAB027_3038 f1cdd8c445858265efdff5308b9b4b91 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 4.7E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 2.4E-75 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.7E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.7E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.7E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.7E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.049 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_79 91c35441dce8db9d18cc868b231f902d 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VAB027_79 91c35441dce8db9d18cc868b231f902d 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.1E-66 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAB027_348 57469584bdfeabeadb34aa11d4ebb9c4 134 SUPERFAMILY SSF82784 1 131 5.89E-39 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VAB027_348 57469584bdfeabeadb34aa11d4ebb9c4 134 Pfam PF02566 OsmC-like protein 30 127 1.2E-16 T 14-10-2018 IPR003718 OsmC/Ohr family VAB027_348 57469584bdfeabeadb34aa11d4ebb9c4 134 Gene3D G3DSA:2.20.25.10 1 34 1.7E-17 T 14-10-2018 VAB027_348 57469584bdfeabeadb34aa11d4ebb9c4 134 Gene3D G3DSA:3.30.300.20 35 134 3.9E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VAB027_2165 86a6ca711ec07aeb03be942739f8f14e 277 Pfam PF02634 FdhD/NarQ family 35 266 2.3E-75 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VAB027_2165 86a6ca711ec07aeb03be942739f8f14e 277 Gene3D G3DSA:3.40.140.10 122 275 2.3E-43 T 14-10-2018 VAB027_2165 86a6ca711ec07aeb03be942739f8f14e 277 SUPERFAMILY SSF53927 15 267 1.65E-73 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_2165 86a6ca711ec07aeb03be942739f8f14e 277 Gene3D G3DSA:3.10.20.10 36 119 7.8E-10 T 14-10-2018 VAB027_2165 86a6ca711ec07aeb03be942739f8f14e 277 PIRSF PIRSF015626 1 271 5.8E-106 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VAB027_2165 86a6ca711ec07aeb03be942739f8f14e 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.377 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SUPERFAMILY SSF47781 470 557 3.22E-28 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 3.6E-29 T 14-10-2018 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SUPERFAMILY SSF53098 322 469 4.55E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SUPERFAMILY SSF47781 560 632 1.96E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SMART SM00732 326 424 1.6E-39 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Gene3D G3DSA:3.30.420.140 325 451 1.4E-159 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Gene3D G3DSA:1.10.10.650 1 109 3.0E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Gene3D G3DSA:1.10.150.310 499 630 2.4E-51 T 14-10-2018 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.9E-71 T 14-10-2018 IPR018974 Tex-like protein, N-terminal VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Gene3D G3DSA:2.40.50.140 631 725 1.7E-28 T 14-10-2018 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 6.8E-56 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SMART SM00316 649 720 6.0E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SUPERFAMILY SSF50249 637 723 2.24E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Pfam PF00575 S1 RNA binding domain 648 720 2.9E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 Gene3D G3DSA:1.10.3500.10 112 498 1.4E-159 T 14-10-2018 IPR023323 Tex-like domain superfamily VAB027_177 85714bf8e19fa1f252f5e358637d16ca 773 SUPERFAMILY SSF158832 4 321 3.66E-121 T 14-10-2018 VAB027_344 bb8410b1148fda64167698db256f0514 204 Pfam PF01810 LysE type translocator 15 201 3.5E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_344 bb8410b1148fda64167698db256f0514 204 PIRSF PIRSF006324 1 203 1.2E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_2114 1ef901130177c949bc803544cc9219a4 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 2.2E-82 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VAB027_2114 1ef901130177c949bc803544cc9219a4 206 SUPERFAMILY SSF46626 21 202 1.17E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2114 1ef901130177c949bc803544cc9219a4 206 Gene3D G3DSA:1.10.760.10 46 206 1.1E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2114 1ef901130177c949bc803544cc9219a4 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 2.2E-82 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VAB027_2511 0e9748250877e6bc71ffcaddedf31410 703 Gene3D G3DSA:3.20.70.20 1 703 1.5E-298 T 14-10-2018 VAB027_2511 0e9748250877e6bc71ffcaddedf31410 703 SUPERFAMILY SSF51998 4 703 1.03E-259 T 14-10-2018 VAB027_2511 0e9748250877e6bc71ffcaddedf31410 703 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 703 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VAB027_2511 0e9748250877e6bc71ffcaddedf31410 703 PIRSF PIRSF000379 5 698 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VAB027_2511 0e9748250877e6bc71ffcaddedf31410 703 Pfam PF02901 Pyruvate formate lyase-like 21 612 2.6E-205 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VAB027_2511 0e9748250877e6bc71ffcaddedf31410 703 Pfam PF01228 Glycine radical 628 703 3.0E-19 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 1.3E-96 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 Pfam PF05175 Methyltransferase small domain 134 217 2.6E-18 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 PIRSF PIRSF037167 2 307 1.4E-149 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 Gene3D G3DSA:1.10.8.10 16 102 5.4E-6 T 14-10-2018 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 SUPERFAMILY SSF53335 16 293 2.81E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.7E-138 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 Gene3D G3DSA:3.40.50.150 103 281 6.1E-47 T 14-10-2018 VAB027_2750 851e4bb367b40b873bb07f8c0992141e 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.529 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VAB027_2562 92d898ec846400115de350c258ac9f63 619 Pfam PF13624 SurA N-terminal domain 1 166 7.3E-50 T 14-10-2018 VAB027_2562 92d898ec846400115de350c258ac9f63 619 SUPERFAMILY SSF109998 39 241 8.11E-37 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VAB027_2562 92d898ec846400115de350c258ac9f63 619 SUPERFAMILY SSF54534 224 361 3.4E-30 T 14-10-2018 VAB027_2562 92d898ec846400115de350c258ac9f63 619 Gene3D G3DSA:3.10.50.40 262 387 2.5E-34 T 14-10-2018 VAB027_2562 92d898ec846400115de350c258ac9f63 619 Pfam PF13616 PPIC-type PPIASE domain 262 362 3.1E-25 T 14-10-2018 VAB027_2562 92d898ec846400115de350c258ac9f63 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 2.4E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 2.4E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.4E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 Gene3D G3DSA:1.10.1200.120 3 134 1.5E-43 T 14-10-2018 IPR036019 Gated mechanosensitive channel VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 4.4E-46 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.074 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 1.3E-50 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 VAB027_553 60f3c89a293221677ba244d7e017d0c5 136 SUPERFAMILY SSF81330 13 127 9.15E-36 T 14-10-2018 IPR036019 Gated mechanosensitive channel VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 SMART SM00530 31 86 3.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 Gene3D G3DSA:2.60.120.10 93 205 5.2E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 SUPERFAMILY SSF47413 27 90 2.2E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 Pfam PF07883 Cupin domain 145 204 6.4E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 Pfam PF01381 Helix-turn-helix 32 84 7.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 Gene3D G3DSA:1.10.260.40 26 92 5.7E-16 T 14-10-2018 VAB027_774 be11f84a5c004e3338ba0db473af5c61 207 SUPERFAMILY SSF51182 97 204 1.73E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 3.2E-67 T 14-10-2018 IPR000150 Cof family GO:0016787 VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.1E-67 T 14-10-2018 VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 SUPERFAMILY SSF56784 1 265 2.16E-76 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 4.6E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 Gene3D G3DSA:3.30.1240.10 86 191 1.3E-83 T 14-10-2018 VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 Gene3D G3DSA:3.40.50.1000 3 263 1.3E-83 T 14-10-2018 IPR023214 HAD superfamily VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 VAB027_2040 8d188b95bb57da768fd906fea3b11f3a 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 Pfam PF00005 ABC transporter 376 524 6.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 SUPERFAMILY SSF52540 354 592 1.25E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 Gene3D G3DSA:1.20.1560.10 11 340 1.3E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 SMART SM00382 385 568 6.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 SUPERFAMILY SSF90123 12 345 1.02E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 Gene3D G3DSA:3.40.50.300 357 598 9.9E-82 T 14-10-2018 VAB027_2146 346b29bf7af9c9c4d2e6d431487d0756 598 Pfam PF00664 ABC transporter transmembrane region 26 312 6.2E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_1629 dc746d9557c7f63fb9818e1ddaad797c 235 SUPERFAMILY SSF48452 54 129 2.72E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1629 dc746d9557c7f63fb9818e1ddaad797c 235 Gene3D G3DSA:1.25.40.10 49 227 3.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3683 8acad729a671e500262432232ba9fde6 315 Pfam PF05036 Sporulation related domain 62 132 1.2E-4 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAB027_3683 8acad729a671e500262432232ba9fde6 315 SUPERFAMILY SSF110997 61 132 5.49E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 22 118 8.5E-24 T 14-10-2018 IPR029095 NarX-like, N-terminal VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Gene3D G3DSA:1.20.120.960 28 136 6.3E-12 T 14-10-2018 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Pfam PF07730 Histidine kinase 353 421 2.8E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 SMART SM00387 462 555 2.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 SMART SM00304 164 216 1.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Gene3D G3DSA:3.30.565.10 423 559 2.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Gene3D G3DSA:1.10.287.130 161 260 9.3E-7 T 14-10-2018 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Pfam PF00672 HAMP domain 166 211 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 SUPERFAMILY SSF55874 431 550 7.2E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 SUPERFAMILY SSF158472 166 213 7.06E-8 T 14-10-2018 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 PIRSF PIRSF003167 1 562 3.5E-180 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAB027_494 adf2f3b9537c47c0b699d9495f783f50 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 553 1.0E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1215 0f1916c621c63c4509daefa55b75acf6 287 SMART SM00849 37 222 9.8E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_1215 0f1916c621c63c4509daefa55b75acf6 287 SUPERFAMILY SSF56281 10 262 6.16E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_1215 0f1916c621c63c4509daefa55b75acf6 287 Gene3D G3DSA:3.60.15.10 20 256 1.2E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_1215 0f1916c621c63c4509daefa55b75acf6 287 Pfam PF00753 Metallo-beta-lactamase superfamily 37 222 1.6E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 SUPERFAMILY SSF58104 219 517 6.67E-69 T 14-10-2018 VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 Gene3D G3DSA:1.10.287.950 188 517 6.6E-66 T 14-10-2018 VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 SMART SM00283 255 516 9.6E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 Pfam PF08447 PAS fold 32 114 1.8E-19 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 Gene3D G3DSA:3.30.450.20 6 116 8.2E-22 T 14-10-2018 VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 SUPERFAMILY SSF55785 23 114 1.08E-23 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 111 4.8E-11 T 14-10-2018 IPR000014 PAS domain VAB027_1140 a153a0d6d1bf776cd9353939ade1fe10 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 483 2.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1095 84c32e33a3282c8bdead2c50f4f119d6 350 Gene3D G3DSA:3.20.20.70 1 349 8.8E-167 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1095 84c32e33a3282c8bdead2c50f4f119d6 350 Pfam PF00793 DAHP synthetase I family 40 337 8.5E-108 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_1095 84c32e33a3282c8bdead2c50f4f119d6 350 PIRSF PIRSF001361 1 350 6.6E-164 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAB027_1095 84c32e33a3282c8bdead2c50f4f119d6 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 9.2E-171 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAB027_1095 84c32e33a3282c8bdead2c50f4f119d6 350 SUPERFAMILY SSF51569 6 347 1.05E-138 T 14-10-2018 VAB027_1459 18779b3ab4c9dafa0b1db0210b17708b 1103 Gene3D G3DSA:3.40.50.300 899 1094 2.6E-24 T 14-10-2018 VAB027_1459 18779b3ab4c9dafa0b1db0210b17708b 1103 SUPERFAMILY SSF52540 352 1070 1.5E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1459 18779b3ab4c9dafa0b1db0210b17708b 1103 Pfam PF13087 AAA domain 892 1068 9.4E-14 T 14-10-2018 VAB027_1459 18779b3ab4c9dafa0b1db0210b17708b 1103 Pfam PF13086 AAA domain 363 838 1.7E-12 T 14-10-2018 VAB027_400 1287457286dcb301bd12d1eaead9f4b6 236 Gene3D G3DSA:2.40.100.10 91 228 5.0E-47 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_400 1287457286dcb301bd12d1eaead9f4b6 236 Gene3D G3DSA:3.30.1360.40 5 84 4.6E-12 T 14-10-2018 VAB027_400 1287457286dcb301bd12d1eaead9f4b6 236 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 205 2.4E-61 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VAB027_400 1287457286dcb301bd12d1eaead9f4b6 236 SMART SM00796 5 205 2.5E-80 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VAB027_400 1287457286dcb301bd12d1eaead9f4b6 236 SUPERFAMILY SSF50891 92 221 9.1E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VAB027_400 1287457286dcb301bd12d1eaead9f4b6 236 SUPERFAMILY SSF160467 7 97 4.71E-13 T 14-10-2018 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 5.6E-179 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 Pfam PF02274 Amidinotransferase 18 404 1.7E-111 T 14-10-2018 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PIRSF PIRSF006356 1 407 2.6E-151 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 3.3E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 3.3E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 3.3E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.3E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 3.3E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.3E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 Gene3D G3DSA:1.10.3930.10 68 148 2.7E-143 T 14-10-2018 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 43.368 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 Gene3D G3DSA:3.75.10.10 6 404 2.7E-143 T 14-10-2018 VAB027_3407 1f1d9ee33687649ce8b0cad631db05f0 407 SUPERFAMILY SSF55909 4 407 8.39E-126 T 14-10-2018 VAB027_3068 3142941e9694b39afcc711116847519f 226 Gene3D G3DSA:1.20.58.220 1 225 2.2E-63 T 14-10-2018 IPR038078 PhoU-like domain superfamily VAB027_3068 3142941e9694b39afcc711116847519f 226 Pfam PF01865 Protein of unknown function DUF47 7 223 1.7E-65 T 14-10-2018 IPR018445 Putative phosphate transport regulator VAB027_3068 3142941e9694b39afcc711116847519f 226 SUPERFAMILY SSF109755 31 216 2.09E-15 T 14-10-2018 VAB027_3068 3142941e9694b39afcc711116847519f 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 3.4E-68 T 14-10-2018 IPR002727 Protein of unknown function DUF47 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 Gene3D G3DSA:3.40.50.2000 1 164 8.3E-21 T 14-10-2018 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 Pfam PF01522 Polysaccharide deacetylase 405 541 1.2E-33 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 SUPERFAMILY SSF88713 366 563 6.23E-40 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 Gene3D G3DSA:3.20.20.370 338 576 7.3E-59 T 14-10-2018 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 Pfam PF13439 Glycosyltransferase Family 4 13 158 8.6E-24 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 SUPERFAMILY SSF53756 10 338 2.37E-34 T 14-10-2018 VAB027_3611 2cbf1a06aa1e8d41d2b79dfc88745f2c 590 Gene3D G3DSA:3.40.50.2000 165 320 6.7E-6 T 14-10-2018 VAB027_1921 37bb424b3200cd6938f5d19e72ca9644 331 Gene3D G3DSA:1.10.3470.10 4 328 4.8E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1921 37bb424b3200cd6938f5d19e72ca9644 331 Pfam PF01032 FecCD transport family 25 326 3.0E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_1921 37bb424b3200cd6938f5d19e72ca9644 331 SUPERFAMILY SSF81345 7 327 7.19E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1921 37bb424b3200cd6938f5d19e72ca9644 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 31.513 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VAB027_3408 f1562eeda3088520d4726c98a8fa6ba2 481 Gene3D G3DSA:3.30.2290.10 7 240 2.5E-15 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VAB027_3408 f1562eeda3088520d4726c98a8fa6ba2 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.6E-66 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VAB027_3408 f1562eeda3088520d4726c98a8fa6ba2 481 PIRSF PIRSF004919 15 481 1.3E-143 T 14-10-2018 IPR025502 TldD VAB027_3408 f1562eeda3088520d4726c98a8fa6ba2 481 SUPERFAMILY SSF111283 18 480 3.66E-130 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VAB027_3302 7a6f27f8436717385bc9ae8173fc6a03 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 6.2E-30 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAB027_3302 7a6f27f8436717385bc9ae8173fc6a03 65 Gene3D G3DSA:3.30.70.1680 1 58 1.0E-29 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VAB027_3302 7a6f27f8436717385bc9ae8173fc6a03 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 16.928 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAB027_3302 7a6f27f8436717385bc9ae8173fc6a03 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAB027_3302 7a6f27f8436717385bc9ae8173fc6a03 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VAB027_3302 7a6f27f8436717385bc9ae8173fc6a03 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAB027_2493 bb0f88b327b45424bda6425718ad0fdd 246 SUPERFAMILY SSF56300 1 221 8.39E-33 T 14-10-2018 VAB027_2493 bb0f88b327b45424bda6425718ad0fdd 246 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 2.0E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_2493 bb0f88b327b45424bda6425718ad0fdd 246 Gene3D G3DSA:3.60.21.10 1 228 1.3E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_2493 bb0f88b327b45424bda6425718ad0fdd 246 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 230 6.5E-117 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VAB027_2493 bb0f88b327b45424bda6425718ad0fdd 246 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 118.7 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VAB027_2883 ba2801053ed635309b4aaad87a750eae 107 Gene3D G3DSA:1.10.760.10 25 107 8.9E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2883 ba2801053ed635309b4aaad87a750eae 107 Pfam PF00034 Cytochrome c 33 107 2.5E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2883 ba2801053ed635309b4aaad87a750eae 107 SUPERFAMILY SSF46626 8 107 4.73E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF52540 2 205 1.58E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.345 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.0E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.40.50.300 1 185 1.2E-70 T 14-10-2018 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.8E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 5.4E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:2.40.30.10 186 285 2.0E-35 T 14-10-2018 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF00679 Elongation factor G C-terminus 399 481 2.1E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.3380 368 478 2.4E-39 T 14-10-2018 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF50447 165 288 4.32E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.870 286 367 1.2E-35 T 14-10-2018 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 5.6E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF54980 292 370 1.37E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.6E-301 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.2570 479 553 4.3E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_3089 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF54980 399 493 2.45E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.2E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 7.6E-47 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 Pfam PF01467 Cytidylyltransferase-like 345 470 3.1E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.967 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 Gene3D G3DSA:3.40.50.620 323 475 6.6E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 Gene3D G3DSA:3.40.1190.20 5 310 8.8E-111 T 14-10-2018 IPR029056 Ribokinase-like VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 SUPERFAMILY SSF52374 340 471 5.93E-24 T 14-10-2018 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 8.4E-62 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 5.0E-126 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VAB027_3063 66694b2cc525a79dfad1136bb9747d94 476 SUPERFAMILY SSF53613 12 305 6.7E-58 T 14-10-2018 IPR029056 Ribokinase-like VAB027_2316 977acb18146d7a62b000e278bd0912b3 428 SUPERFAMILY SSF161070 1 427 3.4E-109 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VAB027_2316 977acb18146d7a62b000e278bd0912b3 428 Pfam PF00209 Sodium:neurotransmitter symporter family 1 105 6.5E-15 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2316 977acb18146d7a62b000e278bd0912b3 428 Pfam PF00209 Sodium:neurotransmitter symporter family 128 427 2.9E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_693 a0f7ec1655e5d4376380a76d89d08e3d 80 Gene3D G3DSA:3.40.1620.10 1 49 4.9E-7 T 14-10-2018 VAB027_693 a0f7ec1655e5d4376380a76d89d08e3d 80 SUPERFAMILY SSF143120 1 72 6.15E-15 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_693 a0f7ec1655e5d4376380a76d89d08e3d 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 53 3.3E-16 T 14-10-2018 VAB027_693 a0f7ec1655e5d4376380a76d89d08e3d 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.9E-13 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_3560 6340330653bcad0681471551708ad9c7 458 PIRSF PIRSF002746 8 458 1.7E-144 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAB027_3560 6340330653bcad0681471551708ad9c7 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 457 4.2E-105 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAB027_3560 6340330653bcad0681471551708ad9c7 458 Pfam PF02447 GntP family permease 14 456 1.0E-117 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 3.4E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 SUPERFAMILY SSF52467 181 341 4.58E-56 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 SUPERFAMILY SSF52518 1 177 3.21E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 Gene3D G3DSA:3.40.50.970 1 176 1.6E-67 T 14-10-2018 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 Gene3D G3DSA:3.40.50.1220 181 344 3.5E-50 T 14-10-2018 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 SUPERFAMILY SSF52518 358 545 7.51E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 Gene3D G3DSA:3.40.50.970 347 548 1.2E-64 T 14-10-2018 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 5.9E-56 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 1.0E-39 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAB027_20 fe36d906e24db9d5155180ea1dafac87 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.3E-209 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 SMART SM00422 2 70 9.8E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 Gene3D G3DSA:1.10.1660.10 1 106 1.6E-21 T 14-10-2018 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 SUPERFAMILY SSF46955 2 102 9.89E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 Pfam PF13649 Methyltransferase domain 188 282 5.9E-15 T 14-10-2018 VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 SUPERFAMILY SSF53335 132 350 4.67E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_789 64efc7fce0923018cd6596c8cec6fe5a 392 Gene3D G3DSA:3.40.50.150 141 390 1.7E-51 T 14-10-2018 VAB027_1856 0d7941ca47e3256232c899f6d860025d 290 Gene3D G3DSA:3.20.20.140 3 250 1.1E-81 T 14-10-2018 VAB027_1856 0d7941ca47e3256232c899f6d860025d 290 SUPERFAMILY SSF89550 1 275 3.53E-52 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VAB027_1856 0d7941ca47e3256232c899f6d860025d 290 Pfam PF02811 PHP domain 4 181 9.6E-7 T 14-10-2018 IPR004013 PHP domain GO:0003824 VAB027_1856 0d7941ca47e3256232c899f6d860025d 290 Gene3D G3DSA:1.10.150.650 98 169 1.1E-81 T 14-10-2018 VAB027_1856 0d7941ca47e3256232c899f6d860025d 290 SMART SM00481 3 70 3.9E-15 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.3E-161 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 197 210 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 345 356 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 110 118 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 135 150 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 401 414 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 84 97 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 288 302 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 121 134 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 PRINTS PR00415 Aconitase family signature 211 224 6.2E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 9.3E-269 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 SUPERFAMILY SSF53732 5 466 2.09E-167 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 Gene3D G3DSA:3.30.499.20 6 288 3.0E-100 T 14-10-2018 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 467 60.689 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VAB027_3114 a57cbdbba05704774ea18ccf677b02e9 467 Gene3D G3DSA:3.30.499.10 330 467 2.2E-50 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 Pfam PF00089 Trypsin 33 262 1.8E-54 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 213 224 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 212 224 4.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 4.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 61 76 4.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 SUPERFAMILY SSF50494 27 265 1.73E-68 T 14-10-2018 IPR009003 Peptidase S1, PA clan VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 71 76 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 Gene3D G3DSA:2.40.10.10 25 266 9.2E-67 T 14-10-2018 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 514 535 0.0017 T 14-10-2018 IPR020008 GlyGly-CTERM domain VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 SMART SM00020 32 262 6.8E-71 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAB027_2296 005acf6c0ddc4c06cb6eba4432e62da4 538 Gene3D G3DSA:2.60.40.10 267 362 6.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_1427 6fc21618d67677f549d18ec947878d60 293 Gene3D G3DSA:3.40.50.850 1 206 4.2E-87 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 Pfam PF00550 Phosphopantetheine attachment site 224 279 1.2E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PIRSF PIRSF001111 1 291 2.3E-126 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 Gene3D G3DSA:1.10.1200.10 210 288 6.0E-19 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PRINTS PR01398 Isochorismatase signature 61 78 4.9E-51 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PRINTS PR01398 Isochorismatase signature 107 129 4.9E-51 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PRINTS PR01398 Isochorismatase signature 163 181 4.9E-51 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PRINTS PR01398 Isochorismatase signature 2 14 4.9E-51 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PRINTS PR01398 Isochorismatase signature 181 198 4.9E-51 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 PRINTS PR01398 Isochorismatase signature 78 97 4.9E-51 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 Pfam PF00857 Isochorismatase family 30 200 2.4E-36 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VAB027_1427 6fc21618d67677f549d18ec947878d60 293 SUPERFAMILY SSF47336 219 288 8.51E-10 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_1427 6fc21618d67677f549d18ec947878d60 293 SUPERFAMILY SSF52499 2 206 5.63E-59 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_1487 21e4cb1900bb3c09773c501202bab9d8 67 SUPERFAMILY SSF46955 7 56 3.48E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_1487 21e4cb1900bb3c09773c501202bab9d8 67 Gene3D G3DSA:1.10.1660.10 4 58 1.5E-11 T 14-10-2018 VAB027_1487 21e4cb1900bb3c09773c501202bab9d8 67 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 56 7.4E-22 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 VAB027_1487 21e4cb1900bb3c09773c501202bab9d8 67 Pfam PF12728 Helix-turn-helix domain 8 56 3.2E-16 T 14-10-2018 VAB027_1690 93fb2a3b5b4d47ae24734574b7d547ce 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 9.2E-7 T 14-10-2018 VAB027_1690 93fb2a3b5b4d47ae24734574b7d547ce 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 9.2E-7 T 14-10-2018 VAB027_1690 93fb2a3b5b4d47ae24734574b7d547ce 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.0E-35 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VAB027_1690 93fb2a3b5b4d47ae24734574b7d547ce 441 Pfam PF03553 Na+/H+ antiporter family 150 435 6.1E-77 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.289 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 Gene3D G3DSA:3.65.10.10 20 224 1.8E-165 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 PIRSF PIRSF000505 2 426 1.5E-156 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 Gene3D G3DSA:3.65.10.10 242 419 1.8E-165 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.6E-153 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 9.4E-143 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAB027_2375 0ab12afad89eb9b38bbe96b544bb5419 426 SUPERFAMILY SSF55205 1 424 4.45E-144 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 Gene3D G3DSA:3.90.76.10 57 165 1.6E-122 T 14-10-2018 VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 SUPERFAMILY SSF53850 26 516 3.34E-126 T 14-10-2018 VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 Gene3D G3DSA:3.10.105.10 279 494 1.6E-122 T 14-10-2018 VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 426 3.7E-90 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 Gene3D G3DSA:3.40.190.10 32 278 1.6E-122 T 14-10-2018 VAB027_3686 53e2dc7a317732adf1c1cc797d0c139a 518 PIRSF PIRSF002741 21 501 2.0E-95 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAB027_2454 dd85991489e360783ea86b72d71ff9a4 287 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 287 47.598 T 14-10-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 VAB027_2454 dd85991489e360783ea86b72d71ff9a4 287 Pfam PF00480 ROK family 4 285 1.4E-60 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_2454 dd85991489e360783ea86b72d71ff9a4 287 Gene3D G3DSA:3.30.420.40 5 282 1.4E-74 T 14-10-2018 VAB027_2454 dd85991489e360783ea86b72d71ff9a4 287 Gene3D G3DSA:3.30.420.40 118 269 1.4E-74 T 14-10-2018 VAB027_2454 dd85991489e360783ea86b72d71ff9a4 287 ProSitePatterns PS01125 ROK family signature. 128 155 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_2454 dd85991489e360783ea86b72d71ff9a4 287 SUPERFAMILY SSF53067 1 285 7.16E-51 T 14-10-2018 VAB027_231 6de61bd367e7637163184267efeedf49 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.8E-253 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF54849 137 203 3.2E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VAB027_231 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:1.10.560.10 8 521 3.1E-239 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VAB027_231 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF48592 7 521 9.92E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VAB027_231 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:3.30.260.10 138 410 3.1E-239 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VAB027_231 6de61bd367e7637163184267efeedf49 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.524 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAB027_231 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:3.50.7.10 173 379 3.1E-239 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VAB027_231 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF52029 185 376 2.27E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VAB027_231 6de61bd367e7637163184267efeedf49 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.5E-95 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VAB027_2688 c7768717b07c5201974234fcdcdf03b3 158 Gene3D G3DSA:1.10.8.640 20 104 1.0E-36 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VAB027_2688 c7768717b07c5201974234fcdcdf03b3 158 Pfam PF03918 Cytochrome C biogenesis protein 9 150 7.0E-57 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 2.4E-287 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 2.0E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 SUPERFAMILY SSF51621 6 876 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 Gene3D G3DSA:1.20.1440.90 304 386 3.1E-23 T 14-10-2018 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_245 b8ce42e0c1e1f56e7942fac8d0df3c41 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 17.921 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAB027_3500 4254f1bd2a923d51d2fce7b23ac7d609 181 SMART SM00479 7 180 6.6E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_3500 4254f1bd2a923d51d2fce7b23ac7d609 181 SUPERFAMILY SSF53098 3 180 7.01E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3500 4254f1bd2a923d51d2fce7b23ac7d609 181 Gene3D G3DSA:3.30.420.10 1 181 6.3E-75 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_3500 4254f1bd2a923d51d2fce7b23ac7d609 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.141 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 VAB027_3500 4254f1bd2a923d51d2fce7b23ac7d609 181 Pfam PF00929 Exonuclease 9 170 3.0E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_845 22714d55e658a25a93e91f9484b546e6 280 PRINTS PR00169 Potassium channel signature 119 142 1.4E-7 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VAB027_845 22714d55e658a25a93e91f9484b546e6 280 PRINTS PR00169 Potassium channel signature 149 171 1.4E-7 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VAB027_845 22714d55e658a25a93e91f9484b546e6 280 PRINTS PR00169 Potassium channel signature 178 204 1.4E-7 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VAB027_845 22714d55e658a25a93e91f9484b546e6 280 Gene3D G3DSA:1.20.120.350 13 117 1.6E-8 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily VAB027_845 22714d55e658a25a93e91f9484b546e6 280 Pfam PF07885 Ion channel 128 205 1.8E-17 T 14-10-2018 IPR013099 Potassium channel domain VAB027_845 22714d55e658a25a93e91f9484b546e6 280 Gene3D G3DSA:1.10.287.70 118 168 1.5E-12 T 14-10-2018 VAB027_845 22714d55e658a25a93e91f9484b546e6 280 SUPERFAMILY SSF81324 21 206 3.21E-37 T 14-10-2018 VAB027_845 22714d55e658a25a93e91f9484b546e6 280 Gene3D G3DSA:1.20.5.110 170 212 6.6E-18 T 14-10-2018 VAB027_732 79c8b438243d3efb748ac54887c02d28 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 89 2.4E-27 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_732 79c8b438243d3efb748ac54887c02d28 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 2 89 1.5E-30 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin VAB027_732 79c8b438243d3efb748ac54887c02d28 89 SUPERFAMILY SSF143011 1 89 2.88E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_732 79c8b438243d3efb748ac54887c02d28 89 Gene3D G3DSA:3.30.2310.20 1 89 8.3E-33 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_732 79c8b438243d3efb748ac54887c02d28 89 PIRSF PIRSF006156 1 89 8.5E-24 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin VAB027_218 213eb4e944f756dc679446be7fea2f32 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 Gene3D G3DSA:3.40.50.2300 56 306 6.4E-83 T 14-10-2018 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 SUPERFAMILY SSF53822 60 332 3.34E-91 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_218 213eb4e944f756dc679446be7fea2f32 335 Gene3D G3DSA:1.10.260.40 1 55 2.9E-26 T 14-10-2018 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.4E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 SUPERFAMILY SSF47413 1 59 2.16E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 SMART SM00354 1 71 7.9E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 Gene3D G3DSA:3.40.50.2300 160 289 6.4E-83 T 14-10-2018 VAB027_218 213eb4e944f756dc679446be7fea2f32 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.7E-43 T 14-10-2018 VAB027_1972 0492941fb2c403a9028e75aa36995d69 282 SUPERFAMILY SSF53613 9 272 6.39E-82 T 14-10-2018 IPR029056 Ribokinase-like VAB027_1972 0492941fb2c403a9028e75aa36995d69 282 Pfam PF08543 Phosphomethylpyrimidine kinase 19 267 4.0E-95 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VAB027_1972 0492941fb2c403a9028e75aa36995d69 282 Gene3D G3DSA:3.40.1190.20 1 282 4.7E-102 T 14-10-2018 IPR029056 Ribokinase-like VAB027_1972 0492941fb2c403a9028e75aa36995d69 282 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 12 269 4.8E-99 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAB027_3243 5597c30bc153c5e4ead5d0c24f5bd57e 126 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.3E-42 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAB027_3243 5597c30bc153c5e4ead5d0c24f5bd57e 126 PIRSF PIRSF006287 1 123 5.3E-50 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAB027_3243 5597c30bc153c5e4ead5d0c24f5bd57e 126 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 8.0E-65 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAB027_3243 5597c30bc153c5e4ead5d0c24f5bd57e 126 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 31.579 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 Hamap MF_00492 Transaldolase [tal]. 2 316 51.322 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 Gene3D G3DSA:3.20.20.70 2 316 1.3E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 8.0E-155 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 SUPERFAMILY SSF51569 1 315 6.07E-115 T 14-10-2018 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 7.6E-102 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAB027_544 946294f84e7c261c6eb2b454fa6bfe96 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 7.3E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 SUPERFAMILY SSF51735 143 307 3.94E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 Gene3D G3DSA:3.40.50.720 155 288 1.4E-117 T 14-10-2018 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 SUPERFAMILY SSF50129 3 175 9.43E-53 T 14-10-2018 IPR011032 GroES-like superfamily VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.534 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 4.3E-180 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 SMART SM00829 14 340 1.8E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 Gene3D G3DSA:3.90.180.10 22 330 1.4E-117 T 14-10-2018 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VAB027_1229 3188fe08386dc13755b20ab741e4d348 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 2.4E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VAB027_3455 f19e618ceff60751083134cc79860531 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_3455 f19e618ceff60751083134cc79860531 327 Gene3D G3DSA:3.20.20.70 4 245 3.2E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3455 f19e618ceff60751083134cc79860531 327 SUPERFAMILY SSF51395 6 319 2.89E-78 T 14-10-2018 VAB027_3455 f19e618ceff60751083134cc79860531 327 PIRSF PIRSF006621 1 325 4.8E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_3455 f19e618ceff60751083134cc79860531 327 Gene3D G3DSA:1.20.120.1460 248 324 7.9E-23 T 14-10-2018 VAB027_3455 f19e618ceff60751083134cc79860531 327 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 319 1.9E-160 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VAB027_3455 f19e618ceff60751083134cc79860531 327 Pfam PF01207 Dihydrouridine synthase (Dus) 9 316 1.7E-94 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_3455 f19e618ceff60751083134cc79860531 327 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.431 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VAB027_2842 010caa95f428d7d7b7d0b9288c82d2a9 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 128 7.8E-29 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VAB027_2842 010caa95f428d7d7b7d0b9288c82d2a9 131 PIRSF PIRSF002889 1 131 1.7E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VAB027_303 915c16648ce959a20515874ad2375dec 1074 Pfam PF17291 N-terminal domain of M60-like peptidases 521 623 8.2E-6 T 14-10-2018 IPR035423 M60-like domain, N-terminal VAB027_303 915c16648ce959a20515874ad2375dec 1074 SMART SM01276 539 866 1.5E-27 T 14-10-2018 IPR031161 Peptidase family M60 domain VAB027_666 830ad33ed5d145ee3cb529d52cb1c797 212 Gene3D G3DSA:2.160.10.10 2 210 7.7E-75 T 14-10-2018 VAB027_666 830ad33ed5d145ee3cb529d52cb1c797 212 SUPERFAMILY SSF51161 31 204 4.44E-47 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_666 830ad33ed5d145ee3cb529d52cb1c797 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 2.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_666 830ad33ed5d145ee3cb529d52cb1c797 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_2254 ae8ba562938bd02abc1c3f1f1af007c3 472 Gene3D G3DSA:1.20.1600.10 21 453 2.1E-59 T 14-10-2018 VAB027_2254 ae8ba562938bd02abc1c3f1f1af007c3 472 SUPERFAMILY SSF56954 2 445 3.79E-66 T 14-10-2018 VAB027_2254 ae8ba562938bd02abc1c3f1f1af007c3 472 Pfam PF02321 Outer membrane efflux protein 26 243 6.4E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2254 ae8ba562938bd02abc1c3f1f1af007c3 472 Pfam PF02321 Outer membrane efflux protein 265 445 6.4E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2182 159dc3d2fa25970b8e9576a368f5a31e 67 PIRSF PIRSF037225 1 65 3.3E-26 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VAB027_2182 159dc3d2fa25970b8e9576a368f5a31e 67 Pfam PF14255 Cysteine-rich CPXCG 9 60 7.4E-21 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 SMART SM00448 9 121 4.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 SMART SM00471 170 321 1.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 Pfam PF13487 HD domain 233 303 4.3E-18 T 14-10-2018 VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 Gene3D G3DSA:1.10.3210.10 148 365 1.5E-73 T 14-10-2018 VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 Gene3D G3DSA:3.40.50.2300 1 138 1.1E-36 T 14-10-2018 VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 Pfam PF00072 Response regulator receiver domain 11 121 8.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 SUPERFAMILY SSF52172 8 153 1.29E-37 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2025 eab400b3e1934397044b93fb0c42ce3f 379 SUPERFAMILY SSF109604 151 348 1.1E-31 T 14-10-2018 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 SUPERFAMILY SSF49472 19 127 4.71E-36 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 21 126 2.8E-37 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 Gene3D G3DSA:2.60.40.180 18 127 9.5E-36 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 Pfam PF00576 HIUase/Transthyretin family 22 126 2.2E-33 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 PRINTS PR00189 Transthyretin signature 105 127 1.0E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 PRINTS PR00189 Transthyretin signature 21 41 1.0E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 ProSitePatterns PS00768 Transthyretin signature 1. 25 40 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_1253 976676e48e3c8ec4f631fd23bc8e434e 127 SMART SM00095 17 127 0.0066 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 SUPERFAMILY SSF56042 142 301 1.27E-34 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 27.81 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 299 6.4E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 Gene3D G3DSA:3.30.1330.10 1 143 2.3E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 SUPERFAMILY SSF55326 3 137 4.45E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 PIRSF PIRSF005303 1 320 2.3E-85 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 Gene3D G3DSA:3.90.650.10 144 321 2.9E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 5.2E-105 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VAB027_2906 37971a09b72f2f545b48ea13c72692d6 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 136 3.3E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VAB027_388 d573684e4e6f9bb0a7f86c298dc1bd0e 195 PIRSF PIRSF020606 2 195 6.7E-83 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VAB027_388 d573684e4e6f9bb0a7f86c298dc1bd0e 195 Pfam PF09997 Predicted membrane protein (DUF2238) 40 176 1.4E-51 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 Gene3D G3DSA:3.40.50.300 2 217 2.8E-79 T 14-10-2018 VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 SMART SM00487 25 229 4.1E-64 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 SUPERFAMILY SSF52540 81 367 3.72E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 Pfam PF00270 DEAD/DEAH box helicase 30 202 1.6E-52 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 Gene3D G3DSA:3.40.50.300 221 421 1.8E-47 T 14-10-2018 VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 Pfam PF00271 Helicase conserved C-terminal domain 240 346 3.3E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_407 eb7e2bb3831e83c5ff8f1a9e04bdb320 422 SMART SM00490 265 346 1.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.8E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.6E-12 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.6E-12 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.6E-12 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.6E-12 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-6 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-6 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-6 T 14-10-2018 VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 SUPERFAMILY SSF51905 3 347 5.11E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_2534 3c8efbea0a1f401f25106ee1ed56df7d 429 Gene3D G3DSA:3.50.50.100 1 406 2.6E-114 T 14-10-2018 VAB027_1364 aa97db4098f46099f343ca41656446da 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 4.6E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VAB027_1364 aa97db4098f46099f343ca41656446da 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 4.3E-120 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VAB027_39 665552d1fb91059b620551663a3bfba8 377 SUPERFAMILY SSF51246 299 373 9.42E-19 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAB027_39 665552d1fb91059b620551663a3bfba8 377 Gene3D G3DSA:3.30.1490.20 92 177 1.2E-21 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_39 665552d1fb91059b620551663a3bfba8 377 SUPERFAMILY SSF56059 92 295 8.13E-56 T 14-10-2018 VAB027_39 665552d1fb91059b620551663a3bfba8 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.767 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VAB027_39 665552d1fb91059b620551663a3bfba8 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 1.1E-105 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VAB027_39 665552d1fb91059b620551663a3bfba8 377 Pfam PF02222 ATP-grasp domain 101 274 3.5E-51 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VAB027_39 665552d1fb91059b620551663a3bfba8 377 SUPERFAMILY SSF52440 1 88 2.59E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_39 665552d1fb91059b620551663a3bfba8 377 Gene3D G3DSA:3.40.50.20 1 78 2.0E-19 T 14-10-2018 VAB027_39 665552d1fb91059b620551663a3bfba8 377 Gene3D G3DSA:3.30.470.20 178 369 1.7E-69 T 14-10-2018 VAB027_3613 bc2ca47bf051f68a89dfa6cace44ee65 404 Pfam PF04932 O-Antigen ligase 180 329 1.4E-21 T 14-10-2018 IPR007016 O-antigen ligase-related VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 1.2E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 Gene3D G3DSA:1.10.155.10 1 74 4.5E-11 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.7E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 SMART SM00138 8 272 1.2E-132 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 Gene3D G3DSA:3.40.50.150 75 274 1.4E-59 T 14-10-2018 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 6.8E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 6.8E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.8E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 6.8E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 6.8E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 6.8E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 SUPERFAMILY SSF53335 76 269 2.09E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2843 e3b3b6d9b08738fe9335e8cf59733d53 275 SUPERFAMILY SSF47757 3 75 2.22E-15 T 14-10-2018 VAB027_959 afad209598529ad56c1626df46e2d80b 480 Pfam PF07603 Protein of unknown function (DUF1566) 296 434 6.0E-14 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 VAB027_2772 4058dc89a6fa5e5e935f84b565a36538 666 Pfam PF07196 Flagellin hook IN motif 125 178 1.3E-7 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAB027_2772 4058dc89a6fa5e5e935f84b565a36538 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 2.4E-21 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VAB027_2772 4058dc89a6fa5e5e935f84b565a36538 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 430 655 2.0E-55 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 Pfam PF13638 PIN domain 9 149 1.3E-34 T 14-10-2018 IPR002716 PIN domain VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 Pfam PF02562 PhoH-like protein 248 452 9.5E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 SUPERFAMILY SSF52540 157 437 2.08E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 SMART SM00670 7 141 4.1E-8 T 14-10-2018 IPR002716 PIN domain VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 Gene3D G3DSA:3.40.50.1010 3 155 4.5E-27 T 14-10-2018 VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 SUPERFAMILY SSF88723 7 157 7.06E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily VAB027_1357 9872ae0aa824ded3f618df3a4fe9872f 458 Gene3D G3DSA:3.40.50.300 246 456 5.8E-65 T 14-10-2018 VAB027_36 979bd3b0495f6330651716424c35bcfb 371 Gene3D G3DSA:1.10.10.10 302 367 6.2E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_36 979bd3b0495f6330651716424c35bcfb 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 287 2.5E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VAB027_36 979bd3b0495f6330651716424c35bcfb 371 Gene3D G3DSA:3.40.50.450 1 291 8.9E-99 T 14-10-2018 VAB027_36 979bd3b0495f6330651716424c35bcfb 371 SUPERFAMILY SSF102405 81 288 7.59E-45 T 14-10-2018 VAB027_36 979bd3b0495f6330651716424c35bcfb 371 Pfam PF02481 DNA recombination-mediator protein A 77 278 6.6E-80 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VAB027_1242 fbc0e0bc5816d037ac9f7086395bd0df 64 Pfam PF14549 DNA-binding transcriptional regulator Cro 9 48 1.4E-14 T 14-10-2018 VAB027_1242 fbc0e0bc5816d037ac9f7086395bd0df 64 Gene3D G3DSA:1.10.260.40 8 56 2.7E-14 T 14-10-2018 VAB027_1242 fbc0e0bc5816d037ac9f7086395bd0df 64 SUPERFAMILY SSF47413 10 53 7.31E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1132 2a5adc7004738931b2889f35addd0497 323 PIRSF PIRSF028188 4 322 9.2E-158 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VAB027_1132 2a5adc7004738931b2889f35addd0497 323 Gene3D G3DSA:3.75.10.10 18 314 1.1E-43 T 14-10-2018 VAB027_1132 2a5adc7004738931b2889f35addd0497 323 Pfam PF02274 Amidinotransferase 24 319 1.1E-73 T 14-10-2018 VAB027_1132 2a5adc7004738931b2889f35addd0497 323 SUPERFAMILY SSF55909 20 316 9.53E-38 T 14-10-2018 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 Gene3D G3DSA:3.40.50.2020 7 302 4.6E-135 T 14-10-2018 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.609 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.4E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.2E-125 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.4E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 Gene3D G3DSA:3.40.50.2020 148 290 4.6E-135 T 14-10-2018 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 SMART SM01400 4 121 1.6E-76 T 14-10-2018 VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 SUPERFAMILY SSF53271 69 306 4.53E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_2809 921aae6c9423cdb5dfa0cf3f633f732a 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 Gene3D G3DSA:3.30.390.50 250 338 1.4E-27 T 14-10-2018 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 Gene3D G3DSA:3.30.930.10 3 249 1.4E-82 T 14-10-2018 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 SUPERFAMILY SSF55681 3 247 1.91E-72 T 14-10-2018 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 323 1.1E-109 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 SUPERFAMILY SSF82649 248 337 7.85E-25 T 14-10-2018 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 58.895 T 14-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 55 157 8.3E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAB027_2063 e6d20f3d897438e4f996e7e6c92e6b3b 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 249 332 1.2E-18 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 VAB027_2311 fee696a156d4939c86bff24f69cf690d 382 PIRSF PIRSF029172 1 380 5.6E-181 T 14-10-2018 IPR027020 Protein ynjB VAB027_2311 fee696a156d4939c86bff24f69cf690d 382 Gene3D G3DSA:3.40.190.10 29 158 1.1E-5 T 14-10-2018 VAB027_2311 fee696a156d4939c86bff24f69cf690d 382 Pfam PF13416 Bacterial extracellular solute-binding protein 57 326 2.8E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_2311 fee696a156d4939c86bff24f69cf690d 382 Gene3D G3DSA:3.40.190.10 159 329 2.2E-11 T 14-10-2018 VAB027_2311 fee696a156d4939c86bff24f69cf690d 382 SUPERFAMILY SSF53850 31 377 4.43E-41 T 14-10-2018 VAB027_2930 36a7c80d47505edbca96c4654f6d88ab 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 4.4E-107 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VAB027_2930 36a7c80d47505edbca96c4654f6d88ab 198 PIRSF PIRSF006102 1 198 3.3E-67 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_2930 36a7c80d47505edbca96c4654f6d88ab 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.7E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_2930 36a7c80d47505edbca96c4654f6d88ab 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.95 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VAB027_1431 a6a908ce6e1141a2d9e8d054ae01a43b 375 SUPERFAMILY SSF52777 177 359 4.34E-23 T 14-10-2018 VAB027_1431 a6a908ce6e1141a2d9e8d054ae01a43b 375 Gene3D G3DSA:3.30.559.10 1 186 8.2E-60 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAB027_1431 a6a908ce6e1141a2d9e8d054ae01a43b 375 Pfam PF00668 Condensation domain 4 326 7.9E-39 T 14-10-2018 IPR001242 Condensation domain VAB027_1431 a6a908ce6e1141a2d9e8d054ae01a43b 375 Gene3D G3DSA:3.30.559.30 191 372 7.9E-34 T 14-10-2018 VAB027_1431 a6a908ce6e1141a2d9e8d054ae01a43b 375 SUPERFAMILY SSF52777 4 170 9.34E-30 T 14-10-2018 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 Gene3D G3DSA:3.30.950.10 150 276 7.9E-46 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 39 53 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 34 267 9.4E-93 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 36 245 2.8E-47 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 SUPERFAMILY SSF53790 31 277 1.57E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 Gene3D G3DSA:3.40.1010.10 32 149 2.9E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VAB027_1308 70dd70cd7b332098db78b19fc035b6f5 288 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 114 147 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAB027_3553 ef30d5531553352e663441ad265ed736 287 Pfam PF01207 Dihydrouridine synthase (Dus) 1 279 3.2E-100 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_3553 ef30d5531553352e663441ad265ed736 287 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_3553 ef30d5531553352e663441ad265ed736 287 SUPERFAMILY SSF51395 2 284 6.96E-77 T 14-10-2018 VAB027_3553 ef30d5531553352e663441ad265ed736 287 Gene3D G3DSA:1.10.1200.80 217 287 3.0E-8 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VAB027_3553 ef30d5531553352e663441ad265ed736 287 PIRSF PIRSF006621 1 286 4.1E-88 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAB027_3553 ef30d5531553352e663441ad265ed736 287 Gene3D G3DSA:3.20.20.70 1 205 1.2E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3553 ef30d5531553352e663441ad265ed736 287 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 285 3.9E-117 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VAB027_29 bed16be04d4dacfda10ef8852a5e9c25 185 Pfam PF11355 Protein of unknown function (DUF3157) 3 184 4.8E-66 T 14-10-2018 IPR021501 Protein of unknown function DUF3157 VAB027_3099 a488e2e3705766d95052a3166da751da 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 9.4E-20 T 14-10-2018 VAB027_3099 a488e2e3705766d95052a3166da751da 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.4E-20 T 14-10-2018 VAB027_3099 a488e2e3705766d95052a3166da751da 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 9.4E-20 T 14-10-2018 VAB027_3099 a488e2e3705766d95052a3166da751da 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 9.4E-20 T 14-10-2018 VAB027_3099 a488e2e3705766d95052a3166da751da 408 Gene3D G3DSA:3.30.9.50 79 269 1.8E-122 T 14-10-2018 VAB027_3099 a488e2e3705766d95052a3166da751da 408 Pfam PF01494 FAD binding domain 4 347 1.1E-28 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VAB027_3099 a488e2e3705766d95052a3166da751da 408 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 6.9E-138 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VAB027_3099 a488e2e3705766d95052a3166da751da 408 Gene3D G3DSA:3.50.50.60 5 338 1.8E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3099 a488e2e3705766d95052a3166da751da 408 SUPERFAMILY SSF51905 4 384 2.29E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3099 a488e2e3705766d95052a3166da751da 408 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VAB027_1954 fa37f272fdbac848877240b3a8a1a3e9 159 Gene3D G3DSA:1.10.10.10 1 146 1.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1954 fa37f272fdbac848877240b3a8a1a3e9 159 Pfam PF01047 MarR family 31 90 1.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1954 fa37f272fdbac848877240b3a8a1a3e9 159 SUPERFAMILY SSF46785 5 142 6.34E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1954 fa37f272fdbac848877240b3a8a1a3e9 159 SMART SM00347 24 125 1.5E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1954 fa37f272fdbac848877240b3a8a1a3e9 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_1954 fa37f272fdbac848877240b3a8a1a3e9 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3666 0ed6e417a880b34395b5f1f4508f9224 282 SUPERFAMILY SSF46689 1 78 3.4E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3666 0ed6e417a880b34395b5f1f4508f9224 282 Gene3D G3DSA:1.10.10.10 1 80 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3666 0ed6e417a880b34395b5f1f4508f9224 282 SUPERFAMILY SSF53697 99 279 2.09E-37 T 14-10-2018 VAB027_3666 0ed6e417a880b34395b5f1f4508f9224 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 1.6E-21 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VAB027_3666 0ed6e417a880b34395b5f1f4508f9224 282 Gene3D G3DSA:3.40.50.10490 97 276 3.5E-40 T 14-10-2018 VAB027_3666 0ed6e417a880b34395b5f1f4508f9224 282 Pfam PF01380 SIS domain 130 256 3.4E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_3632 2ebcb25dc395f35c8cdb08c6ae7775a0 78 SUPERFAMILY SSF143800 2 76 6.47E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3632 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Gene3D G3DSA:2.30.170.40 2 78 8.3E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3632 2ebcb25dc395f35c8cdb08c6ae7775a0 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.3E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3632 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Pfam PF00830 Ribosomal L28 family 3 62 8.4E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3632 2ebcb25dc395f35c8cdb08c6ae7775a0 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.185 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_929 c5dfa463ca4a8544c4e6e6c43bb857f3 118 SUPERFAMILY SSF52821 14 115 3.4E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_929 c5dfa463ca4a8544c4e6e6c43bb857f3 118 Gene3D G3DSA:3.40.250.10 24 117 1.2E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_929 c5dfa463ca4a8544c4e6e6c43bb857f3 118 Pfam PF00581 Rhodanese-like domain 27 105 1.7E-12 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_929 c5dfa463ca4a8544c4e6e6c43bb857f3 118 SMART SM00450 25 118 2.5E-20 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 SUPERFAMILY SSF55120 6 337 6.91E-97 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 341 28.728 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 336 1.8E-20 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 1.8E-40 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 Gene3D G3DSA:3.30.2350.20 18 336 7.1E-105 T 14-10-2018 VAB027_3319 00dcae76f2d4df0d10155b770f3c7b38 361 Gene3D G3DSA:3.30.2340.10 170 301 7.1E-105 T 14-10-2018 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 143 8.0E-67 T 14-10-2018 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.3E-67 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.257 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 SUPERFAMILY SSF52304 6 147 1.24E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 Pfam PF01220 Dehydroquinase class II 6 142 1.4E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 PIRSF PIRSF001399 3 149 1.0E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_3549 b5d38bead82d7e8e5ae94df98cf9d817 150 Gene3D G3DSA:3.40.50.9100 1 149 8.2E-67 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAB027_1955 69f7834f310933c148452fc0dad45cd0 534 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VAB027_1955 69f7834f310933c148452fc0dad45cd0 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 6.4E-176 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAB027_1955 69f7834f310933c148452fc0dad45cd0 534 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 1.2E-138 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAB027_1787 cefaa71397991a62415a1d7477d25add 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 153 2.8E-8 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAB027_1787 cefaa71397991a62415a1d7477d25add 206 Gene3D G3DSA:3.10.450.50 126 206 7.5E-9 T 14-10-2018 VAB027_1787 cefaa71397991a62415a1d7477d25add 206 Pfam PF02810 SEC-C motif 188 206 2.0E-9 T 14-10-2018 IPR004027 SEC-C motif VAB027_1787 cefaa71397991a62415a1d7477d25add 206 SUPERFAMILY SSF103642 186 205 6.87E-7 T 14-10-2018 VAB027_1514 daee25f4baf912f2e0d3777ae710158b 231 SUPERFAMILY SSF118196 1 225 1.09E-77 T 14-10-2018 IPR036413 YaeB-like superfamily VAB027_1514 daee25f4baf912f2e0d3777ae710158b 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VAB027_1514 daee25f4baf912f2e0d3777ae710158b 231 Gene3D G3DSA:3.30.2310.10 145 227 2.3E-21 T 14-10-2018 VAB027_1514 daee25f4baf912f2e0d3777ae710158b 231 Gene3D G3DSA:2.40.30.70 22 144 1.8E-44 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily VAB027_1514 daee25f4baf912f2e0d3777ae710158b 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.7E-38 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VAB027_1514 daee25f4baf912f2e0d3777ae710158b 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 1.4E-47 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VAB027_33 4686bbb1aa291899253c474f28387164 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 315 36.901 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VAB027_33 4686bbb1aa291899253c474f28387164 315 Gene3D G3DSA:3.10.25.10 210 314 6.8E-39 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_33 4686bbb1aa291899253c474f28387164 315 Pfam PF00551 Formyl transferase 6 183 5.4E-48 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_33 4686bbb1aa291899253c474f28387164 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_33 4686bbb1aa291899253c474f28387164 315 SUPERFAMILY SSF53328 5 210 9.42E-68 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_33 4686bbb1aa291899253c474f28387164 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 8.8E-29 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAB027_33 4686bbb1aa291899253c474f28387164 315 Gene3D G3DSA:3.40.50.170 1 209 3.5E-89 T 14-10-2018 VAB027_33 4686bbb1aa291899253c474f28387164 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 7.7E-109 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VAB027_33 4686bbb1aa291899253c474f28387164 315 SUPERFAMILY SSF50486 208 310 3.14E-32 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Gene3D G3DSA:3.30.70.3400 219 439 3.0E-49 T 14-10-2018 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.4E-37 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 47.68 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Gene3D G3DSA:3.30.1360.200 280 433 3.0E-49 T 14-10-2018 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 PRINTS PR00702 Acriflavin resistance protein family signature 505 529 3.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 3.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 PRINTS PR00702 Acriflavin resistance protein family signature 580 603 3.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 4.6E-150 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Pfam PF02355 Protein export membrane protein 435 596 3.6E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 596 1.2E-82 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 Gene3D G3DSA:1.20.1640.10 450 602 1.3E-7 T 14-10-2018 VAB027_1399 cb4df0f8ce530c68e7bffd9fd12cf501 617 SUPERFAMILY SSF82866 412 608 1.2E-44 T 14-10-2018 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 Pfam PF02107 Flagellar L-ring protein 80 255 1.9E-57 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 PRINTS PR01008 Flagellar L-ring protein signature 221 235 4.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 PRINTS PR01008 Flagellar L-ring protein signature 237 251 4.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 PRINTS PR01008 Flagellar L-ring protein signature 200 216 4.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 PRINTS PR01008 Flagellar L-ring protein signature 102 114 4.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 PRINTS PR01008 Flagellar L-ring protein signature 174 189 4.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_2836 0895b80834dfedb5b7a370ffca4f6613 258 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 258 28.162 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAB027_3502 6dd10d59ec6744d2c2c77849561d7931 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 3.8E-89 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VAB027_3502 6dd10d59ec6744d2c2c77849561d7931 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 281 2.9E-62 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VAB027_3502 6dd10d59ec6744d2c2c77849561d7931 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.812 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VAB027_2721 c722e82551746932e40fe511b429da19 388 SUPERFAMILY SSF56059 1 238 1.71E-78 T 14-10-2018 VAB027_2721 c722e82551746932e40fe511b429da19 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.142 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2721 c722e82551746932e40fe511b429da19 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.9E-172 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2721 c722e82551746932e40fe511b429da19 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_2721 c722e82551746932e40fe511b429da19 388 Pfam PF00549 CoA-ligase 262 382 2.0E-24 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_2721 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.30.470.20 1 234 4.4E-92 T 14-10-2018 VAB027_2721 c722e82551746932e40fe511b429da19 388 SUPERFAMILY SSF52210 240 385 2.49E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_2721 c722e82551746932e40fe511b429da19 388 Pfam PF08442 ATP-grasp domain 2 203 5.1E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2721 c722e82551746932e40fe511b429da19 388 PIRSF PIRSF001554 1 388 2.8E-154 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2721 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.30.1490.20 21 104 4.4E-92 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_2721 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.40.50.261 240 388 4.5E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_3722 a268cff73b24e863c964123f59bd828c 154 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 8 154 4.2E-59 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VAB027_3722 a268cff73b24e863c964123f59bd828c 154 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 136 13.324 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VAB027_3722 a268cff73b24e863c964123f59bd828c 154 Gene3D G3DSA:1.20.5.620 60 120 4.0E-23 T 14-10-2018 VAB027_3722 a268cff73b24e863c964123f59bd828c 154 Pfam PF00430 ATP synthase B/B' CF(0) 4 135 3.5E-36 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VAB027_3722 a268cff73b24e863c964123f59bd828c 154 SUPERFAMILY SSF81573 61 119 8.63E-15 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VAB027_3249 b96a0de8f8396e105e5909e2a17bedf1 244 Gene3D G3DSA:2.40.50.580 1 80 2.3E-32 T 14-10-2018 VAB027_3249 b96a0de8f8396e105e5909e2a17bedf1 244 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 239 56.826 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VAB027_3249 b96a0de8f8396e105e5909e2a17bedf1 244 Pfam PF03749 Sugar fermentation stimulation protein 13 230 6.0E-76 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VAB027_3249 b96a0de8f8396e105e5909e2a17bedf1 244 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 229 1.6E-77 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VAB027_3249 b96a0de8f8396e105e5909e2a17bedf1 244 Gene3D G3DSA:3.40.1350.60 81 238 1.7E-53 T 14-10-2018 VAB027_82 c5af60aef59ce42e891f592d222f9a89 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 128 6.0E-5 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VAB027_82 c5af60aef59ce42e891f592d222f9a89 270 Gene3D G3DSA:3.40.50.150 5 234 8.3E-20 T 14-10-2018 VAB027_82 c5af60aef59ce42e891f592d222f9a89 270 PIRSF PIRSF028177 3 270 2.5E-93 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VAB027_82 c5af60aef59ce42e891f592d222f9a89 270 SUPERFAMILY SSF53335 18 252 1.16E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 Gene3D G3DSA:3.40.50.300 505 680 1.2E-28 T 14-10-2018 VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 1.0E-49 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 Gene3D G3DSA:1.10.10.160 301 416 3.9E-52 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 Gene3D G3DSA:3.40.50.300 200 497 3.9E-52 T 14-10-2018 VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 Pfam PF13361 UvrD-like helicase C-terminal domain 594 666 6.0E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 Pfam PF00580 UvrD/REP helicase N-terminal domain 200 496 3.5E-43 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAB027_463 e0a30298fdba45d74586e77585e63fdd 687 SUPERFAMILY SSF52540 198 679 3.36E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 Pfam PF00994 Probable molybdopterin binding domain 5 170 1.2E-28 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 SMART SM00852 5 172 2.3E-33 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 1.4E-25 T 14-10-2018 IPR001453 MoaB/Mog domain VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 108.585 T 14-10-2018 IPR008135 Competence-induced protein CinA VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 SUPERFAMILY SSF53218 2 204 1.96E-35 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 PIRSF PIRSF006728 1 392 3.9E-122 T 14-10-2018 IPR008135 Competence-induced protein CinA VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 Gene3D G3DSA:3.40.980.10 1 172 8.5E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 SUPERFAMILY SSF142433 253 386 3.53E-5 T 14-10-2018 IPR036653 CinA-like, C-terminal VAB027_1928 9515e8fcafbab5ac9a4a98ac5c927296 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 396 3.3E-88 T 14-10-2018 IPR008135 Competence-induced protein CinA VAB027_3438 854ec22d545758162a66bafca9d7a36a 490 Pfam PF15864 Protein glycosylation ligase 174 199 1.6E-11 T 14-10-2018 IPR031726 Protein glycosylation ligase domain VAB027_3438 854ec22d545758162a66bafca9d7a36a 490 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 490 8.5E-29 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VAB027_3438 854ec22d545758162a66bafca9d7a36a 490 Pfam PF04932 O-Antigen ligase 221 366 3.9E-14 T 14-10-2018 IPR007016 O-antigen ligase-related VAB027_3438 854ec22d545758162a66bafca9d7a36a 490 ProSitePatterns PS00284 Serpins signature. 18 28 - T 14-10-2018 IPR023795 Serpin, conserved site VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Gene3D G3DSA:3.40.309.10 217 400 6.1E-169 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Gene3D G3DSA:1.20.1090.10 643 864 3.2E-60 T 14-10-2018 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 SUPERFAMILY SSF53720 6 454 3.53E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 SUPERFAMILY SSF56796 452 863 6.28E-115 T 14-10-2018 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Gene3D G3DSA:3.40.605.10 15 216 6.1E-169 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 850 3.2E-113 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Gene3D G3DSA:3.40.605.10 401 455 1.7E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Pfam PF00171 Aldehyde dehydrogenase family 5 402 4.7E-25 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VAB027_2670 6da03c9008d6a783c2c3029dc4e6827d 894 Gene3D G3DSA:3.40.50.1970 456 642 2.9E-58 T 14-10-2018 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 5.8E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 3.3E-68 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.756 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 Gene3D G3DSA:3.40.50.1470 1 196 1.5E-76 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 SUPERFAMILY SSF53178 5 194 1.11E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VAB027_2810 dca53cd2289939e02937410b6a91e1a2 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VAB027_1628 b69c1e5611297e0d29a0c8623eaecc98 737 Gene3D G3DSA:3.40.50.300 462 732 9.9E-70 T 14-10-2018 VAB027_1628 b69c1e5611297e0d29a0c8623eaecc98 737 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 520 723 1.1E-45 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VAB027_1628 b69c1e5611297e0d29a0c8623eaecc98 737 Pfam PF02706 Chain length determinant protein 12 101 1.2E-10 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VAB027_1628 b69c1e5611297e0d29a0c8623eaecc98 737 SUPERFAMILY SSF52540 538 723 3.68E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1628 b69c1e5611297e0d29a0c8623eaecc98 737 Pfam PF13614 AAA domain 548 684 3.0E-12 T 14-10-2018 IPR025669 AAA domain VAB027_1628 b69c1e5611297e0d29a0c8623eaecc98 737 Pfam PF13807 G-rich domain on putative tyrosine kinase 397 468 3.8E-10 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VAB027_1506 19742317e85353b43682a2fbc08b43ee 175 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 44.951 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VAB027_1506 19742317e85353b43682a2fbc08b43ee 175 SUPERFAMILY SSF53927 6 159 6.02E-57 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_1506 19742317e85353b43682a2fbc08b43ee 175 Gene3D G3DSA:3.40.140.10 4 169 2.0E-64 T 14-10-2018 VAB027_1506 19742317e85353b43682a2fbc08b43ee 175 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAB027_1506 19742317e85353b43682a2fbc08b43ee 175 Pfam PF14437 MafB19-like deaminase 9 155 1.5E-32 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VAB027_574 8aba74ce3bb749509bdc61e90a8275ba 351 SUPERFAMILY SSF161098 142 329 1.19E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_574 8aba74ce3bb749509bdc61e90a8275ba 351 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 58 3.4E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAB027_574 8aba74ce3bb749509bdc61e90a8275ba 351 Gene3D G3DSA:1.10.3720.10 135 349 1.1E-17 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_574 8aba74ce3bb749509bdc61e90a8275ba 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 165 346 5.5E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1351 ceeaa96e63b30312624ad3bffa00a476 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.5E-44 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VAB027_1351 ceeaa96e63b30312624ad3bffa00a476 242 SUPERFAMILY SSF69593 7 237 4.58E-59 T 14-10-2018 VAB027_1351 ceeaa96e63b30312624ad3bffa00a476 242 Pfam PF01553 Acyltransferase 60 180 4.1E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_1351 ceeaa96e63b30312624ad3bffa00a476 242 SMART SM00563 67 182 1.9E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_3421 03704a179a7e9683c809de110b7b2d49 159 SUPERFAMILY SSF54523 7 99 1.41E-13 T 14-10-2018 VAB027_3421 03704a179a7e9683c809de110b7b2d49 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.1E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3421 03704a179a7e9683c809de110b7b2d49 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3421 03704a179a7e9683c809de110b7b2d49 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3421 03704a179a7e9683c809de110b7b2d49 159 Gene3D G3DSA:3.30.700.10 7 159 8.1E-15 T 14-10-2018 VAB027_2033 dfc6150c8603100baea2272cfc05bb57 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 8.9E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VAB027_2033 dfc6150c8603100baea2272cfc05bb57 109 Gene3D G3DSA:1.10.10.370 39 109 2.3E-31 T 14-10-2018 VAB027_2033 dfc6150c8603100baea2272cfc05bb57 109 SUPERFAMILY SSF69721 2 109 3.27E-40 T 14-10-2018 IPR025526 DsrC-like domain superfamily VAB027_2033 dfc6150c8603100baea2272cfc05bb57 109 Pfam PF04358 DsrC like protein 4 109 1.1E-43 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VAB027_2033 dfc6150c8603100baea2272cfc05bb57 109 Gene3D G3DSA:3.30.1420.10 1 38 1.2E-11 T 14-10-2018 VAB027_2033 dfc6150c8603100baea2272cfc05bb57 109 PIRSF PIRSF006223 2 109 1.7E-41 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VAB027_1963 14251b31c48977d8fa7801e3ba981b11 721 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 635 45.142 T 14-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 VAB027_1963 14251b31c48977d8fa7801e3ba981b11 721 Pfam PF13632 Glycosyl transferase family group 2 231 420 4.1E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAB027_1963 14251b31c48977d8fa7801e3ba981b11 721 Gene3D G3DSA:3.90.550.10 123 359 1.8E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_1963 14251b31c48977d8fa7801e3ba981b11 721 SUPERFAMILY SSF53448 132 420 3.94E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:2.40.30.20 1 93 1.6E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.6E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.2E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF52540 96 381 3.54E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:1.20.150.20 383 513 2.5E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.766 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF47917 383 511 3.4E-45 T 14-10-2018 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-131 T 14-10-2018 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF50615 10 94 5.69E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.9E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAB027_3720 a27a017758a0ec43686328536a8e8faa 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 4.4E-252 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_2877 dbd6758e82946961e05d37be18265c9f 243 Gene3D G3DSA:3.40.50.150 52 196 1.0E-12 T 14-10-2018 VAB027_2877 dbd6758e82946961e05d37be18265c9f 243 Pfam PF08241 Methyltransferase domain 70 125 1.4E-8 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VAB027_2877 dbd6758e82946961e05d37be18265c9f 243 SUPERFAMILY SSF53335 71 212 1.08E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 PIRSF PIRSF001434 1 384 4.7E-128 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 Gene3D G3DSA:3.40.640.10 3 248 1.3E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 Gene3D G3DSA:3.90.1150.10 249 384 2.1E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 5.1E-133 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 3.0E-210 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VAB027_213 89a62eaf6536ee6cb530b966e245e758 388 SUPERFAMILY SSF53383 9 381 1.1E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1376 1d1a5901c27b04e395f22c845b224c82 240 SUPERFAMILY SSF55469 1 239 6.41E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAB027_1376 1d1a5901c27b04e395f22c845b224c82 240 Gene3D G3DSA:3.40.109.10 1 240 2.7E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAB027_1376 1d1a5901c27b04e395f22c845b224c82 240 Pfam PF00881 Nitroreductase family 8 159 3.3E-19 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VAB027_1376 1d1a5901c27b04e395f22c845b224c82 240 PIRSF PIRSF005426 1 240 5.9E-80 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 SUPERFAMILY SSF158472 160 209 2.22E-5 T 14-10-2018 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 3.8E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 SMART SM00304 159 211 7.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 428 1.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 SMART SM00388 212 277 2.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 SMART SM00387 320 430 5.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 SUPERFAMILY SSF47384 195 277 8.83E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 Gene3D G3DSA:3.30.565.10 282 433 4.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 SUPERFAMILY SSF55874 266 431 1.02E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1995 96f604de7156f6a22b8fc770b74b1763 440 Gene3D G3DSA:1.10.287.130 163 278 3.1E-21 T 14-10-2018 VAB027_830 4dfb555310776eabafcbae6008861dc3 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 329 3.8E-35 T 14-10-2018 IPR000160 GGDEF domain VAB027_830 4dfb555310776eabafcbae6008861dc3 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 332 4.3E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_830 4dfb555310776eabafcbae6008861dc3 356 Gene3D G3DSA:3.30.70.270 178 345 1.7E-44 T 14-10-2018 VAB027_830 4dfb555310776eabafcbae6008861dc3 356 SUPERFAMILY SSF55073 184 332 3.53E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_830 4dfb555310776eabafcbae6008861dc3 356 SMART SM00267 168 333 2.2E-43 T 14-10-2018 IPR000160 GGDEF domain VAB027_3367 3ef5ef56a657d55355c3bf43e9b33795 200 Gene3D G3DSA:3.90.950.10 1 198 2.4E-83 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_3367 3ef5ef56a657d55355c3bf43e9b33795 200 SUPERFAMILY SSF52972 1 195 9.68E-76 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_3367 3ef5ef56a657d55355c3bf43e9b33795 200 Pfam PF01725 Ham1 family 4 192 2.2E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VAB027_3367 3ef5ef56a657d55355c3bf43e9b33795 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.718 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VAB027_3367 3ef5ef56a657d55355c3bf43e9b33795 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.3E-63 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VAB027_171 0815de20e1e83254431c251eaeecad87 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.1E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_171 0815de20e1e83254431c251eaeecad87 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 2.1E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_171 0815de20e1e83254431c251eaeecad87 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 2.1E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_171 0815de20e1e83254431c251eaeecad87 275 Gene3D G3DSA:3.30.540.10 7 162 4.2E-46 T 14-10-2018 VAB027_171 0815de20e1e83254431c251eaeecad87 275 Pfam PF00459 Inositol monophosphatase family 14 253 2.4E-51 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAB027_171 0815de20e1e83254431c251eaeecad87 275 Gene3D G3DSA:3.40.190.80 163 264 4.1E-26 T 14-10-2018 VAB027_171 0815de20e1e83254431c251eaeecad87 275 SUPERFAMILY SSF56655 6 273 1.57E-78 T 14-10-2018 VAB027_171 0815de20e1e83254431c251eaeecad87 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.0E-112 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VAB027_171 0815de20e1e83254431c251eaeecad87 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.221 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VAB027_1810 f6e542d94ffbefcd471134361ff29024 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.2E-10 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VAB027_1810 f6e542d94ffbefcd471134361ff29024 434 SUPERFAMILY SSF53613 31 417 1.14E-44 T 14-10-2018 IPR029056 Ribokinase-like VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 Pfam PF13378 Enolase C-terminal domain-like 130 279 5.6E-12 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 SUPERFAMILY SSF54826 1 99 1.3E-28 T 14-10-2018 VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 SMART SM00922 116 211 1.1E-5 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 22.059 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 5.0E-134 T 14-10-2018 VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 Gene3D G3DSA:3.30.390.10 4 306 6.1E-121 T 14-10-2018 IPR029017 Enolase-like, N-terminal VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 Gene3D G3DSA:3.20.20.120 99 300 6.1E-121 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAB027_2608 73c09978aacb22fdae8d3ff0ae4b8fa3 332 SUPERFAMILY SSF51604 105 317 5.9E-45 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAB027_1479 98e3e16b1c7b1ea0a2cc845acbf4c2e4 657 Gene3D G3DSA:3.40.50.300 2 197 8.8E-10 T 14-10-2018 VAB027_1479 98e3e16b1c7b1ea0a2cc845acbf4c2e4 657 Gene3D G3DSA:3.40.50.300 257 444 7.5E-18 T 14-10-2018 VAB027_1479 98e3e16b1c7b1ea0a2cc845acbf4c2e4 657 SUPERFAMILY SSF52540 6 436 9.46E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1479 98e3e16b1c7b1ea0a2cc845acbf4c2e4 657 Pfam PF05872 Bacterial protein of unknown function (DUF853) 29 74 2.0E-6 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal VAB027_1365 dec5f614436344e426618c6e1326ee2a 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 352 4.4E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VAB027_1365 dec5f614436344e426618c6e1326ee2a 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.8E-131 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 Pfam PF13432 Tetratricopeptide repeat 148 200 1.1E-7 T 14-10-2018 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 Pfam PF13174 Tetratricopeptide repeat 211 243 2.0E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 Gene3D G3DSA:1.25.40.10 136 254 3.0E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 254 16.802 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 SUPERFAMILY SSF48452 138 250 8.22E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 Gene3D G3DSA:1.20.5.110 37 115 1.2E-21 T 14-10-2018 VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 137 253 2.6E-35 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VAB027_2476 c1fee696c9e9f20d1db92c07b26c0651 254 Pfam PF16331 TolA binding protein trimerisation 42 113 3.3E-23 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VAB027_2680 ea0a078a04afe4ef5a45e822b8784f6e 306 SUPERFAMILY SSF52768 3 291 1.2E-77 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VAB027_2680 ea0a078a04afe4ef5a45e822b8784f6e 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.2E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VAB027_2680 ea0a078a04afe4ef5a45e822b8784f6e 306 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 3.2E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VAB027_2680 ea0a078a04afe4ef5a45e822b8784f6e 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.2E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VAB027_2680 ea0a078a04afe4ef5a45e822b8784f6e 306 Gene3D G3DSA:3.40.800.20 2 302 1.1E-59 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VAB027_2680 ea0a078a04afe4ef5a45e822b8784f6e 306 Pfam PF00850 Histone deacetylase domain 25 288 1.3E-46 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 SMART SM00382 43 241 5.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 9.9E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 Gene3D G3DSA:3.40.50.300 9 331 5.7E-79 T 14-10-2018 VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 SUPERFAMILY SSF52540 10 262 1.06E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 Pfam PF00005 ABC transporter 35 192 1.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3232 ba14507a7fe2e2c967f372d49d4dfcd1 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.3E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_2463 8d74ba4209f50026f15d48187742c3ed 451 Pfam PF10117 McrBC 5-methylcytosine restriction system component 65 390 1.1E-92 T 14-10-2018 IPR019292 5-methylcytosine restriction system component VAB027_1631 e6688755fba1c95a98c46b9345b4559f 198 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 8.6E-33 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.7E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Pfam PF08245 Mur ligase middle domain 127 307 5.4E-30 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 SUPERFAMILY SSF53623 108 323 3.92E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Gene3D G3DSA:3.40.1190.10 111 324 3.0E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Gene3D G3DSA:3.90.190.20 325 482 1.4E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 2.8E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 SUPERFAMILY SSF51984 23 109 4.84E-28 T 14-10-2018 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 SUPERFAMILY SSF53244 326 474 6.78E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.3E-191 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.704 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_3027 a43f78f90ca2b681236436ebe5b884bf 486 Gene3D G3DSA:3.40.50.720 23 110 1.4E-33 T 14-10-2018 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 Gene3D G3DSA:3.40.190.10 160 264 1.4E-39 T 14-10-2018 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 Pfam PF03466 LysR substrate binding domain 83 283 5.4E-32 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 Gene3D G3DSA:3.40.190.10 89 285 1.4E-39 T 14-10-2018 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 Gene3D G3DSA:1.10.10.10 1 88 9.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 SUPERFAMILY SSF46785 1 80 3.95E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 8.8E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 8.8E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 8.8E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 5.0E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2233 a25320aa16aa4d54b68c0ca640f56994 287 SUPERFAMILY SSF53850 88 284 8.14E-26 T 14-10-2018 VAB027_2497 d784f1cc94bc747edaf061d68a79c867 310 Gene3D G3DSA:2.40.160.10 20 310 7.1E-37 T 14-10-2018 IPR023614 Porin domain superfamily VAB027_2497 d784f1cc94bc747edaf061d68a79c867 310 SUPERFAMILY SSF56935 30 310 1.2E-39 T 14-10-2018 VAB027_2497 d784f1cc94bc747edaf061d68a79c867 310 Pfam PF13609 Gram-negative porin 7 293 9.0E-26 T 14-10-2018 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 Pfam PF01235 Sodium:alanine symporter family 48 452 2.7E-163 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.1E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.1E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.1E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.1E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.1E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.1E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 9.0E-164 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2986 5972d612e71ed19fb2b6b52ecfba907a 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.398 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Gene3D G3DSA:2.30.33.40 1 96 1.0E-36 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.0E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.0E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.0E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.0E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 14-10-2018 IPR011032 GroES-like superfamily VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.3E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_230 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SMART SM00883 2 95 2.9E-49 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_570 f66b6357d424fc885d821f000a40581a 310 SUPERFAMILY SSF64182 10 307 8.76E-13 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VAB027_570 f66b6357d424fc885d821f000a40581a 310 PIRSF PIRSF028235 1 310 8.7E-214 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 Gene3D G3DSA:2.150.10.10 3823 3965 3.1E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3855 3873 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1091 1233 3.0E-52 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1235 1377 1.0E-52 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 516 657 8.8E-56 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 659 801 3.3E-52 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 371 512 7.5E-47 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1667 1794 7.8E-45 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1523 1665 3.2E-53 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1379 1521 2.7E-56 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 803 945 2.3E-52 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 947 1089 1.5E-52 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3887 3980 4.9E-14 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VAB027_339 c9f753e8bacd91c74b738c3d0a0b1e12 3983 SUPERFAMILY SSF51120 3825 3964 1.57E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAB027_705 653fc000773b59ab13441d000cb411c4 137 Gene3D G3DSA:3.10.180.10 6 135 1.5E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_705 653fc000773b59ab13441d000cb411c4 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 1.1E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_705 653fc000773b59ab13441d000cb411c4 137 SUPERFAMILY SSF54593 9 134 1.88E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF51206 8 137 6.42E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF46785 139 207 2.69E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00100 2 122 1.5E-26 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:1.10.10.10 139 207 1.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:2.60.120.10 10 138 2.3E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 2.7E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VAB027_1256 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAB027_3349 cf7e743cf39772386c770b605a4708b1 298 Pfam PF03466 LysR substrate binding domain 88 292 9.9E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3349 cf7e743cf39772386c770b605a4708b1 298 Gene3D G3DSA:1.10.10.10 2 91 2.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3349 cf7e743cf39772386c770b605a4708b1 298 Gene3D G3DSA:3.40.190.290 92 292 1.5E-33 T 14-10-2018 VAB027_3349 cf7e743cf39772386c770b605a4708b1 298 SUPERFAMILY SSF53850 89 295 7.6E-26 T 14-10-2018 VAB027_3349 cf7e743cf39772386c770b605a4708b1 298 SUPERFAMILY SSF46785 3 88 1.13E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3349 cf7e743cf39772386c770b605a4708b1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3373 e8d61da63a7e8d73af1b7d48496962b4 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 206 2.3E-78 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VAB027_3373 e8d61da63a7e8d73af1b7d48496962b4 375 Pfam PF01464 Transglycosylase SLT domain 211 334 1.5E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VAB027_3373 e8d61da63a7e8d73af1b7d48496962b4 375 Gene3D G3DSA:1.10.530.10 194 370 7.1E-49 T 14-10-2018 VAB027_3373 e8d61da63a7e8d73af1b7d48496962b4 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAB027_3373 e8d61da63a7e8d73af1b7d48496962b4 375 SUPERFAMILY SSF53955 206 370 1.69E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_3442 459189837382f952cb35ceb2e48783fc 444 Pfam PF00999 Sodium/hydrogen exchanger family 23 416 8.0E-57 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAB027_1951 c0daf48cc2c50f19d0b26cccc77d4761 427 PIRSF PIRSF006066 1 426 1.6E-72 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAB027_1951 c0daf48cc2c50f19d0b26cccc77d4761 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 7.2E-106 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAB027_1951 c0daf48cc2c50f19d0b26cccc77d4761 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 6.5E-98 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAB027_1832 9c0add138b0fb8c760618d0cee14eddf 301 Pfam PF03956 Lysine exporter LysO 112 297 1.6E-55 T 14-10-2018 IPR005642 Lysine exporter LysO VAB027_1832 9c0add138b0fb8c760618d0cee14eddf 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 151 299 1.0E-78 T 14-10-2018 IPR005642 Lysine exporter LysO VAB027_1916 4759a50f5408b47b680cc13f2694395d 341 Pfam PF02277 Phosphoribosyltransferase 2 339 8.5E-126 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAB027_1916 4759a50f5408b47b680cc13f2694395d 341 Gene3D G3DSA:3.40.50.10210 51 322 3.0E-123 T 14-10-2018 VAB027_1916 4759a50f5408b47b680cc13f2694395d 341 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 339 7.4E-136 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAB027_1916 4759a50f5408b47b680cc13f2694395d 341 SUPERFAMILY SSF52733 2 340 4.84E-112 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAB027_1916 4759a50f5408b47b680cc13f2694395d 341 Gene3D G3DSA:1.10.1610.10 13 339 3.0E-123 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAB027_1916 4759a50f5408b47b680cc13f2694395d 341 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 341 36.891 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.6E-65 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 Gene3D G3DSA:3.40.47.10 261 414 1.6E-54 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 SMART SM00825 Beta-ketoacyl synthase 6 414 9.8E-17 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 3.6E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 Gene3D G3DSA:3.40.47.10 1 255 8.1E-94 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 SUPERFAMILY SSF53901 215 413 1.57E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 2.0E-193 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 PIRSF PIRSF000447 1 414 4.9E-207 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VAB027_2656 e693967cc13f01e0298ae0e3c3c9835a 414 SUPERFAMILY SSF53901 3 252 7.13E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.40.630.40 155 396 2.4E-69 T 14-10-2018 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF11741 AMIN domain 31 132 2.9E-17 T 14-10-2018 IPR021731 AMIN domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF54106 473 517 9.16E-9 T 14-10-2018 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00257 408 451 2.6E-14 T 14-10-2018 IPR018392 LysM domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00257 527 570 4.3E-14 T 14-10-2018 IPR018392 LysM domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00257 474 517 1.3E-12 T 14-10-2018 IPR018392 LysM domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 168 387 3.6E-49 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:2.60.40.3500 22 135 3.2E-25 T 14-10-2018 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF54106 408 451 2.49E-10 T 14-10-2018 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF53187 166 390 5.02E-52 T 14-10-2018 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF54106 527 570 1.96E-10 T 14-10-2018 VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01476 LysM domain 475 517 1.2E-9 T 14-10-2018 IPR018392 LysM domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01476 LysM domain 528 570 1.0E-12 T 14-10-2018 IPR018392 LysM domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01476 LysM domain 409 451 9.7E-12 T 14-10-2018 IPR018392 LysM domain VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.10.350.10 404 456 8.1E-16 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.10.350.10 526 572 1.8E-15 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.10.350.10 463 524 1.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_3488 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00646 228 387 2.9E-68 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 Gene3D G3DSA:3.40.50.620 9 177 3.8E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 SUPERFAMILY SSF52402 7 170 3.31E-47 T 14-10-2018 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 Pfam PF00764 Arginosuccinate synthase 10 396 3.0E-143 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 2.0E-133 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 SUPERFAMILY SSF69864 177 402 1.16E-84 T 14-10-2018 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 Gene3D G3DSA:3.90.1260.10 68 354 3.8E-144 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 Gene3D G3DSA:1.20.5.470 368 403 7.6E-7 T 14-10-2018 VAB027_249 bb7a06521baa7b80ac65db4a843a6cea 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.999 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_350 3f64de073199e88603a7d72662944c35 190 SMART SM01266 4 56 2.0E-10 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VAB027_350 3f64de073199e88603a7d72662944c35 190 Gene3D G3DSA:2.160.10.10 1 190 3.9E-69 T 14-10-2018 VAB027_350 3f64de073199e88603a7d72662944c35 190 Pfam PF12464 Maltose acetyltransferase 6 55 6.8E-8 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VAB027_350 3f64de073199e88603a7d72662944c35 190 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_350 3f64de073199e88603a7d72662944c35 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 161 2.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_350 3f64de073199e88603a7d72662944c35 190 SUPERFAMILY SSF51161 3 183 8.46E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_1715 2b77e6d3121810a0506ba60e4e0ef0fb 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_1715 2b77e6d3121810a0506ba60e4e0ef0fb 253 Gene3D G3DSA:3.40.50.1580 1 253 5.8E-82 T 14-10-2018 VAB027_1715 2b77e6d3121810a0506ba60e4e0ef0fb 253 SUPERFAMILY SSF53167 6 249 2.88E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAB027_1715 2b77e6d3121810a0506ba60e4e0ef0fb 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 2.1E-111 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VAB027_1715 2b77e6d3121810a0506ba60e4e0ef0fb 253 Pfam PF01048 Phosphorylase superfamily 20 251 1.9E-39 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAB027_1474 85c4ef3f193e2142f81f4cf5e7e28364 143 Gene3D G3DSA:3.30.420.10 10 143 6.9E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1474 85c4ef3f193e2142f81f4cf5e7e28364 143 Pfam PF00075 RNase H 18 118 8.0E-15 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VAB027_1474 85c4ef3f193e2142f81f4cf5e7e28364 143 SUPERFAMILY SSF53098 12 141 1.26E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_621 6684550f853a4de9bce6f6fbc306f5cd 189 SMART SM00867 24 187 9.7E-67 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VAB027_621 6684550f853a4de9bce6f6fbc306f5cd 189 SUPERFAMILY SSF101874 23 188 3.14E-49 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VAB027_621 6684550f853a4de9bce6f6fbc306f5cd 189 Pfam PF04264 YceI-like domain 25 184 3.5E-37 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VAB027_621 6684550f853a4de9bce6f6fbc306f5cd 189 Gene3D G3DSA:2.40.128.110 23 189 1.2E-50 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VAB027_621 6684550f853a4de9bce6f6fbc306f5cd 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 43.42 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI VAB027_1625 bb6be6b463f6084db9764f56e57851a7 464 SUPERFAMILY SSF51735 142 267 5.12E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1625 bb6be6b463f6084db9764f56e57851a7 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 464 2.3E-153 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VAB027_1625 bb6be6b463f6084db9764f56e57851a7 464 Gene3D G3DSA:3.40.50.720 141 262 8.8E-17 T 14-10-2018 VAB027_1625 bb6be6b463f6084db9764f56e57851a7 464 Pfam PF13727 CoA-binding domain 62 238 3.0E-48 T 14-10-2018 VAB027_1625 bb6be6b463f6084db9764f56e57851a7 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 4.9E-176 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VAB027_1625 bb6be6b463f6084db9764f56e57851a7 464 Pfam PF02397 Bacterial sugar transferase 274 456 4.1E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase VAB027_3321 50bd69bcacefce0964e9b3973c738b34 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 101 108 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAB027_3321 50bd69bcacefce0964e9b3973c738b34 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 225 8.5E-73 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAB027_3321 50bd69bcacefce0964e9b3973c738b34 232 Gene3D G3DSA:3.90.550.10 1 231 2.9E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3321 50bd69bcacefce0964e9b3973c738b34 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 225 43.135 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAB027_3321 50bd69bcacefce0964e9b3973c738b34 232 SUPERFAMILY SSF53448 4 226 2.29E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3321 50bd69bcacefce0964e9b3973c738b34 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 226 9.2E-78 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.9E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 Gene3D G3DSA:3.30.70.2120 174 275 3.6E-77 T 14-10-2018 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 Gene3D G3DSA:1.10.8.410 328 376 1.1E-19 T 14-10-2018 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 PRINTS PR00207 Flagellin signature 37 54 1.1E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 PRINTS PR00207 Flagellin signature 76 95 1.1E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 PRINTS PR00207 Flagellin signature 111 134 1.1E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.6E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.2E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 SUPERFAMILY SSF64518 1 376 1.2E-97 T 14-10-2018 VAB027_2830 e59e1e88f68f70ed90b8daf06bd864bc 377 Gene3D G3DSA:1.20.1330.10 44 327 3.6E-77 T 14-10-2018 VAB027_222 8e53ae99ad0524cfd427cc25e5ca93ab 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 3.8E-98 T 14-10-2018 VAB027_222 8e53ae99ad0524cfd427cc25e5ca93ab 305 Pfam PF01040 UbiA prenyltransferase family 20 269 2.4E-36 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VAB027_222 8e53ae99ad0524cfd427cc25e5ca93ab 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.621 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VAB027_222 8e53ae99ad0524cfd427cc25e5ca93ab 305 PIRSF PIRSF005355 1 303 5.6E-83 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.2E-126 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 Pfam PF00005 ABC transporter 20 166 7.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 3.6E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 Gene3D G3DSA:3.40.50.300 2 241 1.2E-70 T 14-10-2018 VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 SUPERFAMILY SSF52540 3 237 4.76E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1338 81de4e06175ea386a3234e0166ab6491 241 SMART SM00382 28 202 3.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 Gene3D G3DSA:2.170.130.10 28 155 1.4E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 SUPERFAMILY SSF56935 21 713 1.86E-106 T 14-10-2018 VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 Pfam PF00593 TonB dependent receptor 209 711 4.8E-51 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 3.8E-172 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 4.7E-192 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 Gene3D G3DSA:2.40.170.20 166 713 4.6E-79 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_961 3d893a664ad3d6c78764e67583f4e6bb 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 6.5E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_3669 0e723b60249b0004a063f671c5ade4d6 261 Pfam PF00005 ABC transporter 22 166 2.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3669 0e723b60249b0004a063f671c5ade4d6 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3669 0e723b60249b0004a063f671c5ade4d6 261 SUPERFAMILY SSF52540 4 232 1.11E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3669 0e723b60249b0004a063f671c5ade4d6 261 Gene3D G3DSA:3.40.50.300 1 254 6.8E-61 T 14-10-2018 VAB027_3669 0e723b60249b0004a063f671c5ade4d6 261 SMART SM00382 26 214 6.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 5.2E-62 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 SUPERFAMILY SSF54292 4 107 1.28E-33 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 3.5E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 Gene3D G3DSA:3.10.20.30 1 112 2.2E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAB027_1409 f2b68c475f8e7119da7374507ce36953 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 SUPERFAMILY SSF54534 90 241 1.79E-36 T 14-10-2018 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 SUPERFAMILY SSF109998 248 430 5.36E-49 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Gene3D G3DSA:3.30.70.1050 1 115 7.9E-42 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-43 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.9E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.3E-143 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.757 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Gene3D G3DSA:3.10.50.40 150 246 3.2E-106 T 14-10-2018 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 SUPERFAMILY SSF102735 1 130 6.54E-42 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Gene3D G3DSA:1.10.3120.10 116 417 3.2E-106 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.7E-39 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VAB027_2567 7fee7f7075566fb830964c16b7c10044 433 PIRSF PIRSF003095 1 432 2.4E-128 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VAB027_1733 5544980da05f69ca191908fdc2fe0103 132 Pfam PF04304 Protein of unknown function (DUF454) 7 121 7.8E-38 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VAB027_1733 5544980da05f69ca191908fdc2fe0103 132 PIRSF PIRSF016789 6 127 1.1E-49 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VAB027_2592 102be7587ad05aee057979db77be6892 846 Gene3D G3DSA:2.10.10.20 24 78 4.7E-11 T 14-10-2018 VAB027_2592 102be7587ad05aee057979db77be6892 846 Gene3D G3DSA:2.60.40.10 177 268 3.5E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2592 102be7587ad05aee057979db77be6892 846 Gene3D G3DSA:2.60.40.10 84 173 2.5E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2592 102be7587ad05aee057979db77be6892 846 SUPERFAMILY SSF51445 520 832 1.78E-48 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_2592 102be7587ad05aee057979db77be6892 846 ProSitePatterns PS01095 Chitinases family 18 active site. 636 644 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAB027_2592 102be7587ad05aee057979db77be6892 846 Pfam PF00704 Glycosyl hydrolases family 18 523 824 1.2E-26 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAB027_2592 102be7587ad05aee057979db77be6892 846 Gene3D G3DSA:2.60.40.10 428 520 5.0E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2592 102be7587ad05aee057979db77be6892 846 Gene3D G3DSA:2.60.40.10 337 426 1.7E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_2592 102be7587ad05aee057979db77be6892 846 SUPERFAMILY SSF51055 19 78 6.28E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_2592 102be7587ad05aee057979db77be6892 846 SMART SM00636 522 824 9.8E-5 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VAB027_2592 102be7587ad05aee057979db77be6892 846 Gene3D G3DSA:3.20.20.80 521 841 3.3E-78 T 14-10-2018 VAB027_2592 102be7587ad05aee057979db77be6892 846 SMART SM00495 276 325 8.1E-9 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_2592 102be7587ad05aee057979db77be6892 846 SMART SM00495 28 74 2.6E-13 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAB027_816 bd70823132453c1b4d17855783e3c0a9 254 SMART SM00382 26 213 5.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_816 bd70823132453c1b4d17855783e3c0a9 254 SUPERFAMILY SSF52540 2 226 1.08E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_816 bd70823132453c1b4d17855783e3c0a9 254 Gene3D G3DSA:3.40.50.300 1 251 4.3E-63 T 14-10-2018 VAB027_816 bd70823132453c1b4d17855783e3c0a9 254 Pfam PF00005 ABC transporter 18 164 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_816 bd70823132453c1b4d17855783e3c0a9 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2601 2d765bf4197de163d62c1fd92bbfb720 107 Gene3D G3DSA:1.10.3340.10 5 107 2.9E-44 T 14-10-2018 IPR036810 SMc04008-like superfamily VAB027_2601 2d765bf4197de163d62c1fd92bbfb720 107 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 1.6E-35 T 14-10-2018 IPR023163 SMc04008-like domain VAB027_2601 2d765bf4197de163d62c1fd92bbfb720 107 SUPERFAMILY SSF158757 8 85 3.53E-35 T 14-10-2018 IPR036810 SMc04008-like superfamily VAB027_841 821f0542ed71961b0c7efee708a83649 742 SUPERFAMILY SSF52540 101 238 1.58E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_841 821f0542ed71961b0c7efee708a83649 742 Pfam PF00270 DEAD/DEAH box helicase 118 255 8.6E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_841 821f0542ed71961b0c7efee708a83649 742 Pfam PF00271 Helicase conserved C-terminal domain 316 457 6.0E-8 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_841 821f0542ed71961b0c7efee708a83649 742 SMART SM00490 366 454 1.1E-8 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_841 821f0542ed71961b0c7efee708a83649 742 SUPERFAMILY SSF52540 308 458 4.84E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_841 821f0542ed71961b0c7efee708a83649 742 Gene3D G3DSA:3.40.50.300 292 462 8.2E-28 T 14-10-2018 VAB027_841 821f0542ed71961b0c7efee708a83649 742 Gene3D G3DSA:3.40.50.300 106 258 2.4E-13 T 14-10-2018 VAB027_841 821f0542ed71961b0c7efee708a83649 742 SMART SM00487 113 281 0.0049 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_3211 5c4b6a4b4ef715b898ca2f40a963a7f2 278 Pfam PF00809 Pterin binding enzyme 19 259 1.0E-90 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3211 5c4b6a4b4ef715b898ca2f40a963a7f2 278 Gene3D G3DSA:3.20.20.20 3 277 1.1E-113 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3211 5c4b6a4b4ef715b898ca2f40a963a7f2 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3211 5c4b6a4b4ef715b898ca2f40a963a7f2 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 273 1.5E-106 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VAB027_3211 5c4b6a4b4ef715b898ca2f40a963a7f2 278 SUPERFAMILY SSF51717 10 276 1.7E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_3211 5c4b6a4b4ef715b898ca2f40a963a7f2 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_618 9c8f1b99eb4d6a2da32bdbb12e2ea276 165 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 3.0E-39 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 VAB027_2521 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.867 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 VAB027_2521 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 SUPERFAMILY SSF158997 1 54 1.83E-20 T 14-10-2018 VAB027_2521 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Gene3D G3DSA:2.20.25.10 8 59 4.1E-24 T 14-10-2018 VAB027_2521 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Pfam PF03966 Trm112p-like protein 2 41 3.3E-11 T 14-10-2018 IPR005651 Trm112-like VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 SMART SM00471 584 893 0.0019 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Gene3D G3DSA:1.10.3210.10 802 934 3.4E-29 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Gene3D G3DSA:1.10.3210.10 562 710 5.2E-21 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 SUPERFAMILY SSF55781 422 568 9.42E-9 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Pfam PF02743 Cache domain 42 315 9.8E-16 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Gene3D G3DSA:3.30.450.20 219 341 3.2E-5 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 SUPERFAMILY SSF109604 807 922 1.51E-9 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Gene3D G3DSA:3.30.450.40 400 560 7.3E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 SUPERFAMILY SSF109604 579 661 6.6E-8 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Gene3D G3DSA:3.30.450.20 137 218 8.4E-10 T 14-10-2018 VAB027_1220 73b158a0317b760ab78fea5eebacd183 962 Pfam PF13487 HD domain 810 875 1.1E-22 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 Gene3D G3DSA:1.10.40.30 363 433 7.6E-147 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 Gene3D G3DSA:1.10.275.10 1 107 2.8E-36 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.217 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.6E-67 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.6E-67 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.6E-67 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.6E-67 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.6E-67 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.6E-67 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 7.3E-202 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 4.2E-28 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 4.2E-28 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 4.2E-28 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-28 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 SUPERFAMILY SSF48557 3 455 2.04E-140 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 Gene3D G3DSA:1.20.200.10 108 446 7.6E-147 T 14-10-2018 VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 Pfam PF00206 Lyase 6 301 1.0E-91 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VAB027_250 0cd0e858b3c3a4c38364d9fd579929c8 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.5E-25 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 SMART SM00283 508 769 4.6E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 SUPERFAMILY SSF58104 461 768 1.11E-74 T 14-10-2018 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 Gene3D G3DSA:3.30.450.20 252 419 1.1E-6 T 14-10-2018 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 Gene3D G3DSA:1.10.287.950 440 769 4.5E-72 T 14-10-2018 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 578 736 3.7E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 Pfam PF00672 HAMP domain 442 490 1.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1074 ad1446dd394edd983d6821a751ede9e8 770 SMART SM00304 440 493 1.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Gene3D G3DSA:3.40.50.620 30 247 3.3E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Gene3D G3DSA:2.40.240.10 340 547 9.7E-80 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Gene3D G3DSA:2.40.240.10 348 466 9.7E-80 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.2E-61 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.1E-294 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 5.9E-127 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 SUPERFAMILY SSF50715 340 549 1.83E-78 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.484 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Gene3D G3DSA:1.10.1160.10 261 339 3.0E-37 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 Gene3D G3DSA:3.90.800.10 101 209 3.3E-107 T 14-10-2018 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAB027_1682 b69a40fe5fa71aa9b3159bf61374e2f2 556 SUPERFAMILY SSF52374 11 337 4.22E-105 T 14-10-2018 VAB027_2887 e32279fb188e4b102e2e0234a9a3cd18 206 Gene3D G3DSA:3.30.420.10 11 205 3.0E-77 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_2887 e32279fb188e4b102e2e0234a9a3cd18 206 SUPERFAMILY SSF53098 15 204 1.97E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2887 e32279fb188e4b102e2e0234a9a3cd18 206 Pfam PF01351 Ribonuclease HII 22 196 7.9E-39 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain VAB027_2887 e32279fb188e4b102e2e0234a9a3cd18 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 38.023 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 VAB027_2727 0419fff70ad51b913328021604811de3 130 SUPERFAMILY SSF81343 8 130 1.96E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2727 0419fff70ad51b913328021604811de3 130 PIRSF PIRSF000178 2 130 2.6E-32 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2727 0419fff70ad51b913328021604811de3 130 Gene3D G3DSA:1.20.1300.10 5 130 2.1E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2727 0419fff70ad51b913328021604811de3 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2727 0419fff70ad51b913328021604811de3 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.0E-29 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2727 0419fff70ad51b913328021604811de3 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2727 0419fff70ad51b913328021604811de3 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 4.7E-40 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_731 94c456a54de604bb4bc5e24d0a6d7dae 92 PIRSF PIRSF003108 1 88 2.1E-16 T 14-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 VAB027_731 94c456a54de604bb4bc5e24d0a6d7dae 92 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 4.3E-27 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ VAB027_731 94c456a54de604bb4bc5e24d0a6d7dae 92 Gene3D G3DSA:1.10.1220.10 4 84 9.5E-7 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAB027_731 94c456a54de604bb4bc5e24d0a6d7dae 92 Pfam PF04221 RelB antitoxin 3 84 2.7E-33 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 Gene3D G3DSA:3.90.700.10 248 358 8.0E-155 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 Pfam PF00890 FAD binding domain 10 392 4.3E-104 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 SUPERFAMILY SSF46977 426 525 3.27E-31 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 PIRSF PIRSF000171 335 532 4.3E-11 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 PIRSF PIRSF000171 1 271 3.9E-27 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 2.7E-7 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.7E-7 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 Gene3D G3DSA:3.50.50.60 10 403 8.0E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 Gene3D G3DSA:1.20.58.100 425 535 4.0E-43 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 6.7E-213 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 SUPERFAMILY SSF51905 4 447 1.04E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.1E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 8.9E-9 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 8.9E-9 T 14-10-2018 VAB027_3094 3b7ec8cdeeecd50fb8b3a27404c419b9 535 SUPERFAMILY SSF56425 238 353 5.38E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_3233 db335327c4d0343c8cfb7355df744cdb 574 Pfam PF00759 Glycosyl hydrolase family 9 100 503 6.3E-22 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VAB027_3233 db335327c4d0343c8cfb7355df744cdb 574 SUPERFAMILY SSF81296 2 91 7.7E-17 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_3233 db335327c4d0343c8cfb7355df744cdb 574 Gene3D G3DSA:2.60.40.10 1 93 1.3E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_3233 db335327c4d0343c8cfb7355df744cdb 574 Gene3D G3DSA:1.50.10.10 94 574 5.8E-226 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VAB027_3233 db335327c4d0343c8cfb7355df744cdb 574 SUPERFAMILY SSF48208 78 564 4.95E-93 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAB027_3233 db335327c4d0343c8cfb7355df744cdb 574 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 8.8E-12 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VAB027_579 571884085cd271a8471575f630e30b88 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 193 2.2E-14 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAB027_579 571884085cd271a8471575f630e30b88 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 77 1.3E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAB027_579 571884085cd271a8471575f630e30b88 222 SUPERFAMILY SSF52833 4 81 6.73E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_579 571884085cd271a8471575f630e30b88 222 Gene3D G3DSA:3.40.30.10 2 202 1.1E-85 T 14-10-2018 VAB027_579 571884085cd271a8471575f630e30b88 222 SUPERFAMILY SSF47616 74 201 3.62E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAB027_579 571884085cd271a8471575f630e30b88 222 Gene3D G3DSA:1.20.1050.10 84 192 1.1E-85 T 14-10-2018 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 SUPERFAMILY SSF53613 1 302 1.71E-87 T 14-10-2018 IPR029056 Ribokinase-like VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 Gene3D G3DSA:3.40.1190.20 1 306 4.0E-107 T 14-10-2018 IPR029056 Ribokinase-like VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 PRINTS PR00990 Ribokinase signature 173 188 3.2E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 PRINTS PR00990 Ribokinase signature 217 228 3.2E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 PRINTS PR00990 Ribokinase signature 33 52 3.2E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 PRINTS PR00990 Ribokinase signature 6 27 3.2E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 PRINTS PR00990 Ribokinase signature 105 118 3.2E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 1.0E-74 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.496 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VAB027_900 9926521795af92b7b43a2f53f23c2ee0 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 6.5E-111 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 Pfam PF00771 FHIPEP family 422 615 4.4E-11 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 Pfam PF00771 FHIPEP family 26 330 2.9E-109 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 229 243 1.1E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 30 43 1.1E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 148 166 1.1E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 178 195 1.1E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 67 86 1.1E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_2416 65a2f0920be0f19a0002f70b6a945792 627 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 129 145 1.1E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAB027_3604 38d92d11fa283c21dc51c36da4e23ae3 381 SUPERFAMILY SSF53383 18 378 1.3E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_3604 38d92d11fa283c21dc51c36da4e23ae3 381 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 1.4E-164 T 14-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VAB027_3604 38d92d11fa283c21dc51c36da4e23ae3 381 Gene3D G3DSA:3.90.1150.10 278 379 2.7E-16 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_3604 38d92d11fa283c21dc51c36da4e23ae3 381 PIRSF PIRSF000390 15 379 2.1E-84 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAB027_3604 38d92d11fa283c21dc51c36da4e23ae3 381 Gene3D G3DSA:3.40.640.10 4 275 4.4E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_3604 38d92d11fa283c21dc51c36da4e23ae3 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 1.1E-79 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAB027_1238 db62785d568a58cdf43e217bb2c507b5 407 Pfam PF12167 Arm DNA-binding domain 11 74 3.8E-22 T 14-10-2018 IPR022000 Min27-like integrase, DNA-binding domain VAB027_1238 db62785d568a58cdf43e217bb2c507b5 407 Gene3D G3DSA:1.10.443.10 183 389 3.7E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_1238 db62785d568a58cdf43e217bb2c507b5 407 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 98 165 5.6E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAB027_1238 db62785d568a58cdf43e217bb2c507b5 407 Gene3D G3DSA:1.10.150.130 83 182 1.8E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_1238 db62785d568a58cdf43e217bb2c507b5 407 SUPERFAMILY SSF56349 87 392 2.33E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_1238 db62785d568a58cdf43e217bb2c507b5 407 Pfam PF00589 Phage integrase family 194 382 7.1E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_3149 03890373c954990518503091a977f650 648 SUPERFAMILY SSF48435 33 481 1.83E-125 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VAB027_3149 03890373c954990518503091a977f650 648 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 505 533 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAB027_3149 03890373c954990518503091a977f650 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 475 4.6E-22 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VAB027_3149 03890373c954990518503091a977f650 648 Pfam PF01464 Transglycosylase SLT domain 492 599 1.9E-30 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VAB027_3149 03890373c954990518503091a977f650 648 Gene3D G3DSA:1.10.530.10 477 648 9.2E-51 T 14-10-2018 VAB027_3149 03890373c954990518503091a977f650 648 SUPERFAMILY SSF53955 485 642 1.99E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_3149 03890373c954990518503091a977f650 648 Gene3D G3DSA:1.25.20.10 33 393 4.3E-102 T 14-10-2018 VAB027_3149 03890373c954990518503091a977f650 648 Gene3D G3DSA:1.10.1240.20 408 475 1.1E-20 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 376 1.4E-165 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PRINTS PR00143 Citrate synthase signature 329 343 8.6E-37 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PRINTS PR00143 Citrate synthase signature 199 227 8.6E-37 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PRINTS PR00143 Citrate synthase signature 177 192 8.6E-37 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PRINTS PR00143 Citrate synthase signature 126 139 8.6E-37 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PRINTS PR00143 Citrate synthase signature 252 272 8.6E-37 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PRINTS PR00143 Citrate synthase signature 309 325 8.6E-37 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 Gene3D G3DSA:1.10.230.10 225 323 7.0E-117 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 SUPERFAMILY SSF48256 10 376 2.22E-123 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 PIRSF PIRSF001369 4 377 1.6E-114 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 ProSitePatterns PS00480 Citrate synthase signature. 259 271 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 Pfam PF00285 Citrate synthase, C-terminal domain 11 358 2.8E-114 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2015 a2d312e7de0af99272d6bb9dac10d4e9 377 Gene3D G3DSA:1.10.580.10 32 356 7.0E-117 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAB027_765 932209e664fa77a8e51283241c4885a7 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 4.7E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_765 932209e664fa77a8e51283241c4885a7 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 87 8.4E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_765 932209e664fa77a8e51283241c4885a7 100 Gene3D G3DSA:3.30.2310.20 1 96 3.0E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_765 932209e664fa77a8e51283241c4885a7 100 SUPERFAMILY SSF143011 1 90 7.06E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_499 a15f7d7fa60e8b8249faf25ae62ed059 431 Gene3D G3DSA:1.20.1250.20 13 213 3.3E-21 T 14-10-2018 VAB027_499 a15f7d7fa60e8b8249faf25ae62ed059 431 Pfam PF07690 Major Facilitator Superfamily 22 367 4.7E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_499 a15f7d7fa60e8b8249faf25ae62ed059 431 Gene3D G3DSA:1.20.1250.20 218 414 1.1E-20 T 14-10-2018 VAB027_499 a15f7d7fa60e8b8249faf25ae62ed059 431 SUPERFAMILY SSF103473 11 414 1.23E-52 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 SMART SM00962 100 296 4.3E-117 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.5E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 6.1E-75 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Gene3D G3DSA:3.40.50.300 90 285 2.6E-123 T 14-10-2018 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Pfam PF02978 Signal peptide binding domain 329 427 4.4E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 SUPERFAMILY SSF47446 329 430 1.8E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Gene3D G3DSA:1.20.120.140 4 305 2.6E-123 T 14-10-2018 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Gene3D G3DSA:1.10.260.30 328 451 6.6E-46 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 SMART SM00963 1 86 3.9E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.193 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 SMART SM00382 99 301 4.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.7E-180 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VAB027_3282 4ce0c78c76f84c383f3e0ec108ac5d53 461 SUPERFAMILY SSF52540 42 353 5.58E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 Pfam PF01256 Carbohydrate kinase 249 482 5.3E-59 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 SUPERFAMILY SSF64153 6 246 5.36E-67 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 PIRSF PIRSF017184 5 490 1.9E-132 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 SUPERFAMILY SSF53613 227 489 2.96E-77 T 14-10-2018 IPR029056 Ribokinase-like VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 Gene3D G3DSA:3.40.50.10260 4 216 4.7E-61 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 488 2.7E-67 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 Gene3D G3DSA:3.40.1190.20 222 490 2.0E-83 T 14-10-2018 IPR029056 Ribokinase-like VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 9 210 2.3E-49 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 Pfam PF03853 YjeF-related protein N-terminus 30 189 1.0E-46 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 429 439 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 225 490 22.371 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VAB027_847 fcc7101ab9491de42ea03fcbf966200d 490 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 210 23.2 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VAB027_3678 82cb4097ee40b864db21daa9a1224ed5 222 Pfam PF01810 LysE type translocator 16 208 2.4E-39 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_3678 82cb4097ee40b864db21daa9a1224ed5 222 PIRSF PIRSF006324 1 213 1.4E-60 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 SUPERFAMILY SSF52833 4 114 2.25E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF00085 Thioredoxin 7 108 1.0E-13 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:3.40.30.10 1 111 3.4E-22 T 14-10-2018 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 SUPERFAMILY SSF48452 111 246 1.24E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:1.25.40.10 197 284 3.8E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.1E-26 T 14-10-2018 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:1.25.40.10 112 196 9.5E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1665 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.2E-12 T 14-10-2018 VAB027_3638 ceefbc9aec4b0ea06f01376c922378e7 325 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 316 7.7E-117 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VAB027_3638 ceefbc9aec4b0ea06f01376c922378e7 325 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 50.627 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VAB027_3638 ceefbc9aec4b0ea06f01376c922378e7 325 PIRSF PIRSF026649 13 316 4.5E-85 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAB027_3638 ceefbc9aec4b0ea06f01376c922378e7 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 5.9E-76 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SUPERFAMILY SSF50249 227 650 1.14E-143 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SMART SM00955 267 595 2.6E-185 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Gene3D G3DSA:2.40.50.140 77 155 7.7E-11 T 14-10-2018 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Pfam PF00575 S1 RNA binding domain 650 731 5.4E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SUPERFAMILY SSF50249 71 154 1.44E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Gene3D G3DSA:2.40.50.140 653 763 4.0E-27 T 14-10-2018 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SMART SM00357 90 152 1.3E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Pfam PF08206 Ribonuclease B OB domain 91 151 8.2E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Pfam PF00773 RNB domain 267 594 2.3E-107 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 60.084 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 3.7E-272 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SMART SM00316 650 733 9.9E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 6.9E-255 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SUPERFAMILY SSF50249 651 739 5.97E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 Pfam PF08461 Ribonuclease R winged-helix domain 26 88 2.3E-12 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain VAB027_1270 c2941c582d08f9bb404145c6503fedac 821 SUPERFAMILY SSF50249 145 244 3.3E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_15 b131e79d27ec99f759e41d765cb78341 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.8E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAB027_15 b131e79d27ec99f759e41d765cb78341 326 Gene3D G3DSA:3.90.180.10 17 325 7.0E-123 T 14-10-2018 VAB027_15 b131e79d27ec99f759e41d765cb78341 326 SUPERFAMILY SSF51735 116 290 1.51E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_15 b131e79d27ec99f759e41d765cb78341 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 5.5E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VAB027_15 b131e79d27ec99f759e41d765cb78341 326 SMART SM00829 9 324 5.0E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAB027_15 b131e79d27ec99f759e41d765cb78341 326 SUPERFAMILY SSF50129 2 144 9.59E-44 T 14-10-2018 IPR011032 GroES-like superfamily VAB027_15 b131e79d27ec99f759e41d765cb78341 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 5.0E-138 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI VAB027_15 b131e79d27ec99f759e41d765cb78341 326 Gene3D G3DSA:3.40.50.720 126 294 7.0E-123 T 14-10-2018 VAB027_3153 5b739cb26e53e54d1c5041f4354e5160 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 3.3E-161 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAB027_3153 5b739cb26e53e54d1c5041f4354e5160 357 PIRSF PIRSF001361 1 353 4.2E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAB027_3153 5b739cb26e53e54d1c5041f4354e5160 357 SUPERFAMILY SSF51569 8 345 1.83E-137 T 14-10-2018 VAB027_3153 5b739cb26e53e54d1c5041f4354e5160 357 Pfam PF00793 DAHP synthetase I family 41 340 2.0E-104 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_3153 5b739cb26e53e54d1c5041f4354e5160 357 Gene3D G3DSA:3.20.20.70 3 348 5.1E-156 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2746 a764963c19d3bc7ca97c52fba47a2d73 87 Pfam PF08891 YfcL protein 4 84 9.9E-33 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL VAB027_2069 29e2ce60c8a7490f573c4b2a268f67fe 411 SMART SM00283 99 346 1.8E-9 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2069 29e2ce60c8a7490f573c4b2a268f67fe 411 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 173 298 8.2E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2069 29e2ce60c8a7490f573c4b2a268f67fe 411 Gene3D G3DSA:1.10.287.950 52 345 9.9E-38 T 14-10-2018 VAB027_2069 29e2ce60c8a7490f573c4b2a268f67fe 411 SUPERFAMILY SSF58104 105 309 2.75E-41 T 14-10-2018 VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 256 3.3E-31 T 14-10-2018 VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 Gene3D G3DSA:3.40.50.720 1 256 5.9E-42 T 14-10-2018 VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 7.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 7.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_3597 2b3b74df7dd1c72aac81c9718557f470 257 SUPERFAMILY SSF51735 6 257 5.27E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2852 409c70e88609e5beb6d657ce28a26c3c 271 Gene3D G3DSA:2.40.30.10 2 127 3.3E-32 T 14-10-2018 VAB027_2852 409c70e88609e5beb6d657ce28a26c3c 271 SUPERFAMILY SSF63380 10 128 3.97E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_2852 409c70e88609e5beb6d657ce28a26c3c 271 Gene3D G3DSA:3.40.50.80 131 270 7.6E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_2852 409c70e88609e5beb6d657ce28a26c3c 271 Pfam PF04954 Siderophore-interacting protein 134 253 1.8E-34 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VAB027_2852 409c70e88609e5beb6d657ce28a26c3c 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 127 1.4E-33 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VAB027_1780 9a6b2f7054c790ab5826b1be11c0a5a8 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 7.5E-60 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VAB027_1780 9a6b2f7054c790ab5826b1be11c0a5a8 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.892 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.887 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 Gene3D G3DSA:1.20.1640.10 105 298 1.7E-12 T 14-10-2018 VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 5.7E-88 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 3.0E-57 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 SUPERFAMILY SSF82866 74 293 3.53E-41 T 14-10-2018 VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAB027_1400 937f03a57ef609d48176cd1ca58d5d91 315 Pfam PF02355 Protein export membrane protein 111 292 2.5E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 7.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 7.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 7.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 3.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 Pfam PF08448 PAS fold 13 124 2.5E-23 T 14-10-2018 IPR013656 PAS fold-4 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 124 6.2E-7 T 14-10-2018 IPR000014 PAS domain VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 Gene3D G3DSA:3.30.450.20 7 128 1.5E-15 T 14-10-2018 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 Gene3D G3DSA:1.10.10.10 146 215 6.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 SMART SM00421 153 210 2.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 SUPERFAMILY SSF46894 149 215 2.65E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_1055 3f44ddb18e599c17110c0575cd734030 246 SUPERFAMILY SSF55785 12 123 1.68E-12 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 340 354 3.0E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 281 303 3.0E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 3.0E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 3.0E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 419 432 3.0E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 SUPERFAMILY SSF56601 29 444 1.32E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 Gene3D G3DSA:3.50.80.20 92 180 8.6E-11 T 14-10-2018 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 61 441 6.2E-97 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 Gene3D G3DSA:3.40.710.10 27 91 7.8E-6 T 14-10-2018 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 Gene3D G3DSA:3.40.710.10 240 473 1.4E-51 T 14-10-2018 VAB027_3217 17ed748906c091b228ac9d0d009b6b3c 481 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 29 442 1.0E-96 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 SUPERFAMILY SSF56935 29 610 1.36E-112 T 14-10-2018 VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 610 33.836 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 Gene3D G3DSA:2.40.170.20 154 610 3.9E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 Pfam PF00593 TonB dependent receptor 204 609 1.7E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 Gene3D G3DSA:2.170.130.10 20 152 2.5E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_133 4b7e159c24bdac4124478448c3d23fe2 610 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 3.4E-30 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 SMART SM00388 279 346 6.4E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 Pfam PF11884 Domain of unknown function (DUF3404) 20 281 4.1E-91 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 SUPERFAMILY SSF55874 361 483 2.49E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 Gene3D G3DSA:3.30.565.10 344 475 3.0E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 Gene3D G3DSA:1.10.287.130 287 343 3.0E-13 T 14-10-2018 VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 SMART SM00387 380 484 3.6E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 SUPERFAMILY SSF47384 278 336 3.14E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_794 a4dcf2f772cc5203d704f6c6882f66a3 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 482 2.7E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 Gene3D G3DSA:3.40.1260.20 402 489 1.4E-7 T 14-10-2018 VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.7E-173 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.9E-104 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 SMART SM00316 37 122 5.6E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 Gene3D G3DSA:2.40.50.140 31 127 7.0E-32 T 14-10-2018 VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 SUPERFAMILY SSF50249 39 128 1.44E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3411 4850dbf7e1020701cb8dbfd80e64b80b 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.4E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.4E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 Gene3D G3DSA:2.30.170.50 1 83 1.5E-25 T 14-10-2018 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 9.7E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.723 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 SUPERFAMILY SSF143800 1 80 3.1E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1515 d4c98095f80aa392f75b8b583a44e473 85 Pfam PF01197 Ribosomal protein L31 1 78 1.4E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2547 87d105c2775a8e994bba2bb713eb3501 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.885 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB VAB027_2547 87d105c2775a8e994bba2bb713eb3501 173 Gene3D G3DSA:1.20.1550.10 3 173 2.0E-56 T 14-10-2018 IPR023380 DsbB-like superfamily VAB027_2547 87d105c2775a8e994bba2bb713eb3501 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 3.3E-42 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VAB027_2547 87d105c2775a8e994bba2bb713eb3501 173 SUPERFAMILY SSF158442 17 162 1.24E-43 T 14-10-2018 IPR023380 DsbB-like superfamily VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 Pfam PF00696 Amino acid kinase family 6 278 6.2E-47 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 PIRSF PIRSF000726 2 451 1.5E-126 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.7E-122 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 SUPERFAMILY SSF55021 298 394 3.27E-19 T 14-10-2018 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 SUPERFAMILY SSF53633 6 293 1.7E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 SUPERFAMILY SSF55021 377 449 8.59E-15 T 14-10-2018 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 Gene3D G3DSA:1.20.120.1320 42 135 1.1E-99 T 14-10-2018 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 4.0E-122 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 Gene3D G3DSA:3.30.70.260 304 447 1.1E-47 T 14-10-2018 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 Gene3D G3DSA:3.40.1160.10 6 290 1.1E-99 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 Gene3D G3DSA:3.30.70.260 310 383 1.1E-47 T 14-10-2018 VAB027_3440 93cdf54da1b5ee5a2bb4ee845cd5fcc7 451 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 340 2.4E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 SUPERFAMILY SSF53623 15 286 1.44E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 SUPERFAMILY SSF53244 288 417 3.51E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 Gene3D G3DSA:3.90.190.20 289 420 3.6E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 Pfam PF08245 Mur ligase middle domain 54 196 6.5E-8 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 4.3E-108 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 Gene3D G3DSA:3.40.1190.10 1 288 2.9E-94 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VAB027_1686 93dbe08e3b4755d02e7803d6ef93adb9 421 PIRSF PIRSF001563 7 420 3.9E-107 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 SUPERFAMILY SSF46689 1 70 7.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 Gene3D G3DSA:1.10.357.10 61 199 3.1E-29 T 14-10-2018 VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 Gene3D G3DSA:1.10.10.60 2 56 4.5E-18 T 14-10-2018 VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 197 2.9E-9 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VAB027_2082 14095a43fb4ede90d44c6ed3d987e269 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 7.7E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 SMART SM00857 4 139 3.4E-58 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 Pfam PF02796 Helix-turn-helix domain of resolvase 141 180 9.1E-13 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 Gene3D G3DSA:3.40.50.1390 3 128 1.9E-48 T 14-10-2018 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 SUPERFAMILY SSF53041 4 138 6.28E-43 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 Pfam PF00239 Resolvase, N terminal domain 5 138 9.2E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAB027_3732 05aa0c32c3de29d0783bed245a5f392e 194 SUPERFAMILY SSF46689 141 183 3.94E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 SUPERFAMILY SSF74653 118 196 1.44E-24 T 14-10-2018 VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.7E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.7E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.7E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 205 4.4E-19 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 2.3E-19 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VAB027_2187 203b4be9e0940b4f2f6848bd7ebfe0ac 206 Gene3D G3DSA:3.30.1150.10 103 206 4.1E-29 T 14-10-2018 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 9.5E-59 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.401 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 Pfam PF01467 Cytidylyltransferase-like 10 138 9.5E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 SUPERFAMILY SSF52374 8 162 7.78E-45 T 14-10-2018 VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 Gene3D G3DSA:3.40.50.620 2 164 1.3E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3628 d43b4f908c75ab0f754d646c5b9345d9 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 7.3E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAB027_1405 bdc0803d80de41cd33254c1bfd1d638c 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VAB027_1405 bdc0803d80de41cd33254c1bfd1d638c 127 Gene3D G3DSA:3.90.1010.10 1 127 3.0E-59 T 14-10-2018 VAB027_1405 bdc0803d80de41cd33254c1bfd1d638c 127 SUPERFAMILY SSF82649 1 125 2.49E-48 T 14-10-2018 VAB027_1405 bdc0803d80de41cd33254c1bfd1d638c 127 Pfam PF01592 NifU-like N terminal domain 2 126 3.2E-57 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VAB027_3311 d7f5983d5498cd70e236b6cf8eb5f608 333 Pfam PF13531 Bacterial extracellular solute-binding protein 45 284 7.6E-37 T 14-10-2018 VAB027_3311 d7f5983d5498cd70e236b6cf8eb5f608 333 Gene3D G3DSA:3.40.190.10 117 329 1.1E-113 T 14-10-2018 VAB027_3311 d7f5983d5498cd70e236b6cf8eb5f608 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 VAB027_3311 d7f5983d5498cd70e236b6cf8eb5f608 333 SUPERFAMILY SSF53850 22 330 2.91E-71 T 14-10-2018 VAB027_3311 d7f5983d5498cd70e236b6cf8eb5f608 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 330 3.1E-133 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 VAB027_3311 d7f5983d5498cd70e236b6cf8eb5f608 333 Gene3D G3DSA:3.40.190.10 30 299 1.1E-113 T 14-10-2018 VAB027_2145 2235d275f58c278125640da9e40e33f5 157 Gene3D G3DSA:3.30.450.40 2 157 3.2E-63 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_2145 2235d275f58c278125640da9e40e33f5 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VAB027_2145 2235d275f58c278125640da9e40e33f5 157 Pfam PF13185 GAF domain 44 146 9.6E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_2145 2235d275f58c278125640da9e40e33f5 157 SUPERFAMILY SSF55781 4 145 2.45E-39 T 14-10-2018 VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 69 172 4.2E-45 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 172 31.215 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 SUPERFAMILY SSF103088 63 172 1.57E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 Gene3D G3DSA:3.30.1330.60 42 172 5.5E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 Pfam PF00691 OmpA family 71 166 1.0E-21 T 14-10-2018 IPR006665 OmpA-like domain VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 72 94 5.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 102 117 5.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 117 133 5.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2477 3228ffc9e48955186f86081490ed99e3 172 ProSitePatterns PS01068 OmpA-like domain. 104 148 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VAB027_1495 9e29c3c159774851d0b44c9eaac70a4b 294 Gene3D G3DSA:3.40.50.10330 23 289 2.5E-92 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VAB027_1495 9e29c3c159774851d0b44c9eaac70a4b 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.341 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VAB027_1495 9e29c3c159774851d0b44c9eaac70a4b 294 SUPERFAMILY SSF111331 8 290 1.44E-91 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VAB027_1495 9e29c3c159774851d0b44c9eaac70a4b 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-70 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VAB027_1495 9e29c3c159774851d0b44c9eaac70a4b 294 Gene3D G3DSA:2.60.200.30 129 266 2.5E-92 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 19 87 0.004 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 190 260 1.2E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 362 434 1.3E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 103 171 7.8E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 449 520 5.5E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 275 347 8.3E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PIRSF PIRSF002111 1 534 7.3E-218 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 255 360 5.5E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 269 357 2.9E-31 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 358 444 6.0E-24 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 88 174 6.94E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 6 98 7.0E-17 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 189 260 1.9E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 449 520 1.9E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 104 171 1.4E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 275 347 7.9E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 362 434 3.8E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 429 539 4.33E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2559 baaa88c874787b288b6fe544610571e1 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 7.1E-230 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.4E-97 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 347 440 2.69E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 445 528 2.2E-20 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 99 178 3.7E-5 T 14-10-2018 VAB027_2559 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 14-10-2018 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 211 221 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 Gene3D G3DSA:3.30.70.80 45 130 3.0E-17 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 Pfam PF00082 Subtilase family 169 406 1.6E-37 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 SUPERFAMILY SSF52743 145 412 1.44E-81 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 Gene3D G3DSA:3.40.50.200 142 435 3.4E-99 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 PRINTS PR00723 Subtilisin serine protease family (S8) signature 369 385 9.7E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 9.7E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 188 9.7E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 370 380 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 SUPERFAMILY SSF54897 50 130 9.64E-13 T 14-10-2018 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 468 532 4.1E-10 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 174 185 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 Pfam PF05922 Peptidase inhibitor I9 52 128 2.5E-11 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VAB027_135 707e01025abe82fe2788ce527ab5bd22 546 Gene3D G3DSA:2.60.120.380 447 546 2.1E-27 T 14-10-2018 VAB027_2641 23abe9abe9c792c43a54920da269494c 405 Gene3D G3DSA:3.30.420.40 208 377 4.6E-115 T 14-10-2018 VAB027_2641 23abe9abe9c792c43a54920da269494c 405 Gene3D G3DSA:3.30.420.40 91 387 4.6E-115 T 14-10-2018 VAB027_2641 23abe9abe9c792c43a54920da269494c 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_2641 23abe9abe9c792c43a54920da269494c 405 SUPERFAMILY SSF46785 10 77 1.22E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2641 23abe9abe9c792c43a54920da269494c 405 Gene3D G3DSA:1.10.10.10 2 80 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2641 23abe9abe9c792c43a54920da269494c 405 Pfam PF00480 ROK family 88 390 3.3E-68 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_2641 23abe9abe9c792c43a54920da269494c 405 SUPERFAMILY SSF53067 86 393 8.17E-56 T 14-10-2018 VAB027_1275 0a859eca758b7c8692ac0f704b87634a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.479 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VAB027_1275 0a859eca758b7c8692ac0f704b87634a 100 SUPERFAMILY SSF54189 3 92 7.55E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1275 0a859eca758b7c8692ac0f704b87634a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1275 0a859eca758b7c8692ac0f704b87634a 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VAB027_1275 0a859eca758b7c8692ac0f704b87634a 100 Gene3D G3DSA:3.30.70.330 1 100 2.5E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 Pfam PF03466 LysR substrate binding domain 88 302 1.7E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 SUPERFAMILY SSF46785 5 85 1.19E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 Gene3D G3DSA:1.10.10.10 3 91 3.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 Gene3D G3DSA:3.40.190.10 92 299 3.7E-67 T 14-10-2018 VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 SUPERFAMILY SSF53850 89 302 7.71E-40 T 14-10-2018 VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 Gene3D G3DSA:3.40.190.10 163 272 3.7E-67 T 14-10-2018 VAB027_1135 1fde6f4b7e7c77012d5e5c13cb6bfb0c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3401 2e8c13737eb266224f8028b2092791f3 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 319 9.0E-112 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VAB027_3401 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 30 319 3.2E-111 T 14-10-2018 VAB027_3401 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 117 255 3.2E-111 T 14-10-2018 VAB027_3401 2e8c13737eb266224f8028b2092791f3 322 SUPERFAMILY SSF53850 25 321 5.2E-89 T 14-10-2018 VAB027_3401 2e8c13737eb266224f8028b2092791f3 322 Pfam PF16868 NMT1-like family 30 319 1.7E-97 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.8E-20 T 14-10-2018 VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 SUPERFAMILY SSF50129 4 154 1.67E-34 T 14-10-2018 IPR011032 GroES-like superfamily VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 Gene3D G3DSA:3.90.180.10 10 310 1.8E-94 T 14-10-2018 VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 Gene3D G3DSA:3.40.50.720 133 263 1.8E-94 T 14-10-2018 VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 5.7E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 SUPERFAMILY SSF51735 122 245 1.36E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3290 d8c7a527617da9b026af18bb25387aeb 316 SMART SM00829 12 312 6.8E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAB027_3216 89bd252512e0ce0620345cc7c4703e88 339 SUPERFAMILY SSF56935 23 339 2.41E-59 T 14-10-2018 VAB027_3216 89bd252512e0ce0620345cc7c4703e88 339 Pfam PF13609 Gram-negative porin 9 311 6.1E-29 T 14-10-2018 VAB027_3216 89bd252512e0ce0620345cc7c4703e88 339 Gene3D G3DSA:2.40.160.10 22 339 3.6E-67 T 14-10-2018 IPR023614 Porin domain superfamily VAB027_3627 7ab325470d1388cbde6b0ed56510fd64 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 309 4.0E-20 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VAB027_3627 7ab325470d1388cbde6b0ed56510fd64 345 SUPERFAMILY SSF53756 2 341 5.57E-71 T 14-10-2018 VAB027_3627 7ab325470d1388cbde6b0ed56510fd64 345 Gene3D G3DSA:3.40.50.2000 166 342 4.3E-22 T 14-10-2018 VAB027_3627 7ab325470d1388cbde6b0ed56510fd64 345 Gene3D G3DSA:3.40.50.2000 1 145 7.1E-28 T 14-10-2018 VAB027_587 2d1679e4ca548528fe7144baef9a291b 295 SUPERFAMILY SSF53850 98 292 4.52E-21 T 14-10-2018 VAB027_587 2d1679e4ca548528fe7144baef9a291b 295 Pfam PF03466 LysR substrate binding domain 124 291 1.5E-17 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_587 2d1679e4ca548528fe7144baef9a291b 295 Gene3D G3DSA:3.40.190.290 96 283 6.6E-10 T 14-10-2018 VAB027_587 2d1679e4ca548528fe7144baef9a291b 295 Gene3D G3DSA:1.10.10.10 5 90 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_587 2d1679e4ca548528fe7144baef9a291b 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_587 2d1679e4ca548528fe7144baef9a291b 295 SUPERFAMILY SSF46785 4 84 2.01E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_670 989294e3e51240d3306256bcce7a4916 165 SUPERFAMILY SSF55729 3 160 6.97E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_670 989294e3e51240d3306256bcce7a4916 165 Gene3D G3DSA:3.40.630.30 2 162 4.0E-40 T 14-10-2018 VAB027_670 989294e3e51240d3306256bcce7a4916 165 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 3.2E-18 T 14-10-2018 IPR000182 GNAT domain VAB027_1860 577ab86f21ad1189f224153999859286 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1860 577ab86f21ad1189f224153999859286 595 Pfam PF00664 ABC transporter transmembrane region 25 292 3.1E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_1860 577ab86f21ad1189f224153999859286 595 SUPERFAMILY SSF90123 12 331 5.49E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1860 577ab86f21ad1189f224153999859286 595 Gene3D G3DSA:3.40.50.300 344 593 8.4E-66 T 14-10-2018 VAB027_1860 577ab86f21ad1189f224153999859286 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 2.1E-178 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VAB027_1860 577ab86f21ad1189f224153999859286 595 SUPERFAMILY SSF52540 359 580 5.43E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1860 577ab86f21ad1189f224153999859286 595 Pfam PF00005 ABC transporter 369 512 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1860 577ab86f21ad1189f224153999859286 595 SMART SM00382 375 558 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1860 577ab86f21ad1189f224153999859286 595 Gene3D G3DSA:1.20.1560.10 2 334 8.1E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_521 b035b116be99df4648321ee2e2ffadcb 126 Gene3D G3DSA:3.10.180.10 6 125 4.3E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_521 b035b116be99df4648321ee2e2ffadcb 126 SUPERFAMILY SSF54593 1 125 1.13E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2339 797faf87fc84c3138a417f54a86c3128 394 Gene3D G3DSA:1.10.3820.10 14 194 1.2E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VAB027_2339 797faf87fc84c3138a417f54a86c3128 394 SUPERFAMILY SSF48695 12 187 5.3E-61 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VAB027_2339 797faf87fc84c3138a417f54a86c3128 394 PIRSF PIRSF000014 1 394 2.5E-173 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VAB027_2339 797faf87fc84c3138a417f54a86c3128 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 4.6E-74 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VAB027_2339 797faf87fc84c3138a417f54a86c3128 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.0E-206 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VAB027_1539 bef012b82c7a676e37b377c6a78af43e 182 Pfam PF07348 Syd protein (SUKH-2) 7 179 2.3E-71 T 14-10-2018 IPR009948 Syd GO:0009898 VAB027_1539 bef012b82c7a676e37b377c6a78af43e 182 Gene3D G3DSA:3.40.1580.20 1 181 1.6E-70 T 14-10-2018 IPR038228 Syd superfamily VAB027_1539 bef012b82c7a676e37b377c6a78af43e 182 Hamap MF_01104 Protein Syd [syd]. 3 181 37.947 T 14-10-2018 IPR009948 Syd GO:0009898 VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 Gene3D G3DSA:3.60.15.10 1 252 1.7E-94 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.8E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 SMART SM00849 12 166 2.1E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 SUPERFAMILY SSF56281 2 252 2.75E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 Pfam PF00753 Metallo-beta-lactamase superfamily 11 166 8.8E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 5.1E-104 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.104 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_2878 8be218349ea3f7318994ffca3fd9548a 252 PIRSF PIRSF005457 1 252 4.6E-96 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 Pfam PF00581 Rhodanese-like domain 482 563 1.9E-9 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 SMART SM00450 473 567 2.2E-11 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 Gene3D G3DSA:3.50.50.60 115 461 1.5E-189 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 SUPERFAMILY SSF52821 458 563 1.31E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.5E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 SUPERFAMILY SSF55424 344 467 6.19E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.1E-23 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.1E-23 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.1E-23 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.1E-23 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 3.1E-23 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 SUPERFAMILY SSF51905 1 341 1.58E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.6E-19 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.6E-19 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.6E-19 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.6E-19 T 14-10-2018 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 Gene3D G3DSA:3.40.250.10 471 565 6.6E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 1.4E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_522 777c3285ff0deae2238d8bcfb244a30f 567 Gene3D G3DSA:3.50.50.60 3 361 1.5E-189 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1518 9ae1ddb707cd139365386ba803b88cc7 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 2.0E-47 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VAB027_1518 9ae1ddb707cd139365386ba803b88cc7 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.498 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 6.0E-103 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:1.10.286.20 184 223 6.1E-22 T 14-10-2018 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:1.10.8.10 1 55 5.2E-26 T 14-10-2018 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF54713 141 277 8.24E-44 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF54713 55 137 4.14E-19 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 Pfam PF00889 Elongation factor TS 70 260 3.6E-60 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 75.483 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:3.30.479.20 56 139 1.1E-27 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VAB027_2900 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF46934 3 53 1.53E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 VAB027_2144 4d48cc9aba4846114af49894e115b303 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 208 29.954 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VAB027_2144 4d48cc9aba4846114af49894e115b303 208 Pfam PF04352 ProQ/FINO family 8 115 2.1E-42 T 14-10-2018 IPR016103 ProQ/FinO domain VAB027_2144 4d48cc9aba4846114af49894e115b303 208 Gene3D G3DSA:1.10.1710.10 1 119 7.0E-25 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VAB027_2144 4d48cc9aba4846114af49894e115b303 208 Pfam PF17516 ProQ C-terminal domain 159 207 1.2E-22 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VAB027_2144 4d48cc9aba4846114af49894e115b303 208 SUPERFAMILY SSF48657 5 118 6.93E-39 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VAB027_2144 4d48cc9aba4846114af49894e115b303 208 SMART SM00945 5 119 6.5E-59 T 14-10-2018 IPR016103 ProQ/FinO domain VAB027_457 a42d71aff70cda301689006420689160 417 Gene3D G3DSA:3.90.770.10 90 403 6.1E-111 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 342 363 5.8E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 79 100 5.8E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 199 217 5.8E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 240 265 5.8E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 110 130 5.8E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 290 316 5.8E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 354 361 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 SUPERFAMILY SSF56542 7 407 8.89E-78 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 SUPERFAMILY SSF55035 144 259 1.57E-36 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 417 6.2E-112 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_457 a42d71aff70cda301689006420689160 417 Gene3D G3DSA:3.30.70.420 144 259 6.1E-111 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 Pfam PF01202 Shikimate kinase 13 169 3.6E-57 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 Gene3D G3DSA:3.40.50.300 1 172 1.4E-56 T 14-10-2018 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 14-10-2018 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 14-10-2018 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 14-10-2018 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 14-10-2018 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 14-10-2018 VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 SUPERFAMILY SSF52540 4 169 8.2E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_261 6f362c66fdc890e5507664224a9f1b23 174 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.772 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAB027_3096 7c5df5e2d165efcb158118597b0d9fd8 86 SUPERFAMILY SSF109910 3 79 1.14E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VAB027_3096 7c5df5e2d165efcb158118597b0d9fd8 86 Gene3D G3DSA:1.10.150.250 1 86 1.3E-39 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VAB027_3096 7c5df5e2d165efcb158118597b0d9fd8 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 6.7E-25 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 SMART SM00267 195 368 1.3E-58 T 14-10-2018 IPR000160 GGDEF domain VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 SUPERFAMILY SSF47188 1 131 5.49E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 2.3E-8 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 8.9E-52 T 14-10-2018 IPR000160 GGDEF domain VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 1.1E-29 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 Gene3D G3DSA:1.20.120.50 1 134 5.7E-28 T 14-10-2018 IPR035938 Hemerythrin-like superfamily VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 SUPERFAMILY SSF55073 211 368 1.65E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 Gene3D G3DSA:3.30.70.270 191 369 5.8E-56 T 14-10-2018 VAB027_1901 ed1737f0ddfca7452ddccb3fca9c7f37 372 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 364 1.2E-45 T 14-10-2018 IPR000160 GGDEF domain VAB027_2791 7f8a7a0e63c3892a89498161986517f7 78 SUPERFAMILY SSF64307 4 64 3.53E-13 T 14-10-2018 IPR036868 TusA-like domain superfamily VAB027_2791 7f8a7a0e63c3892a89498161986517f7 78 Pfam PF01206 Sulfurtransferase TusA 5 55 7.5E-13 T 14-10-2018 IPR001455 TusA-like domain VAB027_2791 7f8a7a0e63c3892a89498161986517f7 78 Gene3D G3DSA:3.30.110.40 2 72 2.2E-11 T 14-10-2018 IPR036868 TusA-like domain superfamily VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 45 151 1.2E-48 T 14-10-2018 IPR033414 Periplasmic sensor domain VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 Gene3D G3DSA:3.30.450.20 238 351 1.6E-6 T 14-10-2018 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 SUPERFAMILY SSF55785 238 351 3.14E-5 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 636 1.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 Gene3D G3DSA:1.10.287.130 379 478 2.7E-18 T 14-10-2018 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 SUPERFAMILY SSF55874 485 636 6.68E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 SUPERFAMILY SSF47384 396 457 2.55E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 SMART SM00387 526 638 2.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_834 e3a68ac2926eea918fee1ac13d1889cc 648 Gene3D G3DSA:3.30.565.10 483 639 1.7E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_3261 543dbdb5cef13e9cd870b8f00b80d39b 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3261 543dbdb5cef13e9cd870b8f00b80d39b 195 SUPERFAMILY SSF46689 9 88 6.98E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3261 543dbdb5cef13e9cd870b8f00b80d39b 195 SUPERFAMILY SSF48498 106 190 1.84E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_3261 543dbdb5cef13e9cd870b8f00b80d39b 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3261 543dbdb5cef13e9cd870b8f00b80d39b 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3261 543dbdb5cef13e9cd870b8f00b80d39b 195 Gene3D G3DSA:1.10.357.10 1 195 3.1E-83 T 14-10-2018 VAB027_2024 862f84431f1f7af167bda5ef49e0a14e 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 80 332 2.9E-44 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VAB027_2024 862f84431f1f7af167bda5ef49e0a14e 339 Gene3D G3DSA:3.90.850.10 1 338 1.5E-142 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAB027_2024 862f84431f1f7af167bda5ef49e0a14e 339 SUPERFAMILY SSF56529 76 334 6.41E-56 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAB027_1396 7732bd214bb8e17ff1c1d6cd454b17ad 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.749 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAB027_1396 7732bd214bb8e17ff1c1d6cd454b17ad 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 9.9E-161 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAB027_1396 7732bd214bb8e17ff1c1d6cd454b17ad 352 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.4E-134 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAB027_1396 7732bd214bb8e17ff1c1d6cd454b17ad 352 Gene3D G3DSA:2.40.10.240 64 163 6.1E-119 T 14-10-2018 VAB027_1396 7732bd214bb8e17ff1c1d6cd454b17ad 352 SUPERFAMILY SSF111337 1 345 6.8E-141 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAB027_1396 7732bd214bb8e17ff1c1d6cd454b17ad 352 Gene3D G3DSA:3.40.1780.10 14 345 6.1E-119 T 14-10-2018 VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 Gene3D G3DSA:3.40.50.2300 2 121 7.8E-33 T 14-10-2018 VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 SUPERFAMILY SSF52172 2 129 2.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 SUPERFAMILY SSF46894 137 233 5.1E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 SMART SM00862 156 232 2.4E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 Gene3D G3DSA:1.10.10.10 122 236 4.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 Pfam PF00072 Response regulator receiver domain 6 113 5.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2998 561ee4ccbda0bacc3fb10f5c5a5204f4 238 SMART SM00448 4 114 3.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 SUPERFAMILY SSF48498 80 207 7.11E-43 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 Gene3D G3DSA:1.10.357.10 2 208 1.4E-57 T 14-10-2018 VAB027_2381 10a94a3633ab8b6bbe0ca40d0d76a1db 208 SUPERFAMILY SSF46689 4 76 3.49E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1799 20d66ad3f95f7aee87e33de28f77553c 139 Pfam PF12680 SnoaL-like domain 6 109 1.3E-16 T 14-10-2018 IPR037401 SnoaL-like domain VAB027_1799 20d66ad3f95f7aee87e33de28f77553c 139 Gene3D G3DSA:3.10.450.50 4 127 2.3E-23 T 14-10-2018 VAB027_1799 20d66ad3f95f7aee87e33de28f77553c 139 SUPERFAMILY SSF54427 4 131 1.83E-27 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 Pfam PF12626 Polymerase A arginine-rich C-terminus 329 446 1.0E-37 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 SUPERFAMILY SSF81301 23 180 4.8E-40 T 14-10-2018 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 453 7.8E-159 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 Gene3D G3DSA:1.10.3090.10 181 431 4.0E-90 T 14-10-2018 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 SUPERFAMILY SSF81891 181 393 7.98E-48 T 14-10-2018 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 448 37.544 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 Gene3D G3DSA:3.30.460.10 18 179 5.4E-63 T 14-10-2018 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 Pfam PF01743 Poly A polymerase head domain 52 183 1.3E-38 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAB027_3252 a4328bb111eb09b3508cfe2690feca26 457 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 271 3.8E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 Gene3D G3DSA:3.20.20.140 55 341 1.1E-148 T 14-10-2018 VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 SUPERFAMILY SSF51338 1 53 3.6E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 PIRSF PIRSF038994 1 378 5.7E-124 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 Gene3D G3DSA:2.30.40.10 6 373 1.1E-148 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 Pfam PF01979 Amidohydrolase family 51 374 1.3E-39 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 SUPERFAMILY SSF51556 54 347 5.88E-102 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_1680 e1c32a1bef40300c062897ad61505e95 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 3.2E-158 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VAB027_1754 b1529ad3433405027676ae2c100511bb 165 Pfam PF00782 Dual specificity phosphatase, catalytic domain 35 149 1.8E-8 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 VAB027_1754 b1529ad3433405027676ae2c100511bb 165 SUPERFAMILY SSF52799 15 163 9.25E-35 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VAB027_1754 b1529ad3433405027676ae2c100511bb 165 Gene3D G3DSA:3.90.190.10 5 164 2.1E-33 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VAB027_1754 b1529ad3433405027676ae2c100511bb 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VAB027_3574 521809fb6be38d6688aa9d0c3bf3039d 332 Pfam PF13807 G-rich domain on putative tyrosine kinase 254 316 9.2E-10 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VAB027_3574 521809fb6be38d6688aa9d0c3bf3039d 332 Pfam PF02706 Chain length determinant protein 24 126 1.2E-19 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VAB027_2572 8b439cb565af59a26dc30dfd3eef69f0 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 8.4E-76 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VAB027_2572 8b439cb565af59a26dc30dfd3eef69f0 332 Gene3D G3DSA:3.40.190.170 27 329 1.2E-88 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VAB027_2572 8b439cb565af59a26dc30dfd3eef69f0 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 4.5E-103 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VAB027_2572 8b439cb565af59a26dc30dfd3eef69f0 332 PIRSF PIRSF006470 1 332 9.9E-120 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 SUPERFAMILY SSF109604 185 404 7.53E-42 T 14-10-2018 VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 Pfam PF08668 HDOD domain 208 324 3.1E-13 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 SUPERFAMILY SSF141868 5 199 1.7E-27 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 Gene3D G3DSA:3.20.20.450 2 203 1.5E-17 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 Pfam PF00563 EAL domain 74 194 1.7E-13 T 14-10-2018 IPR001633 EAL domain VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 Gene3D G3DSA:1.10.3210.10 204 400 1.8E-22 T 14-10-2018 VAB027_118 1a3220f6c9e86aeccf45a21853736a0c 408 PIRSF PIRSF003180 1 408 2.8E-179 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 SUPERFAMILY SSF48168 10 221 8.11E-74 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 Pfam PF03477 ATP cone domain 6 92 8.5E-19 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 SUPERFAMILY SSF51998 222 739 4.88E-167 T 14-10-2018 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.2E-175 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 5.5E-121 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 Gene3D G3DSA:3.20.70.20 78 742 9.2E-156 T 14-10-2018 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.3E-11 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.0E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.0E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.0E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.0E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.0E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1932 0dc543a2f1d5c8cfa772be637c768cdf 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.0E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 Gene3D G3DSA:1.20.58.370 14 105 3.0E-34 T 14-10-2018 IPR035277 MalF, N-terminal VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 Gene3D G3DSA:1.10.3720.10 280 522 2.4E-68 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 9.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 Gene3D G3DSA:2.40.430.10 128 214 8.5E-60 T 14-10-2018 VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 SUPERFAMILY SSF161098 273 513 3.53E-56 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 Gene3D G3DSA:3.10.650.10 108 278 8.5E-60 T 14-10-2018 VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 SUPERFAMILY SSF160964 24 270 1.96E-84 T 14-10-2018 VAB027_1179 3e18c3376a80639d0b16e552987b59cd 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 2.3E-60 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 4.4E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.4E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 4.4E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 4.4E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 146 3.3E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 SUPERFAMILY SSF52788 1 149 4.97E-45 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 Gene3D G3DSA:3.40.50.2300 1 155 1.3E-62 T 14-10-2018 VAB027_1722 98cd29b975ed5ff04d16ee5438571700 155 SMART SM00226 2 148 6.5E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAB027_2276 c4d51750a48c644543bc5af334fe3349 817 Pfam PF02687 FtsX-like permease family 715 809 2.9E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_2276 c4d51750a48c644543bc5af334fe3349 817 Pfam PF02687 FtsX-like permease family 271 368 1.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 Gene3D G3DSA:3.40.190.10 91 286 7.0E-27 T 14-10-2018 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 Gene3D G3DSA:3.40.190.10 165 265 7.0E-27 T 14-10-2018 VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 Gene3D G3DSA:1.10.10.10 1 90 4.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 SUPERFAMILY SSF46785 2 87 3.3E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 Pfam PF03466 LysR substrate binding domain 86 290 2.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_3700 bab356f93d8551a3c531f995e4497d4d 298 SUPERFAMILY SSF53850 87 291 6.4E-29 T 14-10-2018 VAB027_1499 2ff05903add0fc3d0ebaa9e45175478a 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 6.9E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1499 2ff05903add0fc3d0ebaa9e45175478a 149 Gene3D G3DSA:3.30.700.10 20 148 2.8E-21 T 14-10-2018 VAB027_1499 2ff05903add0fc3d0ebaa9e45175478a 149 SUPERFAMILY SSF54523 19 136 3.19E-19 T 14-10-2018 VAB027_1499 2ff05903add0fc3d0ebaa9e45175478a 149 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 128 1.7E-14 T 14-10-2018 IPR031982 Type IV minor pilin ComP VAB027_1499 2ff05903add0fc3d0ebaa9e45175478a 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 4.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1499 2ff05903add0fc3d0ebaa9e45175478a 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 SUPERFAMILY SSF46689 184 231 9.41E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 SUPERFAMILY SSF46689 234 283 1.12E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 Gene3D G3DSA:1.10.10.60 177 231 3.7E-11 T 14-10-2018 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 SMART SM00342 197 280 1.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 Gene3D G3DSA:1.10.10.60 232 285 1.9E-15 T 14-10-2018 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 Pfam PF02311 AraC-like ligand binding domain 44 153 1.4E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 Pfam PF12833 Helix-turn-helix domain 203 282 3.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 Gene3D G3DSA:2.60.120.10 34 107 2.9E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1060 2016c3307c331b2971d1215ba9cb444d 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.0E-69 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 Gene3D G3DSA:3.40.1280.10 1 160 4.9E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 Gene3D G3DSA:1.10.1270.20 161 247 6.9E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.0E-107 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 SUPERFAMILY SSF75217 1 244 1.77E-101 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 PIRSF PIRSF000386 1 247 3.0E-101 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAB027_3279 8e53cd6a69c6eaa8b03225bbc326292e 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.048 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.523 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 Gene3D G3DSA:3.40.50.460 143 252 3.5E-117 T 14-10-2018 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PIRSF PIRSF000532 1 320 1.2E-129 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 4.6E-131 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 Pfam PF00365 Phosphofructokinase 4 276 3.7E-110 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 Gene3D G3DSA:3.40.50.450 4 287 3.5E-117 T 14-10-2018 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 SUPERFAMILY SSF53784 3 315 4.84E-114 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_207 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 6.6E-84 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAB027_1318 666e836fb5c2a030bea2ec9a681e84bb 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 9.1E-100 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VAB027_1318 666e836fb5c2a030bea2ec9a681e84bb 183 Gene3D G3DSA:3.40.30.10 20 179 2.7E-5 T 14-10-2018 VAB027_1318 666e836fb5c2a030bea2ec9a681e84bb 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 1.7E-76 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 1.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.3E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 SMART SM00418 15 93 7.2E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 Gene3D G3DSA:1.10.10.10 6 100 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 6.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_3169 7d4e59e0c79c8348adddc7117683e3c4 100 SUPERFAMILY SSF46785 9 97 4.23E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 Pfam PF00849 RNA pseudouridylate synthase 67 193 7.6E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 SUPERFAMILY SSF55174 8 60 8.24E-13 T 14-10-2018 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 2.0E-47 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 Pfam PF01479 S4 domain 8 52 2.0E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 Gene3D G3DSA:3.10.290.10 3 61 3.2E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 SUPERFAMILY SSF55120 66 227 2.33E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 Gene3D G3DSA:3.30.70.580 68 227 1.1E-53 T 14-10-2018 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 Gene3D G3DSA:3.30.70.1560 132 205 1.1E-53 T 14-10-2018 VAB027_2865 7b98a5298b0def38ca4bba187efe38f4 328 SMART SM00363 7 64 2.4E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 SUPERFAMILY SSF52540 1 240 4.5E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 484 202.734 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 230 1.3E-21 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 479 7.9E-158 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 436 8.6E-57 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 Gene3D G3DSA:3.40.50.300 1 243 1.9E-56 T 14-10-2018 VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 Gene3D G3DSA:3.40.50.880 252 410 6.5E-18 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_453 db0603000fcda2c0f56556a3f3fb010f 484 SUPERFAMILY SSF52317 191 405 1.48E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1939 1b69e0544fcd0b6d48f9149975bde13a 198 SUPERFAMILY SSF142695 19 172 1.83E-54 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_1939 1b69e0544fcd0b6d48f9149975bde13a 198 Gene3D G3DSA:3.40.50.10990 5 174 1.9E-64 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_1939 1b69e0544fcd0b6d48f9149975bde13a 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 37.968 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_1939 1b69e0544fcd0b6d48f9149975bde13a 198 Pfam PF00925 GTP cyclohydrolase II 19 171 3.0E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 3.6E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 Pfam PF00574 Clp protease 25 205 5.8E-90 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 SUPERFAMILY SSF52096 23 206 1.04E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.537 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 Gene3D G3DSA:3.90.226.10 5 207 8.5E-85 T 14-10-2018 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAB027_2566 b1ce59d5427353110a674f4a4047e7d7 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site VAB027_1765 d0dac9d862cedd7e30295852886181ee 194 SUPERFAMILY SSF103039 4 190 2.22E-31 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_1765 d0dac9d862cedd7e30295852886181ee 194 Gene3D G3DSA:3.40.1550.10 3 190 9.0E-32 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_1765 d0dac9d862cedd7e30295852886181ee 194 Pfam PF04509 CheC-like family 9 43 5.5E-12 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 VAB027_3108 f768862a19a483f5a4f555504cc7aef8 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_3108 f768862a19a483f5a4f555504cc7aef8 601 Gene3D G3DSA:3.40.50.12780 317 459 5.3E-33 T 14-10-2018 VAB027_3108 f768862a19a483f5a4f555504cc7aef8 601 Pfam PF00501 AMP-binding enzyme 14 466 2.2E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_3108 f768862a19a483f5a4f555504cc7aef8 601 Gene3D G3DSA:3.40.50.12780 1 316 5.2E-54 T 14-10-2018 VAB027_3108 f768862a19a483f5a4f555504cc7aef8 601 SUPERFAMILY SSF56801 7 596 1.96E-114 T 14-10-2018 VAB027_3205 caf7baeb36ad5e39d23917fabd5669df 151 Gene3D G3DSA:3.30.300.70 1 80 3.0E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VAB027_3205 caf7baeb36ad5e39d23917fabd5669df 151 SUPERFAMILY SSF75420 2 83 8.37E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VAB027_3205 caf7baeb36ad5e39d23917fabd5669df 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.3E-20 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VAB027_3205 caf7baeb36ad5e39d23917fabd5669df 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.524 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VAB027_3205 caf7baeb36ad5e39d23917fabd5669df 151 SUPERFAMILY SSF74942 84 151 5.1E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VAB027_3205 caf7baeb36ad5e39d23917fabd5669df 151 Pfam PF02576 RimP N-terminal domain 12 83 2.2E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Pfam PF13188 PAS domain 42 93 3.6E-4 T 14-10-2018 IPR000014 PAS domain VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Gene3D G3DSA:3.30.450.20 162 281 1.9E-34 T 14-10-2018 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Gene3D G3DSA:3.30.450.20 36 157 3.8E-31 T 14-10-2018 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 SMART SM00283 379 626 8.5E-95 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 504 1.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 1.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 554 583 1.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 535 1.0E-53 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Gene3D G3DSA:1.10.287.950 325 627 6.1E-87 T 14-10-2018 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 SUPERFAMILY SSF58104 346 626 1.96E-73 T 14-10-2018 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 594 4.7E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 SMART SM00304 553 602 81.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 SMART SM00304 326 378 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Pfam PF13426 PAS domain 179 281 0.0051 T 14-10-2018 IPR000014 PAS domain VAB027_1040 7893c058c1285bcbe5fba5027db68a0f 678 Pfam PF00672 HAMP domain 327 374 3.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 Gene3D G3DSA:1.10.287.950 217 540 6.3E-62 T 14-10-2018 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.0E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 Gene3D G3DSA:3.30.450.20 33 186 3.5E-31 T 14-10-2018 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 503 1.1E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 SMART SM01049 30 124 3.1E-19 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 SUPERFAMILY SSF58104 246 539 3.27E-67 T 14-10-2018 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 Pfam PF17200 Single Cache domain 2 36 185 8.2E-35 T 14-10-2018 IPR033480 Single Cache domain 2 VAB027_3378 d56e14c2e6707140a866958dac9d76ac 541 SMART SM00283 277 538 4.9E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.30.1240.10 90 197 1.5E-74 T 14-10-2018 VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 2.0E-59 T 14-10-2018 IPR000150 Cof family GO:0016787 VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 3.8E-66 T 14-10-2018 VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 14-10-2018 VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.40.50.1000 13 266 1.5E-74 T 14-10-2018 IPR023214 HAD superfamily VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 SUPERFAMILY SSF56784 7 274 2.1E-68 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 14-10-2018 VAB027_115 8d2466a84642c0d8b7afd3189580854d 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 3.9E-31 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VAB027_2888 70eb26529d597b8f29e31ae25e3ab88f 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 43.295 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VAB027_2888 70eb26529d597b8f29e31ae25e3ab88f 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 2.0E-142 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VAB027_2888 70eb26529d597b8f29e31ae25e3ab88f 379 SUPERFAMILY SSF53756 6 378 5.38E-31 T 14-10-2018 VAB027_2888 70eb26529d597b8f29e31ae25e3ab88f 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 2.5E-131 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VAB027_2453 766f26f408942a6b28f84c55b0c1d239 236 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 13 227 35.448 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VAB027_2453 766f26f408942a6b28f84c55b0c1d239 236 Gene3D G3DSA:3.20.20.70 3 230 6.7E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2453 766f26f408942a6b28f84c55b0c1d239 236 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 37 227 3.9E-89 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VAB027_2453 766f26f408942a6b28f84c55b0c1d239 236 SUPERFAMILY SSF51366 15 225 1.46E-48 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_723 8901f2f0ef0675d8d91ba4f0e07e9bca 334 Gene3D G3DSA:3.50.30.60 164 334 5.5E-49 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VAB027_723 8901f2f0ef0675d8d91ba4f0e07e9bca 334 PIRSF PIRSF028757 1 332 5.6E-99 T 14-10-2018 IPR003507 Peptidase family S66 VAB027_723 8901f2f0ef0675d8d91ba4f0e07e9bca 334 Gene3D G3DSA:3.40.50.10740 1 163 1.1E-59 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VAB027_723 8901f2f0ef0675d8d91ba4f0e07e9bca 334 SUPERFAMILY SSF52317 2 168 2.65E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_723 8901f2f0ef0675d8d91ba4f0e07e9bca 334 SUPERFAMILY SSF141986 170 323 1.02E-40 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VAB027_723 8901f2f0ef0675d8d91ba4f0e07e9bca 334 Pfam PF02016 LD-carboxypeptidase 13 316 3.2E-71 T 14-10-2018 IPR003507 Peptidase family S66 VAB027_849 bb1a21d13646c47452f8a56edddf7c88 148 Pfam PF00989 PAS fold 16 133 6.6E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VAB027_849 bb1a21d13646c47452f8a56edddf7c88 148 SUPERFAMILY SSF55785 9 101 4.36E-11 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_849 bb1a21d13646c47452f8a56edddf7c88 148 Gene3D G3DSA:3.30.450.20 6 140 5.3E-30 T 14-10-2018 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 5.0E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 5.0E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 5.0E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 SUPERFAMILY SSF81336 93 262 1.15E-49 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.0E-44 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 Pfam PF00119 ATP synthase A chain 44 262 1.7E-58 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 Gene3D G3DSA:1.20.120.220 92 268 4.7E-66 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3724 b38a2472baab8f524975350c6efd4c49 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.353 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_1915 154cd6cea26161fb239e7b849ea8f1ac 148 SUPERFAMILY SSF51316 23 144 6.8E-52 T 14-10-2018 IPR011057 Mss4-like superfamily VAB027_1915 154cd6cea26161fb239e7b849ea8f1ac 148 Gene3D G3DSA:2.170.150.20 5 147 1.1E-53 T 14-10-2018 VAB027_1915 154cd6cea26161fb239e7b849ea8f1ac 148 Pfam PF01641 SelR domain 28 144 3.1E-47 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_1915 154cd6cea26161fb239e7b849ea8f1ac 148 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 144 6.9E-51 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAB027_1467 238ae143b9a60046ab9c52fb3dea242f 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 56 1.2E-24 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VAB027_1467 238ae143b9a60046ab9c52fb3dea242f 66 SUPERFAMILY SSF46955 7 59 3.48E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_1809 61f0f1880365fe309d50b043293d8359 371 Pfam PF03054 tRNA methyl transferase 11 367 1.2E-141 T 14-10-2018 VAB027_1809 61f0f1880365fe309d50b043293d8359 371 Gene3D G3DSA:2.30.30.280 220 287 2.7E-27 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VAB027_1809 61f0f1880365fe309d50b043293d8359 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 367 8.3E-151 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VAB027_1809 61f0f1880365fe309d50b043293d8359 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 368 40.206 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VAB027_1809 61f0f1880365fe309d50b043293d8359 371 Gene3D G3DSA:3.40.50.620 1 219 3.7E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1809 61f0f1880365fe309d50b043293d8359 371 Gene3D G3DSA:2.40.30.10 289 371 6.2E-33 T 14-10-2018 VAB027_1809 61f0f1880365fe309d50b043293d8359 371 SUPERFAMILY SSF52402 9 251 1.28E-57 T 14-10-2018 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.4E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 589 7.0E-213 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.399 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 SUPERFAMILY SSF46600 190 243 1.44E-12 T 14-10-2018 IPR036876 UVR domain superfamily VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Gene3D G3DSA:1.10.150.20 555 610 1.9E-25 T 14-10-2018 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 SMART SM00278 556 575 0.25 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 SMART SM00278 588 607 13.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 SUPERFAMILY SSF82771 16 100 8.63E-24 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Gene3D G3DSA:3.30.420.340 380 552 4.1E-46 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 4.7E-10 T 14-10-2018 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Pfam PF02151 UvrB/uvrC motif 207 238 2.9E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 1.1E-44 T 14-10-2018 IPR001162 UvrC family homology region VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 SMART SM00465 17 98 1.1E-22 T 14-10-2018 IPR000305 GIY-YIG endonuclease VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 Gene3D G3DSA:3.40.1440.10 6 102 1.2E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAB027_1893 43bb29573b0f4265ae504548ae3cb57a 610 SUPERFAMILY SSF47781 521 609 6.99E-20 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_775 38ac079f0688bb708de9fb6590362070 435 Pfam PF00464 Serine hydroxymethyltransferase 24 399 1.1E-174 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_775 38ac079f0688bb708de9fb6590362070 435 Gene3D G3DSA:3.40.640.10 51 302 8.2E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_775 38ac079f0688bb708de9fb6590362070 435 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 21 435 52.744 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_775 38ac079f0688bb708de9fb6590362070 435 SUPERFAMILY SSF53383 14 434 1.06E-179 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_775 38ac079f0688bb708de9fb6590362070 435 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 236 252 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_775 38ac079f0688bb708de9fb6590362070 435 Gene3D G3DSA:3.90.1150.10 25 406 8.2E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_775 38ac079f0688bb708de9fb6590362070 435 PIRSF PIRSF000412 6 435 2.3E-168 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 9.7E-123 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0037 T 14-10-2018 VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 Gene3D G3DSA:3.40.50.720 1 245 9.3E-76 T 14-10-2018 VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 1.3E-58 T 14-10-2018 VAB027_483 4c2a57e2487df76483fbb168ed20483b 246 SUPERFAMILY SSF51735 3 245 9.94E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.6E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF50465 298 393 2.3E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:2.40.30.10 207 334 2.1E-51 T 14-10-2018 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 6.1E-233 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF52540 6 219 1.77E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:2.40.30.10 338 393 7.3E-30 T 14-10-2018 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:3.40.50.300 1 203 1.6E-70 T 14-10-2018 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.753 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAB027_3521 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VAB027_1667 a94d318381ea9c8b13c7f6b65098d0b5 304 SUPERFAMILY SSF51735 1 291 2.8E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1667 a94d318381ea9c8b13c7f6b65098d0b5 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 4.8E-15 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 VAB027_1667 a94d318381ea9c8b13c7f6b65098d0b5 304 Gene3D G3DSA:3.40.50.720 1 290 8.7E-77 T 14-10-2018 VAB027_1667 a94d318381ea9c8b13c7f6b65098d0b5 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 2.1E-22 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAB027_1667 a94d318381ea9c8b13c7f6b65098d0b5 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 295 5.3E-104 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 SUPERFAMILY SSF55604 10 82 5.62E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 3.6E-34 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 7.5E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.2E-14 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 461 9.4E-205 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VAB027_1546 8dedef6a41b32170e6166670d6a0b8a9 474 Gene3D G3DSA:3.30.1360.60 2 78 1.1E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_2839 522ba705b84679b2531868fd59ee0578 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 432 5.7E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAB027_2839 522ba705b84679b2531868fd59ee0578 434 Pfam PF00460 Flagella basal body rod protein 3 32 1.4E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAB027_2839 522ba705b84679b2531868fd59ee0578 434 SUPERFAMILY SSF117143 78 395 3.66E-70 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VAB027_2839 522ba705b84679b2531868fd59ee0578 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 6.5E-22 T 14-10-2018 IPR011491 Flagellar hook protein FlgE VAB027_2839 522ba705b84679b2531868fd59ee0578 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 7.8E-92 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAB027_2839 522ba705b84679b2531868fd59ee0578 434 Gene3D G3DSA:2.60.98.20 154 315 3.1E-22 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VAB027_2839 522ba705b84679b2531868fd59ee0578 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VAB027_3573 ba38f39fb61381c3389602eeabc84b8e 352 Gene3D G3DSA:3.10.580.10 186 315 6.7E-37 T 14-10-2018 VAB027_3573 ba38f39fb61381c3389602eeabc84b8e 352 SUPERFAMILY SSF54631 180 315 5.36E-26 T 14-10-2018 VAB027_3573 ba38f39fb61381c3389602eeabc84b8e 352 Pfam PF01595 Domain of unknown function DUF21 9 177 3.0E-28 T 14-10-2018 IPR002550 CNNM, transmembrane domain VAB027_3573 ba38f39fb61381c3389602eeabc84b8e 352 Pfam PF00571 CBS domain 260 313 2.8E-6 T 14-10-2018 IPR000644 CBS domain VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 8.2E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 SUPERFAMILY SSF55653 60 149 6.93E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 Gene3D G3DSA:3.10.430.100 61 149 1.8E-30 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 Gene3D G3DSA:3.40.5.10 1 50 6.5E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 SUPERFAMILY SSF55658 1 57 3.84E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 6.2E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-55 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3464 7eb32ac95c1bc7fa4ad01d787464972b 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.285 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 Pfam PF12404 Peptidase 5 81 1.5E-33 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 9.0E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 9.0E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 9.0E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 9.0E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 9.0E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 SUPERFAMILY SSF53187 104 427 1.48E-101 T 14-10-2018 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.3E-102 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 Gene3D G3DSA:3.40.630.10 90 429 1.3E-106 T 14-10-2018 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 PIRSF PIRSF036388 1 429 1.7E-236 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VAB027_1411 a91f0f7e53d78d87ea98434455eb9079 429 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.953 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VAB027_1299 ce33e3797318e45280fde094b380d2c4 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.737 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1299 ce33e3797318e45280fde094b380d2c4 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.4E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1299 ce33e3797318e45280fde094b380d2c4 128 SUPERFAMILY SSF64263 1 119 3.4E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1299 ce33e3797318e45280fde094b380d2c4 128 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1299 ce33e3797318e45280fde094b380d2c4 128 Pfam PF01196 Ribosomal protein L17 20 116 7.6E-35 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1299 ce33e3797318e45280fde094b380d2c4 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2984 7c4944229f1fdc8ba758efcb9ae87d3f 46 Pfam PF17320 Family of unknown function (DUF5363) 4 40 1.5E-8 T 14-10-2018 IPR035292 Protein of unknown function DUF5363 VAB027_529 1b9c7b7c5efa8b3ca72810f51f5ee173 217 Pfam PF00881 Nitroreductase family 9 192 9.8E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VAB027_529 1b9c7b7c5efa8b3ca72810f51f5ee173 217 Gene3D G3DSA:3.40.109.10 1 217 4.3E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAB027_529 1b9c7b7c5efa8b3ca72810f51f5ee173 217 SUPERFAMILY SSF55469 1 216 5.5E-61 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAB027_2060 e0cf23450047acb307dfac6082349bae 160 Gene3D G3DSA:2.40.160.20 18 160 6.8E-23 T 14-10-2018 VAB027_2060 e0cf23450047acb307dfac6082349bae 160 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 3.9E-14 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_2060 e0cf23450047acb307dfac6082349bae 160 SUPERFAMILY SSF56925 17 159 6.8E-20 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_2653 2535a768b93806fa5d634f3efdbaf218 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAB027_2653 2535a768b93806fa5d634f3efdbaf218 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 2.0E-62 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAB027_2653 2535a768b93806fa5d634f3efdbaf218 212 SUPERFAMILY SSF52540 1 209 5.07E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2653 2535a768b93806fa5d634f3efdbaf218 212 Gene3D G3DSA:3.40.50.300 3 212 5.9E-67 T 14-10-2018 VAB027_2653 2535a768b93806fa5d634f3efdbaf218 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.959 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAB027_2653 2535a768b93806fa5d634f3efdbaf218 212 Pfam PF02223 Thymidylate kinase 8 198 7.4E-59 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VAB027_2908 33e0c440224c2913b8d2ec68861a26fb 156 Gene3D G3DSA:3.40.50.960 1 156 4.1E-64 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2908 33e0c440224c2913b8d2ec68861a26fb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.5E-55 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2908 33e0c440224c2913b8d2ec68861a26fb 156 SUPERFAMILY SSF52121 4 154 1.27E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2908 33e0c440224c2913b8d2ec68861a26fb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.4E-57 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_2908 33e0c440224c2913b8d2ec68861a26fb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.34 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_372 df93c012e6a89adfe8a5e8ca0deb05cb 446 SUPERFAMILY SSF50494 142 359 1.94E-26 T 14-10-2018 IPR009003 Peptidase S1, PA clan VAB027_372 df93c012e6a89adfe8a5e8ca0deb05cb 446 Pfam PF13365 Trypsin-like peptidase domain 174 333 3.0E-11 T 14-10-2018 VAB027_372 df93c012e6a89adfe8a5e8ca0deb05cb 446 Gene3D G3DSA:2.40.10.10 163 290 3.3E-7 T 14-10-2018 VAB027_372 df93c012e6a89adfe8a5e8ca0deb05cb 446 Gene3D G3DSA:2.60.120.380 375 439 4.3E-7 T 14-10-2018 VAB027_372 df93c012e6a89adfe8a5e8ca0deb05cb 446 Gene3D G3DSA:2.40.10.10 296 366 1.1E-7 T 14-10-2018 VAB027_743 ab28512eb05130001d036483395af333 126 Gene3D G3DSA:3.10.180.10 5 126 1.4E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_743 ab28512eb05130001d036483395af333 126 SUPERFAMILY SSF54593 3 122 1.93E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_223 bdcd25202af5310eebc647df2d8b6bc9 171 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 2.6E-82 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VAB027_223 bdcd25202af5310eebc647df2d8b6bc9 171 SUPERFAMILY SSF89562 1 161 2.35E-45 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VAB027_223 bdcd25202af5310eebc647df2d8b6bc9 171 Gene3D G3DSA:3.50.30.40 1 161 2.1E-59 T 14-10-2018 VAB027_223 bdcd25202af5310eebc647df2d8b6bc9 171 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 6.3E-68 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VAB027_223 bdcd25202af5310eebc647df2d8b6bc9 171 Pfam PF03737 Aldolase/RraA 6 153 3.9E-37 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VAB027_223 bdcd25202af5310eebc647df2d8b6bc9 171 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.0 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VAB027_2288 f8dfa6deb48a4b9fdce0c0f267528287 257 SMART SM00052 10 247 2.1E-23 T 14-10-2018 IPR001633 EAL domain VAB027_2288 f8dfa6deb48a4b9fdce0c0f267528287 257 Gene3D G3DSA:3.20.20.450 8 253 6.1E-64 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2288 f8dfa6deb48a4b9fdce0c0f267528287 257 Pfam PF00563 EAL domain 25 242 3.5E-47 T 14-10-2018 IPR001633 EAL domain VAB027_2288 f8dfa6deb48a4b9fdce0c0f267528287 257 SUPERFAMILY SSF141868 25 242 4.45E-59 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 224 7.1E-31 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 7.1E-31 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 36 56 7.1E-31 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 17 36 7.1E-31 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 156 176 7.1E-31 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 177 198 7.1E-31 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2407 eb852e4efbbaf93a32c1a4ad0ac5d205 224 Pfam PF00813 FliP family 19 223 3.5E-49 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_1608 0b560fd7cae77a5a2e97446fcf1993eb 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 8.0E-123 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_1608 0b560fd7cae77a5a2e97446fcf1993eb 372 Gene3D G3DSA:3.40.50.2000 3 369 4.4E-163 T 14-10-2018 VAB027_1608 0b560fd7cae77a5a2e97446fcf1993eb 372 SUPERFAMILY SSF53756 2 371 1.08E-138 T 14-10-2018 VAB027_1608 0b560fd7cae77a5a2e97446fcf1993eb 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 370 5.0E-161 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 VAB027_1608 0b560fd7cae77a5a2e97446fcf1993eb 372 Gene3D G3DSA:3.40.50.2000 188 357 4.4E-163 T 14-10-2018 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 Pfam PF00005 ABC transporter 20 161 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 Gene3D G3DSA:2.40.50.100 239 361 4.4E-53 T 14-10-2018 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 Gene3D G3DSA:3.40.50.300 1 238 4.4E-75 T 14-10-2018 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 Gene3D G3DSA:2.40.50.140 287 344 4.4E-53 T 14-10-2018 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 Pfam PF08402 TOBE domain 281 353 1.6E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1177 add65e4520b779ad091ab789fa959b57 373 SMART SM00382 28 211 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1177 add65e4520b779ad091ab789fa959b57 373 SUPERFAMILY SSF52540 4 244 1.95E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1177 add65e4520b779ad091ab789fa959b57 373 SUPERFAMILY SSF50331 236 364 1.51E-32 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 Pfam PF00549 CoA-ligase 151 270 2.9E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 Gene3D G3DSA:3.40.50.720 1 123 1.2E-51 T 14-10-2018 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 1.8E-145 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.242 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 PIRSF PIRSF001553 1 289 3.4E-134 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 SUPERFAMILY SSF52210 123 286 1.14E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 SUPERFAMILY SSF51735 1 122 2.89E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 SMART SM00881 4 100 3.0E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 Pfam PF02629 CoA binding domain 6 99 1.9E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.4E-40 T 14-10-2018 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.4E-40 T 14-10-2018 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.4E-40 T 14-10-2018 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.4E-40 T 14-10-2018 VAB027_2720 34aa025251a1814f6e3bdb72e7354ea6 290 Gene3D G3DSA:3.40.50.261 124 288 9.0E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAB027_3323 76b24aed74b954b6ba3185525167e6e6 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 7.1E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VAB027_3323 76b24aed74b954b6ba3185525167e6e6 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 3.1E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VAB027_3323 76b24aed74b954b6ba3185525167e6e6 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.493 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 Gene3D G3DSA:3.40.50.720 81 246 9.4E-44 T 14-10-2018 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 Pfam PF01817 Chorismate mutase type II 9 87 1.8E-20 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 Pfam PF02153 Prephenate dehydrogenase 134 343 1.7E-31 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 SUPERFAMILY SSF48600 4 88 2.38E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 Gene3D G3DSA:1.20.59.10 1 80 5.5E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 SMART SM00830 9 89 9.7E-29 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-41 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 SUPERFAMILY SSF51735 91 237 1.54E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 SUPERFAMILY SSF48179 241 366 1.11E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 PIRSF PIRSF001499 1 374 2.8E-176 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VAB027_3152 169f03a83cce0a2f0382c340f18659c4 375 Gene3D G3DSA:1.10.3660.10 248 373 1.5E-48 T 14-10-2018 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 SUPERFAMILY SSF52343 250 384 6.02E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 1.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 288 1.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 1.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 354 362 1.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 SUPERFAMILY SSF63380 151 261 1.7E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Pfam PF00970 Oxidoreductase FAD-binding domain 158 261 1.4E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 392 52.794 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Pfam PF00042 Globin 8 103 2.3E-13 T 14-10-2018 IPR000971 Globin GO:0020037 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Gene3D G3DSA:3.40.50.80 262 394 2.4E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Pfam PF00175 Oxidoreductase NAD-binding domain 270 368 4.2E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Gene3D G3DSA:2.40.30.10 152 261 2.2E-34 T 14-10-2018 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 SUPERFAMILY SSF46458 1 142 4.66E-40 T 14-10-2018 IPR009050 Globin-like superfamily VAB027_855 9e1744e9a70ea622fcd7180558824790 394 Gene3D G3DSA:1.10.490.10 1 144 1.6E-53 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 2.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 354 362 2.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_855 9e1744e9a70ea622fcd7180558824790 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 2.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_638 06e657158ca9341977f07cca917e4fae 1013 Pfam PF13476 AAA domain 5 315 7.5E-10 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VAB027_638 06e657158ca9341977f07cca917e4fae 1013 Gene3D G3DSA:3.40.50.300 1 279 3.2E-43 T 14-10-2018 VAB027_638 06e657158ca9341977f07cca917e4fae 1013 Pfam PF13558 Putative exonuclease SbcCD, C subunit 913 971 9.2E-11 T 14-10-2018 VAB027_638 06e657158ca9341977f07cca917e4fae 1013 SUPERFAMILY SSF52540 20 991 4.53E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_650 e4d5c07f3256c870862ccbbba118fabc 59 Gene3D G3DSA:1.20.120.1870 5 59 2.5E-8 T 14-10-2018 VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 SMART SM00267 216 386 6.6E-7 T 14-10-2018 IPR000160 GGDEF domain VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 2.2E-30 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 5.2E-16 T 14-10-2018 IPR000160 GGDEF domain VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 SUPERFAMILY SSF55073 233 387 7.22E-14 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 Gene3D G3DSA:3.30.70.270 211 387 1.2E-17 T 14-10-2018 VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 Pfam PF00563 EAL domain 429 636 9.1E-45 T 14-10-2018 IPR001633 EAL domain VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 Gene3D G3DSA:3.20.20.450 397 643 5.1E-41 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 SUPERFAMILY SSF141868 406 637 4.58E-41 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_3433 2ce2a59e9e8089a380e80c1a3a3a3eda 670 SMART SM00052 397 649 3.8E-18 T 14-10-2018 IPR001633 EAL domain VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 SMART SM00271 275 331 7.3E-4 T 14-10-2018 IPR001623 DnaJ domain VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 SUPERFAMILY SSF81901 25 151 3.53E-21 T 14-10-2018 VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 Gene3D G3DSA:1.25.40.10 17 168 1.4E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 Pfam PF08238 Sel1 repeat 34 69 6.1E-10 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 Pfam PF08238 Sel1 repeat 71 105 2.1E-5 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 Gene3D G3DSA:1.10.287.110 266 338 3.8E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 SMART SM00671 34 69 3.3E-10 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 SMART SM00671 70 105 2.1E-5 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_1872 22dcf041a173573ff776e2211b237cc7 338 SUPERFAMILY SSF46565 276 332 1.1E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_2447 19404ba2e7a281e7ce90450ed17e7dbf 384 Pfam PF01344 Kelch motif 81 130 1.0E-9 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VAB027_2447 19404ba2e7a281e7ce90450ed17e7dbf 384 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 28 376 4.1E-147 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like VAB027_2447 19404ba2e7a281e7ce90450ed17e7dbf 384 Gene3D G3DSA:2.120.10.80 186 376 1.0E-8 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VAB027_2447 19404ba2e7a281e7ce90450ed17e7dbf 384 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 7 384 46.488 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like VAB027_2447 19404ba2e7a281e7ce90450ed17e7dbf 384 SUPERFAMILY SSF117281 28 269 2.48E-23 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VAB027_2447 19404ba2e7a281e7ce90450ed17e7dbf 384 Gene3D G3DSA:2.120.10.80 9 184 6.0E-15 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VAB027_1746 86381c4fddf99a763556f307e038d208 152 SMART SM00344 3 112 2.2E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAB027_1746 86381c4fddf99a763556f307e038d208 152 Gene3D G3DSA:3.30.70.920 56 140 1.3E-23 T 14-10-2018 VAB027_1746 86381c4fddf99a763556f307e038d208 152 SUPERFAMILY SSF54909 63 152 3.22E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_1746 86381c4fddf99a763556f307e038d208 152 Gene3D G3DSA:1.10.10.10 4 55 1.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1746 86381c4fddf99a763556f307e038d208 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAB027_1746 86381c4fddf99a763556f307e038d208 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_1746 86381c4fddf99a763556f307e038d208 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_1746 86381c4fddf99a763556f307e038d208 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAB027_1746 86381c4fddf99a763556f307e038d208 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.8E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAB027_1746 86381c4fddf99a763556f307e038d208 152 SUPERFAMILY SSF46785 2 61 1.26E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1746 86381c4fddf99a763556f307e038d208 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 9.7E-17 T 14-10-2018 VAB027_91 fbaef1d807d20adb814c49340a5e9786 255 Gene3D G3DSA:3.20.20.140 1 254 3.7E-78 T 14-10-2018 VAB027_91 fbaef1d807d20adb814c49340a5e9786 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 2.3E-69 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VAB027_91 fbaef1d807d20adb814c49340a5e9786 255 Pfam PF01026 TatD related DNase 2 251 3.5E-65 T 14-10-2018 IPR001130 TatD family GO:0016788 VAB027_91 fbaef1d807d20adb814c49340a5e9786 255 PIRSF PIRSF005902 1 255 2.0E-70 T 14-10-2018 IPR001130 TatD family GO:0016788 VAB027_91 fbaef1d807d20adb814c49340a5e9786 255 SUPERFAMILY SSF51556 1 253 3.12E-79 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 3.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 3.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 Pfam PF00106 short chain dehydrogenase 3 187 3.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 Gene3D G3DSA:3.40.50.720 1 231 1.1E-40 T 14-10-2018 VAB027_2468 19756489b45a94fdd27b805567dc46e5 231 SUPERFAMILY SSF51735 2 231 3.47E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2880 415a762bc3020b9b3de1ea39d384eefc 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 58.747 T 14-10-2018 IPR022958 Uncharacterised protein family UPF0294 VAB027_2880 415a762bc3020b9b3de1ea39d384eefc 281 Gene3D G3DSA:3.60.10.10 60 280 3.8E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAB027_2880 415a762bc3020b9b3de1ea39d384eefc 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 3.7E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VAB027_2880 415a762bc3020b9b3de1ea39d384eefc 281 SUPERFAMILY SSF56219 59 275 1.57E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 Pfam PF06165 Glycosyltransferase family 36 21 267 2.1E-84 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 SMART SM01068 1 63 9.9E-19 T 14-10-2018 IPR009342 Putative carbohydrate binding domain VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 SUPERFAMILY SSF48208 273 800 1.28E-109 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 SUPERFAMILY SSF74650 1 269 8.16E-80 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 Gene3D G3DSA:2.60.420.10 723 801 1.1E-30 T 14-10-2018 VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 Gene3D G3DSA:2.70.98.40 1 302 3.1E-114 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 Gene3D G3DSA:1.50.10.10 311 722 3.3E-131 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VAB027_3236 85baf89549277c909d1b5e9d3c7511b9 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 727 7.0E-212 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 Gene3D G3DSA:3.40.50.40 210 337 2.0E-46 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 PIRSF PIRSF001220 1 335 5.4E-95 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 PIRSF PIRSF500176 2 333 1.6E-109 T 14-10-2018 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 SMART SM00870 5 324 4.2E-140 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 Pfam PF00710 Asparaginase, N-terminal 5 192 5.7E-66 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 Gene3D G3DSA:3.40.50.1170 1 209 2.1E-94 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 SUPERFAMILY SSF53774 3 336 1.7E-112 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VAB027_2630 9f3e1bbdff513eb7358a66996cdd6df3 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.0E-114 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 SMART SM00304 238 290 6.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 Gene3D G3DSA:1.10.287.950 238 567 3.7E-73 T 14-10-2018 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 533 1.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 SMART SM00283 305 566 1.5E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 SUPERFAMILY SSF58104 258 566 6.15E-75 T 14-10-2018 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 24 49 5.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 430 5.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 432 461 5.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2290 da10d6f7c2cd0f341ab9aedd921db390 567 Pfam PF12729 Four helix bundle sensory module for signal transduction 23 209 6.5E-10 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAB027_224 f839af5fef5d3de77b72bd9e96de931e 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 411 4.0E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_224 f839af5fef5d3de77b72bd9e96de931e 448 PIRSF PIRSF006603 1 444 1.2E-125 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_224 f839af5fef5d3de77b72bd9e96de931e 448 Pfam PF01554 MatE 22 180 6.4E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_224 f839af5fef5d3de77b72bd9e96de931e 448 Pfam PF01554 MatE 245 406 1.8E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 292 1198 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 SUPERFAMILY SSF51011 1093 1199 5.25E-26 T 14-10-2018 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 SUPERFAMILY SSF81296 419 523 1.86E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 SUPERFAMILY SSF49452 170 279 5.89E-28 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 419 504 1.5E-12 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Pfam PF03714 Bacterial pullanase-associated domain 176 279 1.5E-7 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Pfam PF03714 Bacterial pullanase-associated domain 48 162 6.0E-11 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 SUPERFAMILY SSF51445 516 1091 3.64E-138 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Gene3D G3DSA:2.60.40.1110 166 279 1.6E-23 T 14-10-2018 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Gene3D G3DSA:2.60.40.1110 32 163 4.8E-26 T 14-10-2018 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Gene3D G3DSA:2.60.40.10 410 518 1.2E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 SUPERFAMILY SSF49452 17 162 4.58E-25 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Gene3D G3DSA:3.20.20.80 519 1123 1.9E-204 T 14-10-2018 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Gene3D G3DSA:2.60.40.1130 292 408 6.1E-11 T 14-10-2018 VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 SUPERFAMILY SSF81296 284 409 1.4E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Gene3D G3DSA:2.60.40.1180 1125 1200 1.4E-21 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAB027_195 3f2fbccdc7491d4928663d15e64918b3 1201 Pfam PF11852 Domain of unknown function (DUF3372) 1029 1198 7.1E-48 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VAB027_2362 88f27bc9fe4eb0403817d249b4f18ae6 259 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 41.747 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VAB027_2362 88f27bc9fe4eb0403817d249b4f18ae6 259 SUPERFAMILY SSF53335 5 259 3.72E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2362 88f27bc9fe4eb0403817d249b4f18ae6 259 Gene3D G3DSA:3.40.50.150 9 259 4.1E-60 T 14-10-2018 VAB027_2362 88f27bc9fe4eb0403817d249b4f18ae6 259 Pfam PF08241 Methyltransferase domain 52 148 2.5E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 730 847 8.5E-25 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 15 66 6.0E-12 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 57 77 2.6E-34 T 14-10-2018 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 29 54 2.6E-34 T 14-10-2018 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 192 218 2.6E-34 T 14-10-2018 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 260 272 2.6E-34 T 14-10-2018 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 170 191 2.6E-34 T 14-10-2018 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 Pfam PF13244 Domain of unknown function (DUF4040) 562 625 2.2E-13 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 VAB027_878 c7a9bc1ad30b70e60b8def636b224d94 858 Pfam PF00361 Proton-conducting membrane transporter 80 364 1.1E-56 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_2539 3f3c63c6631f3a36e464a31a738d4875 129 Gene3D G3DSA:2.60.40.3230 18 128 4.0E-33 T 14-10-2018 IPR038483 YcfL-like superfamily VAB027_2539 3f3c63c6631f3a36e464a31a738d4875 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.5E-32 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 VAB027_3453 f71414c85f4d3db92e0e6bdfa5bbc4e2 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 10 221 2.9E-52 T 14-10-2018 IPR026387 Outer membrane protein VAB027_3453 f71414c85f4d3db92e0e6bdfa5bbc4e2 221 Pfam PF13505 Outer membrane protein beta-barrel domain 7 221 1.1E-10 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_3061 c06b7132a959a088728e5ce30d77c083 208 SUPERFAMILY SSF55811 2 206 8.51E-46 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_3061 c06b7132a959a088728e5ce30d77c083 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 7.7E-60 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VAB027_3061 c06b7132a959a088728e5ce30d77c083 208 Gene3D G3DSA:3.90.79.10 1 208 1.9E-64 T 14-10-2018 VAB027_3061 c06b7132a959a088728e5ce30d77c083 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_3061 c06b7132a959a088728e5ce30d77c083 208 Pfam PF00293 NUDIX domain 59 175 6.4E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 Gene3D G3DSA:3.40.190.10 114 306 7.0E-44 T 14-10-2018 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 Gene3D G3DSA:3.40.190.10 174 280 7.0E-44 T 14-10-2018 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 SUPERFAMILY SSF46785 17 93 1.43E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 311 1.1E-183 T 14-10-2018 IPR011781 D-serine deaminase transcriptional activator VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 SUPERFAMILY SSF53850 98 311 3.74E-27 T 14-10-2018 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 2.0E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 Pfam PF03466 LysR substrate binding domain 101 309 1.6E-23 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 Gene3D G3DSA:1.10.10.10 17 106 8.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 1.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 1.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_313 a7ebdc9dbd98dd8268f6c15e4abea427 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 1.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 SMART SM00487 20 221 2.1E-61 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 Gene3D G3DSA:3.40.50.300 1 210 3.5E-77 T 14-10-2018 VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 Gene3D G3DSA:3.40.50.300 212 374 1.3E-43 T 14-10-2018 VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 SMART SM00490 257 338 7.7E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 SUPERFAMILY SSF52540 73 358 1.3E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 Pfam PF00270 DEAD/DEAH box helicase 25 195 6.7E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_2081 a4a90db449b759b88d4585fe2669f86c 397 Pfam PF00271 Helicase conserved C-terminal domain 232 337 6.0E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_1015 550e51df2107cf712f8baf80e1ea0c57 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.5E-33 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 VAB027_2264 6d7d1fe268bcf629290e00bd58ae804e 77 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VAB027_2264 6d7d1fe268bcf629290e00bd58ae804e 77 Pfam PF00462 Glutaredoxin 4 60 2.0E-12 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAB027_2264 6d7d1fe268bcf629290e00bd58ae804e 77 Gene3D G3DSA:3.40.30.10 1 73 3.0E-15 T 14-10-2018 VAB027_2264 6d7d1fe268bcf629290e00bd58ae804e 77 SUPERFAMILY SSF52833 3 68 1.5E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3758 5d1d0d95109d644068a3ec9fccdf1adc 404 Gene3D G3DSA:1.10.443.10 204 381 2.8E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_3758 5d1d0d95109d644068a3ec9fccdf1adc 404 Pfam PF17293 Arm DNA-binding domain 4 74 1.4E-5 T 14-10-2018 IPR035386 Arm, DNA-binding domain VAB027_3758 5d1d0d95109d644068a3ec9fccdf1adc 404 Gene3D G3DSA:1.10.150.130 89 203 6.4E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_3758 5d1d0d95109d644068a3ec9fccdf1adc 404 SUPERFAMILY SSF56349 95 376 1.68E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_3758 5d1d0d95109d644068a3ec9fccdf1adc 404 Pfam PF13102 Phage integrase SAM-like domain 94 193 5.0E-24 T 14-10-2018 IPR025269 Phage integrase SAM-like domain VAB027_3758 5d1d0d95109d644068a3ec9fccdf1adc 404 Pfam PF00589 Phage integrase family 207 368 1.1E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_1803 6adbbe4b8175be4663c6b68e4d94c292 413 SUPERFAMILY SSF53335 43 366 1.4E-87 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1803 6adbbe4b8175be4663c6b68e4d94c292 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 3.2E-84 T 14-10-2018 VAB027_1803 6adbbe4b8175be4663c6b68e4d94c292 413 Gene3D G3DSA:3.40.50.150 144 413 1.4E-104 T 14-10-2018 VAB027_1803 6adbbe4b8175be4663c6b68e4d94c292 413 PIRSF PIRSF003085 18 413 4.0E-124 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VAB027_671 bcba07895583df3f5ff03ac7a69490e8 223 Pfam PF06189 5'-nucleotidase 1 218 1.7E-83 T 14-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 VAB027_3031 7ac7f8a30083c5e1219db2a342aa164d 360 Pfam PF00953 Glycosyl transferase family 4 99 283 4.4E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VAB027_3031 7ac7f8a30083c5e1219db2a342aa164d 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.5E-156 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3031 7ac7f8a30083c5e1219db2a342aa164d 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3031 7ac7f8a30083c5e1219db2a342aa164d 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3031 7ac7f8a30083c5e1219db2a342aa164d 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.314 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3031 7ac7f8a30083c5e1219db2a342aa164d 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_3177 4fb8d05606adfb1a73aff5aaae306602 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.9E-33 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VAB027_3177 4fb8d05606adfb1a73aff5aaae306602 221 Gene3D G3DSA:3.40.600.10 1 220 4.2E-54 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VAB027_3177 4fb8d05606adfb1a73aff5aaae306602 221 SMART SM00927 53 151 1.0E-65 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VAB027_3177 4fb8d05606adfb1a73aff5aaae306602 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 149.463 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VAB027_3177 4fb8d05606adfb1a73aff5aaae306602 221 SUPERFAMILY SSF52980 3 220 3.22E-82 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAB027_3177 4fb8d05606adfb1a73aff5aaae306602 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.0E-100 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 5.0E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 5.0E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 SUPERFAMILY SSF55681 10 322 3.19E-83 T 14-10-2018 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.436 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 Gene3D G3DSA:3.30.930.10 1 324 6.3E-110 T 14-10-2018 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 3.8E-128 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VAB027_239 ac2d77ef3356e02a330f4f1e08135770 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 1.2E-43 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_75 bd00a4ea4d8fd1548508f3f64938e81f 201 SUPERFAMILY SSF55718 15 117 5.3E-10 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VAB027_75 bd00a4ea4d8fd1548508f3f64938e81f 201 Pfam PF02036 SCP-2 sterol transfer family 15 111 1.5E-20 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VAB027_3547 2a5bc4af1cf3d69b880cd15c6118befa 209 Pfam PF00929 Exonuclease 31 193 5.5E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_3547 2a5bc4af1cf3d69b880cd15c6118befa 209 SUPERFAMILY SSF53098 25 199 1.78E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3547 2a5bc4af1cf3d69b880cd15c6118befa 209 SMART SM00479 29 202 8.1E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_3547 2a5bc4af1cf3d69b880cd15c6118befa 209 Gene3D G3DSA:3.30.420.10 22 201 4.1E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_2181 fe5496909b53aa2a924991e967989e9e 288 Gene3D G3DSA:3.30.200.20 1 93 1.9E-22 T 14-10-2018 VAB027_2181 fe5496909b53aa2a924991e967989e9e 288 SUPERFAMILY SSF56112 5 282 2.17E-41 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_2181 fe5496909b53aa2a924991e967989e9e 288 PIRSF PIRSF006221 1 288 2.4E-109 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VAB027_2181 fe5496909b53aa2a924991e967989e9e 288 Pfam PF03881 Fructosamine kinase 1 287 1.6E-124 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VAB027_2181 fe5496909b53aa2a924991e967989e9e 288 Gene3D G3DSA:3.90.1200.10 97 288 2.0E-64 T 14-10-2018 VAB027_1168 70da6af91606fcea147d355974ccfdf6 338 Gene3D G3DSA:3.30.70.270 165 336 1.0E-48 T 14-10-2018 VAB027_1168 70da6af91606fcea147d355974ccfdf6 338 SMART SM00267 168 338 1.0E-50 T 14-10-2018 IPR000160 GGDEF domain VAB027_1168 70da6af91606fcea147d355974ccfdf6 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 8.9E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_1168 70da6af91606fcea147d355974ccfdf6 338 SUPERFAMILY SSF55073 184 336 5.49E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1168 70da6af91606fcea147d355974ccfdf6 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 4.7E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 8.5E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 8.5E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 8.5E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 8.5E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 348 2.9E-59 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 SUPERFAMILY SSF64518 167 622 3.01E-26 T 14-10-2018 VAB027_2833 af5dc1cc4901d8427d01660756a716ad 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 622 5.3E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAB027_806 81f9ca51994e6f9e541829e50209b30f 294 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 1.0E-98 T 14-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VAB027_806 81f9ca51994e6f9e541829e50209b30f 294 Gene3D G3DSA:3.20.20.150 3 287 3.2E-63 T 14-10-2018 VAB027_806 81f9ca51994e6f9e541829e50209b30f 294 SUPERFAMILY SSF51658 7 282 4.58E-47 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VAB027_806 81f9ca51994e6f9e541829e50209b30f 294 Pfam PF01261 Xylose isomerase-like TIM barrel 30 238 4.7E-34 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VAB027_566 44de6039d866ca5870ab86f397b7cd90 301 SUPERFAMILY SSF103481 49 141 4.32E-9 T 14-10-2018 VAB027_566 44de6039d866ca5870ab86f397b7cd90 301 SUPERFAMILY SSF103481 199 299 9.68E-8 T 14-10-2018 VAB027_566 44de6039d866ca5870ab86f397b7cd90 301 Pfam PF00892 EamA-like transporter family 152 298 1.5E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_566 44de6039d866ca5870ab86f397b7cd90 301 Pfam PF00892 EamA-like transporter family 5 136 1.8E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_566 44de6039d866ca5870ab86f397b7cd90 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 5 297 6.0E-123 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative VAB027_970 650654c0750a125ac739607735b446fe 236 Gene3D G3DSA:3.40.50.1580 1 236 1.1E-77 T 14-10-2018 VAB027_970 650654c0750a125ac739607735b446fe 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.095 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAB027_970 650654c0750a125ac739607735b446fe 236 SUPERFAMILY SSF53167 3 234 8.9E-93 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAB027_970 650654c0750a125ac739607735b446fe 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_970 650654c0750a125ac739607735b446fe 236 Pfam PF01048 Phosphorylase superfamily 17 219 6.1E-37 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAB027_970 650654c0750a125ac739607735b446fe 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.8E-112 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.779 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 SUPERFAMILY SSF51717 15 208 5.34E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 Pfam PF04551 GcpE protein 14 354 6.2E-131 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.4E-124 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 SUPERFAMILY SSF56014 265 354 2.62E-11 T 14-10-2018 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 Gene3D G3DSA:3.20.20.20 1 261 1.4E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 PIRSF PIRSF004640 1 364 1.0E-145 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAB027_1415 a6071d6c236697b0afc2ce1b5944366b 374 Gene3D G3DSA:3.30.413.10 262 361 4.7E-24 T 14-10-2018 VAB027_2377 17d892230500ef317425d90c4b431fde 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 226 2.2E-32 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VAB027_2377 17d892230500ef317425d90c4b431fde 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 5.4E-18 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VAB027_2377 17d892230500ef317425d90c4b431fde 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.355 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VAB027_2377 17d892230500ef317425d90c4b431fde 233 PIRSF PIRSF037208 1 233 6.4E-82 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VAB027_2377 17d892230500ef317425d90c4b431fde 233 SUPERFAMILY SSF55729 81 231 6.36E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_989 7832b486230bef388a088120bc5b63da 278 Pfam PF00491 Arginase family 71 247 1.8E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VAB027_989 7832b486230bef388a088120bc5b63da 278 Gene3D G3DSA:3.40.800.10 39 254 2.7E-9 T 14-10-2018 VAB027_989 7832b486230bef388a088120bc5b63da 278 SUPERFAMILY SSF52768 44 269 6.48E-24 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VAB027_1317 47afac13d21847dde3a23ece760880f5 96 Pfam PF10795 Protein of unknown function (DUF2607) 5 94 1.8E-40 T 14-10-2018 IPR019731 Protein of unknown function DUF2607 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.9E-91 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.6E-99 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 SUPERFAMILY SSF51366 4 218 4.06E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 Gene3D G3DSA:3.20.20.70 5 222 4.0E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_265 76d7a1dea774d68bb6d3fb45a7c5c873 224 PIRSF PIRSF001461 1 224 3.4E-106 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.3E-27 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.3E-27 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.3E-27 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-27 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.3E-27 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.4E-214 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PIRSF PIRSF000350 1 445 1.5E-81 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 SUPERFAMILY SSF51905 1 361 2.7E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 8.0E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 Gene3D G3DSA:3.30.390.30 339 451 7.6E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 Gene3D G3DSA:3.50.50.60 144 261 1.4E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.1E-64 T 14-10-2018 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 Gene3D G3DSA:3.50.50.60 5 315 1.4E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 SUPERFAMILY SSF55424 337 451 1.19E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAB027_3682 451a4ea0a5ccb5a7fa91e749c2b37112 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.0E-68 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_2841 53cd75e211507ec800cf54ac5424a078 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VAB027_2841 53cd75e211507ec800cf54ac5424a078 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.5E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAB027_2841 53cd75e211507ec800cf54ac5424a078 138 Pfam PF00460 Flagella basal body rod protein 7 32 2.6E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAB027_2841 53cd75e211507ec800cf54ac5424a078 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 7.3E-52 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VAB027_532 f3194113da0855d939affef679cc5ad5 241 Gene3D G3DSA:3.40.50.150 2 167 6.9E-43 T 14-10-2018 VAB027_532 f3194113da0855d939affef679cc5ad5 241 Pfam PF12847 Methyltransferase domain 4 160 1.5E-23 T 14-10-2018 VAB027_532 f3194113da0855d939affef679cc5ad5 241 SUPERFAMILY SSF53335 17 114 9.41E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_532 f3194113da0855d939affef679cc5ad5 241 PIRSF PIRSF028234 1 235 1.0E-128 T 14-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 VAB027_3636 ce9b69062c17b38967f0b878895203fb 196 SUPERFAMILY SSF48498 81 191 6.52E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_3636 ce9b69062c17b38967f0b878895203fb 196 Gene3D G3DSA:1.10.357.10 3 196 1.9E-80 T 14-10-2018 VAB027_3636 ce9b69062c17b38967f0b878895203fb 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.963 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VAB027_3636 ce9b69062c17b38967f0b878895203fb 196 SUPERFAMILY SSF46689 5 78 2.24E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3636 ce9b69062c17b38967f0b878895203fb 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 2.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3140 f788e0e70ee0df1dd6a0e56959b0a98d 369 Gene3D G3DSA:3.40.50.300 114 279 5.0E-9 T 14-10-2018 VAB027_3140 f788e0e70ee0df1dd6a0e56959b0a98d 369 Pfam PF13401 AAA domain 134 268 2.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3140 f788e0e70ee0df1dd6a0e56959b0a98d 369 SUPERFAMILY SSF52540 124 367 6.23E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2676 bbc4c99a2bab9b81436a6a2dd284afb3 71 Gene3D G3DSA:1.10.3390.10 1 71 1.2E-30 T 14-10-2018 IPR023202 YejL-like superfamily VAB027_2676 bbc4c99a2bab9b81436a6a2dd284afb3 71 PIRSF PIRSF006188 1 71 7.5E-37 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAB027_2676 bbc4c99a2bab9b81436a6a2dd284afb3 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.5E-21 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAB027_2676 bbc4c99a2bab9b81436a6a2dd284afb3 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAB027_2676 bbc4c99a2bab9b81436a6a2dd284afb3 71 SUPERFAMILY SSF158651 1 70 1.28E-28 T 14-10-2018 IPR023202 YejL-like superfamily VAB027_2676 bbc4c99a2bab9b81436a6a2dd284afb3 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.131 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 480 1.1E-127 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 Pfam PF00854 POT family 79 442 2.0E-80 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 SUPERFAMILY SSF103473 4 201 3.66E-19 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 67 91 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 Gene3D G3DSA:1.20.1250.20 3 481 1.5E-108 T 14-10-2018 VAB027_1675 913adb9868ac7b730bccb36858de9ce6 493 SUPERFAMILY SSF103473 214 480 3.92E-9 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 PRINTS PR00050 Cold shock protein signature 28 37 9.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 PRINTS PR00050 Cold shock protein signature 43 61 9.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 PRINTS PR00050 Cold shock protein signature 7 22 9.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 PIRSF PIRSF002599 1 70 1.4E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 Gene3D G3DSA:2.40.50.140 2 68 8.9E-28 T 14-10-2018 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 3.2E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 SMART SM00357 6 70 1.5E-26 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_1249 445b8e4a364861e4f85d382ddd70ad7d 70 SUPERFAMILY SSF50249 3 69 7.5E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 Pfam PF08411 Exonuclease C-terminal 210 470 4.8E-104 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 Gene3D G3DSA:1.20.1280.70 358 419 1.6E-25 T 14-10-2018 VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 Gene3D G3DSA:2.30.30.450 212 352 8.4E-55 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 Gene3D G3DSA:3.30.420.10 1 199 1.4E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 Pfam PF00929 Exonuclease 11 191 4.1E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 PIRSF PIRSF000977 1 474 2.9E-198 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VAB027_1913 302b3873eec1e4d1cd0e2dfb5214a046 474 SUPERFAMILY SSF53098 7 472 1.24E-133 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_2739 b1e41123c845f277e623629e1fc5be97 153 Gene3D G3DSA:3.10.129.10 3 144 5.1E-28 T 14-10-2018 VAB027_2739 b1e41123c845f277e623629e1fc5be97 153 SUPERFAMILY SSF54637 5 143 2.49E-23 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_2739 b1e41123c845f277e623629e1fc5be97 153 Pfam PF14539 Domain of unknown function (DUF4442) 5 138 4.9E-25 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VAB027_1343 c6e32285cd28e04215f1cfd9caf7b948 320 Gene3D G3DSA:1.20.58.1130 10 207 1.0E-85 T 14-10-2018 VAB027_1343 c6e32285cd28e04215f1cfd9caf7b948 320 Pfam PF01699 Sodium/calcium exchanger protein 6 145 6.0E-27 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VAB027_1343 c6e32285cd28e04215f1cfd9caf7b948 320 Pfam PF01699 Sodium/calcium exchanger protein 176 317 7.0E-30 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VAB027_1343 c6e32285cd28e04215f1cfd9caf7b948 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 312 5.4E-84 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VAB027_1343 c6e32285cd28e04215f1cfd9caf7b948 320 Gene3D G3DSA:1.20.1420.30 36 310 1.0E-85 T 14-10-2018 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 SUPERFAMILY SSF53822 65 327 8.04E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 Gene3D G3DSA:3.40.50.2300 65 154 7.4E-11 T 14-10-2018 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 Gene3D G3DSA:3.40.50.2300 158 335 1.3E-39 T 14-10-2018 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 Pfam PF13377 Periplasmic binding protein-like domain 174 333 3.6E-26 T 14-10-2018 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 Gene3D G3DSA:1.10.260.40 1 64 1.8E-22 T 14-10-2018 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 2.8E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 SUPERFAMILY SSF47413 7 65 2.25E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_496 d0cd88686dc18c62f4cf13b62c07b629 336 SMART SM00354 7 77 2.4E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1720 27c417283adee84d407c5c4c42099ddc 703 Pfam PF05170 AsmA family 1 595 7.6E-175 T 14-10-2018 IPR007844 AsmA VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 PIRSF PIRSF001491 1 406 5.7E-160 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF53649 1 406 1.31E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF143856 118 234 2.09E-47 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.40.720.10 3 406 8.0E-149 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.3E-43 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.30.70.1250 116 237 8.0E-149 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.078 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAB027_2979 0de93f1f29e90042eccc7ef48ae3f6a7 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.6E-177 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 SMART SM00382 161 312 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 SUPERFAMILY SSF52172 2 186 6.97E-43 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 SUPERFAMILY SSF46689 381 465 3.23E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:3.40.50.2300 1 124 2.8E-40 T 14-10-2018 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Pfam PF02954 Bacterial regulatory protein, Fis family 425 465 1.1E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:3.40.50.300 126 311 5.1E-68 T 14-10-2018 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:1.10.10.60 380 466 2.6E-26 T 14-10-2018 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Pfam PF00158 Sigma-54 interaction domain 141 308 3.6E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:1.10.8.60 312 379 1.1E-17 T 14-10-2018 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 SMART SM00448 4 115 3.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 465 3.5E-249 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 SUPERFAMILY SSF52540 140 384 8.75E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 1.8E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_145 c0454d60d84c185cd5430a540fc9c5f0 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 466 1.8E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_2137 08a87d255fd136060dd60f4af4918ccd 180 PIRSF PIRSF010252 1 178 1.8E-67 T 14-10-2018 IPR009809 Cell division protein ZapC VAB027_2137 08a87d255fd136060dd60f4af4918ccd 180 Pfam PF07126 Cell-division protein ZapC 1 168 7.9E-62 T 14-10-2018 IPR009809 Cell division protein ZapC VAB027_2137 08a87d255fd136060dd60f4af4918ccd 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.204 T 14-10-2018 IPR009809 Cell division protein ZapC VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 Pfam PF00501 AMP-binding enzyme 65 501 1.5E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 Gene3D G3DSA:3.40.50.12780 35 494 4.3E-103 T 14-10-2018 VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 SUPERFAMILY SSF56801 3 602 2.49E-156 T 14-10-2018 VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 Gene3D G3DSA:3.30.300.30 497 623 7.9E-25 T 14-10-2018 VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 2.1E-16 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_2018 5b99824c561e6673c83283ec98a50ccc 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 5.7E-26 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAB027_2594 059434896db297219093552d3af25ca7 315 Gene3D G3DSA:3.40.190.10 94 293 5.7E-60 T 14-10-2018 VAB027_2594 059434896db297219093552d3af25ca7 315 Gene3D G3DSA:1.10.10.10 5 91 2.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2594 059434896db297219093552d3af25ca7 315 Gene3D G3DSA:3.40.190.10 165 267 5.7E-60 T 14-10-2018 VAB027_2594 059434896db297219093552d3af25ca7 315 SUPERFAMILY SSF53850 90 299 1.54E-47 T 14-10-2018 VAB027_2594 059434896db297219093552d3af25ca7 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2594 059434896db297219093552d3af25ca7 315 SUPERFAMILY SSF46785 7 114 6.86E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2594 059434896db297219093552d3af25ca7 315 Pfam PF03466 LysR substrate binding domain 90 296 9.0E-47 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2175 0b8300707c33854e4a77c6530c9f178b 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_2175 0b8300707c33854e4a77c6530c9f178b 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.184 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VAB027_2175 0b8300707c33854e4a77c6530c9f178b 302 Pfam PF00480 ROK family 2 300 2.4E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAB027_2175 0b8300707c33854e4a77c6530c9f178b 302 Gene3D G3DSA:3.30.420.40 4 297 1.8E-100 T 14-10-2018 VAB027_2175 0b8300707c33854e4a77c6530c9f178b 302 Gene3D G3DSA:3.30.420.40 119 290 1.8E-100 T 14-10-2018 VAB027_2175 0b8300707c33854e4a77c6530c9f178b 302 SUPERFAMILY SSF53067 1 299 1.82E-56 T 14-10-2018 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 SUPERFAMILY SSF48179 191 343 5.02E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 3.8E-46 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 Gene3D G3DSA:1.10.1040.10 201 344 4.5E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 SUPERFAMILY SSF51735 15 190 2.18E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 Gene3D G3DSA:3.40.50.720 3 199 1.1E-51 T 14-10-2018 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.8E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PIRSF PIRSF000114 10 344 3.7E-97 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.299 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.4E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.4E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.4E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.4E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.4E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_242 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.4E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAB027_2374 0214887cd0f6fdafde096c1c3d9be042 82 Gene3D G3DSA:1.10.1900.30 9 76 5.5E-34 T 14-10-2018 IPR038191 YciN superfamily VAB027_2374 0214887cd0f6fdafde096c1c3d9be042 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 6.1E-42 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 Pfam PF00155 Aminotransferase class I and II 26 392 7.7E-80 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 SUPERFAMILY SSF53383 1 391 2.07E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.4E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.4E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.4E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.4E-39 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 Gene3D G3DSA:3.40.640.10 60 300 1.7E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1970 44c8597fcefbab5c7651463e37264ca1 396 Gene3D G3DSA:3.90.1150.10 5 392 1.7E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_2224 a3166960675d0f0bd66c88f34e0f486a 177 Gene3D G3DSA:1.25.40.20 27 176 1.9E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VAB027_2224 a3166960675d0f0bd66c88f34e0f486a 177 SMART SM00248 107 138 1000.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VAB027_2224 a3166960675d0f0bd66c88f34e0f486a 177 SMART SM00248 74 103 0.018 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VAB027_2224 a3166960675d0f0bd66c88f34e0f486a 177 SMART SM00248 41 70 26.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VAB027_2224 a3166960675d0f0bd66c88f34e0f486a 177 Pfam PF12796 Ankyrin repeats (3 copies) 45 130 7.6E-12 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain VAB027_2224 a3166960675d0f0bd66c88f34e0f486a 177 SUPERFAMILY SSF48403 41 162 2.02E-25 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VAB027_2736 b3a253cd073e84f1e7e7fc52a44750ac 229 Pfam PF04172 LrgB-like family 14 224 3.9E-70 T 14-10-2018 IPR007300 CidB/LrgB family VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 258 2.0E-29 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 4.0E-96 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 Gene3D G3DSA:2.40.50.100 58 186 1.1E-70 T 14-10-2018 VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 Gene3D G3DSA:2.40.30.170 45 268 1.1E-70 T 14-10-2018 VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 Gene3D G3DSA:1.10.287.470 93 152 1.1E-70 T 14-10-2018 VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 Gene3D G3DSA:2.40.420.20 269 337 1.1E-70 T 14-10-2018 VAB027_1551 726bcb6d8b08e35b28a010a9bf071fc4 352 SUPERFAMILY SSF111369 48 264 1.7E-38 T 14-10-2018 VAB027_3344 11dd8e17517770994578757483b992ed 287 SUPERFAMILY SSF50182 120 185 2.68E-17 T 14-10-2018 IPR010920 LSM domain superfamily VAB027_3344 11dd8e17517770994578757483b992ed 287 SUPERFAMILY SSF82861 33 118 7.45E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VAB027_3344 11dd8e17517770994578757483b992ed 287 Gene3D G3DSA:2.30.30.60 135 184 1.4E-21 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VAB027_3344 11dd8e17517770994578757483b992ed 287 Pfam PF05552 Conserved TM helix 21 69 8.7E-11 T 14-10-2018 IPR008910 Conserved TM helix VAB027_3344 11dd8e17517770994578757483b992ed 287 Gene3D G3DSA:3.30.70.100 185 279 2.5E-30 T 14-10-2018 VAB027_3344 11dd8e17517770994578757483b992ed 287 SUPERFAMILY SSF82689 186 284 3.66E-35 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VAB027_3344 11dd8e17517770994578757483b992ed 287 Pfam PF00924 Mechanosensitive ion channel 77 274 9.1E-59 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAB027_3344 11dd8e17517770994578757483b992ed 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VAB027_2106 9b77d57d201307db15e067227d32adee 315 Pfam PF00582 Universal stress protein family 4 148 9.3E-13 T 14-10-2018 IPR006016 UspA VAB027_2106 9b77d57d201307db15e067227d32adee 315 Pfam PF00582 Universal stress protein family 176 301 9.7E-16 T 14-10-2018 IPR006016 UspA VAB027_2106 9b77d57d201307db15e067227d32adee 315 Gene3D G3DSA:3.40.50.12370 1 312 3.2E-112 T 14-10-2018 VAB027_2106 9b77d57d201307db15e067227d32adee 315 SUPERFAMILY SSF52402 4 159 1.26E-24 T 14-10-2018 VAB027_2106 9b77d57d201307db15e067227d32adee 315 SUPERFAMILY SSF52402 173 309 3.85E-24 T 14-10-2018 VAB027_136 1830247090a6d3b4259f992b101b613a 152 Gene3D G3DSA:3.30.70.330 44 151 5.6E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAB027_136 1830247090a6d3b4259f992b101b613a 152 SMART SM00360 65 137 4.4E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VAB027_136 1830247090a6d3b4259f992b101b613a 152 SUPERFAMILY SSF54928 45 143 5.51E-26 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VAB027_136 1830247090a6d3b4259f992b101b613a 152 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 7.2E-17 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 Pfam PF03486 HI0933-like protein 6 393 2.1E-156 T 14-10-2018 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 Gene3D G3DSA:3.50.50.60 8 389 1.1E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_72 cbea39fd01411f21540f879b95720bc5 395 SUPERFAMILY SSF160996 191 339 3.66E-42 T 14-10-2018 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 1.0E-8 T 14-10-2018 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 14-10-2018 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.0E-8 T 14-10-2018 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 2.7E-129 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VAB027_72 cbea39fd01411f21540f879b95720bc5 395 Gene3D G3DSA:2.40.30.10 189 340 1.1E-130 T 14-10-2018 VAB027_72 cbea39fd01411f21540f879b95720bc5 395 Gene3D G3DSA:1.10.8.260 263 323 1.1E-130 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily VAB027_72 cbea39fd01411f21540f879b95720bc5 395 SUPERFAMILY SSF51905 1 395 3.95E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_8 34b40f34b4cb70b792d3f749e29db3c6 418 SUPERFAMILY SSF53383 13 411 4.59E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_8 34b40f34b4cb70b792d3f749e29db3c6 418 Pfam PF00155 Aminotransferase class I and II 68 399 1.1E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_8 34b40f34b4cb70b792d3f749e29db3c6 418 Gene3D G3DSA:3.40.640.10 1 416 4.0E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_507 e1cc52310163a308d7983ec61af30be1 204 SUPERFAMILY SSF103088 88 199 1.96E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_507 e1cc52310163a308d7983ec61af30be1 204 Gene3D G3DSA:3.30.1330.60 64 202 4.6E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_507 e1cc52310163a308d7983ec61af30be1 204 PRINTS PR01021 OMPA domain signature 129 144 2.9E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_507 e1cc52310163a308d7983ec61af30be1 204 PRINTS PR01021 OMPA domain signature 99 121 2.9E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_507 e1cc52310163a308d7983ec61af30be1 204 PRINTS PR01021 OMPA domain signature 144 160 2.9E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_507 e1cc52310163a308d7983ec61af30be1 204 Pfam PF00691 OmpA family 99 193 5.6E-20 T 14-10-2018 IPR006665 OmpA-like domain VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 SUPERFAMILY SSF63411 281 466 1.0E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Gene3D G3DSA:3.30.830.10 526 730 2.8E-41 T 14-10-2018 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Gene3D G3DSA:3.30.830.10 47 268 7.1E-66 T 14-10-2018 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Pfam PF05193 Peptidase M16 inactive domain 219 394 1.0E-29 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Pfam PF05193 Peptidase M16 inactive domain 686 856 1.0E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Pfam PF00675 Insulinase (Peptidase family M16) 63 179 5.9E-18 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Pfam PF00675 Insulinase (Peptidase family M16) 539 653 3.7E-10 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 SUPERFAMILY SSF63411 737 942 8.61E-39 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 SUPERFAMILY SSF63411 49 258 8.67E-55 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 SUPERFAMILY SSF63411 520 721 3.17E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Gene3D G3DSA:3.30.830.10 274 470 1.8E-34 T 14-10-2018 VAB027_3288 af49b1a43bff913fb6a1e6e5829c6a3a 951 Gene3D G3DSA:3.30.830.10 739 935 1.3E-36 T 14-10-2018 VAB027_2127 92c191ceb6edcd6aadfe412981b26f9b 149 Gene3D G3DSA:1.10.1220.10 98 149 6.3E-21 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAB027_2127 92c191ceb6edcd6aadfe412981b26f9b 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.3E-26 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VAB027_2127 92c191ceb6edcd6aadfe412981b26f9b 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.849 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VAB027_2127 92c191ceb6edcd6aadfe412981b26f9b 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-72 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VAB027_2127 92c191ceb6edcd6aadfe412981b26f9b 149 Gene3D G3DSA:1.20.1270.380 1 89 7.1E-49 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily VAB027_2127 92c191ceb6edcd6aadfe412981b26f9b 149 Pfam PF06303 MatP N-terminal domain 2 85 2.9E-42 T 14-10-2018 IPR035087 MatP, N-terminal VAB027_2787 f7cacb4875c102540dc794f733ab7db0 180 SUPERFAMILY SSF55021 1 84 3.16E-18 T 14-10-2018 VAB027_2787 f7cacb4875c102540dc794f733ab7db0 180 SUPERFAMILY SSF55021 87 176 1.33E-21 T 14-10-2018 VAB027_2787 f7cacb4875c102540dc794f733ab7db0 180 Gene3D G3DSA:3.30.70.260 87 180 2.0E-46 T 14-10-2018 VAB027_2787 f7cacb4875c102540dc794f733ab7db0 180 PIRSF PIRSF028103 1 178 1.8E-60 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VAB027_2787 f7cacb4875c102540dc794f733ab7db0 180 Gene3D G3DSA:3.30.70.260 1 85 1.7E-26 T 14-10-2018 VAB027_2787 f7cacb4875c102540dc794f733ab7db0 180 Pfam PF13740 ACT domain 3 78 7.6E-24 T 14-10-2018 VAB027_3157 3e2fc6ad04081f7011597d8c335a9069 370 SUPERFAMILY SSF53067 6 343 3.3E-25 T 14-10-2018 VAB027_3157 3e2fc6ad04081f7011597d8c335a9069 370 Gene3D G3DSA:3.30.420.40 12 364 1.0E-133 T 14-10-2018 VAB027_3157 3e2fc6ad04081f7011597d8c335a9069 370 Gene3D G3DSA:3.30.420.40 146 329 1.0E-133 T 14-10-2018 VAB027_3157 3e2fc6ad04081f7011597d8c335a9069 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.873 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VAB027_3157 3e2fc6ad04081f7011597d8c335a9069 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 1.9E-180 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VAB027_2931 f5d356595718b5b48468549a1a395c1a 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.043 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VAB027_2931 f5d356595718b5b48468549a1a395c1a 210 PIRSF PIRSF006102 3 210 4.0E-73 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_2931 f5d356595718b5b48468549a1a395c1a 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.0E-108 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VAB027_2931 f5d356595718b5b48468549a1a395c1a 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 3.6E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_320 19c0982764c67a2c33be5e8d02f8e5c2 316 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.2E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_320 19c0982764c67a2c33be5e8d02f8e5c2 316 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.2E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_320 19c0982764c67a2c33be5e8d02f8e5c2 316 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 73 84 1.2E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_320 19c0982764c67a2c33be5e8d02f8e5c2 316 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 268 1.3E-76 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VAB027_320 19c0982764c67a2c33be5e8d02f8e5c2 316 SUPERFAMILY SSF56601 10 284 5.51E-60 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_320 19c0982764c67a2c33be5e8d02f8e5c2 316 Gene3D G3DSA:3.40.710.10 19 315 1.3E-67 T 14-10-2018 VAB027_3258 a9b7a323c01b6125a0de718b09318412 548 SUPERFAMILY SSF52091 439 541 2.35E-11 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_3258 a9b7a323c01b6125a0de718b09318412 548 Pfam PF00916 Sulfate permease family 11 376 2.1E-83 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAB027_3258 a9b7a323c01b6125a0de718b09318412 548 Gene3D G3DSA:3.30.750.24 427 548 1.3E-15 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_3258 a9b7a323c01b6125a0de718b09318412 548 Pfam PF01740 STAS domain 440 533 2.0E-11 T 14-10-2018 IPR002645 STAS domain VAB027_1541 1959002e481ffbe34aa2801fd4dad915 269 Pfam PF03180 NLPA lipoprotein 33 269 1.3E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family VAB027_1541 1959002e481ffbe34aa2801fd4dad915 269 Gene3D G3DSA:3.40.190.10 34 263 9.2E-94 T 14-10-2018 VAB027_1541 1959002e481ffbe34aa2801fd4dad915 269 Gene3D G3DSA:3.40.190.10 115 219 9.2E-94 T 14-10-2018 VAB027_1541 1959002e481ffbe34aa2801fd4dad915 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 6.9E-125 T 14-10-2018 IPR004872 Lipoprotein NlpA family VAB027_1541 1959002e481ffbe34aa2801fd4dad915 269 SUPERFAMILY SSF53850 32 269 6.29E-80 T 14-10-2018 VAB027_1541 1959002e481ffbe34aa2801fd4dad915 269 PIRSF PIRSF002854 1 269 2.0E-100 T 14-10-2018 IPR004872 Lipoprotein NlpA family VAB027_3385 63e225457bdc549c3ab6f484afae32bf 781 Gene3D G3DSA:2.60.450.10 50 99 7.4E-9 T 14-10-2018 VAB027_3385 63e225457bdc549c3ab6f484afae32bf 781 Pfam PF03968 OstA-like protein 57 189 3.5E-19 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VAB027_3385 63e225457bdc549c3ab6f484afae32bf 781 Pfam PF04453 Organic solvent tolerance protein 298 682 6.5E-112 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VAB027_3385 63e225457bdc549c3ab6f484afae32bf 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 753 19.857 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 Gene3D G3DSA:3.30.470.20 197 300 1.1E-39 T 14-10-2018 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.3E-48 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.8E-140 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.395 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 Gene3D G3DSA:3.40.50.20 1 129 4.9E-52 T 14-10-2018 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 SUPERFAMILY SSF52440 2 122 1.01E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-79 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 Gene3D G3DSA:3.30.1490.20 138 196 8.9E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_3355 edee8b26f58c77820bb642b49c253e3c 318 SUPERFAMILY SSF56059 123 313 1.08E-59 T 14-10-2018 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 Gene3D G3DSA:2.40.50.140 1 70 8.3E-31 T 14-10-2018 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 SMART SM00357 6 70 7.7E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.8E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 28 37 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 7 22 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 PRINTS PR00050 Cold shock protein signature 43 61 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 PIRSF PIRSF002599 1 70 8.8E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_870 af592fa3625215f70e72c13a0e3daf99 70 SUPERFAMILY SSF50249 3 69 1.76E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_2617 e6e55f36b9b4a33dac15922ad78095f2 183 Pfam PF01694 Rhomboid family 33 172 5.0E-14 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VAB027_2617 e6e55f36b9b4a33dac15922ad78095f2 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 6.5E-51 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VAB027_2617 e6e55f36b9b4a33dac15922ad78095f2 183 SUPERFAMILY SSF144091 3 172 1.12E-27 T 14-10-2018 VAB027_2617 e6e55f36b9b4a33dac15922ad78095f2 183 Gene3D G3DSA:1.20.1540.10 1 180 7.7E-18 T 14-10-2018 IPR035952 Rhomboid-like superfamily VAB027_1236 1b0ed05d8b9c0cc4ae88835fb0ee5c4c 359 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 214 220 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_1236 1b0ed05d8b9c0cc4ae88835fb0ee5c4c 359 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 211 223 2.9E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_1236 1b0ed05d8b9c0cc4ae88835fb0ee5c4c 359 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 5 21 2.9E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_1236 1b0ed05d8b9c0cc4ae88835fb0ee5c4c 359 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 2.9E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_1236 1b0ed05d8b9c0cc4ae88835fb0ee5c4c 359 SUPERFAMILY SSF53335 3 296 3.19E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1236 1b0ed05d8b9c0cc4ae88835fb0ee5c4c 359 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 5 296 3.8E-29 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_1987 df316fc26af9c15cdbe62798c4ee9969 292 SUPERFAMILY SSF103481 48 133 5.49E-5 T 14-10-2018 VAB027_1987 df316fc26af9c15cdbe62798c4ee9969 292 SUPERFAMILY SSF103481 182 280 5.62E-10 T 14-10-2018 VAB027_1987 df316fc26af9c15cdbe62798c4ee9969 292 Pfam PF00892 EamA-like transporter family 146 276 4.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1836 b5cf22563a20aa20b2a72418e7301eee 165 SUPERFAMILY SSF52172 1 143 1.2E-19 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1836 b5cf22563a20aa20b2a72418e7301eee 165 Pfam PF00072 Response regulator receiver domain 6 126 1.3E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1836 b5cf22563a20aa20b2a72418e7301eee 165 Gene3D G3DSA:3.40.50.2300 5 142 2.6E-18 T 14-10-2018 VAB027_1836 b5cf22563a20aa20b2a72418e7301eee 165 SMART SM00448 4 125 2.5E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1018 7a8b5f68f1f7cae39cc802cc70b738fd 658 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 3.2E-146 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 VAB027_1512 e681b92c31a7d64608c2e6a35ebb9e57 214 Pfam PF04391 Protein of unknown function (DUF533) 37 211 1.1E-62 T 14-10-2018 IPR007486 Inner membrane protein YebE VAB027_1512 e681b92c31a7d64608c2e6a35ebb9e57 214 Gene3D G3DSA:1.10.3680.10 82 213 2.7E-11 T 14-10-2018 IPR029024 TerB-like VAB027_1512 e681b92c31a7d64608c2e6a35ebb9e57 214 SUPERFAMILY SSF158682 71 212 8.24E-27 T 14-10-2018 IPR029024 TerB-like VAB027_3240 a83467d77f75013e84f289ebab867916 337 PIRSF PIRSF002825 4 337 1.6E-97 T 14-10-2018 IPR026045 Ferric binding protein VAB027_3240 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 25 297 9.7E-123 T 14-10-2018 VAB027_3240 a83467d77f75013e84f289ebab867916 337 SUPERFAMILY SSF53850 23 334 6.14E-75 T 14-10-2018 VAB027_3240 a83467d77f75013e84f289ebab867916 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 297 1.9E-18 T 14-10-2018 VAB027_3240 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 120 328 9.7E-123 T 14-10-2018 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 SUPERFAMILY SSF52343 452 607 2.75E-52 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 607 2.7E-256 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Pfam PF00667 FAD binding domain 239 432 1.2E-32 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 2.7E-28 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 1.3E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00369 Flavodoxin signature 177 196 1.9E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00369 Flavodoxin signature 153 163 1.9E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00369 Flavodoxin signature 121 132 1.9E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PRINTS PR00369 Flavodoxin signature 73 86 1.9E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Gene3D G3DSA:1.20.990.10 288 392 9.4E-75 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Pfam PF00258 Flavodoxin 74 204 2.0E-31 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 PIRSF PIRSF000207 7 607 1.7E-267 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 SUPERFAMILY SSF52218 71 216 2.19E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 7 607 50.225 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Gene3D G3DSA:2.40.30.10 240 447 9.4E-75 T 14-10-2018 VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Gene3D G3DSA:3.40.50.360 63 227 4.0E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 SUPERFAMILY SSF63380 237 453 3.4E-66 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_3451 97374d8e31da268e7f06523f15e9803b 607 Gene3D G3DSA:3.40.50.80 453 607 3.6E-60 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_2779 f120bdaa381f46e0fc94fc1d59af7e8c 118 Pfam PF11169 Protein of unknown function (DUF2956) 9 113 5.9E-40 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 SMART SM00490 259 340 3.7E-34 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Gene3D G3DSA:3.40.50.300 1 211 5.8E-73 T 14-10-2018 VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Gene3D G3DSA:3.30.70.330 485 554 5.0E-11 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 556 41.913 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 SMART SM00487 25 223 1.5E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 SUPERFAMILY SSF52540 74 361 1.3E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 2.7E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Pfam PF00270 DEAD/DEAH box helicase 30 196 3.0E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Gene3D G3DSA:3.40.50.300 215 433 1.6E-51 T 14-10-2018 VAB027_379 33040bbf91f5ac22128af82725a3cd1f 643 Pfam PF03880 DbpA RNA binding domain 484 551 2.6E-17 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VAB027_185 5cbb5b6af6a47053be104a96c498c6f8 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.7E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAB027_185 5cbb5b6af6a47053be104a96c498c6f8 90 SMART SM01409 8 61 2.4E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAB027_185 5cbb5b6af6a47053be104a96c498c6f8 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_185 5cbb5b6af6a47053be104a96c498c6f8 90 SUPERFAMILY SSF63562 1 78 6.67E-26 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAB027_185 5cbb5b6af6a47053be104a96c498c6f8 90 Gene3D G3DSA:3.90.940.10 1 90 9.3E-30 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAB027_185 5cbb5b6af6a47053be104a96c498c6f8 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.0E-29 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAB027_273 267e0b42a826fa8b78a3c05227377d4f 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 3.9E-132 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VAB027_273 267e0b42a826fa8b78a3c05227377d4f 339 Gene3D G3DSA:3.40.630.30 1 274 1.6E-113 T 14-10-2018 VAB027_273 267e0b42a826fa8b78a3c05227377d4f 339 SUPERFAMILY SSF55729 1 337 1.67E-129 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_273 267e0b42a826fa8b78a3c05227377d4f 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.9E-133 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VAB027_273 267e0b42a826fa8b78a3c05227377d4f 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 5.4E-139 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VAB027_3315 506580a629dce9941525a7797312cce5 335 SUPERFAMILY SSF88659 168 241 1.83E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_3315 506580a629dce9941525a7797312cce5 335 Pfam PF00140 Sigma-70 factor, region 1.2 57 90 2.6E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3315 506580a629dce9941525a7797312cce5 335 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 9 329 39.756 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3315 506580a629dce9941525a7797312cce5 335 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 119 132 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 143 151 1.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 303 314 1.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 288 303 1.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 119 132 1.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 267 279 1.5E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 Gene3D G3DSA:1.10.10.10 245 325 9.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3315 506580a629dce9941525a7797312cce5 335 Gene3D G3DSA:1.10.601.10 8 164 1.2E-48 T 14-10-2018 VAB027_3315 506580a629dce9941525a7797312cce5 335 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 51 329 1.4E-138 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAB027_3315 506580a629dce9941525a7797312cce5 335 Pfam PF04542 Sigma-70 region 2 95 164 7.0E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 Pfam PF04545 Sigma-70, region 4 263 316 1.3E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 288 314 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 Pfam PF04539 Sigma-70 region 3 175 248 8.4E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 SUPERFAMILY SSF88946 57 165 5.89E-46 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 Gene3D G3DSA:1.10.10.10 168 243 2.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3315 506580a629dce9941525a7797312cce5 335 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 318 5.4E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_3315 506580a629dce9941525a7797312cce5 335 SUPERFAMILY SSF88659 225 324 1.1E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 SUPERFAMILY SSF53300 88 257 2.63E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 Pfam PF14559 Tetratricopeptide repeat 378 433 1.8E-6 T 14-10-2018 VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 Gene3D G3DSA:3.40.50.410 82 280 2.9E-31 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 Pfam PF13519 von Willebrand factor type A domain 88 194 1.2E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 SMART SM00028 397 430 2.7E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 SUPERFAMILY SSF48452 348 445 1.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_867 b43c7897fc7739497fbae370a2be2dd4 618 Gene3D G3DSA:1.25.40.10 370 478 4.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_931 50866b34d6351e896f342272aa470e92 435 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 412 47.852 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VAB027_931 50866b34d6351e896f342272aa470e92 435 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 177 410 1.5E-84 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VAB027_931 50866b34d6351e896f342272aa470e92 435 Gene3D G3DSA:3.20.140.10 1 426 1.6E-178 T 14-10-2018 VAB027_931 50866b34d6351e896f342272aa470e92 435 PIRSF PIRSF000484 1 399 1.6E-63 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VAB027_931 50866b34d6351e896f342272aa470e92 435 SUPERFAMILY SSF51690 128 410 4.32E-86 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VAB027_931 50866b34d6351e896f342272aa470e92 435 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 2.9E-187 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VAB027_931 50866b34d6351e896f342272aa470e92 435 SUPERFAMILY SSF54675 7 146 1.15E-34 T 14-10-2018 VAB027_2186 3bbef413e23a6a91a793184da6130af1 392 SUPERFAMILY SSF48452 32 232 2.98E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2186 3bbef413e23a6a91a793184da6130af1 392 SUPERFAMILY SSF48452 262 389 2.11E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2186 3bbef413e23a6a91a793184da6130af1 392 Gene3D G3DSA:1.25.40.10 184 391 5.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2186 3bbef413e23a6a91a793184da6130af1 392 Gene3D G3DSA:1.25.40.10 28 183 2.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88659 92 162 5.23E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 PIRSF PIRSF000770 3 242 4.5E-36 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 61.592 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 2.9E-82 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 1.5E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88659 163 240 5.61E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04539 Sigma-70 region 3 100 172 3.9E-14 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88946 6 91 1.83E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.20.140.160 90 239 1.0E-43 T 14-10-2018 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04545 Sigma-70, region 4 187 234 3.2E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04542 Sigma-70 region 2 20 91 3.7E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.10.1740.10 4 88 3.5E-26 T 14-10-2018 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 7.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 7.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 7.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_2704 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 7.3E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAB027_3506 ed96de0df5511aaffdaea35a7b184515 319 SUPERFAMILY SSF64182 5 318 9.42E-41 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VAB027_922 fa5c5e181f880090e8a6ca5424ec68b8 168 PIRSF PIRSF028301 1 168 6.3E-62 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAB027_922 fa5c5e181f880090e8a6ca5424ec68b8 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 7.9E-57 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAB027_922 fa5c5e181f880090e8a6ca5424ec68b8 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 2.1E-58 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.703 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 SUPERFAMILY SSF50447 15 102 1.24E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 SUPERFAMILY SSF50346 108 182 1.86E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 3.5E-56 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 Pfam PF05239 PRC-barrel domain 105 179 1.4E-12 T 14-10-2018 IPR027275 PRC-barrel domain VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 Gene3D G3DSA:2.40.30.60 6 102 1.2E-32 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 Gene3D G3DSA:2.30.30.240 103 184 3.4E-31 T 14-10-2018 VAB027_3280 c207da93b6c307a75cd45ef705cbf270 184 Pfam PF01782 RimM N-terminal domain 17 97 7.2E-26 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 VAB027_2360 9b701f6a9289a8879dff4f4577736a47 240 Gene3D G3DSA:1.10.10.2250 1 78 5.9E-37 T 14-10-2018 VAB027_2360 9b701f6a9289a8879dff4f4577736a47 240 Pfam PF04288 MukE-like family 10 234 5.8E-118 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VAB027_2360 9b701f6a9289a8879dff4f4577736a47 240 Gene3D G3DSA:1.10.10.2260 88 195 7.8E-50 T 14-10-2018 VAB027_2360 9b701f6a9289a8879dff4f4577736a47 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 239 48.682 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VAB027_1392 ad7cdc481749b637792029cf66591090 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 2.0E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1392 ad7cdc481749b637792029cf66591090 301 SUPERFAMILY SSF53850 96 300 1.94E-36 T 14-10-2018 VAB027_1392 ad7cdc481749b637792029cf66591090 301 Pfam PF03466 LysR substrate binding domain 96 299 6.4E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1392 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:3.40.190.10 168 269 1.7E-55 T 14-10-2018 VAB027_1392 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:3.40.190.10 98 297 1.7E-55 T 14-10-2018 VAB027_1392 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:1.10.10.10 2 89 3.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1392 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1392 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1392 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1392 ad7cdc481749b637792029cf66591090 301 SUPERFAMILY SSF46785 4 117 2.62E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2038 368488b0f7b52fe84c5b6e5ae048a589 342 SUPERFAMILY SSF53850 29 261 2.94E-49 T 14-10-2018 VAB027_2038 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 125 230 8.1E-51 T 14-10-2018 VAB027_2038 368488b0f7b52fe84c5b6e5ae048a589 342 SMART SM00062 38 267 1.7E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2038 368488b0f7b52fe84c5b6e5ae048a589 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 6.0E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2038 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 33 244 8.1E-51 T 14-10-2018 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 Pfam PF02421 Ferrous iron transport protein B 4 161 2.1E-57 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 3.2E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 3.2E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.2E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 688 4.2E-179 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 Pfam PF07670 Nucleoside recognition 349 440 1.7E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 Pfam PF07670 Nucleoside recognition 509 691 1.9E-36 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 SUPERFAMILY SSF52540 4 173 9.25E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 1.7E-19 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VAB027_2714 fb78e0e1c090a9de387eece0b5cebfc0 758 Gene3D G3DSA:3.40.50.300 3 180 1.3E-42 T 14-10-2018 VAB027_1713 cbf9373c942e40f8a276435b53f2e467 138 SMART SM00116 80 127 7.8E-7 T 14-10-2018 IPR000644 CBS domain VAB027_1713 cbf9373c942e40f8a276435b53f2e467 138 SMART SM00116 13 61 0.0071 T 14-10-2018 IPR000644 CBS domain VAB027_1713 cbf9373c942e40f8a276435b53f2e467 138 SUPERFAMILY SSF54631 1 126 3.28E-31 T 14-10-2018 VAB027_1713 cbf9373c942e40f8a276435b53f2e467 138 Gene3D G3DSA:3.10.580.10 1 135 8.7E-29 T 14-10-2018 VAB027_1713 cbf9373c942e40f8a276435b53f2e467 138 Pfam PF00571 CBS domain 6 61 7.8E-7 T 14-10-2018 IPR000644 CBS domain VAB027_1713 cbf9373c942e40f8a276435b53f2e467 138 Pfam PF00571 CBS domain 73 127 8.5E-12 T 14-10-2018 IPR000644 CBS domain VAB027_1841 973738fad7ab0b8829e89a2944963f0c 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 1.3E-54 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VAB027_1841 973738fad7ab0b8829e89a2944963f0c 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 1.9E-107 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 SMART SM00345 6 65 9.6E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 Gene3D G3DSA:1.10.10.10 2 69 4.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 Pfam PF07702 UTRA domain 86 224 1.5E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 SMART SM00866 86 225 1.1E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 2.0E-111 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 SUPERFAMILY SSF64288 53 229 1.07E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 Gene3D G3DSA:3.40.1410.10 70 228 1.1E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 SUPERFAMILY SSF46785 3 69 9.58E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_565 c693b1a450fcc6a7aab469156ceb8f7d 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.2E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAB027_2085 ba89f55f1b234e9b16cf05abb684a19e 511 SUPERFAMILY SSF103473 8 503 7.85E-60 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2085 ba89f55f1b234e9b16cf05abb684a19e 511 Gene3D G3DSA:1.20.1720.10 21 225 1.6E-40 T 14-10-2018 VAB027_2085 ba89f55f1b234e9b16cf05abb684a19e 511 Gene3D G3DSA:1.20.1250.20 275 508 1.0E-13 T 14-10-2018 VAB027_2085 ba89f55f1b234e9b16cf05abb684a19e 511 Pfam PF07690 Major Facilitator Superfamily 25 417 8.1E-52 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_2085 ba89f55f1b234e9b16cf05abb684a19e 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 498 6.6E-131 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 VAB027_1666 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1666 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1666 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1666 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1666 74162124a577e33b1992b1100b8a8466 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_1666 74162124a577e33b1992b1100b8a8466 275 SUPERFAMILY SSF51735 3 270 2.6E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1666 74162124a577e33b1992b1100b8a8466 275 Pfam PF00106 short chain dehydrogenase 3 187 2.8E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1666 74162124a577e33b1992b1100b8a8466 275 Gene3D G3DSA:3.40.50.720 2 262 2.3E-59 T 14-10-2018 VAB027_225 a62196109cc4743d1290e8e142408c84 257 SUPERFAMILY SSF51351 2 251 1.96E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_225 a62196109cc4743d1290e8e142408c84 257 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 3.2E-79 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_225 a62196109cc4743d1290e8e142408c84 257 Gene3D G3DSA:3.20.20.70 1 256 4.3E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_225 a62196109cc4743d1290e8e142408c84 257 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.472 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_225 a62196109cc4743d1290e8e142408c84 257 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_225 a62196109cc4743d1290e8e142408c84 257 Pfam PF00121 Triosephosphate isomerase 5 247 1.7E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_470 e163141a680dd764612ed8eebb35cb48 459 Gene3D G3DSA:1.20.1250.20 242 443 1.1E-34 T 14-10-2018 VAB027_470 e163141a680dd764612ed8eebb35cb48 459 PIRSF PIRSF002808 12 451 7.5E-104 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAB027_470 e163141a680dd764612ed8eebb35cb48 459 Pfam PF07690 Major Facilitator Superfamily 36 392 1.7E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_470 e163141a680dd764612ed8eebb35cb48 459 SUPERFAMILY SSF103473 18 441 7.32E-64 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_470 e163141a680dd764612ed8eebb35cb48 459 Gene3D G3DSA:1.20.1250.20 21 219 2.3E-38 T 14-10-2018 VAB027_1532 f75217248b934540b47f55e3e556762f 306 Gene3D G3DSA:3.40.190.10 163 261 1.9E-59 T 14-10-2018 VAB027_1532 f75217248b934540b47f55e3e556762f 306 SUPERFAMILY SSF46785 3 85 2.62E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1532 f75217248b934540b47f55e3e556762f 306 Gene3D G3DSA:3.40.190.10 103 288 1.9E-59 T 14-10-2018 VAB027_1532 f75217248b934540b47f55e3e556762f 306 SUPERFAMILY SSF53850 92 297 9.23E-38 T 14-10-2018 VAB027_1532 f75217248b934540b47f55e3e556762f 306 Pfam PF03466 LysR substrate binding domain 91 291 2.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1532 f75217248b934540b47f55e3e556762f 306 Gene3D G3DSA:1.10.10.10 7 95 3.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1532 f75217248b934540b47f55e3e556762f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.0E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1532 f75217248b934540b47f55e3e556762f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1532 f75217248b934540b47f55e3e556762f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1532 f75217248b934540b47f55e3e556762f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 Gene3D G3DSA:3.20.20.70 84 293 1.4E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 Pfam PF04055 Radical SAM superfamily 91 252 2.2E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 SMART SM00729 84 293 1.0E-18 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.467 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 SUPERFAMILY SSF102114 52 316 5.62E-69 T 14-10-2018 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.8E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.1E-149 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_1634 bcd0c59fb478e7bc49d3aa694719feb5 321 PIRSF PIRSF005963 2 320 6.2E-130 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 PRINTS PR00625 DnaJ domain signature 238 253 3.8E-12 T 14-10-2018 IPR001623 DnaJ domain VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 PRINTS PR00625 DnaJ domain signature 262 282 3.8E-12 T 14-10-2018 IPR001623 DnaJ domain VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 PRINTS PR00625 DnaJ domain signature 220 238 3.8E-12 T 14-10-2018 IPR001623 DnaJ domain VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 Gene3D G3DSA:1.10.287.110 195 282 2.0E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 Gene3D G3DSA:1.10.3680.10 38 190 4.5E-24 T 14-10-2018 IPR029024 TerB-like VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 SUPERFAMILY SSF158682 48 181 5.75E-22 T 14-10-2018 IPR029024 TerB-like VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 Pfam PF05099 Tellurite resistance protein TerB 45 177 4.3E-17 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 SUPERFAMILY SSF46565 138 280 2.41E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 Pfam PF00226 DnaJ domain 218 280 3.7E-14 T 14-10-2018 IPR001623 DnaJ domain VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.808 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VAB027_3384 349fbf13aa73f01ee3a33be421504d0f 284 SMART SM00271 217 282 2.5E-21 T 14-10-2018 IPR001623 DnaJ domain VAB027_492 a6d23e3935862a3af0afa5165b4a4dbf 106 Pfam PF03927 NapD protein 11 85 1.6E-27 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VAB027_492 a6d23e3935862a3af0afa5165b4a4dbf 106 Gene3D G3DSA:3.30.70.920 11 80 1.1E-20 T 14-10-2018 VAB027_492 a6d23e3935862a3af0afa5165b4a4dbf 106 Hamap MF_02200 Chaperone NapD [napD]. 11 87 18.548 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 5.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 5.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 5.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 5.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 5.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 5.4E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 2.3E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 2.3E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 2.3E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 2.3E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 2.3E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 2.3E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 Pfam PF00813 FliP family 102 293 3.5E-79 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAB027_2755 a5ee83c90d9bf1dfb805e05cdfbd4f8a 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 1.8E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 486 49.01 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 SUPERFAMILY SSF53850 44 278 2.31E-36 T 14-10-2018 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 2.1E-32 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 Gene3D G3DSA:1.10.530.10 283 461 1.1E-36 T 14-10-2018 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 Gene3D G3DSA:3.40.190.10 128 235 7.6E-72 T 14-10-2018 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 Gene3D G3DSA:3.40.190.10 37 274 7.6E-72 T 14-10-2018 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 SMART SM00062 43 279 7.4E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 Pfam PF01464 Transglycosylase SLT domain 310 412 4.7E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VAB027_1508 da087e2a251724672db9ba9fea4f0d2a 530 SUPERFAMILY SSF53955 257 461 8.44E-39 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.7E-42 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 26.088 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 Pfam PF00226 DnaJ domain 3 70 1.7E-6 T 14-10-2018 IPR001623 DnaJ domain VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 Gene3D G3DSA:1.20.1280.20 80 171 3.6E-30 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 SMART SM00271 1 66 2.6E-9 T 14-10-2018 IPR001623 DnaJ domain VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 SUPERFAMILY SSF46565 1 74 3.4E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 Gene3D G3DSA:1.10.287.110 1 79 2.3E-23 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 SUPERFAMILY SSF47144 78 170 3.4E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_1407 9da6beb4c3369124d62370081c110ea3 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 4.5E-19 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_1918 bf06ecac4b8a26aa21f87528ad1ff48d 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 2.2E-62 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VAB027_1918 bf06ecac4b8a26aa21f87528ad1ff48d 179 SUPERFAMILY SSF52540 4 177 1.03E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1918 bf06ecac4b8a26aa21f87528ad1ff48d 179 PIRSF PIRSF006135 2 179 4.0E-59 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VAB027_1918 bf06ecac4b8a26aa21f87528ad1ff48d 179 Gene3D G3DSA:3.40.50.300 3 177 1.4E-60 T 14-10-2018 VAB027_2756 f544c47a53a42d0a0422bea93098151a 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 7.3E-23 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VAB027_2756 f544c47a53a42d0a0422bea93098151a 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 4.3E-19 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 SUPERFAMILY SSF48557 4 449 3.3E-109 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 7.2E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.2E-51 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 14-10-2018 IPR000362 Fumarate lyase family VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 Gene3D G3DSA:1.20.200.10 118 447 2.4E-158 T 14-10-2018 VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 Pfam PF00206 Lyase 14 313 8.5E-73 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 Gene3D G3DSA:1.10.275.10 1 117 2.3E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VAB027_1807 e53d346db1ff3132ee83245b651cafd6 456 Gene3D G3DSA:1.10.40.30 383 446 2.4E-158 T 14-10-2018 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 Pfam PF00312 Ribosomal protein S15 8 88 7.5E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 SMART SM01387 8 88 8.8E-51 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 SUPERFAMILY SSF47060 3 89 3.24E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-40 T 14-10-2018 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 Gene3D G3DSA:1.10.287.10 2 89 6.5E-35 T 14-10-2018 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.395 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3200 75a43922776523ba1ff22f734efbf21e 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.5E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2896 747927490c730701cc174f2f4c0b4bdc 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VAB027_2896 747927490c730701cc174f2f4c0b4bdc 280 Pfam PF01148 Cytidylyltransferase family 2 280 2.0E-73 T 14-10-2018 VAB027_1891 d13920fd87045f12e39d08283d19dc3c 699 Pfam PF02378 Phosphotransferase system, EIIC 31 333 1.7E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_1891 d13920fd87045f12e39d08283d19dc3c 699 Gene3D G3DSA:3.20.20.450 443 698 6.9E-68 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1891 d13920fd87045f12e39d08283d19dc3c 699 SMART SM00052 440 680 1.1E-65 T 14-10-2018 IPR001633 EAL domain VAB027_1891 d13920fd87045f12e39d08283d19dc3c 699 Pfam PF00563 EAL domain 447 674 1.3E-61 T 14-10-2018 IPR001633 EAL domain VAB027_1891 d13920fd87045f12e39d08283d19dc3c 699 SUPERFAMILY SSF141868 449 689 8.24E-63 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1366 87e31c784fae703864b3e292740562af 158 Pfam PF06271 RDD family 9 148 2.3E-21 T 14-10-2018 IPR010432 RDD VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 PIRSF PIRSF001267 1 500 1.7E-203 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 Gene3D G3DSA:1.10.3210.10 308 500 8.3E-58 T 14-10-2018 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 304 2.2E-104 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 Gene3D G3DSA:3.30.420.150 115 293 1.2E-92 T 14-10-2018 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 Pfam PF02541 Ppx/GppA phosphatase family 24 306 4.4E-85 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 SUPERFAMILY SSF53067 135 307 4.53E-47 T 14-10-2018 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 SUPERFAMILY SSF53067 11 131 1.41E-36 T 14-10-2018 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 SUPERFAMILY SSF109604 311 499 6.91E-48 T 14-10-2018 VAB027_1383 254a1737224818f0c65036d04e1c4f75 500 Gene3D G3DSA:3.30.420.40 12 301 1.2E-92 T 14-10-2018 VAB027_24 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:3.30.200.70 13 108 1.5E-123 T 14-10-2018 VAB027_24 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:1.10.510.10 60 258 1.5E-123 T 14-10-2018 VAB027_24 bd8f41471802bac43e685c56cb0cb1f2 328 SUPERFAMILY SSF56112 6 328 3.35E-90 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_24 bd8f41471802bac43e685c56cb0cb1f2 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 47.158 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VAB027_24 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:1.20.1270.170 149 307 1.5E-123 T 14-10-2018 VAB027_24 bd8f41471802bac43e685c56cb0cb1f2 328 Pfam PF01636 Phosphotransferase enzyme family 35 262 5.3E-42 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VAB027_214 0004434239f7bfb3ba0c30e9365687ba 105 Gene3D G3DSA:1.10.140.10 2 105 3.2E-56 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VAB027_214 0004434239f7bfb3ba0c30e9365687ba 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 4.7E-59 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VAB027_214 0004434239f7bfb3ba0c30e9365687ba 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.123 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VAB027_214 0004434239f7bfb3ba0c30e9365687ba 105 SUPERFAMILY SSF47598 3 104 2.89E-56 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAB027_214 0004434239f7bfb3ba0c30e9365687ba 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VAB027_2610 ba6ab4b5f270bc6d7ff8a40344d8f51d 263 SUPERFAMILY SSF53474 11 260 2.7E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2610 ba6ab4b5f270bc6d7ff8a40344d8f51d 263 Pfam PF12697 Alpha/beta hydrolase family 18 252 3.1E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2610 ba6ab4b5f270bc6d7ff8a40344d8f51d 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 8 259 34.13 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VAB027_2610 ba6ab4b5f270bc6d7ff8a40344d8f51d 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 259 1.2E-83 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VAB027_2610 ba6ab4b5f270bc6d7ff8a40344d8f51d 263 Gene3D G3DSA:3.40.50.1820 1 263 4.0E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_1439 90953a02e71e2f101dea76f9d4e9ca27 325 SUPERFAMILY SSF141571 52 140 3.27E-14 T 14-10-2018 VAB027_1439 90953a02e71e2f101dea76f9d4e9ca27 325 Gene3D G3DSA:2.160.20.100 44 176 4.1E-16 T 14-10-2018 VAB027_1439 90953a02e71e2f101dea76f9d4e9ca27 325 Gene3D G3DSA:1.10.287.70 228 325 1.4E-16 T 14-10-2018 VAB027_1439 90953a02e71e2f101dea76f9d4e9ca27 325 SUPERFAMILY SSF81324 199 325 2.75E-17 T 14-10-2018 VAB027_1439 90953a02e71e2f101dea76f9d4e9ca27 325 Pfam PF13599 Pentapeptide repeats (9 copies) 84 142 1.1E-6 T 14-10-2018 IPR001646 Pentapeptide repeat VAB027_1439 90953a02e71e2f101dea76f9d4e9ca27 325 Pfam PF07885 Ion channel 237 324 8.8E-17 T 14-10-2018 IPR013099 Potassium channel domain VAB027_56 1e1539ef26cbfaaec1068dcff03a2fe7 68 Pfam PF02597 ThiS family 15 68 2.8E-12 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VAB027_56 1e1539ef26cbfaaec1068dcff03a2fe7 68 Gene3D G3DSA:3.10.20.30 3 68 3.8E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_56 1e1539ef26cbfaaec1068dcff03a2fe7 68 SUPERFAMILY SSF54285 3 68 8.58E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VAB027_56 1e1539ef26cbfaaec1068dcff03a2fe7 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 1.3E-15 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis VAB027_1202 72ecff05953b98589792081e926cd2b3 259 SMART SM00382 30 219 4.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1202 72ecff05953b98589792081e926cd2b3 259 SUPERFAMILY SSF52540 10 224 1.74E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1202 72ecff05953b98589792081e926cd2b3 259 Gene3D G3DSA:3.40.50.300 2 258 1.2E-62 T 14-10-2018 VAB027_1202 72ecff05953b98589792081e926cd2b3 259 Pfam PF00005 ABC transporter 21 170 4.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2090 6427a8f3d5dec9ad8ac31d3358a43667 262 Pfam PF13503 Domain of unknown function (DUF4123) 14 125 9.5E-19 T 14-10-2018 IPR025391 Domain of unknown function DUF4123 VAB027_1992 7bb4eba85a7079fe2c33a9c53bdd6ff8 158 Gene3D G3DSA:3.40.50.2300 1 137 2.8E-20 T 14-10-2018 VAB027_1992 7bb4eba85a7079fe2c33a9c53bdd6ff8 158 SUPERFAMILY SSF52172 1 133 4.7E-22 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1992 7bb4eba85a7079fe2c33a9c53bdd6ff8 158 Pfam PF00072 Response regulator receiver domain 6 125 5.6E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1992 7bb4eba85a7079fe2c33a9c53bdd6ff8 158 SMART SM00448 4 125 1.5E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2332 bb435a6eba44e197ade9fe3b25094a5e 262 Gene3D G3DSA:3.40.50.300 1 261 1.6E-69 T 14-10-2018 VAB027_2332 bb435a6eba44e197ade9fe3b25094a5e 262 Pfam PF00005 ABC transporter 30 178 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2332 bb435a6eba44e197ade9fe3b25094a5e 262 SMART SM00382 38 227 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2332 bb435a6eba44e197ade9fe3b25094a5e 262 SUPERFAMILY SSF52540 4 252 8.57E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1349 d0918ca251a9a70ba9b5411f10af65cf 84 Gene3D G3DSA:3.30.300.90 1 84 1.7E-31 T 14-10-2018 VAB027_1349 d0918ca251a9a70ba9b5411f10af65cf 84 Pfam PF01722 BolA-like protein 20 74 5.0E-12 T 14-10-2018 IPR002634 BolA protein VAB027_1349 d0918ca251a9a70ba9b5411f10af65cf 84 SUPERFAMILY SSF82657 4 82 7.98E-28 T 14-10-2018 IPR036065 BolA-like superfamily VAB027_1349 d0918ca251a9a70ba9b5411f10af65cf 84 PIRSF PIRSF003113 1 83 8.6E-21 T 14-10-2018 IPR002634 BolA protein VAB027_2169 1512d045c097f75ead5aa426a42678bc 271 Gene3D G3DSA:3.40.190.10 105 217 2.8E-97 T 14-10-2018 VAB027_2169 1512d045c097f75ead5aa426a42678bc 271 Pfam PF12849 PBP superfamily domain 23 246 2.1E-30 T 14-10-2018 IPR024370 PBP domain VAB027_2169 1512d045c097f75ead5aa426a42678bc 271 Gene3D G3DSA:3.40.190.10 30 254 2.8E-97 T 14-10-2018 VAB027_2169 1512d045c097f75ead5aa426a42678bc 271 SUPERFAMILY SSF53850 27 256 4.66E-32 T 14-10-2018 VAB027_955 b3ca33ef42c86f391ad1c3e67d2b196b 306 Gene3D G3DSA:1.10.3720.10 79 305 2.5E-32 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_955 b3ca33ef42c86f391ad1c3e67d2b196b 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 301 5.8E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_955 b3ca33ef42c86f391ad1c3e67d2b196b 306 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 303 2.1E-92 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VAB027_955 b3ca33ef42c86f391ad1c3e67d2b196b 306 SUPERFAMILY SSF161098 31 300 4.06E-35 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 Gene3D G3DSA:1.10.10.10 3 88 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 SUPERFAMILY SSF46785 5 87 9.58E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 SMART SM00418 5 83 4.2E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1752 4fd4ee858c4bd6146aefedf1b1e3be24 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAB027_1180 5ff710cfac126ffd00b7e29b1142a2cc 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 7.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1180 5ff710cfac126ffd00b7e29b1142a2cc 296 Gene3D G3DSA:1.10.3720.10 1 283 1.5E-74 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1180 5ff710cfac126ffd00b7e29b1142a2cc 296 SUPERFAMILY SSF161098 10 296 4.32E-69 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_610 a2ad0ce18b8b27444214b85a22c7d3ae 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 784 9.7E-293 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase VAB027_3490 a7fe48072cdeac46ee745c127f50ab41 369 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 9.4E-20 T 14-10-2018 VAB027_3490 a7fe48072cdeac46ee745c127f50ab41 369 SUPERFAMILY SSF54862 165 310 5.02E-19 T 14-10-2018 VAB027_3490 a7fe48072cdeac46ee745c127f50ab41 369 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.9E-23 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VAB027_3490 a7fe48072cdeac46ee745c127f50ab41 369 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_3490 a7fe48072cdeac46ee745c127f50ab41 369 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.999 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VAB027_3490 a7fe48072cdeac46ee745c127f50ab41 369 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 7.8E-152 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VAB027_711 53cd027dcb6794c1f85e026eaeefcb4d 319 SUPERFAMILY SSF53098 171 318 4.1E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_711 53cd027dcb6794c1f85e026eaeefcb4d 319 SUPERFAMILY SSF46689 2 119 1.42E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_711 53cd027dcb6794c1f85e026eaeefcb4d 319 ProSitePatterns PS01043 Transposases, IS30 family, signature. 262 278 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VAB027_711 53cd027dcb6794c1f85e026eaeefcb4d 319 Pfam PF13936 Helix-turn-helix domain 3 45 3.2E-14 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VAB027_711 53cd027dcb6794c1f85e026eaeefcb4d 319 Pfam PF00665 Integrase core domain 171 275 9.9E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAB027_711 53cd027dcb6794c1f85e026eaeefcb4d 319 Gene3D G3DSA:3.30.420.10 162 319 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_759 a4b4ebb99689271d4e2bb248eab2e385 137 SUPERFAMILY SSF54593 9 134 2.01E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_759 a4b4ebb99689271d4e2bb248eab2e385 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 1.5E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_759 a4b4ebb99689271d4e2bb248eab2e385 137 Gene3D G3DSA:3.10.180.10 1 131 2.2E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_3110 93f11a7e4f338e61c8af19be175c626f 362 Pfam PF13528 Glycosyl transferase family 1 2 295 8.4E-37 T 14-10-2018 VAB027_3110 93f11a7e4f338e61c8af19be175c626f 362 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 2.5E-147 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 VAB027_3110 93f11a7e4f338e61c8af19be175c626f 362 Gene3D G3DSA:3.40.50.2000 181 308 1.9E-6 T 14-10-2018 VAB027_3110 93f11a7e4f338e61c8af19be175c626f 362 SUPERFAMILY SSF53756 11 305 3.45E-13 T 14-10-2018 VAB027_389 9d99da8a0e7d5a7b73920113ef7b480a 209 Gene3D G3DSA:1.10.287.110 154 208 3.1E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_389 9d99da8a0e7d5a7b73920113ef7b480a 209 Pfam PF00226 DnaJ domain 160 206 1.8E-10 T 14-10-2018 IPR001623 DnaJ domain VAB027_389 9d99da8a0e7d5a7b73920113ef7b480a 209 SUPERFAMILY SSF46565 122 206 4.84E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VAB027_389 9d99da8a0e7d5a7b73920113ef7b480a 209 Pfam PF12339 DNA-J related protein 17 138 4.6E-41 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal VAB027_389 9d99da8a0e7d5a7b73920113ef7b480a 209 SMART SM00271 153 208 7.5E-9 T 14-10-2018 IPR001623 DnaJ domain VAB027_782 f60bfc320dffef70f3039db8b36af670 375 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 266 356 7.1E-25 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 SMART SM00936 266 356 8.2E-32 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 Gene3D G3DSA:3.40.710.10 9 264 4.5E-88 T 14-10-2018 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 16 246 2.7E-86 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 Gene3D G3DSA:2.60.410.10 266 356 7.9E-26 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 49 60 5.2E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 132 145 5.2E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 105 122 5.2E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAB027_782 f60bfc320dffef70f3039db8b36af670 375 SUPERFAMILY SSF56601 3 266 3.58E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_782 f60bfc320dffef70f3039db8b36af670 375 SUPERFAMILY SSF69189 266 358 2.16E-23 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAB027_3188 99cfb88b97ba9e673e5ecc1d8c480991 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 144 8.3E-39 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VAB027_3188 99cfb88b97ba9e673e5ecc1d8c480991 149 Gene3D G3DSA:3.40.630.30 5 148 2.9E-39 T 14-10-2018 VAB027_3188 99cfb88b97ba9e673e5ecc1d8c480991 149 SUPERFAMILY SSF55729 1 146 7.03E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3188 99cfb88b97ba9e673e5ecc1d8c480991 149 Pfam PF00583 Acetyltransferase (GNAT) family 25 121 2.5E-14 T 14-10-2018 IPR000182 GNAT domain VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 Pfam PF00717 Peptidase S24-like 161 226 1.5E-12 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 SMART SM00530 30 83 3.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 Gene3D G3DSA:2.10.109.10 119 245 6.8E-16 T 14-10-2018 VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 SUPERFAMILY SSF47413 37 85 1.52E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 SUPERFAMILY SSF51306 111 242 2.35E-27 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 Pfam PF01381 Helix-turn-helix 35 83 2.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1554 10c416ec3831e24cc52f81fd17385eb6 247 Gene3D G3DSA:1.10.260.40 24 91 7.8E-12 T 14-10-2018 VAB027_1944 d6707d4efb04160015888afe3a8a11ff 523 Pfam PF01471 Putative peptidoglycan binding domain 225 264 4.0E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like VAB027_1944 d6707d4efb04160015888afe3a8a11ff 523 SUPERFAMILY SSF141523 289 450 4.97E-19 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAB027_1944 d6707d4efb04160015888afe3a8a11ff 523 Gene3D G3DSA:2.40.440.10 234 496 7.8E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAB027_1944 d6707d4efb04160015888afe3a8a11ff 523 Pfam PF03734 L,D-transpeptidase catalytic domain 292 460 6.0E-30 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VAB027_1944 d6707d4efb04160015888afe3a8a11ff 523 SUPERFAMILY SSF47090 198 272 3.69E-12 T 14-10-2018 IPR036365 PGBD-like superfamily VAB027_3310 894dd481385e218e2e50dfcb511f1bdf 283 SUPERFAMILY SSF161098 22 272 2.24E-54 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3310 894dd481385e218e2e50dfcb511f1bdf 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 280 5.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3310 894dd481385e218e2e50dfcb511f1bdf 283 Gene3D G3DSA:1.10.3720.10 19 277 1.4E-66 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3310 894dd481385e218e2e50dfcb511f1bdf 283 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 278 2.0E-124 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 VAB027_3310 894dd481385e218e2e50dfcb511f1bdf 283 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 273 4.8E-102 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VAB027_2211 427b8549d5293699e58c001e57c5ee3f 445 PIRSF PIRSF006446 1 444 6.6E-171 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAB027_2211 427b8549d5293699e58c001e57c5ee3f 445 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 429 2.1E-155 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAB027_1819 a71896c51924e0d2492765af7170cc26 257 Gene3D G3DSA:3.20.20.70 1 257 1.6E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1819 a71896c51924e0d2492765af7170cc26 257 Pfam PF00977 Histidine biosynthesis protein 5 239 6.7E-78 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VAB027_1819 a71896c51924e0d2492765af7170cc26 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 7.0E-115 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VAB027_1819 a71896c51924e0d2492765af7170cc26 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.614 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VAB027_1819 a71896c51924e0d2492765af7170cc26 257 SUPERFAMILY SSF51366 1 256 6.59E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_1859 399797d6d93c531002a42d32232ccd85 573 SUPERFAMILY SSF90123 7 322 4.32E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1859 399797d6d93c531002a42d32232ccd85 573 SUPERFAMILY SSF52540 333 571 4.11E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1859 399797d6d93c531002a42d32232ccd85 573 Gene3D G3DSA:3.40.50.300 326 573 5.2E-76 T 14-10-2018 VAB027_1859 399797d6d93c531002a42d32232ccd85 573 SMART SM00382 365 555 6.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1859 399797d6d93c531002a42d32232ccd85 573 Pfam PF00005 ABC transporter 357 502 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1859 399797d6d93c531002a42d32232ccd85 573 Gene3D G3DSA:1.20.1560.10 1 320 4.5E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1859 399797d6d93c531002a42d32232ccd85 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1859 399797d6d93c531002a42d32232ccd85 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 2.6E-136 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VAB027_2172 8c212b68fab7757a0a1e16c42b4e6ce6 176 Gene3D G3DSA:3.90.550.10 1 173 1.3E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_2172 8c212b68fab7757a0a1e16c42b4e6ce6 176 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 1 169 4.4E-63 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VAB027_2172 8c212b68fab7757a0a1e16c42b4e6ce6 176 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 171 21.67 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VAB027_2172 8c212b68fab7757a0a1e16c42b4e6ce6 176 SUPERFAMILY SSF53448 2 168 2.17E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_2172 8c212b68fab7757a0a1e16c42b4e6ce6 176 Pfam PF12804 MobA-like NTP transferase domain 1 139 6.1E-28 T 14-10-2018 IPR025877 MobA-like NTP transferase VAB027_1163 090449294dec870256f3baac54e55e01 402 Pfam PF12060 Domain of unknown function (DUF3541) 63 285 3.8E-114 T 14-10-2018 IPR021928 Protein of unknown function DUF3541 VAB027_1067 0ac3bd372f7f2f738a2e71a928480cf6 480 Pfam PF00171 Aldehyde dehydrogenase family 7 450 1.2E-86 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_1067 0ac3bd372f7f2f738a2e71a928480cf6 480 PIRSF PIRSF036492 6 478 2.5E-154 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VAB027_1067 0ac3bd372f7f2f738a2e71a928480cf6 480 Gene3D G3DSA:3.40.605.10 34 450 2.2E-146 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_1067 0ac3bd372f7f2f738a2e71a928480cf6 480 Gene3D G3DSA:3.40.309.10 230 430 2.2E-146 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_1067 0ac3bd372f7f2f738a2e71a928480cf6 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAB027_1067 0ac3bd372f7f2f738a2e71a928480cf6 480 SUPERFAMILY SSF53720 12 451 1.83E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 SUPERFAMILY SSF50341 16 162 8.76E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 SUPERFAMILY SSF52172 180 310 5.69E-22 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 Pfam PF01584 CheW-like domain 21 160 3.0E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 SMART SM00448 184 305 1.7E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:3.40.50.2300 164 311 1.9E-21 T 14-10-2018 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 Pfam PF00072 Response regulator receiver domain 186 303 3.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 SMART SM00260 17 158 6.3E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:2.30.30.40 24 152 1.1E-27 T 14-10-2018 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:2.40.50.180 39 158 1.1E-27 T 14-10-2018 VAB027_2640 2ffc6f3781631b522ceb2b6a3125ebce 314 PIRSF PIRSF002867 1 312 1.4E-105 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VAB027_374 43cf9c900c5fca473688f19f3e435ad3 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 7.2E-65 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VAB027_374 43cf9c900c5fca473688f19f3e435ad3 516 Gene3D G3DSA:1.10.579.10 329 449 3.8E-54 T 14-10-2018 VAB027_374 43cf9c900c5fca473688f19f3e435ad3 516 Gene3D G3DSA:1.25.40.80 132 325 1.3E-96 T 14-10-2018 VAB027_374 43cf9c900c5fca473688f19f3e435ad3 516 SUPERFAMILY SSF48173 230 501 4.45E-65 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VAB027_374 43cf9c900c5fca473688f19f3e435ad3 516 Gene3D G3DSA:1.10.10.1710 450 515 2.2E-26 T 14-10-2018 VAB027_374 43cf9c900c5fca473688f19f3e435ad3 516 Gene3D G3DSA:3.40.50.620 8 231 1.3E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 SUPERFAMILY SSF56784 3 222 9.57E-60 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 34.908 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 Gene3D G3DSA:1.10.150.240 19 92 5.0E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 4.2E-38 T 14-10-2018 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 192 3.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 220 2.6E-59 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 190 7.7E-13 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 2.7E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAB027_266 4d48e3934365debe14ce8f76a59234c2 226 Gene3D G3DSA:3.40.50.1000 7 214 5.0E-64 T 14-10-2018 IPR023214 HAD superfamily VAB027_1920 1036fd563314b0839bd54f3cf1cd194b 342 Gene3D G3DSA:3.40.630.10 1 342 7.4E-122 T 14-10-2018 VAB027_1920 1036fd563314b0839bd54f3cf1cd194b 342 SUPERFAMILY SSF53187 9 329 6.95E-79 T 14-10-2018 VAB027_1920 1036fd563314b0839bd54f3cf1cd194b 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 133.596 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VAB027_1920 1036fd563314b0839bd54f3cf1cd194b 342 PIRSF PIRSF017020 4 336 1.5E-119 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VAB027_1920 1036fd563314b0839bd54f3cf1cd194b 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 1.9E-75 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 SUPERFAMILY SSF58104 206 514 1.44E-58 T 14-10-2018 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 Gene3D G3DSA:1.10.287.950 184 515 1.4E-60 T 14-10-2018 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 478 6.0E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 7.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 351 378 7.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1148 f312846c1072e34f1c2966d9201a4ee0 515 SMART SM00283 253 514 8.9E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1997 d1cc25e776d026c6bb60508bc4b5e367 1023 SUPERFAMILY SSF56601 735 1006 2.25E-25 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_1997 d1cc25e776d026c6bb60508bc4b5e367 1023 Gene3D G3DSA:3.40.710.10 800 1013 1.4E-13 T 14-10-2018 VAB027_1997 d1cc25e776d026c6bb60508bc4b5e367 1023 Pfam PF00912 Transglycosylase 142 339 1.9E-23 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1997 d1cc25e776d026c6bb60508bc4b5e367 1023 Gene3D G3DSA:1.10.3810.10 135 374 7.3E-6 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1997 d1cc25e776d026c6bb60508bc4b5e367 1023 SUPERFAMILY SSF53955 152 372 5.62E-9 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_1997 d1cc25e776d026c6bb60508bc4b5e367 1023 SUPERFAMILY SSF56601 565 628 7.99E-6 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 Gene3D G3DSA:3.40.50.150 2 308 5.8E-98 T 14-10-2018 VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 Pfam PF01189 16S rRNA methyltransferase RsmB/F 116 306 1.1E-48 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 473 63.221 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 SUPERFAMILY SSF53335 6 308 7.47E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.5E-29 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 1.1E-10 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 Gene3D G3DSA:2.30.130.90 309 473 5.8E-70 T 14-10-2018 VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VAB027_2149 720e42c0bd1a7dfe37457983f59ef4dc 473 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.9E-99 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF51735 1 268 4.22E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 Gene3D G3DSA:3.40.50.720 3 264 5.9E-104 T 14-10-2018 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.9E-42 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 Gene3D G3DSA:3.30.360.10 127 234 5.9E-104 T 14-10-2018 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.4E-43 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 PIRSF PIRSF000161 1 268 9.5E-91 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.903 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF55347 127 236 1.81E-37 T 14-10-2018 VAB027_3019 1439dc5df8f5b777df5e16bbcc525048 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 8.2E-102 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 SUPERFAMILY SSF51735 1 179 8.98E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 Gene3D G3DSA:3.30.360.10 151 315 1.0E-126 T 14-10-2018 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 Gene3D G3DSA:3.40.50.720 4 327 1.0E-126 T 14-10-2018 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 SMART SM00846 3 152 5.1E-70 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 PIRSF PIRSF000149 1 331 1.4E-116 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 4.1E-118 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 SUPERFAMILY SSF55347 152 314 4.46E-64 T 14-10-2018 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 100 4.3E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_1753 534ab9a589eb979d2568cb88ca0e2307 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.6E-59 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_2698 67f7d5a3c0de237823e82d38f0e5b220 338 Pfam PF01584 CheW-like domain 194 326 3.2E-14 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2698 67f7d5a3c0de237823e82d38f0e5b220 338 SUPERFAMILY SSF50341 192 326 1.7E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2698 67f7d5a3c0de237823e82d38f0e5b220 338 PIRSF PIRSF020479 4 338 8.7E-146 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VAB027_2698 67f7d5a3c0de237823e82d38f0e5b220 338 SMART SM00260 190 324 0.0014 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_425 6ef30b1a4cf588d1536f75a1ce84d174 262 SUPERFAMILY SSF53474 9 247 2.66E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_425 6ef30b1a4cf588d1536f75a1ce84d174 262 Pfam PF01764 Lipase (class 3) 60 204 1.6E-28 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VAB027_425 6ef30b1a4cf588d1536f75a1ce84d174 262 Gene3D G3DSA:3.40.50.1820 7 236 3.9E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_541 bf53a7fceae4d38ee990b005a63fc0ef 170 Pfam PF00588 SpoU rRNA Methylase family 7 140 9.1E-19 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAB027_541 bf53a7fceae4d38ee990b005a63fc0ef 170 Gene3D G3DSA:3.40.1280.10 7 150 1.7E-18 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_541 bf53a7fceae4d38ee990b005a63fc0ef 170 SUPERFAMILY SSF75217 6 144 5.76E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 SUPERFAMILY SSF46785 7 86 8.02E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 SUPERFAMILY SSF53850 93 298 3.26E-38 T 14-10-2018 VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 Gene3D G3DSA:1.10.10.10 6 94 1.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 Pfam PF03466 LysR substrate binding domain 92 294 4.2E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 Gene3D G3DSA:3.40.190.290 96 294 1.6E-59 T 14-10-2018 VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1072 e0244bdf589b030fcc7a06b9e425ad3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 SUPERFAMILY SSF51905 2 313 2.04E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 Gene3D G3DSA:3.50.50.60 10 312 4.0E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.4E-38 T 14-10-2018 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.4E-38 T 14-10-2018 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-38 T 14-10-2018 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.4E-38 T 14-10-2018 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.4E-38 T 14-10-2018 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.9E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 Gene3D G3DSA:3.50.50.60 118 244 4.0E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.2E-124 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VAB027_1861 be0b84b0257f86ab6fd69ddd2cb74531 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.6E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAB027_1580 b6da576c9b784431fca7ca604a29bfa3 96 SUPERFAMILY SSF46785 4 81 7.37E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.0E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 6.3E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.289 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 5.6E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 5.6E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 5.6E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 5.6E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 SUPERFAMILY SSF54686 3 133 8.24E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1280 261f20348a0cd4556c45cbbf13393d93 136 Gene3D G3DSA:3.90.1170.10 1 136 3.6E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1402 aa1ff9063d94f6abba939e1ed1b10f13 243 Gene3D G3DSA:1.10.8.590 173 243 1.6E-30 T 14-10-2018 VAB027_1402 aa1ff9063d94f6abba939e1ed1b10f13 243 SUPERFAMILY SSF75217 5 168 1.37E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_1402 aa1ff9063d94f6abba939e1ed1b10f13 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 8.4E-83 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VAB027_1402 aa1ff9063d94f6abba939e1ed1b10f13 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 6.3E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAB027_1402 aa1ff9063d94f6abba939e1ed1b10f13 243 PIRSF PIRSF004808 1 243 9.3E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VAB027_1402 aa1ff9063d94f6abba939e1ed1b10f13 243 Gene3D G3DSA:3.40.1280.10 1 164 1.9E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_592 9d7c1a219073b08c5a8706eda595f92a 103 Gene3D G3DSA:3.30.780.10 23 103 1.1E-32 T 14-10-2018 VAB027_592 9d7c1a219073b08c5a8706eda595f92a 103 Pfam PF01253 Translation initiation factor SUI1 27 95 7.8E-20 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VAB027_592 9d7c1a219073b08c5a8706eda595f92a 103 PIRSF PIRSF037511 1 103 7.5E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VAB027_592 9d7c1a219073b08c5a8706eda595f92a 103 SUPERFAMILY SSF55159 3 99 3.53E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VAB027_592 9d7c1a219073b08c5a8706eda595f92a 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 5.8E-41 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 6.1E-228 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.9E-61 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 Gene3D G3DSA:3.30.420.40 255 499 6.6E-93 T 14-10-2018 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.551 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 SUPERFAMILY SSF53067 5 256 3.79E-94 T 14-10-2018 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 PIRSF PIRSF000538 4 503 5.7E-175 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.5E-86 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 SUPERFAMILY SSF53067 255 497 2.75E-85 T 14-10-2018 VAB027_433 d148065ceace773f2603ba8a51bd084c 505 Gene3D G3DSA:3.30.420.40 2 254 4.2E-112 T 14-10-2018 VAB027_2180 01d5ff5d46527078be88cb0d41bf507d 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 6.1E-42 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VAB027_40 830d6aa1f983f2433407cf54f323657e 161 PIRSF PIRSF001338 1 161 1.4E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VAB027_40 830d6aa1f983f2433407cf54f323657e 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.63 T 14-10-2018 IPR033747 Class I PurE VAB027_40 830d6aa1f983f2433407cf54f323657e 161 SMART SM01001 1 152 5.5E-104 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VAB027_40 830d6aa1f983f2433407cf54f323657e 161 Pfam PF00731 AIR carboxylase 3 150 6.0E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VAB027_40 830d6aa1f983f2433407cf54f323657e 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 1.3E-68 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VAB027_40 830d6aa1f983f2433407cf54f323657e 161 SUPERFAMILY SSF52255 2 159 4.71E-67 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VAB027_40 830d6aa1f983f2433407cf54f323657e 161 Gene3D G3DSA:3.40.50.7700 1 161 2.8E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.4E-107 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 Gene3D G3DSA:1.10.240.10 191 304 1.5E-140 T 14-10-2018 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 SUPERFAMILY SSF52374 5 334 2.61E-91 T 14-10-2018 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.425 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 Gene3D G3DSA:3.40.50.620 5 333 1.5E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_267 d0e5889e7212055c0e29bbb56a12002d 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 3.1E-77 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 2.0E-137 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 322 353 60.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 106 138 5.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 280 312 26.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 242 274 25.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 63 94 5.6E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 192 223 490.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SMART SM00564 147 178 0.082 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 Gene3D G3DSA:2.130.10.10 18 386 1.4E-98 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 Pfam PF13360 PQQ-like domain 76 310 1.6E-53 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.733 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VAB027_1418 8bae80ebfbcc165d6432b229ce389f95 386 SUPERFAMILY SSF50998 37 375 3.14E-81 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VAB027_1005 931d9ecf96e5eb22f7c8cb4f74a8419c 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.0E-34 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VAB027_1005 931d9ecf96e5eb22f7c8cb4f74a8419c 172 SUPERFAMILY SSF141452 3 168 1.44E-40 T 14-10-2018 IPR036624 Hcp1-like superfamily VAB027_1005 931d9ecf96e5eb22f7c8cb4f74a8419c 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 7.4E-65 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VAB027_1005 931d9ecf96e5eb22f7c8cb4f74a8419c 172 Gene3D G3DSA:2.30.110.20 2 172 7.4E-69 T 14-10-2018 IPR036624 Hcp1-like superfamily VAB027_2088 931d9ecf96e5eb22f7c8cb4f74a8419c 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.0E-34 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VAB027_2088 931d9ecf96e5eb22f7c8cb4f74a8419c 172 SUPERFAMILY SSF141452 3 168 1.44E-40 T 14-10-2018 IPR036624 Hcp1-like superfamily VAB027_2088 931d9ecf96e5eb22f7c8cb4f74a8419c 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 7.4E-65 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VAB027_2088 931d9ecf96e5eb22f7c8cb4f74a8419c 172 Gene3D G3DSA:2.30.110.20 2 172 7.4E-69 T 14-10-2018 IPR036624 Hcp1-like superfamily VAB027_1221 19ab2b68050c6fad18e60bf2e3ae89fe 248 Gene3D G3DSA:3.20.20.140 3 247 4.5E-61 T 14-10-2018 VAB027_1221 19ab2b68050c6fad18e60bf2e3ae89fe 248 SUPERFAMILY SSF89550 5 243 4.84E-59 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VAB027_1221 19ab2b68050c6fad18e60bf2e3ae89fe 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.417 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VAB027_1221 19ab2b68050c6fad18e60bf2e3ae89fe 248 SMART SM00481 5 79 2.4E-8 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VAB027_957 814b8b801b54d673446995c603389958 547 SUPERFAMILY SSF58104 239 547 8.37E-70 T 14-10-2018 VAB027_957 814b8b801b54d673446995c603389958 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 512 1.5E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_957 814b8b801b54d673446995c603389958 547 SMART SM00304 218 270 1.9E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_957 814b8b801b54d673446995c603389958 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 7.9E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_957 814b8b801b54d673446995c603389958 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 7.9E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_957 814b8b801b54d673446995c603389958 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 7.9E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_957 814b8b801b54d673446995c603389958 547 Gene3D G3DSA:1.10.287.950 218 547 7.9E-71 T 14-10-2018 VAB027_957 814b8b801b54d673446995c603389958 547 SMART SM00283 285 546 2.3E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_957 814b8b801b54d673446995c603389958 547 Pfam PF00672 HAMP domain 220 267 6.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_275 ef3cbe8691525ab9b09bec7852cf87b4 263 SMART SM01150 3 262 5.5E-116 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VAB027_275 ef3cbe8691525ab9b09bec7852cf87b4 263 Gene3D G3DSA:3.10.180.50 2 239 2.8E-93 T 14-10-2018 VAB027_275 ef3cbe8691525ab9b09bec7852cf87b4 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 1.3E-28 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VAB027_275 ef3cbe8691525ab9b09bec7852cf87b4 263 Pfam PF07063 Domain of unknown function (DUF1338) 32 117 8.4E-20 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.40.50.720 14 312 1.2E-112 T 14-10-2018 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF55021 335 408 3.28E-18 T 14-10-2018 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.30.70.260 328 408 2.4E-33 T 14-10-2018 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.1E-38 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF52283 7 136 3.59E-49 T 14-10-2018 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF51735 108 295 4.21E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.40.50.720 109 297 1.2E-112 T 14-10-2018 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VAB027_3105 14976e48dbcff7fb0b6875df6c29f649 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.7E-54 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 SMART SM00382 311 502 3.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 SMART SM00382 34 234 1.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 Pfam PF00005 ABC transporter 303 453 1.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 526 8.3E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 262 3.4E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 SUPERFAMILY SSF52540 278 524 2.15E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 Pfam PF00005 ABC transporter 27 184 2.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 SUPERFAMILY SSF52540 5 256 6.3E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 Gene3D G3DSA:3.40.50.300 3 273 3.8E-82 T 14-10-2018 VAB027_575 5ba1cd012d40c1daf2ad958d234c75d1 530 Gene3D G3DSA:3.40.50.300 274 528 1.2E-80 T 14-10-2018 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 SUPERFAMILY SSF51726 396 757 3.01E-114 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 PIRSF PIRSF000382 1 761 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 SUPERFAMILY SSF51726 4 393 6.41E-108 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 36.007 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 3.0E-120 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAB027_2350 7cd02faf71ebe5e73fb477b04b3b69f2 761 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 9.5E-151 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 Gene3D G3DSA:1.20.20.10 2 77 5.3E-28 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 SUPERFAMILY SSF81333 3 78 3.4E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.5E-30 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.368 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAB027_3723 7b6f2e465d7808c2a771ecd3991fb9b4 85 Pfam PF00137 ATP synthase subunit C 10 72 3.2E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 SUPERFAMILY SSF46689 191 238 4.66E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 205 220 4.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 236 4.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 Gene3D G3DSA:2.60.120.10 1 81 2.4E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 SMART SM00342 154 236 2.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 Pfam PF02311 AraC-like ligand binding domain 9 122 1.5E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 SUPERFAMILY SSF51182 9 163 2.4E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 Gene3D G3DSA:1.10.10.60 134 239 2.2E-23 T 14-10-2018 VAB027_1187 969812c9afbd9d73d40c44c85a056de0 241 Pfam PF12833 Helix-turn-helix domain 160 237 1.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_2183 62332861d8d38a68f71f6b79052dcdf4 457 Pfam PF01554 MatE 17 176 4.6E-38 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2183 62332861d8d38a68f71f6b79052dcdf4 457 Pfam PF01554 MatE 243 404 2.2E-36 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2183 62332861d8d38a68f71f6b79052dcdf4 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 3.0E-120 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2183 62332861d8d38a68f71f6b79052dcdf4 457 PIRSF PIRSF006603 5 452 8.2E-63 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_3537 6b27ce68f64bc7ace58e9ef5f41d5d13 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAB027_3537 6b27ce68f64bc7ace58e9ef5f41d5d13 89 Gene3D G3DSA:3.10.20.30 1 89 2.6E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_3537 6b27ce68f64bc7ace58e9ef5f41d5d13 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 78 3.2E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAB027_3537 6b27ce68f64bc7ace58e9ef5f41d5d13 89 SUPERFAMILY SSF54292 1 87 4.98E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_1796 5a4ad1892fa89cb53da1ba3a39ecae55 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 28.624 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VAB027_1796 5a4ad1892fa89cb53da1ba3a39ecae55 231 PIRSF PIRSF006755 1 229 7.8E-72 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VAB027_1796 5a4ad1892fa89cb53da1ba3a39ecae55 231 SUPERFAMILY SSF52540 1 215 2.89E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1796 5a4ad1892fa89cb53da1ba3a39ecae55 231 Pfam PF13500 AAA domain 4 212 4.4E-37 T 14-10-2018 VAB027_1796 5a4ad1892fa89cb53da1ba3a39ecae55 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.6E-52 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VAB027_1796 5a4ad1892fa89cb53da1ba3a39ecae55 231 Gene3D G3DSA:3.40.50.300 3 224 1.1E-64 T 14-10-2018 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 SUPERFAMILY SSF53474 5 254 2.2E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 Pfam PF00561 alpha/beta hydrolase fold 15 242 1.5E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 4.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 4.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 4.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 4.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 Gene3D G3DSA:3.40.50.1820 5 254 1.7E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00412 Epoxide hydrolase signature 39 54 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00412 Epoxide hydrolase signature 96 109 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00412 Epoxide hydrolase signature 230 252 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_2733 f645c57aa9812879b3bfb03a59eba6dd 257 PRINTS PR00412 Epoxide hydrolase signature 82 95 4.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_1463 24ef818a36a0ab68df614113bf01e230 155 SUPERFAMILY SSF47413 79 139 5.18E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1463 24ef818a36a0ab68df614113bf01e230 155 Gene3D G3DSA:1.10.260.40 80 146 5.9E-7 T 14-10-2018 VAB027_1463 24ef818a36a0ab68df614113bf01e230 155 SMART SM00530 82 138 0.0028 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_1463 24ef818a36a0ab68df614113bf01e230 155 Pfam PF01381 Helix-turn-helix 83 129 3.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 SMART SM01118 2 203 2.5E-43 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 Gene3D G3DSA:1.40.20.10 210 412 8.0E-17 T 14-10-2018 IPR038186 CHAD domain superfamily VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 SMART SM00880 229 497 3.8E-27 T 14-10-2018 IPR007899 CHAD domain VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 Pfam PF01928 CYTH domain 3 197 6.8E-36 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 Gene3D G3DSA:2.40.320.10 1 200 5.3E-36 T 14-10-2018 VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 SUPERFAMILY SSF55154 1 218 4.09E-53 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VAB027_3067 5474c7f5970d1ad9bd5c4a24f8461ac4 505 Pfam PF05235 CHAD domain 230 396 4.2E-11 T 14-10-2018 IPR007899 CHAD domain VAB027_663 537de567752655a1e8d1e745498ec356 94 Pfam PF04221 RelB antitoxin 5 73 1.0E-5 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ VAB027_663 537de567752655a1e8d1e745498ec356 94 Gene3D G3DSA:1.10.1220.10 2 69 5.9E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAB027_1452 bb084b2a2d8009181c6c175733903b75 178 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 178 35.955 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAB027_1452 bb084b2a2d8009181c6c175733903b75 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 9 174 5.1E-64 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAB027_1452 bb084b2a2d8009181c6c175733903b75 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 9 173 5.2E-56 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAB027_375 69bbbf7d21e846c1f8ad586f38559341 223 Pfam PF01575 MaoC like domain 79 198 1.9E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain VAB027_375 69bbbf7d21e846c1f8ad586f38559341 223 Gene3D G3DSA:3.10.129.10 73 221 5.0E-35 T 14-10-2018 VAB027_375 69bbbf7d21e846c1f8ad586f38559341 223 SUPERFAMILY SSF54637 75 216 7.88E-29 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_564 b73741ea67c239676589ec4b89af8337 566 SUPERFAMILY SSF161098 297 547 6.21E-33 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_564 b73741ea67c239676589ec4b89af8337 566 Gene3D G3DSA:1.10.3720.10 302 553 8.8E-30 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_564 b73741ea67c239676589ec4b89af8337 566 Gene3D G3DSA:1.10.3720.10 20 283 1.3E-52 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_564 b73741ea67c239676589ec4b89af8337 566 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 26 566 3.4E-242 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative VAB027_564 b73741ea67c239676589ec4b89af8337 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 386 552 2.4E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_564 b73741ea67c239676589ec4b89af8337 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 279 1.6E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_564 b73741ea67c239676589ec4b89af8337 566 SUPERFAMILY SSF161098 21 277 3.27E-46 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2319 bce5c5653345f7bb4b4df8fec35ec066 193 Pfam PF03352 Methyladenine glycosylase 11 186 1.2E-73 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VAB027_2319 bce5c5653345f7bb4b4df8fec35ec066 193 Gene3D G3DSA:1.10.340.30 7 191 6.0E-78 T 14-10-2018 VAB027_2319 bce5c5653345f7bb4b4df8fec35ec066 193 SUPERFAMILY SSF48150 9 189 1.02E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAB027_1710 9dfd3bca463a957899b64bda76fd5d0f 81 Gene3D G3DSA:3.10.20.30 1 81 3.1E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_1710 9dfd3bca463a957899b64bda76fd5d0f 81 Pfam PF02597 ThiS family 4 81 1.1E-24 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VAB027_1710 9dfd3bca463a957899b64bda76fd5d0f 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.2E-22 T 14-10-2018 VAB027_1710 9dfd3bca463a957899b64bda76fd5d0f 81 SUPERFAMILY SSF54285 1 81 4.49E-23 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VAB027_157 f468702844ffc618e1c667355ae5597e 291 Gene3D G3DSA:3.90.1280.10 225 282 3.0E-20 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VAB027_157 f468702844ffc618e1c667355ae5597e 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 33.29 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VAB027_157 f468702844ffc618e1c667355ae5597e 291 Gene3D G3DSA:1.10.287.480 177 224 1.9E-22 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VAB027_157 f468702844ffc618e1c667355ae5597e 291 Gene3D G3DSA:3.55.30.10 1 175 1.9E-63 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VAB027_157 f468702844ffc618e1c667355ae5597e 291 Pfam PF01430 Hsp33 protein 6 272 3.9E-81 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VAB027_157 f468702844ffc618e1c667355ae5597e 291 SUPERFAMILY SSF118352 224 281 1.24E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VAB027_157 f468702844ffc618e1c667355ae5597e 291 PIRSF PIRSF005261 1 282 8.2E-70 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VAB027_157 f468702844ffc618e1c667355ae5597e 291 SUPERFAMILY SSF64397 3 231 3.92E-76 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 Gene3D G3DSA:2.40.50.940 230 292 3.2E-11 T 14-10-2018 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 Gene3D G3DSA:3.40.50.300 11 229 3.0E-70 T 14-10-2018 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 SMART SM00382 36 219 5.1E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 Pfam PF00005 ABC transporter 29 168 7.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 SUPERFAMILY SSF50331 244 357 3.46E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 Gene3D G3DSA:2.40.50.140 293 310 3.2E-11 T 14-10-2018 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 SUPERFAMILY SSF52540 12 251 1.91E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 Pfam PF08402 TOBE domain 286 365 5.1E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAB027_2101 963b64a2a0c41bac50c73d78fc491587 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 8.1E-158 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VAB027_678 50a79972901b998121a026822a821d1c 137 SUPERFAMILY SSF54593 9 134 2.42E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_678 50a79972901b998121a026822a821d1c 137 Gene3D G3DSA:3.10.180.10 2 131 8.2E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_678 50a79972901b998121a026822a821d1c 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 1.6E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_2155 d20139d65099066fc93a7bf41017460f 246 Gene3D G3DSA:3.40.50.1220 8 225 1.5E-78 T 14-10-2018 VAB027_2155 d20139d65099066fc93a7bf41017460f 246 Pfam PF02146 Sir2 family 13 186 3.6E-50 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 VAB027_2155 d20139d65099066fc93a7bf41017460f 246 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 54.732 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VAB027_2155 d20139d65099066fc93a7bf41017460f 246 Gene3D G3DSA:3.30.1600.10 22 158 1.5E-78 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VAB027_2155 d20139d65099066fc93a7bf41017460f 246 SUPERFAMILY SSF52467 6 234 8.0E-71 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAB027_1258 8e6aaeaf32711ebdfd955dd5aab16fa2 69 Gene3D G3DSA:1.10.10.610 1 67 2.0E-29 T 14-10-2018 IPR036685 YehU-like superfamily VAB027_1258 8e6aaeaf32711ebdfd955dd5aab16fa2 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 4.4E-34 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VAB027_1258 8e6aaeaf32711ebdfd955dd5aab16fa2 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 55 6.0E-25 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VAB027_1258 8e6aaeaf32711ebdfd955dd5aab16fa2 69 PIRSF PIRSF006169 1 68 9.0E-35 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VAB027_1258 8e6aaeaf32711ebdfd955dd5aab16fa2 69 SUPERFAMILY SSF118001 1 65 3.14E-28 T 14-10-2018 IPR036685 YehU-like superfamily VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 SUPERFAMILY SSF55957 374 466 2.22E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 7.0E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.40.120.10 1 170 6.0E-47 T 14-10-2018 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.6E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 SUPERFAMILY SSF53738 250 379 4.71E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.30.310.50 383 469 7.4E-16 T 14-10-2018 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 3.7E-39 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.40.120.10 171 365 8.7E-60 T 14-10-2018 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.40.120.10 263 370 8.7E-60 T 14-10-2018 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 SUPERFAMILY SSF53738 2 187 3.92E-40 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_3237 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 465 1.7E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAB027_2000 1474a0106cf2698e95e8a44f26f0a0eb 324 Gene3D G3DSA:3.40.50.2300 132 276 4.2E-113 T 14-10-2018 VAB027_2000 1474a0106cf2698e95e8a44f26f0a0eb 324 Gene3D G3DSA:3.40.50.2300 26 299 4.2E-113 T 14-10-2018 VAB027_2000 1474a0106cf2698e95e8a44f26f0a0eb 324 SUPERFAMILY SSF53822 23 323 3.62E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_2000 1474a0106cf2698e95e8a44f26f0a0eb 324 Pfam PF13407 Periplasmic binding protein domain 26 296 1.3E-59 T 14-10-2018 IPR025997 Periplasmic binding protein VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 SUPERFAMILY SSF46689 3 79 5.08E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 Gene3D G3DSA:1.10.357.10 65 191 1.6E-16 T 14-10-2018 VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 Gene3D G3DSA:1.10.10.60 1 64 8.7E-20 T 14-10-2018 VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 9.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 165 2.0E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VAB027_1128 919d3f2cd56b009e6fd9a0703b1f50b0 191 SUPERFAMILY SSF48498 77 190 6.68E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_1555 4f444073d4b729164059c74b75d52d72 74 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 70 2.0E-32 T 14-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain VAB027_1555 4f444073d4b729164059c74b75d52d72 74 Gene3D G3DSA:1.10.260.40 1 69 7.5E-34 T 14-10-2018 VAB027_1555 4f444073d4b729164059c74b75d52d72 74 SUPERFAMILY SSF47413 3 69 1.84E-28 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_886 d2171b55fb29733aa429689066801873 1245 Gene3D G3DSA:2.60.40.10 164 255 8.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_886 d2171b55fb29733aa429689066801873 1245 Pfam PF12561 ToxR activated gene A lipoprotein 723 856 3.5E-61 T 14-10-2018 IPR022218 ToxR activated gene A lipoprotein VAB027_886 d2171b55fb29733aa429689066801873 1245 Gene3D G3DSA:3.30.160.280 1012 1077 6.2E-15 T 14-10-2018 VAB027_886 d2171b55fb29733aa429689066801873 1245 Gene3D G3DSA:3.30.160.280 1184 1245 1.1E-13 T 14-10-2018 VAB027_886 d2171b55fb29733aa429689066801873 1245 Pfam PF10462 Peptidase M66 352 657 4.7E-96 T 14-10-2018 IPR019503 Peptidase M66 domain GO:0004222 VAB027_1919 1ee033253179c88162b9d8adb3797907 200 Gene3D G3DSA:3.40.50.1240 1 200 1.6E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VAB027_1919 1ee033253179c88162b9d8adb3797907 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 5.3E-32 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAB027_1919 1ee033253179c88162b9d8adb3797907 200 SMART SM00855 3 151 1.0E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAB027_1919 1ee033253179c88162b9d8adb3797907 200 SUPERFAMILY SSF53254 1 195 1.07E-33 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 SUPERFAMILY SSF53383 59 454 9.33E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 Gene3D G3DSA:3.40.640.10 94 353 1.2E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 270 307 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 Gene3D G3DSA:3.90.1150.10 66 449 1.2E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 PIRSF PIRSF000521 17 161 1.3E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 PIRSF PIRSF000521 155 457 1.1E-20 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_559 3e24b4ffa1a5a13be3ed539ef05cb774 465 Pfam PF00202 Aminotransferase class-III 61 454 5.8E-86 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_2593 d42c09f4ab1c9d9b278dc99a4e177237 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 4.4E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VAB027_2593 d42c09f4ab1c9d9b278dc99a4e177237 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.9E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VAB027_2593 d42c09f4ab1c9d9b278dc99a4e177237 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 397 3.3E-138 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VAB027_2593 d42c09f4ab1c9d9b278dc99a4e177237 401 Pfam PF07670 Nucleoside recognition 89 184 1.7E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_1606 78c93fc5516c890647565e722a700bb4 116 Gene3D G3DSA:3.40.50.2300 1 108 4.1E-19 T 14-10-2018 VAB027_1606 78c93fc5516c890647565e722a700bb4 116 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 98 1.6E-10 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAB027_1606 78c93fc5516c890647565e722a700bb4 116 SUPERFAMILY SSF52788 2 100 3.14E-18 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VAB027_1922 03b2632d4261c55f7428f93c1861203d 251 SUPERFAMILY SSF52540 16 231 6.83E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1922 03b2632d4261c55f7428f93c1861203d 251 SMART SM00382 22 213 2.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1922 03b2632d4261c55f7428f93c1861203d 251 Pfam PF00005 ABC transporter 15 164 1.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1922 03b2632d4261c55f7428f93c1861203d 251 Gene3D G3DSA:3.40.50.300 3 250 1.9E-58 T 14-10-2018 VAB027_1922 03b2632d4261c55f7428f93c1861203d 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 45.271 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VAB027_2369 ee3806a510efdf66c810f0fcc7b60662 103 Pfam PF09413 Putative prokaryotic signal transducing protein 1 68 4.2E-10 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 VAB027_1615 f9d846bb7b944f7515d49c938b5abd45 143 SUPERFAMILY SSF51161 2 137 4.57E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_1615 f9d846bb7b944f7515d49c938b5abd45 143 PIRSF PIRSF000441 1 142 3.7E-40 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAB027_1615 f9d846bb7b944f7515d49c938b5abd45 143 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 83 115 1.7E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_1615 f9d846bb7b944f7515d49c938b5abd45 143 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 53 74 2.1E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_1615 f9d846bb7b944f7515d49c938b5abd45 143 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 91 119 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_1615 f9d846bb7b944f7515d49c938b5abd45 143 Gene3D G3DSA:2.160.10.10 33 141 3.7E-31 T 14-10-2018 VAB027_2899 2c66459a0516f5fd43ce840cebcc3015 243 SUPERFAMILY SSF53633 7 240 5.37E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2899 2c66459a0516f5fd43ce840cebcc3015 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.4E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VAB027_2899 2c66459a0516f5fd43ce840cebcc3015 243 Gene3D G3DSA:3.40.1160.10 3 243 5.7E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_2899 2c66459a0516f5fd43ce840cebcc3015 243 Pfam PF00696 Amino acid kinase family 11 219 1.2E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_2899 2c66459a0516f5fd43ce840cebcc3015 243 PIRSF PIRSF005650 4 243 5.1E-89 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VAB027_2899 2c66459a0516f5fd43ce840cebcc3015 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.284 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VAB027_920 174cd3da89ba937427834af9e85cceab 145 Pfam PF04965 Gene 25-like lysozyme 38 124 1.3E-16 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VAB027_920 174cd3da89ba937427834af9e85cceab 145 Gene3D G3DSA:3.10.450.40 15 135 6.4E-9 T 14-10-2018 VAB027_920 174cd3da89ba937427834af9e85cceab 145 SUPERFAMILY SSF160719 34 138 2.09E-20 T 14-10-2018 VAB027_920 174cd3da89ba937427834af9e85cceab 145 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 144 4.1E-40 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VAB027_3622 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 SUPERFAMILY SSF51161 68 199 1.14E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_3622 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_3622 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 7.5E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3622 fbb0eee0e4a3d7eaf2b21c82f6d81133 232 Gene3D G3DSA:2.160.10.10 13 214 4.7E-49 T 14-10-2018 VAB027_125 3bd79b22784525553401d30deaf00e49 409 Pfam PF02881 SRP54-type protein, helical bundle domain 125 186 4.0E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_125 3bd79b22784525553401d30deaf00e49 409 Pfam PF00448 SRP54-type protein, GTPase domain 206 405 8.1E-78 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_125 3bd79b22784525553401d30deaf00e49 409 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 133 406 64.393 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VAB027_125 3bd79b22784525553401d30deaf00e49 409 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 379 392 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_125 3bd79b22784525553401d30deaf00e49 409 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 133 405 1.8E-115 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VAB027_125 3bd79b22784525553401d30deaf00e49 409 SMART SM00382 204 384 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_125 3bd79b22784525553401d30deaf00e49 409 SMART SM00963 110 190 4.2E-26 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_125 3bd79b22784525553401d30deaf00e49 409 Gene3D G3DSA:1.20.120.140 107 404 4.8E-117 T 14-10-2018 VAB027_125 3bd79b22784525553401d30deaf00e49 409 SUPERFAMILY SSF47364 105 184 1.96E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VAB027_125 3bd79b22784525553401d30deaf00e49 409 Gene3D G3DSA:3.40.50.300 205 394 4.8E-117 T 14-10-2018 VAB027_125 3bd79b22784525553401d30deaf00e49 409 SUPERFAMILY SSF52540 201 406 1.19E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_125 3bd79b22784525553401d30deaf00e49 409 SMART SM00962 205 406 2.4E-123 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 Gene3D G3DSA:3.30.1360.60 395 475 1.1E-29 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 SUPERFAMILY SSF55604 399 472 9.15E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 Pfam PF00367 phosphotransferase system, EIIB 403 434 2.2E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.7E-75 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.3E-198 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VAB027_2650 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 8.4E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAB027_2387 0ed6a3ee99e257f22f188068cd955596 542 Pfam PF02470 MlaD protein 44 134 2.3E-9 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2387 0ed6a3ee99e257f22f188068cd955596 542 Pfam PF02470 MlaD protein 163 216 4.3E-7 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2387 0ed6a3ee99e257f22f188068cd955596 542 Pfam PF02470 MlaD protein 287 391 8.9E-17 T 14-10-2018 IPR003399 Mce/MlaD VAB027_3567 183ba2c1b478eae56e2924764842d957 519 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 3.9E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_3567 183ba2c1b478eae56e2924764842d957 519 Gene3D G3DSA:1.25.40.10 350 511 4.2E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3567 183ba2c1b478eae56e2924764842d957 519 SMART SM00862 24 100 1.2E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_3567 183ba2c1b478eae56e2924764842d957 519 Gene3D G3DSA:1.10.10.10 5 105 5.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3567 183ba2c1b478eae56e2924764842d957 519 SUPERFAMILY SSF46894 6 103 3.68E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2231 acc57d089bb37225b355c42e40cd0b25 96 Gene3D G3DSA:3.30.70.100 1 94 5.5E-23 T 14-10-2018 VAB027_2231 acc57d089bb37225b355c42e40cd0b25 96 SUPERFAMILY SSF54909 1 94 1.65E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_2231 acc57d089bb37225b355c42e40cd0b25 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 72 1.8E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VAB027_1336 8595e6c5115555829ed588d776e90819 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.3E-27 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAB027_1336 8595e6c5115555829ed588d776e90819 95 Gene3D G3DSA:3.30.160.100 1 95 7.1E-39 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAB027_1336 8595e6c5115555829ed588d776e90819 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.2E-32 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAB027_1336 8595e6c5115555829ed588d776e90819 95 SUPERFAMILY SSF69754 1 95 3.27E-34 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAB027_1186 68830046041245e0eb9894d3251423b2 311 Gene3D G3DSA:3.40.630.10 4 308 5.9E-119 T 14-10-2018 VAB027_1186 68830046041245e0eb9894d3251423b2 311 SUPERFAMILY SSF53187 36 301 5.62E-37 T 14-10-2018 VAB027_1186 68830046041245e0eb9894d3251423b2 311 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 177 1.5E-6 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAB027_3422 05c2caf84b91443b7cf2d098a20dd001 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 1.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3422 05c2caf84b91443b7cf2d098a20dd001 184 SUPERFAMILY SSF54523 8 94 7.85E-13 T 14-10-2018 VAB027_3422 05c2caf84b91443b7cf2d098a20dd001 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 5.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3422 05c2caf84b91443b7cf2d098a20dd001 184 Gene3D G3DSA:3.30.700.10 8 119 5.4E-11 T 14-10-2018 VAB027_3422 05c2caf84b91443b7cf2d098a20dd001 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 SUPERFAMILY SSF53697 7 319 8.01E-70 T 14-10-2018 VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 2.7E-116 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 PIRSF PIRSF004692 1 324 1.8E-131 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 Pfam PF01380 SIS domain 42 173 7.2E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 SMART SM00116 211 259 2.3 T 14-10-2018 IPR000644 CBS domain VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 SMART SM00116 276 323 0.53 T 14-10-2018 IPR000644 CBS domain VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 Pfam PF00571 CBS domain 205 259 1.1E-4 T 14-10-2018 IPR000644 CBS domain VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 Pfam PF00571 CBS domain 270 321 6.0E-6 T 14-10-2018 IPR000644 CBS domain VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 Gene3D G3DSA:3.10.580.10 197 321 1.6E-43 T 14-10-2018 VAB027_1342 8e4e368fd356832761b0ac6463d32548 324 Gene3D G3DSA:3.40.50.10490 6 196 6.0E-66 T 14-10-2018 VAB027_3058 c48b5f54a7d7849a35982423aeb7299a 195 SUPERFAMILY SSF53474 6 193 9.24E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_3058 c48b5f54a7d7849a35982423aeb7299a 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 2.5E-77 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VAB027_3058 c48b5f54a7d7849a35982423aeb7299a 195 Gene3D G3DSA:3.40.50.1820 7 195 1.4E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_580 dc107932e9d6aa14db44a054a1a910d1 261 Gene3D G3DSA:3.40.190.10 28 258 1.1E-19 T 14-10-2018 VAB027_580 dc107932e9d6aa14db44a054a1a910d1 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 260 9.9E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_580 dc107932e9d6aa14db44a054a1a910d1 261 Gene3D G3DSA:3.40.190.10 109 214 1.1E-19 T 14-10-2018 VAB027_580 dc107932e9d6aa14db44a054a1a910d1 261 SUPERFAMILY SSF53850 20 260 5.92E-28 T 14-10-2018 VAB027_2677 0ff95895d8c339f6fcef2c451abd5c29 600 Gene3D G3DSA:3.40.720.10 250 539 3.5E-38 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAB027_2677 0ff95895d8c339f6fcef2c451abd5c29 600 PIRSF PIRSF004950 6 598 3.0E-249 T 14-10-2018 IPR012159 Inner membrane protein YejM VAB027_2677 0ff95895d8c339f6fcef2c451abd5c29 600 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.8E-101 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VAB027_2677 0ff95895d8c339f6fcef2c451abd5c29 600 SUPERFAMILY SSF53649 259 580 3.14E-49 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAB027_2677 0ff95895d8c339f6fcef2c451abd5c29 600 Pfam PF00884 Sulfatase 265 513 6.6E-23 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAB027_803 8330c4f1e5ae19c4c58d971f98bf40c9 230 SMART SM01007 7 197 6.8E-65 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VAB027_803 8330c4f1e5ae19c4c58d971f98bf40c9 230 SUPERFAMILY SSF53639 2 220 1.12E-64 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VAB027_803 8330c4f1e5ae19c4c58d971f98bf40c9 230 Gene3D G3DSA:3.40.225.10 1 229 5.6E-56 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VAB027_803 8330c4f1e5ae19c4c58d971f98bf40c9 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.0E-43 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VAB027_1540 b34f7874ddfcaa1c9d65ada1ee7e5121 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 8.1E-113 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VAB027_1540 b34f7874ddfcaa1c9d65ada1ee7e5121 258 PIRSF PIRSF029037 1 258 4.1E-115 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VAB027_2247 b6d9b06dedb52eed2492fe56e399e119 229 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 2.8E-35 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 VAB027_2247 b6d9b06dedb52eed2492fe56e399e119 229 PIRSF PIRSF028063 1 221 3.7E-142 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VAB027_1063 1bddc1cf5c2c1a8f8c8b2f05b882099d 496 Pfam PF00474 Sodium:solute symporter family 35 436 1.3E-105 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAB027_1063 1bddc1cf5c2c1a8f8c8b2f05b882099d 496 Gene3D G3DSA:1.20.1730.10 9 495 2.5E-96 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VAB027_1063 1bddc1cf5c2c1a8f8c8b2f05b882099d 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 2.5E-215 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 VAB027_1063 1bddc1cf5c2c1a8f8c8b2f05b882099d 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site VAB027_1063 1bddc1cf5c2c1a8f8c8b2f05b882099d 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 436 6.8E-93 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAB027_3561 f3e24baa0ddc1c8d788207bf7f909d4c 201 Pfam PF01081 KDPG and KHG aldolase 3 195 1.4E-74 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAB027_3561 f3e24baa0ddc1c8d788207bf7f909d4c 201 SUPERFAMILY SSF51569 2 199 1.39E-66 T 14-10-2018 VAB027_3561 f3e24baa0ddc1c8d788207bf7f909d4c 201 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 3 200 2.5E-86 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAB027_3561 f3e24baa0ddc1c8d788207bf7f909d4c 201 Gene3D G3DSA:3.20.20.70 1 201 3.1E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3561 f3e24baa0ddc1c8d788207bf7f909d4c 201 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAB027_3561 f3e24baa0ddc1c8d788207bf7f909d4c 201 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAB027_1019 bdb58b4bb511429ae7380669c4dd1c37 405 SUPERFAMILY SSF52540 108 369 2.53E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1019 bdb58b4bb511429ae7380669c4dd1c37 405 Pfam PF13614 AAA domain 110 296 8.5E-23 T 14-10-2018 IPR025669 AAA domain VAB027_1019 bdb58b4bb511429ae7380669c4dd1c37 405 Gene3D G3DSA:3.40.50.300 107 398 2.8E-56 T 14-10-2018 VAB027_1019 bdb58b4bb511429ae7380669c4dd1c37 405 Gene3D G3DSA:1.10.1660.30 36 102 1.0E-5 T 14-10-2018 VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 14-10-2018 VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 Gene3D G3DSA:3.40.50.1000 3 267 1.3E-58 T 14-10-2018 IPR023214 HAD superfamily VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 1.9E-17 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 3.9E-61 T 14-10-2018 VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 Gene3D G3DSA:3.30.1240.10 82 195 1.3E-58 T 14-10-2018 VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 SUPERFAMILY SSF56784 1 271 1.91E-62 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 4.4E-53 T 14-10-2018 IPR000150 Cof family GO:0016787 VAB027_804 9a6a6464c1ecd50d04a608583ee701bd 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 VAB027_3318 3586ee253e970a9a897cf2a1441aea51 250 SUPERFAMILY SSF64167 1 246 3.4E-86 T 14-10-2018 VAB027_3318 3586ee253e970a9a897cf2a1441aea51 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 41.889 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAB027_3318 3586ee253e970a9a897cf2a1441aea51 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 3.4E-74 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAB027_3318 3586ee253e970a9a897cf2a1441aea51 250 Gene3D G3DSA:3.40.1210.10 1 250 1.6E-96 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAB027_3318 3586ee253e970a9a897cf2a1441aea51 250 Pfam PF01975 Survival protein SurE 3 181 1.7E-61 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 SUPERFAMILY SSF54523 35 141 1.73E-38 T 14-10-2018 VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 Gene3D G3DSA:3.30.700.10 32 140 2.6E-45 T 14-10-2018 VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 Pfam PF08334 Type II secretion system (T2SS), protein G 32 140 3.1E-43 T 14-10-2018 IPR013545 Type II secretion system protein G VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 1.1E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 2.9E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 2.9E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VAB027_163 4d103ac3cd88fd21537ff76dbd077629 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 141 6.5E-59 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 Gene3D G3DSA:3.30.465.10 196 288 1.4E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 SUPERFAMILY SSF54631 54 190 5.61E-34 T 14-10-2018 VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 Gene3D G3DSA:3.10.580.10 49 195 8.8E-54 T 14-10-2018 VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF03471 Transporter associated domain 204 279 9.0E-22 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM00116 76 125 0.0037 T 14-10-2018 IPR000644 CBS domain VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM00116 139 187 0.028 T 14-10-2018 IPR000644 CBS domain VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM01091 203 281 1.3E-29 T 14-10-2018 IPR005170 Transporter-associated domain VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 SUPERFAMILY SSF56176 198 280 7.09E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF00571 CBS domain 67 124 1.9E-8 T 14-10-2018 IPR000644 CBS domain VAB027_1648 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF00571 CBS domain 138 187 1.5E-6 T 14-10-2018 IPR000644 CBS domain VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 Gene3D G3DSA:3.40.50.300 1 210 3.5E-75 T 14-10-2018 VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 Gene3D G3DSA:3.40.50.300 215 418 4.6E-45 T 14-10-2018 VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 SMART SM00490 257 338 3.6E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 SUPERFAMILY SSF52540 73 359 9.46E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 50.556 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 Pfam PF00271 Helicase conserved C-terminal domain 230 338 2.8E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 SMART SM00487 20 219 1.7E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_840 8dbe411d7339f1971f0606db1bc2086d 464 Pfam PF00270 DEAD/DEAH box helicase 26 194 5.8E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_2439 c05bab0bd824a0bc28a3da40bb6aa9bc 256 SUPERFAMILY SSF53474 4 251 1.06E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2439 c05bab0bd824a0bc28a3da40bb6aa9bc 256 Gene3D G3DSA:3.40.50.1820 2 252 2.9E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_2439 c05bab0bd824a0bc28a3da40bb6aa9bc 256 Pfam PF12146 Serine aminopeptidase, S33 18 239 5.6E-18 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VAB027_2439 c05bab0bd824a0bc28a3da40bb6aa9bc 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 5.3E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2439 c05bab0bd824a0bc28a3da40bb6aa9bc 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 5.3E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2439 c05bab0bd824a0bc28a3da40bb6aa9bc 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 5.3E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.30.930.10 11 465 5.3E-236 T 14-10-2018 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.40.50.800 4 554 5.3E-236 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF55681 10 478 2.3E-99 T 14-10-2018 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.181 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.90.960.10 240 389 5.3E-236 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF52954 463 570 2.13E-33 T 14-10-2018 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.1E-42 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 8.9E-247 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF55826 218 390 3.79E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 PIRSF PIRSF001535 1 571 3.2E-266 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 5.7E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 Pfam PF03129 Anticodon binding domain 475 568 1.0E-23 T 14-10-2018 IPR004154 Anticodon-binding VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAB027_1513 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 SUPERFAMILY SSF48452 34 286 3.35E-67 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 Gene3D G3DSA:1.25.40.10 26 296 1.6E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 100 133 5.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 66 99 0.78 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 237 270 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 134 167 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3198 24ab53eef124e4be58b87076e2fc84c6 303 PIRSF PIRSF004654 1 294 1.1E-89 T 14-10-2018 IPR023605 Lipoprotein NlpI VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 SUPERFAMILY SSF143800 1 68 6.67E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.084 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 Pfam PF01197 Ribosomal protein L31 1 66 9.6E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 Gene3D G3DSA:2.30.170.50 1 71 1.4E-31 T 14-10-2018 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.0E-34 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.8E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.8E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_216 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.8E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 SUPERFAMILY SSF58104 312 621 6.67E-78 T 14-10-2018 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 SUPERFAMILY SSF103190 84 169 9.42E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 486 515 2.0E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 484 2.0E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 2.0E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 Pfam PF00672 HAMP domain 295 341 4.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 Pfam PF02743 Cache domain 32 252 3.0E-24 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 587 7.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 Gene3D G3DSA:1.10.287.950 290 621 1.9E-71 T 14-10-2018 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 Gene3D G3DSA:3.30.450.20 56 163 1.0E-52 T 14-10-2018 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 Gene3D G3DSA:3.30.450.20 45 263 1.0E-52 T 14-10-2018 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 SMART SM00304 287 344 8.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1065 c246b99964b08c5ce4dfacb0de955f71 621 SMART SM00283 359 620 4.0E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 SUPERFAMILY SSF47413 3 60 3.19E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 Gene3D G3DSA:1.10.260.40 3 60 8.9E-20 T 14-10-2018 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 303 6.5E-136 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 Gene3D G3DSA:3.40.50.2300 68 302 2.7E-64 T 14-10-2018 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 SUPERFAMILY SSF53822 63 305 5.1E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 Pfam PF13377 Periplasmic binding protein-like domain 168 303 1.5E-18 T 14-10-2018 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 Gene3D G3DSA:3.40.50.2300 163 279 2.7E-64 T 14-10-2018 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.8E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1545 5ea2259ed17be391c6856b43ad6c0e42 316 SMART SM00354 4 74 6.8E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1444 5fc7db981f095c8e8b00f7c9de21b95d 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 3.3E-178 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAB027_1444 5fc7db981f095c8e8b00f7c9de21b95d 433 PIRSF PIRSF015658 1 432 7.7E-173 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAB027_1444 5fc7db981f095c8e8b00f7c9de21b95d 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 430 1.9E-157 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 SUPERFAMILY SSF56935 27 358 1.18E-40 T 14-10-2018 VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 350 358 9.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 9.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 9.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 156 167 9.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 Gene3D G3DSA:2.40.160.10 24 358 6.5E-41 T 14-10-2018 IPR023614 Porin domain superfamily VAB027_1660 168e1085453dd636b2cd34ba84a8bfd4 358 Pfam PF00267 Gram-negative porin 29 358 2.6E-8 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 207 313 5.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_461 71f94c03273a9d4d048030408add7b5a 315 Gene3D G3DSA:1.10.287.130 38 157 6.8E-24 T 14-10-2018 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 Gene3D G3DSA:3.30.565.10 166 315 8.4E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_461 71f94c03273a9d4d048030408add7b5a 315 SUPERFAMILY SSF55874 154 314 1.03E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_461 71f94c03273a9d4d048030408add7b5a 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 273 2.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 2.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 259 2.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 2.6E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 SUPERFAMILY SSF47384 56 95 1.26E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_461 71f94c03273a9d4d048030408add7b5a 315 SMART SM00387 204 315 1.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_461 71f94c03273a9d4d048030408add7b5a 315 Pfam PF00512 His Kinase A (phospho-acceptor) domain 62 104 5.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_3716 18db8af6964db240db6947282255a90a 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 7.5E-210 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VAB027_3716 18db8af6964db240db6947282255a90a 453 Pfam PF12804 MobA-like NTP transferase domain 6 127 4.2E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase VAB027_3716 18db8af6964db240db6947282255a90a 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 2.7E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3716 18db8af6964db240db6947282255a90a 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 295 4.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3716 18db8af6964db240db6947282255a90a 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 5.1E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3716 18db8af6964db240db6947282255a90a 453 SUPERFAMILY SSF53448 1 249 2.92E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3716 18db8af6964db240db6947282255a90a 453 Gene3D G3DSA:2.160.10.10 225 453 2.9E-73 T 14-10-2018 VAB027_3716 18db8af6964db240db6947282255a90a 453 SUPERFAMILY SSF51161 252 434 2.02E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_3716 18db8af6964db240db6947282255a90a 453 Gene3D G3DSA:3.90.550.10 1 224 2.9E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3716 18db8af6964db240db6947282255a90a 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.839 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VAB027_462 c6f5a9873efe5726876d91c3a1ae0373 721 Pfam PF13515 Fusaric acid resistance protein-like 405 524 1.7E-22 T 14-10-2018 VAB027_462 c6f5a9873efe5726876d91c3a1ae0373 721 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS VAB027_462 c6f5a9873efe5726876d91c3a1ae0373 721 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 2.3E-111 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VAB027_462 c6f5a9873efe5726876d91c3a1ae0373 721 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.9E-242 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 67 85 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 127 146 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 230 249 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 168 187 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 148 167 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 296 317 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 354 373 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 PRINTS PR00181 Maltose binding protein signature 33 51 2.1E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 Gene3D G3DSA:3.40.190.10 45 354 4.3E-134 T 14-10-2018 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 3.6E-44 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 Gene3D G3DSA:3.40.190.10 135 385 4.3E-134 T 14-10-2018 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 SUPERFAMILY SSF53850 25 392 1.86E-90 T 14-10-2018 VAB027_1178 50a5fc10711b6d8fb84856aad03248be 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 Gene3D G3DSA:3.40.190.10 164 261 6.1E-45 T 14-10-2018 VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 SUPERFAMILY SSF46785 8 88 2.18E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 Gene3D G3DSA:3.40.190.10 92 286 6.1E-45 T 14-10-2018 VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 SUPERFAMILY SSF53850 90 290 5.91E-35 T 14-10-2018 VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 Pfam PF03466 LysR substrate binding domain 88 289 1.7E-34 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_944 4b08d9b7a759dedf00df557e96c5a391 295 Gene3D G3DSA:1.10.10.10 3 91 6.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1375 218a849d3c80ffde455ee514f7638a04 107 Pfam PF08921 Domain of unknown function (DUF1904) 1 106 7.7E-38 T 14-10-2018 IPR015017 Protein of unknown function DUF1904 VAB027_1375 218a849d3c80ffde455ee514f7638a04 107 SUPERFAMILY SSF55331 1 107 1.34E-37 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VAB027_1375 218a849d3c80ffde455ee514f7638a04 107 Gene3D G3DSA:3.30.429.10 1 107 4.1E-46 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 Pfam PF01765 Ribosome recycling factor 20 183 1.4E-63 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 SUPERFAMILY SSF55194 2 184 2.22E-72 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:3.30.1360.40 35 100 7.5E-30 T 14-10-2018 VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.9E-76 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.755 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:1.10.132.20 101 185 1.6E-29 T 14-10-2018 VAB027_2898 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:1.10.132.20 1 34 6.9E-8 T 14-10-2018 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Pfam PF06251 Capsule biosynthesis GfcC 662 865 8.2E-11 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Pfam PF02563 Polysaccharide biosynthesis/export protein 120 182 1.9E-13 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Pfam PF10531 SLBB domain 201 249 4.5E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Pfam PF10531 SLBB domain 559 600 2.0E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Pfam PF10531 SLBB domain 284 333 2.8E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Gene3D G3DSA:3.10.560.10 362 453 1.1E-8 T 14-10-2018 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Gene3D G3DSA:3.10.560.10 545 642 5.4E-12 T 14-10-2018 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Gene3D G3DSA:3.10.560.10 784 862 4.7E-12 T 14-10-2018 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Gene3D G3DSA:3.10.560.10 279 361 8.9E-13 T 14-10-2018 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 Gene3D G3DSA:3.10.560.10 192 278 4.0E-17 T 14-10-2018 VAB027_3575 0984952f8b868b7d53a83ad75877fee0 891 SUPERFAMILY SSF142984 282 332 5.23E-6 T 14-10-2018 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 Gene3D G3DSA:1.10.540.10 123 236 1.5E-99 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 2.6E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 Gene3D G3DSA:2.40.110.10 237 360 1.5E-99 T 14-10-2018 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 SUPERFAMILY SSF56645 121 356 8.25E-42 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 9.1E-113 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 Gene3D G3DSA:1.20.140.10 361 508 1.5E-99 T 14-10-2018 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 SUPERFAMILY SSF47203 361 508 7.41E-24 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VAB027_2873 e4aec950a78344a7bd3d1d278424bb65 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 5.7E-15 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 Gene3D G3DSA:3.40.190.10 27 240 2.1E-75 T 14-10-2018 VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 SMART SM00062 22 243 1.3E-71 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 SUPERFAMILY SSF53850 1 242 3.96E-67 T 14-10-2018 VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 SMART SM00079 22 243 0.0025 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 3.4E-78 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.3E-64 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_418 7fe3d2cc5813486a74fd368782ac6efb 243 Gene3D G3DSA:3.40.190.10 109 201 2.1E-75 T 14-10-2018 VAB027_1025 85c5a74f37951caf503cadf790610a8a 227 SMART SM01236 74 175 5.9E-6 T 14-10-2018 VAB027_1025 85c5a74f37951caf503cadf790610a8a 227 Pfam PF14518 Iron-containing redox enzyme 40 208 1.5E-23 T 14-10-2018 VAB027_1025 85c5a74f37951caf503cadf790610a8a 227 SUPERFAMILY SSF48613 2 218 8.76E-62 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VAB027_1025 85c5a74f37951caf503cadf790610a8a 227 Gene3D G3DSA:1.20.910.10 4 227 8.5E-59 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VAB027_3159 d147e33cfc177c130d7719a40b848f60 598 Gene3D G3DSA:1.20.1530.20 4 389 1.3E-12 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VAB027_3159 d147e33cfc177c130d7719a40b848f60 598 Pfam PF02254 TrkA-N domain 399 497 1.5E-6 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAB027_3159 d147e33cfc177c130d7719a40b848f60 598 Gene3D G3DSA:3.40.50.720 397 512 7.9E-11 T 14-10-2018 VAB027_3159 d147e33cfc177c130d7719a40b848f60 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 386 1.5E-28 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAB027_3159 d147e33cfc177c130d7719a40b848f60 598 SUPERFAMILY SSF51735 399 499 2.04E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2846 66cb26ffc3e3426f23a54c68e10db96c 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 102 2.3E-24 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VAB027_2846 66cb26ffc3e3426f23a54c68e10db96c 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 1.5E-17 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VAB027_2846 66cb26ffc3e3426f23a54c68e10db96c 107 SUPERFAMILY SSF101498 3 101 2.62E-20 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VAB027_279 d2e00268d688fa4b117a3cfe2e41c99c 103 Pfam PF16083 LydA holin phage, holin superfamily III 18 91 1.8E-22 T 14-10-2018 IPR032126 LydA-like holin VAB027_514 1f6b53508baa07e41ab86ac2b6a4849a 145 Gene3D G3DSA:1.10.3440.10 12 144 4.0E-5 T 14-10-2018 IPR023132 Sama2622-like superfamily VAB027_514 1f6b53508baa07e41ab86ac2b6a4849a 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 2.6E-51 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 VAB027_514 1f6b53508baa07e41ab86ac2b6a4849a 145 SUPERFAMILY SSF158675 1 145 3.79E-51 T 14-10-2018 IPR023132 Sama2622-like superfamily VAB027_352 6073d9478ec53c1820f8428d21f9a79c 298 SUPERFAMILY SSF161111 9 213 2.22E-33 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAB027_352 6073d9478ec53c1820f8428d21f9a79c 298 Gene3D G3DSA:1.20.1510.10 9 214 1.5E-22 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAB027_352 6073d9478ec53c1820f8428d21f9a79c 298 Pfam PF01545 Cation efflux family 13 214 1.1E-38 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAB027_352 6073d9478ec53c1820f8428d21f9a79c 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 274 4.6E-27 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 Gene3D G3DSA:3.40.50.720 171 425 7.7E-82 T 14-10-2018 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 Pfam PF00390 Malic enzyme, N-terminal domain 35 160 1.0E-26 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 SUPERFAMILY SSF51735 173 421 2.74E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 367 5.4E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 PIRSF PIRSF000106 49 425 4.0E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 Gene3D G3DSA:3.40.50.10380 8 170 1.4E-65 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 SMART SM00919 173 409 8.9E-135 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 SUPERFAMILY SSF53223 20 171 4.75E-51 T 14-10-2018 VAB027_215 fa0d4a70e3097ba959d2db4b34744286 425 SMART SM01274 28 161 1.3E-71 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAB027_3111 514c493a03d2ea5044f0bcba96eb71e1 177 Gene3D G3DSA:1.20.144.10 89 177 1.7E-21 T 14-10-2018 VAB027_3111 514c493a03d2ea5044f0bcba96eb71e1 177 Pfam PF01569 PAP2 superfamily 67 175 1.5E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAB027_3111 514c493a03d2ea5044f0bcba96eb71e1 177 SUPERFAMILY SSF48317 6 173 3.27E-38 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VAB027_3111 514c493a03d2ea5044f0bcba96eb71e1 177 SMART SM00014 64 170 6.0E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 Gene3D G3DSA:1.10.287.950 249 432 1.2E-44 T 14-10-2018 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 254 1.4E-14 T 14-10-2018 IPR000014 PAS domain VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 137 2.6E-17 T 14-10-2018 IPR000014 PAS domain VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 429 1.5E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SMART SM00283 239 430 9.1E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 Pfam PF13426 PAS domain 153 253 3.7E-11 T 14-10-2018 IPR000014 PAS domain VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 Gene3D G3DSA:3.30.450.20 125 248 2.8E-21 T 14-10-2018 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 Gene3D G3DSA:3.30.450.20 5 124 3.3E-21 T 14-10-2018 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SMART SM00091 17 87 0.38 T 14-10-2018 IPR000014 PAS domain VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SMART SM00091 139 207 0.16 T 14-10-2018 IPR000014 PAS domain VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 Pfam PF08447 PAS fold 42 127 1.6E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SMART SM00086 92 134 0.12 T 14-10-2018 IPR001610 PAC motif VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SMART SM00086 212 254 0.032 T 14-10-2018 IPR001610 PAC motif VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SUPERFAMILY SSF58104 231 430 2.22E-52 T 14-10-2018 VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SUPERFAMILY SSF55785 153 252 1.93E-21 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_2080 4a7698ce1ed9c262a5e0d526c7e2db64 432 SUPERFAMILY SSF55785 30 131 4.71E-24 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 SUPERFAMILY SSF51261 148 310 2.67E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 Gene3D G3DSA:3.10.350.10 37 98 1.0E-10 T 14-10-2018 IPR036779 LysM domain superfamily VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 SUPERFAMILY SSF54106 46 91 9.02E-10 T 14-10-2018 VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 Pfam PF01476 LysM domain 48 90 1.5E-11 T 14-10-2018 IPR018392 LysM domain VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 SMART SM00257 47 91 1.0E-10 T 14-10-2018 IPR018392 LysM domain VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 Pfam PF01551 Peptidase family M23 212 306 1.3E-30 T 14-10-2018 IPR016047 Peptidase M23 VAB027_3316 34623a812af62af6d3c1c1b535b7920c 311 Gene3D G3DSA:2.70.70.10 175 310 1.0E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_702 d28b84ceb15f7a9da2398496c409bf16 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 70 2.0E-13 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_702 d28b84ceb15f7a9da2398496c409bf16 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 5.4E-11 T 14-10-2018 VAB027_702 d28b84ceb15f7a9da2398496c409bf16 85 SUPERFAMILY SSF143120 1 74 6.02E-16 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_3115 de9a9d6aef41e051d2aeb2dc9489c4c1 200 Pfam PF00694 Aconitase C-terminal domain 1 125 8.7E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VAB027_3115 de9a9d6aef41e051d2aeb2dc9489c4c1 200 SUPERFAMILY SSF52016 1 196 1.63E-61 T 14-10-2018 VAB027_3115 de9a9d6aef41e051d2aeb2dc9489c4c1 200 Gene3D G3DSA:3.20.19.10 1 180 4.9E-78 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VAB027_3115 de9a9d6aef41e051d2aeb2dc9489c4c1 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 7.0E-97 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VAB027_3115 de9a9d6aef41e051d2aeb2dc9489c4c1 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.991 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 PIRSF PIRSF015753 4 312 8.1E-138 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 Gene3D G3DSA:1.20.1050.10 169 315 1.5E-72 T 14-10-2018 VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 SUPERFAMILY SSF52833 31 150 1.31E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 SUPERFAMILY SSF47616 164 313 6.82E-41 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.9E-21 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 Gene3D G3DSA:3.40.30.130 1 168 1.3E-65 T 14-10-2018 VAB027_1777 794d4e6843cbffabcf81b29bb541c7b8 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 1.1E-13 T 14-10-2018 VAB027_1594 10c2e1015ed363472cd2d44d97a93021 494 PIRSF PIRSF007349 1 494 1.6E-148 T 14-10-2018 IPR007067 Tail sheath protein VAB027_1594 10c2e1015ed363472cd2d44d97a93021 494 Pfam PF17482 Phage tail sheath C-terminal domain 376 491 3.0E-19 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain VAB027_1594 10c2e1015ed363472cd2d44d97a93021 494 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 207 367 3.1E-29 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain VAB027_97 91a3bf74659831cec7676b9af8efda4a 212 Gene3D G3DSA:3.40.50.150 116 204 3.4E-9 T 14-10-2018 VAB027_97 91a3bf74659831cec7676b9af8efda4a 212 Pfam PF13489 Methyltransferase domain 62 197 1.4E-20 T 14-10-2018 VAB027_97 91a3bf74659831cec7676b9af8efda4a 212 Gene3D G3DSA:3.40.50.150 2 115 5.5E-6 T 14-10-2018 VAB027_97 91a3bf74659831cec7676b9af8efda4a 212 SUPERFAMILY SSF53335 46 198 1.3E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 Pfam PF03887 YfbU domain 1 166 2.2E-70 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 Gene3D G3DSA:1.10.287.680 1 53 1.3E-33 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 SUPERFAMILY SSF116960 1 166 1.31E-63 T 14-10-2018 VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.662 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-96 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 Gene3D G3DSA:1.10.3190.10 54 166 1.2E-37 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VAB027_2516 a615b22eb34bde86c74f4642a97fe560 166 PIRSF PIRSF006272 1 166 1.6E-82 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 Gene3D G3DSA:1.20.1080.10 4 270 2.1E-88 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 Pfam PF00571 CBS domain 313 364 1.4E-8 T 14-10-2018 IPR000644 CBS domain VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 Gene3D G3DSA:3.10.580.10 308 466 4.1E-24 T 14-10-2018 VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 SUPERFAMILY SSF54631 309 464 1.96E-22 T 14-10-2018 VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 SMART SM00116 320 368 0.0051 T 14-10-2018 IPR000644 CBS domain VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 SMART SM00116 418 465 52.0 T 14-10-2018 IPR000644 CBS domain VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 1.1E-111 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 Pfam PF01226 Formate/nitrite transporter 17 277 3.8E-71 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAB027_620 cfad21cd2156cea051b328aad27f4b93 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 6.7E-77 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 232 261 2.6E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 338 367 2.6E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 309 336 2.6E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 SMART SM00304 143 196 0.0062 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 436 5.3E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 SUPERFAMILY SSF58104 163 472 3.66E-66 T 14-10-2018 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 Gene3D G3DSA:1.10.287.950 147 473 1.7E-63 T 14-10-2018 VAB027_403 e66d78edfa645ee0bd7e9568f264ba4a 473 SMART SM00283 211 472 7.4E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 SUPERFAMILY SSF55816 338 548 2.49E-25 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 Gene3D G3DSA:3.60.21.10 20 326 5.3E-76 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 Gene3D G3DSA:3.90.780.10 330 545 8.5E-32 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 1.1E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 SUPERFAMILY SSF56300 20 327 1.9E-76 T 14-10-2018 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 491 3.2E-22 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 PRINTS PR01607 Apyrase family signature 475 494 8.9E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 PRINTS PR01607 Apyrase family signature 257 277 8.9E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 PRINTS PR01607 Apyrase family signature 203 220 8.9E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 PRINTS PR01607 Apyrase family signature 230 253 8.9E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_3041 a4adf294d603174bc3215ca7678a3aa0 634 PRINTS PR01607 Apyrase family signature 26 44 8.9E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_766 429cec52b19074a31bf58c411a68c3c0 85 SUPERFAMILY SSF143120 1 74 1.7E-16 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_766 429cec52b19074a31bf58c411a68c3c0 85 Gene3D G3DSA:3.40.1620.10 1 40 1.5E-5 T 14-10-2018 VAB027_766 429cec52b19074a31bf58c411a68c3c0 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 5.4E-11 T 14-10-2018 VAB027_766 429cec52b19074a31bf58c411a68c3c0 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 8.7E-15 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_2067 41e39446bdcc63adb0f994377051043d 505 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 1.9E-55 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 SUPERFAMILY SSF48173 191 468 4.58E-77 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VAB027_2067 41e39446bdcc63adb0f994377051043d 505 Pfam PF00875 DNA photolyase 6 135 1.7E-20 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 Gene3D G3DSA:1.25.40.80 136 278 2.5E-15 T 14-10-2018 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 Gene3D G3DSA:1.10.579.10 289 481 3.0E-57 T 14-10-2018 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 Gene3D G3DSA:3.40.50.620 1 128 1.6E-25 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2067 41e39446bdcc63adb0f994377051043d 505 SUPERFAMILY SSF52425 3 194 3.79E-41 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 PRINTS PR00147 DNA photolyase signature 336 354 2.3E-5 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_2067 41e39446bdcc63adb0f994377051043d 505 PRINTS PR00147 DNA photolyase signature 316 332 2.3E-5 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAB027_1278 a06f7175b099c7582a5efb6f7eed1b69 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1278 a06f7175b099c7582a5efb6f7eed1b69 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.2E-49 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1278 a06f7175b099c7582a5efb6f7eed1b69 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.588 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1278 a06f7175b099c7582a5efb6f7eed1b69 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 5.4E-40 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VAB027_1278 a06f7175b099c7582a5efb6f7eed1b69 110 SUPERFAMILY SSF54843 1 109 6.15E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1278 a06f7175b099c7582a5efb6f7eed1b69 110 Gene3D G3DSA:3.90.470.10 1 110 2.5E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1046 4ea4de02eba0ba4ebaaa0f000b2522da 99 Gene3D G3DSA:3.30.750.24 2 99 2.3E-17 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_1046 4ea4de02eba0ba4ebaaa0f000b2522da 99 Pfam PF13466 STAS domain 18 90 3.1E-10 T 14-10-2018 IPR002645 STAS domain VAB027_1046 4ea4de02eba0ba4ebaaa0f000b2522da 99 SUPERFAMILY SSF52091 6 98 7.26E-20 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 Gene3D G3DSA:3.30.420.40 3 195 4.4E-69 T 14-10-2018 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 173.595 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 SUPERFAMILY SSF53067 158 396 5.98E-81 T 14-10-2018 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.4E-148 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PIRSF PIRSF000722 2 397 5.0E-138 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 SUPERFAMILY SSF53067 5 196 2.14E-65 T 14-10-2018 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 Pfam PF00871 Acetokinase family 6 391 7.5E-147 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PRINTS PR00471 Acetate kinase family signature 203 224 1.9E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PRINTS PR00471 Acetate kinase family signature 173 186 1.9E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PRINTS PR00471 Acetate kinase family signature 321 337 1.9E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PRINTS PR00471 Acetate kinase family signature 378 390 1.9E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PRINTS PR00471 Acetate kinase family signature 299 312 1.9E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 PRINTS PR00471 Acetate kinase family signature 6 17 1.9E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAB027_812 1a17890bd1ba646efdd354ca1e7a690d 397 Gene3D G3DSA:3.30.420.40 196 397 1.1E-74 T 14-10-2018 VAB027_814 e54061cef7778309273a7e9258800c9f 659 Pfam PF00593 TonB dependent receptor 236 657 8.0E-37 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_814 e54061cef7778309273a7e9258800c9f 659 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 133 9.1E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_814 e54061cef7778309273a7e9258800c9f 659 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 642 659 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VAB027_814 e54061cef7778309273a7e9258800c9f 659 Gene3D G3DSA:2.40.170.20 147 659 5.4E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_814 e54061cef7778309273a7e9258800c9f 659 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 42 659 9.1E-133 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VAB027_814 e54061cef7778309273a7e9258800c9f 659 Gene3D G3DSA:2.170.130.10 38 145 1.9E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_814 e54061cef7778309273a7e9258800c9f 659 SUPERFAMILY SSF56935 23 659 5.86E-79 T 14-10-2018 VAB027_3091 3aef3cf158615d387f4f73b2e8180bcf 321 PIRSF PIRSF005427 1 316 7.6E-86 T 14-10-2018 IPR005588 MucB/RseB VAB027_3091 3aef3cf158615d387f4f73b2e8180bcf 321 Pfam PF17188 MucB/RseB C-terminal domain 217 311 6.9E-28 T 14-10-2018 IPR033436 MucB/RseB, C-terminal VAB027_3091 3aef3cf158615d387f4f73b2e8180bcf 321 Gene3D G3DSA:2.50.20.10 24 208 3.2E-53 T 14-10-2018 VAB027_3091 3aef3cf158615d387f4f73b2e8180bcf 321 Pfam PF03888 MucB/RseB N-terminal domain 25 195 3.0E-59 T 14-10-2018 IPR033434 MucB/RseB, N-terminal VAB027_3091 3aef3cf158615d387f4f73b2e8180bcf 321 Gene3D G3DSA:3.30.200.100 217 316 2.0E-28 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VAB027_71 d3b3bee16883d8ddd427f8b1aa9c4d33 303 SUPERFAMILY SSF103481 43 144 4.05E-13 T 14-10-2018 VAB027_71 d3b3bee16883d8ddd427f8b1aa9c4d33 303 SUPERFAMILY SSF103481 189 293 3.79E-12 T 14-10-2018 VAB027_71 d3b3bee16883d8ddd427f8b1aa9c4d33 303 Pfam PF00892 EamA-like transporter family 9 141 5.7E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_71 d3b3bee16883d8ddd427f8b1aa9c4d33 303 Pfam PF00892 EamA-like transporter family 155 286 6.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 SUPERFAMILY SSF55874 311 444 6.94E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 1.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 Gene3D G3DSA:1.10.287.130 185 290 3.4E-8 T 14-10-2018 VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 SMART SM00387 341 448 1.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 Gene3D G3DSA:3.30.565.10 308 452 4.4E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 446 1.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2286 066f40eef2504bcc62d061281af8a7ce 457 SUPERFAMILY SSF47384 222 288 1.06E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1842 5af5c7c36fd388dec6bb5df3884ca6d0 245 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 2.3E-51 T 14-10-2018 VAB027_1842 5af5c7c36fd388dec6bb5df3884ca6d0 245 SUPERFAMILY SSF50630 107 241 1.84E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VAB027_1842 5af5c7c36fd388dec6bb5df3884ca6d0 245 Gene3D G3DSA:2.40.70.10 104 234 3.4E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VAB027_1744 52bb26dabeb2757fa6aee66413b7a2df 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 7.7E-55 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VAB027_1744 52bb26dabeb2757fa6aee66413b7a2df 353 Gene3D G3DSA:3.40.1750.20 206 270 4.6E-44 T 14-10-2018 VAB027_1744 52bb26dabeb2757fa6aee66413b7a2df 353 Pfam PF01343 Peptidase family S49 165 313 5.5E-48 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VAB027_1744 52bb26dabeb2757fa6aee66413b7a2df 353 SUPERFAMILY SSF52096 103 303 3.8E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_1744 52bb26dabeb2757fa6aee66413b7a2df 353 Gene3D G3DSA:3.90.226.10 109 306 4.6E-44 T 14-10-2018 VAB027_740 38fda02c080dc1d6eb6607ff25c31fab 95 SUPERFAMILY SSF143011 1 93 1.1E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_740 38fda02c080dc1d6eb6607ff25c31fab 95 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 5.1E-39 T 14-10-2018 IPR007711 Toxin HigB-1 VAB027_740 38fda02c080dc1d6eb6607ff25c31fab 95 Gene3D G3DSA:3.30.2310.20 3 95 4.6E-18 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_3084 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Gene3D G3DSA:3.20.20.70 1 243 1.1E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_3084 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.7E-105 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAB027_3084 57b3a0cd0bb92ea1cc72437c229ce1d8 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 1.0E-98 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAB027_3084 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.73 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAB027_3084 57b3a0cd0bb92ea1cc72437c229ce1d8 243 SUPERFAMILY SSF63892 4 241 1.44E-101 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAB027_3578 5c8878763dc849f784d8b9d49bf96c10 229 Gene3D G3DSA:2.40.360.10 18 225 1.1E-58 T 14-10-2018 IPR023373 YmcC-like superfamily VAB027_3578 5c8878763dc849f784d8b9d49bf96c10 229 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 15 216 5.4E-51 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VAB027_3578 5c8878763dc849f784d8b9d49bf96c10 229 SUPERFAMILY SSF159270 21 223 9.02E-59 T 14-10-2018 IPR023373 YmcC-like superfamily VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 Pfam PF13580 SIS domain 52 172 3.0E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 SUPERFAMILY SSF53697 12 255 2.2E-74 T 14-10-2018 VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 3.0E-132 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 Gene3D G3DSA:1.10.8.1080 226 304 2.8E-31 T 14-10-2018 VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.252 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAB027_3158 dd49cc0bbef475b045c415d616f2df90 307 Gene3D G3DSA:3.40.50.10490 8 225 9.3E-85 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 8.9E-117 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 SUPERFAMILY SSF118215 15 403 5.36E-109 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.2E-44 T 14-10-2018 VAB027_1848 7862d4e4aa9a52e339b3e9f78f8f25a7 418 Gene3D G3DSA:1.10.3860.10 4 417 1.0E-116 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAB027_1087 0b1ac20e4c931698a25133e925caab22 176 Gene3D G3DSA:1.20.120.330 1 172 1.1E-70 T 14-10-2018 VAB027_1087 0b1ac20e4c931698a25133e925caab22 176 Pfam PF05068 Mannitol repressor 7 171 2.0E-63 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like VAB027_1087 0b1ac20e4c931698a25133e925caab22 176 SUPERFAMILY SSF158668 5 170 4.97E-59 T 14-10-2018 IPR038026 MtlR-like superfamily VAB027_757 2ed7ce189a5a063d80ba43a48e3bcc22 83 SUPERFAMILY SSF143120 11 74 6.54E-10 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_757 2ed7ce189a5a063d80ba43a48e3bcc22 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 71 2.2E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_757 2ed7ce189a5a063d80ba43a48e3bcc22 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 57 2.8E-6 T 14-10-2018 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 Gene3D G3DSA:3.40.50.150 1 211 9.8E-52 T 14-10-2018 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 Pfam PF05175 Methyltransferase small domain 21 107 8.2E-18 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 90 96 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 1 215 48.716 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 22 36 3.3E-6 T 14-10-2018 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 117 141 3.3E-6 T 14-10-2018 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 87 99 3.3E-6 T 14-10-2018 VAB027_3184 272af5af9dba5b72bad40a69212651b5 216 SUPERFAMILY SSF53335 17 163 1.25E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1808 4b0fb69a1369617efd5873ed2503a275 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 8.0E-107 T 14-10-2018 VAB027_1808 4b0fb69a1369617efd5873ed2503a275 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.461 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VAB027_1808 4b0fb69a1369617efd5873ed2503a275 205 SUPERFAMILY SSF101322 2 204 2.88E-79 T 14-10-2018 IPR035932 HflD-like superfamily VAB027_1808 4b0fb69a1369617efd5873ed2503a275 205 Gene3D G3DSA:1.10.3890.10 1 205 1.4E-77 T 14-10-2018 IPR035932 HflD-like superfamily VAB027_1808 4b0fb69a1369617efd5873ed2503a275 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 8.1E-76 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VAB027_3476 c559df6911b64fe6bfe204bb8b0c18bd 131 Pfam PF02635 DsrE/DsrF-like family 6 131 3.2E-26 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VAB027_3476 c559df6911b64fe6bfe204bb8b0c18bd 131 SUPERFAMILY SSF75169 6 131 3.73E-35 T 14-10-2018 IPR027396 DsrEFH-like VAB027_3476 c559df6911b64fe6bfe204bb8b0c18bd 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 8.8E-54 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VAB027_3476 c559df6911b64fe6bfe204bb8b0c18bd 131 Gene3D G3DSA:3.40.1260.10 1 131 1.4E-52 T 14-10-2018 IPR027396 DsrEFH-like VAB027_2343 bdae6f660496dae6867d89bd919a3d2d 276 Pfam PF13460 NAD(P)H-binding 9 177 2.2E-17 T 14-10-2018 IPR016040 NAD(P)-binding domain VAB027_2343 bdae6f660496dae6867d89bd919a3d2d 276 Gene3D G3DSA:3.40.50.720 1 275 3.9E-48 T 14-10-2018 VAB027_2343 bdae6f660496dae6867d89bd919a3d2d 276 SUPERFAMILY SSF51735 2 265 7.19E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_838 c6a80ec10b4fa5ba94301ea58108cd15 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 272 1.8E-62 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VAB027_838 c6a80ec10b4fa5ba94301ea58108cd15 276 Pfam PF02540 NAD synthase 21 270 5.3E-61 T 14-10-2018 IPR022310 NAD/GMP synthase VAB027_838 c6a80ec10b4fa5ba94301ea58108cd15 276 Gene3D G3DSA:3.40.50.620 1 276 2.7E-82 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_838 c6a80ec10b4fa5ba94301ea58108cd15 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 44.673 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VAB027_838 c6a80ec10b4fa5ba94301ea58108cd15 276 SUPERFAMILY SSF52402 2 276 4.19E-79 T 14-10-2018 VAB027_1996 94ecfe47d273f4ff9269303953534621 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 6.7E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1996 94ecfe47d273f4ff9269303953534621 234 Gene3D G3DSA:1.10.10.10 123 234 1.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1996 94ecfe47d273f4ff9269303953534621 234 SUPERFAMILY SSF52172 3 127 2.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1996 94ecfe47d273f4ff9269303953534621 234 SMART SM00448 5 115 3.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1996 94ecfe47d273f4ff9269303953534621 234 SMART SM00862 153 229 2.8E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1996 94ecfe47d273f4ff9269303953534621 234 Gene3D G3DSA:3.40.50.2300 1 122 5.7E-32 T 14-10-2018 VAB027_1996 94ecfe47d273f4ff9269303953534621 234 Pfam PF00072 Response regulator receiver domain 8 116 1.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1996 94ecfe47d273f4ff9269303953534621 234 SUPERFAMILY SSF46894 131 231 9.92E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 Gene3D G3DSA:1.10.10.1100 419 489 1.2E-19 T 14-10-2018 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 Pfam PF01266 FAD dependent oxidoreductase 10 359 1.7E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 SUPERFAMILY SSF54373 226 317 3.27E-12 T 14-10-2018 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 Gene3D G3DSA:3.50.50.60 10 366 5.8E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_431 04ea309309a1462fdfb88298caf4358e 547 Gene3D G3DSA:3.30.9.10 86 318 5.8E-78 T 14-10-2018 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 SUPERFAMILY SSF51905 9 371 6.68E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_431 04ea309309a1462fdfb88298caf4358e 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 483 2.6E-10 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VAB027_431 04ea309309a1462fdfb88298caf4358e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 4.0E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 4.0E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.0E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 4.0E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 4.0E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAB027_431 04ea309309a1462fdfb88298caf4358e 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 536 1.5E-263 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAB027_2657 c5409457fcbe82eac8fe31a9aac1b431 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.6E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAB027_2657 c5409457fcbe82eac8fe31a9aac1b431 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VAB027_2657 c5409457fcbe82eac8fe31a9aac1b431 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.8E-37 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VAB027_2657 c5409457fcbe82eac8fe31a9aac1b431 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.852 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VAB027_2657 c5409457fcbe82eac8fe31a9aac1b431 78 SUPERFAMILY SSF47336 2 76 7.07E-24 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_2657 c5409457fcbe82eac8fe31a9aac1b431 78 Gene3D G3DSA:1.10.1200.10 1 76 2.2E-30 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_394 596b7137172b261e74f509eae4a9d1be 165 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 148 1.2E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VAB027_394 596b7137172b261e74f509eae4a9d1be 165 SUPERFAMILY SSF52266 3 163 1.01E-45 T 14-10-2018 VAB027_394 596b7137172b261e74f509eae4a9d1be 165 Gene3D G3DSA:3.40.50.1110 1 165 7.4E-59 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VAB027_2307 07c1cb28744f1935e192438fe43f03de 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 3.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_2307 07c1cb28744f1935e192438fe43f03de 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 3.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_2307 07c1cb28744f1935e192438fe43f03de 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 3.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_2307 07c1cb28744f1935e192438fe43f03de 365 Pfam PF12698 ABC-2 family transporter protein 24 358 2.8E-48 T 14-10-2018 VAB027_3141 82f0ea086ed7664c035d0b750554fedf 585 Gene3D G3DSA:3.30.420.10 183 333 1.7E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_3141 82f0ea086ed7664c035d0b750554fedf 585 SUPERFAMILY SSF53098 143 317 3.16E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_3141 82f0ea086ed7664c035d0b750554fedf 585 Pfam PF00665 Integrase core domain 145 291 2.6E-14 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAB027_67 bd20b39af17e095285203501811c20ea 295 Pfam PF00892 EamA-like transporter family 139 277 5.7E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_67 bd20b39af17e095285203501811c20ea 295 SUPERFAMILY SSF103481 183 277 2.48E-6 T 14-10-2018 VAB027_67 bd20b39af17e095285203501811c20ea 295 SUPERFAMILY SSF103481 35 131 2.35E-5 T 14-10-2018 VAB027_67 bd20b39af17e095285203501811c20ea 295 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 2.8E-72 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VAB027_172 4d86518ae6622f83e08f86f5e96e0728 182 Gene3D G3DSA:3.90.79.10 7 182 3.1E-48 T 14-10-2018 VAB027_172 4d86518ae6622f83e08f86f5e96e0728 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_172 4d86518ae6622f83e08f86f5e96e0728 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_172 4d86518ae6622f83e08f86f5e96e0728 182 SUPERFAMILY SSF55811 4 177 2.44E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_172 4d86518ae6622f83e08f86f5e96e0728 182 Pfam PF00293 NUDIX domain 47 155 7.2E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_172 4d86518ae6622f83e08f86f5e96e0728 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 Gene3D G3DSA:1.10.10.10 127 228 7.6E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 SMART SM00448 3 116 3.0E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.0E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 SMART SM00862 150 225 2.0E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.2E-113 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 14-10-2018 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 Pfam PF00072 Response regulator receiver domain 5 116 4.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1380 eac7956e0dec48961869aa1607f0ba72 229 SUPERFAMILY SSF52172 3 184 1.42E-43 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2874 e6e9ecf9aa64f63d7988a79794dbfc59 419 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 401 2.3E-153 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VAB027_1940 d62fac01917f0b07d4a133c9164fcc17 420 Gene3D G3DSA:1.20.1420.20 15 402 9.2E-86 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VAB027_1940 d62fac01917f0b07d4a133c9164fcc17 420 Pfam PF09375 Imelysin 40 398 8.5E-97 T 14-10-2018 IPR018976 Imelysin-like domain VAB027_1755 c6b27690637c9479e59f9cd57c05799e 409 Pfam PF07690 Major Facilitator Superfamily 21 340 9.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_1755 c6b27690637c9479e59f9cd57c05799e 409 Gene3D G3DSA:1.20.1250.20 208 405 4.1E-12 T 14-10-2018 VAB027_1755 c6b27690637c9479e59f9cd57c05799e 409 SUPERFAMILY SSF103473 8 400 1.83E-31 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1755 c6b27690637c9479e59f9cd57c05799e 409 Gene3D G3DSA:1.20.1250.20 6 200 7.3E-13 T 14-10-2018 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 SUPERFAMILY SSF56327 173 436 1.6E-90 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.3E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 2.3E-49 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 Gene3D G3DSA:3.40.50.720 2 170 5.2E-66 T 14-10-2018 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 Gene3D G3DSA:3.90.110.10 171 439 1.4E-98 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VAB027_1960 873338f30627fce53cf4c936c13e5084 440 SUPERFAMILY SSF51735 6 170 9.11E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1960 873338f30627fce53cf4c936c13e5084 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 3.6E-61 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VAB027_2766 f4f6c2687c5024c757fb72a8f708d157 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 7.0E-30 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAB027_2766 f4f6c2687c5024c757fb72a8f708d157 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.35 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAB027_2766 f4f6c2687c5024c757fb72a8f708d157 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 6.1E-20 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAB027_2766 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 2.2E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAB027_2766 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 2.2E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAB027_2766 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 2.2E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAB027_3653 4d6c78933c881c272a9f06ffcde1ff4e 408 Gene3D G3DSA:3.90.220.20 213 350 8.8E-27 T 14-10-2018 VAB027_3653 4d6c78933c881c272a9f06ffcde1ff4e 408 Gene3D G3DSA:3.90.220.20 14 209 6.2E-27 T 14-10-2018 VAB027_3653 4d6c78933c881c272a9f06ffcde1ff4e 408 SUPERFAMILY SSF116734 221 399 1.24E-32 T 14-10-2018 VAB027_3653 4d6c78933c881c272a9f06ffcde1ff4e 408 SUPERFAMILY SSF116734 15 219 9.32E-29 T 14-10-2018 VAB027_3653 4d6c78933c881c272a9f06ffcde1ff4e 408 Pfam PF01420 Type I restriction modification DNA specificity domain 222 383 3.3E-25 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAB027_3653 4d6c78933c881c272a9f06ffcde1ff4e 408 Pfam PF01420 Type I restriction modification DNA specificity domain 17 202 8.2E-11 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAB027_55 6effc54ea6bdf940f93ae99e3af092fa 259 Pfam PF00899 ThiF family 10 241 7.8E-58 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAB027_55 6effc54ea6bdf940f93ae99e3af092fa 259 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 209 2.4E-84 T 14-10-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VAB027_55 6effc54ea6bdf940f93ae99e3af092fa 259 SUPERFAMILY SSF69572 2 245 8.37E-75 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAB027_55 6effc54ea6bdf940f93ae99e3af092fa 259 Gene3D G3DSA:3.40.50.720 2 250 1.5E-82 T 14-10-2018 VAB027_2157 a32e7c9bcaaf182041f6c13b55dcf4a6 355 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 123 328 3.9E-89 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VAB027_2157 a32e7c9bcaaf182041f6c13b55dcf4a6 355 Gene3D G3DSA:1.20.950.20 119 337 2.1E-64 T 14-10-2018 VAB027_2157 a32e7c9bcaaf182041f6c13b55dcf4a6 355 Pfam PF01292 Prokaryotic cytochrome b561 126 307 1.4E-26 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAB027_2157 a32e7c9bcaaf182041f6c13b55dcf4a6 355 SUPERFAMILY SSF81342 120 334 3.14E-46 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 Gene3D G3DSA:3.40.50.1000 2 310 1.5E-197 T 14-10-2018 IPR023214 HAD superfamily VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 Gene3D G3DSA:1.10.150.210 115 177 1.5E-197 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 101 310 5.6E-85 T 14-10-2018 VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 Gene3D G3DSA:3.30.70.2020 8 322 1.5E-197 T 14-10-2018 VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 4.3E-24 T 14-10-2018 VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 SUPERFAMILY SSF56784 104 310 2.57E-48 T 14-10-2018 IPR036412 HAD-like superfamily VAB027_2976 822ca903203572a5b9e6a9b7c379b58b 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 8.1E-16 T 14-10-2018 VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 SMART SM00316 69 132 6.4 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 SMART SM00316 3 64 10.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 SMART SM00316 145 207 2.3 T 14-10-2018 IPR022967 RNA-binding domain, S1 VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 PIRSF PIRSF012524 1 277 1.5E-107 T 14-10-2018 IPR014464 Conserved virulence factor B VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 Pfam PF13509 S1 domain 4 63 7.0E-23 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 Pfam PF13509 S1 domain 71 132 8.6E-5 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VAB027_2150 77d2baf6cbae6e8ece82fedd48fcad57 277 Gene3D G3DSA:1.10.10.10 215 277 8.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3307 cc3f67ac63895da48a672df90400ed88 168 Gene3D G3DSA:3.90.950.20 1 160 5.5E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal VAB027_3307 cc3f67ac63895da48a672df90400ed88 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 157 3.1E-48 T 14-10-2018 IPR008136 CinA, C-terminal VAB027_3307 cc3f67ac63895da48a672df90400ed88 168 SUPERFAMILY SSF142433 3 159 1.83E-53 T 14-10-2018 IPR036653 CinA-like, C-terminal VAB027_3307 cc3f67ac63895da48a672df90400ed88 168 Pfam PF02464 Competence-damaged protein 5 158 2.8E-55 T 14-10-2018 IPR008136 CinA, C-terminal VAB027_2223 4eaea5bc35ae52b03623378207c3e15f 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 31 169 7.3E-33 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VAB027_2223 4eaea5bc35ae52b03623378207c3e15f 171 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VAB027_2223 4eaea5bc35ae52b03623378207c3e15f 171 SUPERFAMILY SSF49329 23 170 1.44E-50 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VAB027_2223 4eaea5bc35ae52b03623378207c3e15f 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VAB027_2223 4eaea5bc35ae52b03623378207c3e15f 171 Gene3D G3DSA:2.60.40.200 18 170 8.5E-48 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VAB027_3289 e3121346ef6ba1c3dab5f2708440d907 153 Pfam PF09335 SNARE associated Golgi protein 50 148 5.6E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein VAB027_2519 425b5b969f3fc7849b04339391b639a7 516 Pfam PF04293 SpoVR like protein 24 453 2.8E-176 T 14-10-2018 IPR007390 Sporulation stage V, protein R VAB027_3059 6caf47a52c900c0be8dc7e2cb87b4ea1 222 Pfam PF00149 Calcineurin-like phosphoesterase 13 204 8.3E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_3059 6caf47a52c900c0be8dc7e2cb87b4ea1 222 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 222 8.0E-5 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VAB027_3059 6caf47a52c900c0be8dc7e2cb87b4ea1 222 SUPERFAMILY SSF56300 11 221 9.5E-51 T 14-10-2018 VAB027_3059 6caf47a52c900c0be8dc7e2cb87b4ea1 222 Gene3D G3DSA:3.60.21.10 2 222 2.3E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_3059 6caf47a52c900c0be8dc7e2cb87b4ea1 222 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 12 222 33.606 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VAB027_704 4cc836da8683605aa0d639a803158d6b 78 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 2.9E-19 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VAB027_704 4cc836da8683605aa0d639a803158d6b 78 SMART SM00360 2 75 8.7E-22 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VAB027_704 4cc836da8683605aa0d639a803158d6b 78 SUPERFAMILY SSF54928 2 77 7.52E-24 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VAB027_704 4cc836da8683605aa0d639a803158d6b 78 Gene3D G3DSA:3.30.70.330 1 78 1.8E-23 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAB027_2382 accc8e6f56239dcb3904669416d2e37a 303 Gene3D G3DSA:3.40.50.1100 13 283 8.6E-22 T 14-10-2018 VAB027_2382 accc8e6f56239dcb3904669416d2e37a 303 Gene3D G3DSA:3.40.50.1100 33 136 8.6E-22 T 14-10-2018 VAB027_2382 accc8e6f56239dcb3904669416d2e37a 303 SUPERFAMILY SSF53686 7 294 2.88E-56 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_2382 accc8e6f56239dcb3904669416d2e37a 303 PIRSF PIRSF006278 4 297 3.1E-18 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 SUPERFAMILY SSF143975 3 420 1.23E-134 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 SUPERFAMILY SSF52016 421 608 1.18E-60 T 14-10-2018 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.967 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 Pfam PF00920 Dehydratase family 34 604 3.2E-219 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.3E-263 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAB027_17 00c5d5b7e54292542727b9ad678f6131 613 Gene3D G3DSA:3.50.30.80 421 573 1.7E-55 T 14-10-2018 VAB027_368 23886cd8cdd920bf8e0b7937b0d4db83 186 SUPERFAMILY SSF50182 98 163 5.23E-7 T 14-10-2018 IPR010920 LSM domain superfamily VAB027_368 23886cd8cdd920bf8e0b7937b0d4db83 186 Pfam PF00924 Mechanosensitive ion channel 52 163 3.0E-9 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAB027_2905 541f82f1c134173bf9cd61fb92042a4d 169 PIRSF PIRSF006162 4 167 1.8E-54 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VAB027_2905 541f82f1c134173bf9cd61fb92042a4d 169 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 8.1E-52 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VAB027_2905 541f82f1c134173bf9cd61fb92042a4d 169 SUPERFAMILY SSF101307 8 160 9.94E-48 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 55 129 1.5E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 PRINTS PR00607 Class IE cytochrome C signature 65 76 2.4E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 PRINTS PR00607 Class IE cytochrome C signature 76 86 2.4E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 PRINTS PR00607 Class IE cytochrome C signature 119 130 2.4E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 PRINTS PR00607 Class IE cytochrome C signature 104 116 2.4E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 SUPERFAMILY SSF46626 56 129 5.04E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_3693 85154f96932e80d349cea5cfe4b5c462 133 Gene3D G3DSA:1.10.760.10 55 132 6.1E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 SUPERFAMILY SSF100950 79 234 2.34E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 SMART SM01134 73 234 1.5E-58 T 14-10-2018 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 8.6E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 8.6E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 Gene3D G3DSA:1.10.10.10 1 56 2.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 SUPERFAMILY SSF46785 9 66 1.09E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 1.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 SMART SM00420 9 61 2.1E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAB027_3337 f61bd788265f843a6a649e8d99a3e0c8 256 Pfam PF00455 DeoR C terminal sensor domain 78 233 4.8E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VAB027_1171 eda0819434e1cdb8109c28d89ac439f8 92 SUPERFAMILY SSF54534 7 90 7.85E-25 T 14-10-2018 VAB027_1171 eda0819434e1cdb8109c28d89ac439f8 92 Gene3D G3DSA:3.10.50.40 2 92 1.1E-32 T 14-10-2018 VAB027_1171 eda0819434e1cdb8109c28d89ac439f8 92 Pfam PF13616 PPIC-type PPIASE domain 14 89 1.6E-22 T 14-10-2018 VAB027_2522 75831c9d5b9a358d2d4a932497c95ad1 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 324 1.3E-96 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VAB027_2522 75831c9d5b9a358d2d4a932497c95ad1 335 SUPERFAMILY SSF52540 52 183 9.3E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2522 75831c9d5b9a358d2d4a932497c95ad1 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 321 9.3E-114 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VAB027_2522 75831c9d5b9a358d2d4a932497c95ad1 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.72 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VAB027_2130 8cd98b31d9d6312e9f61586c47de9d72 57 Pfam PF04957 Ribosome modulation factor 1 54 1.6E-28 T 14-10-2018 IPR007040 Ribosome modulation factor VAB027_2130 8cd98b31d9d6312e9f61586c47de9d72 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 3.0E-24 T 14-10-2018 IPR007040 Ribosome modulation factor VAB027_2130 8cd98b31d9d6312e9f61586c47de9d72 57 Gene3D G3DSA:1.10.10.620 1 57 2.1E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily VAB027_2130 8cd98b31d9d6312e9f61586c47de9d72 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.355 T 14-10-2018 IPR007040 Ribosome modulation factor VAB027_159 8961cec364cba912bee960e3e15de00a 305 PRINTS PR00810 Bacterial general secretion pathway protein C signature 110 119 4.4E-5 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VAB027_159 8961cec364cba912bee960e3e15de00a 305 PRINTS PR00810 Bacterial general secretion pathway protein C signature 259 269 4.4E-5 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VAB027_159 8961cec364cba912bee960e3e15de00a 305 Gene3D G3DSA:2.30.42.10 202 305 4.9E-28 T 14-10-2018 VAB027_159 8961cec364cba912bee960e3e15de00a 305 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 243 269 - T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VAB027_159 8961cec364cba912bee960e3e15de00a 305 Pfam PF11356 Type II secretion system protein C 33 173 2.6E-40 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal VAB027_159 8961cec364cba912bee960e3e15de00a 305 Gene3D G3DSA:2.30.30.830 107 174 5.1E-29 T 14-10-2018 VAB027_159 8961cec364cba912bee960e3e15de00a 305 SUPERFAMILY SSF50156 210 304 6.92E-18 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_159 8961cec364cba912bee960e3e15de00a 305 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 30 305 4.2E-111 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 Gene3D G3DSA:2.20.28.60 1 50 4.4E-26 T 14-10-2018 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PRINTS PR00143 Citrate synthase signature 241 269 1.4E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PRINTS PR00143 Citrate synthase signature 296 316 1.4E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PRINTS PR00143 Citrate synthase signature 219 234 1.4E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PRINTS PR00143 Citrate synthase signature 379 393 1.4E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PRINTS PR00143 Citrate synthase signature 359 375 1.4E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PRINTS PR00143 Citrate synthase signature 165 178 1.4E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 Gene3D G3DSA:1.10.580.10 57 411 4.7E-150 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 PIRSF PIRSF001369 38 429 3.2E-173 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 7.2E-136 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 SUPERFAMILY SSF48256 4 428 2.09E-170 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 6.7E-239 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 Gene3D G3DSA:1.10.230.10 268 376 4.7E-150 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VAB027_2728 59c04d32c92ccec94e1d0a0b5473df88 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAB027_2306 94f05222cb51f4360fa07e73dbff4946 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2306 94f05222cb51f4360fa07e73dbff4946 306 Gene3D G3DSA:3.40.50.300 1 236 1.7E-71 T 14-10-2018 VAB027_2306 94f05222cb51f4360fa07e73dbff4946 306 SMART SM00382 30 212 8.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2306 94f05222cb51f4360fa07e73dbff4946 306 SUPERFAMILY SSF52540 4 227 1.22E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2306 94f05222cb51f4360fa07e73dbff4946 306 Pfam PF00005 ABC transporter 22 165 4.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2437 3b4ccd18174109d2ae3e6169f3fdff63 1507 SMART SM01276 1072 1375 4.6E-82 T 14-10-2018 IPR031161 Peptidase family M60 domain VAB027_2437 3b4ccd18174109d2ae3e6169f3fdff63 1507 Pfam PF13322 Domain of unknown function (DUF4092) 389 564 9.1E-95 T 14-10-2018 IPR025385 Domain of unknown function DUF4092 VAB027_2437 3b4ccd18174109d2ae3e6169f3fdff63 1507 Gene3D G3DSA:1.10.390.30 1305 1463 4.6E-13 T 14-10-2018 VAB027_2437 3b4ccd18174109d2ae3e6169f3fdff63 1507 Pfam PF17291 N-terminal domain of M60-like peptidases 1069 1150 2.1E-7 T 14-10-2018 IPR035423 M60-like domain, N-terminal VAB027_2437 3b4ccd18174109d2ae3e6169f3fdff63 1507 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1175 1457 1.8E-41 T 14-10-2018 IPR031161 Peptidase family M60 domain VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 Pfam PF08668 HDOD domain 205 319 2.2E-14 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 Gene3D G3DSA:1.10.3210.10 195 369 4.4E-22 T 14-10-2018 VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 PIRSF PIRSF003180 1 403 2.2E-168 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 SUPERFAMILY SSF109604 181 399 2.2E-41 T 14-10-2018 VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 SUPERFAMILY SSF141868 5 192 4.32E-29 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 Pfam PF00563 EAL domain 75 190 1.6E-14 T 14-10-2018 IPR001633 EAL domain VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 Gene3D G3DSA:3.20.20.450 3 194 1.3E-17 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_2494 5f0b728bf721ca201d07f07ff5ce8f6a 404 SMART SM00052 2 195 0.0011 T 14-10-2018 IPR001633 EAL domain VAB027_1225 17010bb20ed21d2c3d3d2298207d0f52 127 SUPERFAMILY SSF54593 1 126 1.05E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_1225 17010bb20ed21d2c3d3d2298207d0f52 127 Gene3D G3DSA:3.10.180.10 7 126 5.2E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_1225 17010bb20ed21d2c3d3d2298207d0f52 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 6.0E-22 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_2631 22cf2fc300c70cf73dfc6da15060de4d 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 2.3E-28 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 VAB027_2238 34976b8c7f99da3efbdd2c893b73a95e 406 SUPERFAMILY SSF55073 248 390 9.42E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2238 34976b8c7f99da3efbdd2c893b73a95e 406 Gene3D G3DSA:3.30.70.270 238 397 2.4E-42 T 14-10-2018 VAB027_2238 34976b8c7f99da3efbdd2c893b73a95e 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 389 1.0E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_2238 34976b8c7f99da3efbdd2c893b73a95e 406 SMART SM00267 234 391 1.4E-38 T 14-10-2018 IPR000160 GGDEF domain VAB027_2238 34976b8c7f99da3efbdd2c893b73a95e 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 387 1.5E-35 T 14-10-2018 IPR000160 GGDEF domain VAB027_645 daced612a8d06b17a8b4e43778714422 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 9.3E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_645 daced612a8d06b17a8b4e43778714422 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 9.3E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_645 daced612a8d06b17a8b4e43778714422 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 9.3E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_645 daced612a8d06b17a8b4e43778714422 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 9.3E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAB027_645 daced612a8d06b17a8b4e43778714422 393 SUPERFAMILY SSF53383 1 390 1.36E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_645 daced612a8d06b17a8b4e43778714422 393 Gene3D G3DSA:3.40.640.10 45 312 4.0E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_645 daced612a8d06b17a8b4e43778714422 393 Pfam PF00155 Aminotransferase class I and II 28 389 9.5E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_645 daced612a8d06b17a8b4e43778714422 393 Gene3D G3DSA:3.90.1150.10 11 389 4.0E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_2462 49a3707c481424db76c9ee12c2a30334 663 Gene3D G3DSA:3.40.50.300 312 514 1.7E-18 T 14-10-2018 VAB027_2462 49a3707c481424db76c9ee12c2a30334 663 SUPERFAMILY SSF52540 316 509 1.43E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2462 49a3707c481424db76c9ee12c2a30334 663 Pfam PF07728 AAA domain (dynein-related subfamily) 355 503 9.3E-13 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 Pfam PF04055 Radical SAM superfamily 50 200 1.9E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 SUPERFAMILY SSF102114 5 310 1.83E-92 T 14-10-2018 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 SMART SM00729 43 255 1.0E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 4.4E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 Gene3D G3DSA:3.20.20.70 4 315 3.8E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 PIRSF PIRSF001619 1 318 5.1E-137 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 3.2E-125 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 SMART SM00876 220 312 2.3E-46 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_1793 fc8bb3c87810712596b209cea0e15890 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.767 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAB027_3103 93a48e8a377931149be4debd97fbb974 194 SUPERFAMILY SSF100950 4 194 1.23E-56 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VAB027_3103 93a48e8a377931149be4debd97fbb974 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 188 1.3E-43 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VAB027_3103 93a48e8a377931149be4debd97fbb974 194 Gene3D G3DSA:3.40.50.10420 1 193 4.7E-57 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VAB027_3103 93a48e8a377931149be4debd97fbb974 194 PIRSF PIRSF006806 1 191 1.4E-37 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VAB027_3103 93a48e8a377931149be4debd97fbb974 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 188 1.0E-53 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VAB027_3045 22be9dc64b697718806e7e9bf2ec4bec 172 Pfam PF00258 Flavodoxin 5 160 1.1E-25 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAB027_3045 22be9dc64b697718806e7e9bf2ec4bec 172 SUPERFAMILY SSF52218 1 168 2.1E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_3045 22be9dc64b697718806e7e9bf2ec4bec 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 5.4E-67 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAB027_3045 22be9dc64b697718806e7e9bf2ec4bec 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VAB027_3045 22be9dc64b697718806e7e9bf2ec4bec 172 PIRSF PIRSF038996 1 171 1.5E-56 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAB027_3045 22be9dc64b697718806e7e9bf2ec4bec 172 Gene3D G3DSA:3.40.50.360 1 172 9.7E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2312 15b994bfad9ef7c1b66b001a9645615e 566 SUPERFAMILY SSF161098 5 271 2.35E-22 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2312 15b994bfad9ef7c1b66b001a9645615e 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 367 535 1.0E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2312 15b994bfad9ef7c1b66b001a9645615e 566 Gene3D G3DSA:1.10.3720.10 297 547 1.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2312 15b994bfad9ef7c1b66b001a9645615e 566 Gene3D G3DSA:1.10.3720.10 4 281 2.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2312 15b994bfad9ef7c1b66b001a9645615e 566 SUPERFAMILY SSF161098 301 538 3.4E-26 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1209 cbc05c151a709a7a979a880584f1dc8c 167 Gene3D G3DSA:3.40.1570.10 1 167 6.1E-67 T 14-10-2018 VAB027_1209 cbc05c151a709a7a979a880584f1dc8c 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 161 5.9E-35 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VAB027_1209 cbc05c151a709a7a979a880584f1dc8c 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 1.5E-66 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VAB027_1209 cbc05c151a709a7a979a880584f1dc8c 167 PIRSF PIRSF030840 1 167 1.9E-62 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VAB027_1209 cbc05c151a709a7a979a880584f1dc8c 167 SUPERFAMILY SSF144064 1 164 4.84E-59 T 14-10-2018 VAB027_153 937a740892a0e84b488225c466203028 144 Gene3D G3DSA:3.50.80.10 1 144 5.7E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VAB027_153 937a740892a0e84b488225c466203028 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 3.9E-51 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VAB027_153 937a740892a0e84b488225c466203028 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.25 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VAB027_153 937a740892a0e84b488225c466203028 144 SUPERFAMILY SSF69500 2 143 6.8E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VAB027_153 937a740892a0e84b488225c466203028 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 143 4.7E-62 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 Pfam PF01230 HIT domain 12 109 1.1E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 SUPERFAMILY SSF54197 2 113 2.01E-34 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 27 45 1.3E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 6 22 1.3E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 95 105 1.3E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 Gene3D G3DSA:3.30.428.10 1 111 6.3E-34 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2541 78644aaa5dbf775b87faf60203d36ca0 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.40.50.720 2 139 1.4E-51 T 14-10-2018 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.40.50.720 233 366 5.3E-38 T 14-10-2018 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF116726 136 223 9.02E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.30.70.1450 140 232 2.0E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02080 TrkA-C domain 390 438 6.0E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02254 TrkA-N domain 3 115 5.0E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02254 TrkA-N domain 235 350 9.0E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF51735 232 376 1.11E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.30.70.1450 367 458 6.7E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF116726 390 437 5.75E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAB027_31 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF51735 1 151 6.33E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 452 1.8E-45 T 14-10-2018 IPR000160 GGDEF domain VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 2.5E-42 T 14-10-2018 IPR000160 GGDEF domain VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 Gene3D G3DSA:3.30.70.270 289 457 5.6E-52 T 14-10-2018 VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 Pfam PF03924 CHASE domain 109 220 1.0E-12 T 14-10-2018 IPR006189 CHASE domain VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 SMART SM01079 47 223 2.5E-34 T 14-10-2018 IPR006189 CHASE domain VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 SMART SM00267 283 457 5.8E-50 T 14-10-2018 IPR000160 GGDEF domain VAB027_1165 95d300ef9d9316e2a54fd7875e46a219 457 SUPERFAMILY SSF55073 299 456 1.41E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_1207 f9f25f6b8fbf1c62bb88f401f1dbed8d 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 181 8.0E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAB027_1207 f9f25f6b8fbf1c62bb88f401f1dbed8d 244 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 8.0E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAB027_1207 f9f25f6b8fbf1c62bb88f401f1dbed8d 244 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 242 2.9E-25 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VAB027_1207 f9f25f6b8fbf1c62bb88f401f1dbed8d 244 Gene3D G3DSA:3.30.1150.10 148 243 5.1E-24 T 14-10-2018 VAB027_1207 f9f25f6b8fbf1c62bb88f401f1dbed8d 244 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 242 1.9E-25 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VAB027_1207 f9f25f6b8fbf1c62bb88f401f1dbed8d 244 SUPERFAMILY SSF74653 162 240 1.83E-24 T 14-10-2018 VAB027_903 021ec7494e152e2aede708ff03f94c38 500 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_903 021ec7494e152e2aede708ff03f94c38 500 Gene3D G3DSA:3.40.50.300 266 492 1.2E-46 T 14-10-2018 VAB027_903 021ec7494e152e2aede708ff03f94c38 500 Pfam PF00005 ABC transporter 270 423 4.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_903 021ec7494e152e2aede708ff03f94c38 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_903 021ec7494e152e2aede708ff03f94c38 500 Gene3D G3DSA:3.40.50.300 1 237 2.9E-58 T 14-10-2018 VAB027_903 021ec7494e152e2aede708ff03f94c38 500 SUPERFAMILY SSF52540 269 474 5.53E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_903 021ec7494e152e2aede708ff03f94c38 500 SUPERFAMILY SSF52540 5 224 2.15E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_903 021ec7494e152e2aede708ff03f94c38 500 SMART SM00382 278 472 4.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_903 021ec7494e152e2aede708ff03f94c38 500 SMART SM00382 30 219 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_903 021ec7494e152e2aede708ff03f94c38 500 Pfam PF00005 ABC transporter 21 170 1.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 SUPERFAMILY SSF51064 145 200 1.15E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 SUPERFAMILY SSF58014 46 144 7.32E-28 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 97 112 6.5E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 69 85 6.5E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 152 167 6.5E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 179 198 6.5E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 Gene3D G3DSA:3.90.20.20 37 143 3.3E-32 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.219 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 Pfam PF01025 GrpE 39 200 2.4E-54 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAB027_1496 11af5876a9be2dd9453b04c3cbfd69dc 200 Gene3D G3DSA:2.30.22.10 144 200 4.3E-26 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VAB027_535 3616114613457ae48d997f69dc237245 171 SUPERFAMILY SSF55729 3 161 7.27E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_535 3616114613457ae48d997f69dc237245 171 Gene3D G3DSA:3.40.630.30 26 150 7.1E-20 T 14-10-2018 VAB027_535 3616114613457ae48d997f69dc237245 171 Pfam PF13302 Acetyltransferase (GNAT) domain 3 148 6.7E-11 T 14-10-2018 IPR000182 GNAT domain VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.9E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 14-10-2018 VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site VAB027_1296 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_604 fd08d1e9462080d5a28d7db0f579c205 412 Gene3D G3DSA:3.30.70.270 232 411 8.4E-42 T 14-10-2018 VAB027_604 fd08d1e9462080d5a28d7db0f579c205 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 344 5.6E-24 T 14-10-2018 IPR000160 GGDEF domain VAB027_604 fd08d1e9462080d5a28d7db0f579c205 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 338 5.0E-21 T 14-10-2018 IPR000160 GGDEF domain VAB027_604 fd08d1e9462080d5a28d7db0f579c205 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 406 1.6E-5 T 14-10-2018 IPR000160 GGDEF domain VAB027_604 fd08d1e9462080d5a28d7db0f579c205 412 SMART SM00267 227 411 1.9E-30 T 14-10-2018 IPR000160 GGDEF domain VAB027_604 fd08d1e9462080d5a28d7db0f579c205 412 SUPERFAMILY SSF55073 243 410 6.04E-32 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 Gene3D G3DSA:2.10.70.20 149 197 1.1E-19 T 14-10-2018 VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 Gene3D G3DSA:3.10.610.10 33 146 2.6E-34 T 14-10-2018 VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 SUPERFAMILY SSF54523 35 196 9.42E-55 T 14-10-2018 VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 24 9.2E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 8.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 Pfam PF11612 Type II secretion system (T2SS), protein J 54 191 1.6E-39 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VAB027_166 8c30b9f45679209fb2b68b7817785c57 209 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 2 194 1.4E-99 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VAB027_2410 ab94f719ee9365cac41076284fbe0261 71 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 2 64 1.1E-11 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VAB027_2410 ab94f719ee9365cac41076284fbe0261 71 SUPERFAMILY SSF101801 2 63 4.84E-12 T 14-10-2018 IPR036429 SpoA-like superfamily VAB027_2410 ab94f719ee9365cac41076284fbe0261 71 Gene3D G3DSA:2.30.330.10 1 68 3.2E-13 T 14-10-2018 IPR036429 SpoA-like superfamily VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 SMART SM00052 272 525 5.1E-48 T 14-10-2018 IPR001633 EAL domain VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 SUPERFAMILY SSF141868 287 532 1.31E-61 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 Pfam PF00563 EAL domain 287 519 6.6E-60 T 14-10-2018 IPR001633 EAL domain VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 Gene3D G3DSA:3.40.50.2300 1 134 2.5E-29 T 14-10-2018 VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 SMART SM00448 5 117 4.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 Gene3D G3DSA:3.20.20.450 284 533 7.4E-63 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 Pfam PF00072 Response regulator receiver domain 7 117 7.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1768 b18b71ee473dedf2ded1826188b97c1d 533 SUPERFAMILY SSF52172 4 136 8.54E-29 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1829 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01380 SIS domain 124 252 4.4E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_1829 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF53697 93 277 5.87E-40 T 14-10-2018 VAB027_1829 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VAB027_1829 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:3.40.50.10490 94 277 8.2E-40 T 14-10-2018 VAB027_1829 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1829 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1739 ed426c7b9e3ef4355bba8928799961c1 145 PIRSF PIRSF006173 1 144 4.9E-65 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VAB027_1739 ed426c7b9e3ef4355bba8928799961c1 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 42.266 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VAB027_1739 ed426c7b9e3ef4355bba8928799961c1 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 4.4E-9 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 PIRSF PIRSF039144 1 112 2.2E-56 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 Gene3D G3DSA:3.30.70.120 1 112 2.3E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 52 75 7.1E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 23 41 7.1E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 83 103 7.1E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 2 17 7.1E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 SUPERFAMILY SSF54913 1 112 5.4E-46 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VAB027_3242 f0a5f4d07edca635e279700d6e82da6e 112 SMART SM00938 4 105 1.3E-69 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82693 41 137 8.79E-18 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:1.20.1640.10 503 1005 2.0E-242 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:1.20.1640.10 12 502 2.0E-242 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:3.30.70.1430 557 655 2.0E-242 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:3.30.2090.10 182 275 2.0E-242 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82693 138 324 7.32E-19 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82866 792 1012 8.11E-44 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:3.30.70.1430 40 805 2.0E-242 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:3.30.70.1440 656 855 2.0E-242 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:3.30.2090.10 707 797 2.0E-242 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82693 557 650 2.44E-5 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82714 708 790 6.8E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82866 295 495 2.49E-31 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 SUPERFAMILY SSF82714 187 269 9.68E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Gene3D G3DSA:3.30.70.1320 138 328 2.0E-242 T 14-10-2018 VAB027_2390 1870c5dea1315150d8a7ea39f70f06bb 1016 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.3E-159 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 Gene3D G3DSA:3.30.360.10 287 452 7.2E-115 T 14-10-2018 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.3E-46 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 Gene3D G3DSA:3.40.50.720 129 462 7.2E-115 T 14-10-2018 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 SUPERFAMILY SSF51735 128 304 5.83E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.4E-19 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 2.4E-19 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.4E-19 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.4E-19 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.4E-19 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 1.4E-117 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 SMART SM00846 127 288 2.9E-53 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 6.7E-21 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAB027_346 cf66fc7823452a2a05f0533cda4042b1 478 SUPERFAMILY SSF55347 288 451 3.02E-53 T 14-10-2018 VAB027_2802 2a5a6119c3cddd82625249017ee20f62 270 Gene3D G3DSA:1.25.40.10 166 266 5.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2802 2a5a6119c3cddd82625249017ee20f62 270 Pfam PF13369 Transglutaminase-like superfamily 34 184 9.7E-45 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VAB027_2802 2a5a6119c3cddd82625249017ee20f62 270 SUPERFAMILY SSF48452 190 256 7.59E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2802 2a5a6119c3cddd82625249017ee20f62 270 Pfam PF13371 Tetratricopeptide repeat 187 259 7.0E-23 T 14-10-2018 VAB027_2958 6f1682438b309c8ca57f060009da70b0 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2958 6f1682438b309c8ca57f060009da70b0 304 Pfam PF03466 LysR substrate binding domain 90 294 8.0E-49 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2958 6f1682438b309c8ca57f060009da70b0 304 SUPERFAMILY SSF46785 3 82 4.15E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2958 6f1682438b309c8ca57f060009da70b0 304 SUPERFAMILY SSF53850 92 298 1.57E-41 T 14-10-2018 VAB027_2958 6f1682438b309c8ca57f060009da70b0 304 Gene3D G3DSA:1.10.10.10 4 93 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2958 6f1682438b309c8ca57f060009da70b0 304 Gene3D G3DSA:3.40.190.290 94 298 1.5E-37 T 14-10-2018 VAB027_1718 0b07d02ba9ce49b36d561a1b04797409 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.545 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VAB027_1718 0b07d02ba9ce49b36d561a1b04797409 358 Gene3D G3DSA:3.40.50.300 80 335 1.8E-84 T 14-10-2018 VAB027_1718 0b07d02ba9ce49b36d561a1b04797409 358 SUPERFAMILY SSF52540 88 321 1.2E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1718 0b07d02ba9ce49b36d561a1b04797409 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 7.0E-100 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VAB027_1718 0b07d02ba9ce49b36d561a1b04797409 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 VAB027_2620 64bd27a1956d6363fe5450b22e3a9f82 566 SUPERFAMILY SSF56801 13 553 4.84E-147 T 14-10-2018 VAB027_2620 64bd27a1956d6363fe5450b22e3a9f82 566 Pfam PF00501 AMP-binding enzyme 29 461 8.8E-106 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_2620 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.40.50.12780 10 457 1.4E-115 T 14-10-2018 VAB027_2620 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.30.300.310 458 559 2.7E-28 T 14-10-2018 VAB027_2620 64bd27a1956d6363fe5450b22e3a9f82 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_2620 64bd27a1956d6363fe5450b22e3a9f82 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.8E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 PIRSF PIRSF001365 1 298 2.0E-72 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 3.1E-50 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 SUPERFAMILY SSF51569 1 296 2.3E-73 T 14-10-2018 VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 SMART SM01130 3 294 1.5E-67 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.5E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.5E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 VAB027_2449 2dbd24b1d251e37252afc4731c8bdd02 298 Gene3D G3DSA:3.20.20.70 1 297 3.9E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_23 84185bee22b2367c54b530ed09b1d42b 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAB027_23 84185bee22b2367c54b530ed09b1d42b 200 Pfam PF01323 DSBA-like thioredoxin domain 41 187 9.0E-30 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VAB027_23 84185bee22b2367c54b530ed09b1d42b 200 PIRSF PIRSF001488 1 200 2.6E-75 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VAB027_23 84185bee22b2367c54b530ed09b1d42b 200 Gene3D G3DSA:3.40.30.10 17 200 1.8E-56 T 14-10-2018 VAB027_23 84185bee22b2367c54b530ed09b1d42b 200 SUPERFAMILY SSF52833 20 197 4.11E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3664 2fc7b95ab5eee70fe9f282f9611c8489 481 Gene3D G3DSA:3.30.1360.60 2 79 2.1E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_3664 2fc7b95ab5eee70fe9f282f9611c8489 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_3664 2fc7b95ab5eee70fe9f282f9611c8489 481 Pfam PF02378 Phosphotransferase system, EIIC 127 408 1.7E-30 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_3664 2fc7b95ab5eee70fe9f282f9611c8489 481 SUPERFAMILY SSF55604 9 80 3.79E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_3664 2fc7b95ab5eee70fe9f282f9611c8489 481 Pfam PF00367 phosphotransferase system, EIIB 11 43 2.3E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 1.4E-5 T 14-10-2018 VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 5.1E-70 T 14-10-2018 VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 SUPERFAMILY SSF51735 4 243 9.76E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.9E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.3E-102 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 Gene3D G3DSA:3.40.50.720 1 244 4.6E-93 T 14-10-2018 VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.3E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.3E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.3E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.3E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.3E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_2658 9ae4368037de61cadbb131d1d3f45d46 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.3E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_77 7441804f7c346f028a2ebc27ffae4fee 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.502 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VAB027_77 7441804f7c346f028a2ebc27ffae4fee 82 Pfam PF02416 mttA/Hcf106 family 4 54 6.4E-15 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VAB027_77 7441804f7c346f028a2ebc27ffae4fee 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.9E-22 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VAB027_3466 992ab39b5bc7a80e38a0b8582ea61702 100 Gene3D G3DSA:2.40.50.140 1 100 2.2E-29 T 14-10-2018 VAB027_3466 992ab39b5bc7a80e38a0b8582ea61702 100 Pfam PF00436 Single-strand binding protein family 3 88 1.2E-9 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VAB027_3466 992ab39b5bc7a80e38a0b8582ea61702 100 PIRSF PIRSF003135 1 100 3.0E-45 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VAB027_3466 992ab39b5bc7a80e38a0b8582ea61702 100 SUPERFAMILY SSF50249 1 99 2.6E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3466 992ab39b5bc7a80e38a0b8582ea61702 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 2.6E-32 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VAB027_3466 992ab39b5bc7a80e38a0b8582ea61702 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.221 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VAB027_554 b9e47d77506bd9fc72c3c232d9bcbb08 216 PIRSF PIRSF006320 1 216 9.2E-106 T 14-10-2018 IPR026041 Glyoxalase ElbB VAB027_554 b9e47d77506bd9fc72c3c232d9bcbb08 216 Gene3D G3DSA:3.40.50.880 1 216 7.5E-87 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_554 b9e47d77506bd9fc72c3c232d9bcbb08 216 SUPERFAMILY SSF52317 1 215 5.87E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2671 34910325f7fa64db50d6955074b7a168 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.2E-65 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VAB027_2671 34910325f7fa64db50d6955074b7a168 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 2.3E-67 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VAB027_227 ca7dc3f90c5bc3f84e446e7fda8a8d21 146 Pfam PF05656 Protein of unknown function (DUF805) 8 140 3.1E-22 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VAB027_665 b4bc45c5d008ac2b610b663d67e357b3 257 Pfam PF01636 Phosphotransferase enzyme family 90 162 2.5E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VAB027_665 b4bc45c5d008ac2b610b663d67e357b3 257 Gene3D G3DSA:3.90.1200.10 72 250 5.8E-12 T 14-10-2018 VAB027_665 b4bc45c5d008ac2b610b663d67e357b3 257 SUPERFAMILY SSF56112 1 242 2.04E-27 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_408 7328bdb7696c085e303a15cb2a9007e0 244 SUPERFAMILY SSF46689 8 86 1.85E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_408 7328bdb7696c085e303a15cb2a9007e0 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_408 7328bdb7696c085e303a15cb2a9007e0 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_408 7328bdb7696c085e303a15cb2a9007e0 244 Gene3D G3DSA:1.10.357.10 2 199 1.4E-22 T 14-10-2018 VAB027_408 7328bdb7696c085e303a15cb2a9007e0 244 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 3.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3127 504d75020b507ebfe1f20218d7b98783 241 Pfam PF13525 Outer membrane lipoprotein 26 235 1.2E-81 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VAB027_3127 504d75020b507ebfe1f20218d7b98783 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 1.2E-79 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VAB027_3127 504d75020b507ebfe1f20218d7b98783 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 38.356 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VAB027_3127 504d75020b507ebfe1f20218d7b98783 241 SUPERFAMILY SSF48452 24 119 4.14E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3127 504d75020b507ebfe1f20218d7b98783 241 Gene3D G3DSA:1.25.40.10 28 240 1.0E-54 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 Gene3D G3DSA:1.10.10.10 1 92 5.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 SUPERFAMILY SSF46785 1 112 1.03E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 SUPERFAMILY SSF53850 89 296 9.59E-40 T 14-10-2018 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 Gene3D G3DSA:3.40.190.10 93 290 7.7E-74 T 14-10-2018 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 Gene3D G3DSA:3.40.190.10 163 267 7.7E-74 T 14-10-2018 VAB027_2351 ebe16246d18c8908adaef027e1b97e8a 305 Pfam PF03466 LysR substrate binding domain 89 293 5.8E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_495 1c058b569b611b784daec464c79bf257 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 4.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_495 1c058b569b611b784daec464c79bf257 208 SMART SM00421 144 201 3.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_495 1c058b569b611b784daec464c79bf257 208 Gene3D G3DSA:3.40.50.12740 3 205 3.2E-66 T 14-10-2018 VAB027_495 1c058b569b611b784daec464c79bf257 208 SUPERFAMILY SSF46894 130 203 3.1E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_495 1c058b569b611b784daec464c79bf257 208 Pfam PF00072 Response regulator receiver domain 5 116 4.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_495 1c058b569b611b784daec464c79bf257 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_495 1c058b569b611b784daec464c79bf257 208 SMART SM00448 3 116 2.7E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_495 1c058b569b611b784daec464c79bf257 208 SUPERFAMILY SSF52172 2 135 1.85E-36 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_495 1c058b569b611b784daec464c79bf257 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_495 1c058b569b611b784daec464c79bf257 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_495 1c058b569b611b784daec464c79bf257 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1048 055b631da9ef0e184d5842aa9f2bb3c6 556 SUPERFAMILY SSF63848 279 310 2.88E-5 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VAB027_1048 055b631da9ef0e184d5842aa9f2bb3c6 556 Pfam PF03961 Flagellar Assembly Protein A 81 543 6.3E-121 T 14-10-2018 IPR005646 Flagellar assembly protein A VAB027_3765 de68a98384b6766251268e835fd62b5e 248 SUPERFAMILY SSF53850 1 246 6.21E-59 T 14-10-2018 VAB027_3765 de68a98384b6766251268e835fd62b5e 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VAB027_3765 de68a98384b6766251268e835fd62b5e 248 SMART SM00062 24 245 1.8E-72 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_3765 de68a98384b6766251268e835fd62b5e 248 Gene3D G3DSA:3.40.190.10 91 203 4.6E-28 T 14-10-2018 VAB027_3765 de68a98384b6766251268e835fd62b5e 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 3.2E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.5E-100 T 14-10-2018 VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 SUPERFAMILY SSF56219 1 268 1.7E-86 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.5E-20 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 268 2.3E-86 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 Gene3D G3DSA:3.60.10.10 1 268 4.8E-81 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAB027_2503 9d3fe8570f8234429e0b3a350c1ddd57 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 VAB027_533 a751e3b122187572f30e9dacba21acaf 116 Pfam PF06942 GlpM protein 6 112 3.4E-50 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC VAB027_533 a751e3b122187572f30e9dacba21acaf 116 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 22 112 3.0E-37 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC VAB027_3413 147e72d6be8a9406791576416b4b1aba 162 PIRSF PIRSF018472 1 162 1.2E-42 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VAB027_3413 147e72d6be8a9406791576416b4b1aba 162 Pfam PF04093 rod shape-determining protein MreD 7 154 9.7E-45 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VAB027_3413 147e72d6be8a9406791576416b4b1aba 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.9E-36 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VAB027_578 ba8fb1a1f57ee7db7b72a526204a5ffc 203 SUPERFAMILY SSF47616 81 203 3.48E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAB027_578 ba8fb1a1f57ee7db7b72a526204a5ffc 203 Gene3D G3DSA:3.40.30.10 4 201 1.2E-55 T 14-10-2018 VAB027_578 ba8fb1a1f57ee7db7b72a526204a5ffc 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 194 3.8E-11 T 14-10-2018 VAB027_578 ba8fb1a1f57ee7db7b72a526204a5ffc 203 Gene3D G3DSA:1.20.1050.10 83 199 1.2E-55 T 14-10-2018 VAB027_578 ba8fb1a1f57ee7db7b72a526204a5ffc 203 SUPERFAMILY SSF52833 1 86 8.82E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_578 ba8fb1a1f57ee7db7b72a526204a5ffc 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 8.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAB027_2740 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 SUPERFAMILY SSF46785 5 134 1.43E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2740 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Gene3D G3DSA:3.30.1490.190 85 142 4.7E-23 T 14-10-2018 VAB027_2740 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Gene3D G3DSA:1.10.10.10 1 84 3.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2740 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Pfam PF01475 Ferric uptake regulator family 11 130 7.6E-47 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VAB027_3070 8bc0260a15d1f4ebba4655a1339a450a 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 201 1.8E-50 T 14-10-2018 IPR016476 SH3 domain protein VAB027_3070 8bc0260a15d1f4ebba4655a1339a450a 202 PIRSF PIRSF006158 1 202 3.9E-66 T 14-10-2018 IPR016476 SH3 domain protein VAB027_3070 8bc0260a15d1f4ebba4655a1339a450a 202 SMART SM00287 19 85 1.7E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VAB027_3070 8bc0260a15d1f4ebba4655a1339a450a 202 Gene3D G3DSA:2.30.30.40 26 84 5.7E-9 T 14-10-2018 VAB027_3070 8bc0260a15d1f4ebba4655a1339a450a 202 Pfam PF08239 Bacterial SH3 domain 31 81 1.3E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VAB027_976 42cb5ff6f4f2fce3f9c2b4b993e24a16 252 Pfam PF07238 PilZ domain 134 237 3.2E-12 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VAB027_976 42cb5ff6f4f2fce3f9c2b4b993e24a16 252 SUPERFAMILY SSF141371 138 246 8.44E-32 T 14-10-2018 VAB027_976 42cb5ff6f4f2fce3f9c2b4b993e24a16 252 SUPERFAMILY SSF141371 24 137 5.1E-33 T 14-10-2018 VAB027_976 42cb5ff6f4f2fce3f9c2b4b993e24a16 252 Gene3D G3DSA:2.40.10.220 137 252 1.4E-44 T 14-10-2018 VAB027_976 42cb5ff6f4f2fce3f9c2b4b993e24a16 252 Gene3D G3DSA:2.30.110.10 23 136 3.9E-49 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAB027_976 42cb5ff6f4f2fce3f9c2b4b993e24a16 252 Pfam PF12945 Flagellar protein YcgR 40 127 7.1E-15 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VAB027_127 c32dbb7bc1fed287ba0e0a9d8a5a3d44 330 PIRSF PIRSF003097 31 326 2.1E-63 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VAB027_127 c32dbb7bc1fed287ba0e0a9d8a5a3d44 330 Gene3D G3DSA:3.30.70.3040 97 187 9.4E-6 T 14-10-2018 VAB027_701 f3c20540e1c68d6f1abf81e4268f4fe1 100 SUPERFAMILY SSF143011 1 90 4.71E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_701 f3c20540e1c68d6f1abf81e4268f4fe1 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 87 1.8E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_701 f3c20540e1c68d6f1abf81e4268f4fe1 100 Gene3D G3DSA:3.30.2310.20 1 96 1.3E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_701 f3c20540e1c68d6f1abf81e4268f4fe1 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 2.1E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_768 21d2b569d58a53911ec0d73c4094e0ea 320 Gene3D G3DSA:1.10.150.130 1 94 4.5E-31 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_768 21d2b569d58a53911ec0d73c4094e0ea 320 Pfam PF00589 Phage integrase family 105 307 1.3E-45 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_768 21d2b569d58a53911ec0d73c4094e0ea 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 4.1E-26 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAB027_768 21d2b569d58a53911ec0d73c4094e0ea 320 SUPERFAMILY SSF56349 11 307 2.24E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_768 21d2b569d58a53911ec0d73c4094e0ea 320 Gene3D G3DSA:1.10.443.10 95 310 1.1E-76 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_768 21d2b569d58a53911ec0d73c4094e0ea 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 3.2E-158 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VAB027_1144 56dbe808074ac2f90775996325335e0a 378 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 378 72.104 T 14-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 VAB027_1144 56dbe808074ac2f90775996325335e0a 378 PIRSF PIRSF000138 2 378 1.8E-121 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VAB027_1144 56dbe808074ac2f90775996325335e0a 378 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VAB027_1144 56dbe808074ac2f90775996325335e0a 378 SUPERFAMILY SSF51395 7 375 8.55E-99 T 14-10-2018 VAB027_1144 56dbe808074ac2f90775996325335e0a 378 Gene3D G3DSA:3.20.20.70 2 378 2.6E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1144 56dbe808074ac2f90775996325335e0a 378 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.2E-126 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VAB027_1436 57febb14d22156ef794e29f4a48de7f0 230 SUPERFAMILY SSF56214 111 194 5.23E-14 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAB027_1436 57febb14d22156ef794e29f4a48de7f0 230 PRINTS PR01399 Enterobactin synthetase component D signature 48 68 1.5E-9 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VAB027_1436 57febb14d22156ef794e29f4a48de7f0 230 PRINTS PR01399 Enterobactin synthetase component D signature 154 170 1.5E-9 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VAB027_1436 57febb14d22156ef794e29f4a48de7f0 230 Gene3D G3DSA:3.90.470.20 28 131 2.7E-6 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAB027_1436 57febb14d22156ef794e29f4a48de7f0 230 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 198 1.9E-12 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAB027_3047 1fa0e874abed83bbf0a5fde08d1b3384 181 SMART SM00644 16 167 2.0E-59 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAB027_3047 1fa0e874abed83bbf0a5fde08d1b3384 181 Gene3D G3DSA:3.40.80.10 2 181 3.1E-56 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAB027_3047 1fa0e874abed83bbf0a5fde08d1b3384 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 3.7E-28 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAB027_3047 1fa0e874abed83bbf0a5fde08d1b3384 181 SUPERFAMILY SSF55846 2 179 7.2E-66 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAB027_1567 c5f9410d4b9120977851698f3f20e2ce 89 SUPERFAMILY SSF88697 5 77 1.56E-15 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_1567 c5f9410d4b9120977851698f3f20e2ce 89 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 7 80 4.1E-21 T 14-10-2018 IPR039440 Domain of unknown function DUF3850 VAB027_1567 c5f9410d4b9120977851698f3f20e2ce 89 Gene3D G3DSA:2.30.130.30 1 83 9.2E-24 T 14-10-2018 VAB027_1273 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:2.40.50.620 32 96 8.3E-16 T 14-10-2018 VAB027_1273 ef0477152603af29d9249d90f937916d 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site VAB027_1273 ef0477152603af29d9249d90f937916d 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 3.6E-95 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1273 ef0477152603af29d9249d90f937916d 209 SUPERFAMILY SSF50447 1 208 2.38E-84 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAB027_1273 ef0477152603af29d9249d90f937916d 209 Pfam PF00297 Ribosomal protein L3 67 182 1.0E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1273 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:2.40.30.10 130 209 5.7E-20 T 14-10-2018 VAB027_1273 ef0477152603af29d9249d90f937916d 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.541 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_988 60143ad331689534326a44b2ddc07c24 521 SUPERFAMILY SSF58104 212 520 3.92E-57 T 14-10-2018 VAB027_988 60143ad331689534326a44b2ddc07c24 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 477 1.4E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_988 60143ad331689534326a44b2ddc07c24 521 Gene3D G3DSA:1.10.287.950 190 520 7.8E-54 T 14-10-2018 VAB027_988 60143ad331689534326a44b2ddc07c24 521 SMART SM00283 259 520 8.5E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_988 60143ad331689534326a44b2ddc07c24 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 6.9E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_988 60143ad331689534326a44b2ddc07c24 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 6.9E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_988 60143ad331689534326a44b2ddc07c24 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 6.9E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_988 60143ad331689534326a44b2ddc07c24 521 SMART SM00304 190 244 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_103 eb439e7ecb4d3d23a16e68d8355a59c7 255 Gene3D G3DSA:3.40.50.10090 32 161 3.7E-67 T 14-10-2018 VAB027_103 eb439e7ecb4d3d23a16e68d8355a59c7 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 8.7E-33 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_103 eb439e7ecb4d3d23a16e68d8355a59c7 255 Gene3D G3DSA:3.40.50.10090 4 240 3.7E-67 T 14-10-2018 VAB027_103 eb439e7ecb4d3d23a16e68d8355a59c7 255 SUPERFAMILY SSF69618 1 241 2.22E-49 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 SMART SM00342 221 304 2.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 SUPERFAMILY SSF52317 4 183 5.86E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 SUPERFAMILY SSF46689 257 308 2.06E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 Gene3D G3DSA:1.10.10.60 205 310 2.9E-27 T 14-10-2018 VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 Gene3D G3DSA:3.40.50.880 1 193 9.8E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 Pfam PF01965 DJ-1/PfpI family 59 167 1.6E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 Pfam PF12833 Helix-turn-helix domain 227 306 2.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1077 01fcffd90faf4675a55432376d7ab0e5 313 SUPERFAMILY SSF46689 204 255 3.05E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 Gene3D G3DSA:3.40.47.10 4 267 4.3E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 SUPERFAMILY SSF53901 1 258 1.15E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 PIRSF PIRSF000429 1 387 8.4E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 7.3E-83 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 SUPERFAMILY SSF53901 263 386 1.2E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.2E-49 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.9E-143 T 14-10-2018 IPR002155 Thiolase GO:0016747 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.064 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 Gene3D G3DSA:3.40.47.10 127 381 4.3E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VAB027_3713 8b14570d7d8c6127fd1adcc40bfe9f4c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 4 387 9.9E-236 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAB027_2637 b9ef5666b9ba80d9ae939a1dfe412d5b 272 PIRSF PIRSF018249 1 272 5.2E-84 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VAB027_2637 b9ef5666b9ba80d9ae939a1dfe412d5b 272 Gene3D G3DSA:3.40.50.150 1 272 2.2E-77 T 14-10-2018 VAB027_2637 b9ef5666b9ba80d9ae939a1dfe412d5b 272 Pfam PF13649 Methyltransferase domain 90 161 5.2E-11 T 14-10-2018 VAB027_2637 b9ef5666b9ba80d9ae939a1dfe412d5b 272 SUPERFAMILY SSF53335 5 254 4.0E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_897 40473ed8e95c6ba67cf961159ae78b5c 243 Pfam PF01048 Phosphorylase superfamily 15 197 6.7E-33 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAB027_897 40473ed8e95c6ba67cf961159ae78b5c 243 Gene3D G3DSA:3.40.50.1580 4 240 1.8E-69 T 14-10-2018 VAB027_897 40473ed8e95c6ba67cf961159ae78b5c 243 SUPERFAMILY SSF53167 5 217 4.32E-61 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAB027_3062 b08079bac4f6d47416a298de21506a9e 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 431 1.1E-108 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VAB027_3062 b08079bac4f6d47416a298de21506a9e 436 SUPERFAMILY SSF56954 1 423 1.01E-90 T 14-10-2018 VAB027_3062 b08079bac4f6d47416a298de21506a9e 436 Pfam PF02321 Outer membrane efflux protein 25 207 3.3E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_3062 b08079bac4f6d47416a298de21506a9e 436 Pfam PF02321 Outer membrane efflux protein 231 417 2.5E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_3062 b08079bac4f6d47416a298de21506a9e 436 Gene3D G3DSA:1.20.1600.10 23 435 9.1E-119 T 14-10-2018 VAB027_873 6247f975bf6b1e607aedeadffe09e099 70 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 2.0E-13 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VAB027_873 6247f975bf6b1e607aedeadffe09e099 70 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 1.3E-31 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Gene3D G3DSA:1.10.8.60 318 426 5.1E-41 T 14-10-2018 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 14-10-2018 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.26 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Gene3D G3DSA:3.30.50.30 2 53 2.7E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 6.5E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 SMART SM01086 319 414 9.0E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 5.0E-210 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VAB027_2565 f004306cd6c6fff78eafdecb29f324f5 426 SUPERFAMILY SSF52540 65 404 2.06E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3245 064f066cb4a8ec1f07f6c40091b83c8e 715 Pfam PF01734 Patatin-like phospholipase 1 179 4.2E-22 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VAB027_3245 064f066cb4a8ec1f07f6c40091b83c8e 715 Gene3D G3DSA:3.10.20.310 295 370 3.3E-8 T 14-10-2018 VAB027_3245 064f066cb4a8ec1f07f6c40091b83c8e 715 SUPERFAMILY SSF52151 2 273 1.36E-46 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAB027_3245 064f066cb4a8ec1f07f6c40091b83c8e 715 Gene3D G3DSA:3.40.1090.10 86 233 1.4E-18 T 14-10-2018 VAB027_3245 064f066cb4a8ec1f07f6c40091b83c8e 715 Gene3D G3DSA:3.40.1090.10 1 78 9.5E-15 T 14-10-2018 VAB027_3245 064f066cb4a8ec1f07f6c40091b83c8e 715 Pfam PF07244 Surface antigen variable number repeat 299 369 4.9E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAB027_2003 ff10e476f6af1a1068f2662f4f375c6d 226 PRINTS PR00169 Potassium channel signature 164 186 3.3E-5 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VAB027_2003 ff10e476f6af1a1068f2662f4f375c6d 226 PRINTS PR00169 Potassium channel signature 193 219 3.3E-5 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VAB027_2003 ff10e476f6af1a1068f2662f4f375c6d 226 PRINTS PR00169 Potassium channel signature 126 149 3.3E-5 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VAB027_2003 ff10e476f6af1a1068f2662f4f375c6d 226 SUPERFAMILY SSF81324 125 217 2.88E-18 T 14-10-2018 VAB027_2003 ff10e476f6af1a1068f2662f4f375c6d 226 Pfam PF07885 Ion channel 134 217 1.6E-16 T 14-10-2018 IPR013099 Potassium channel domain VAB027_2003 ff10e476f6af1a1068f2662f4f375c6d 226 Gene3D G3DSA:1.10.287.70 124 224 6.6E-20 T 14-10-2018 VAB027_2528 da3f754272bb1969fb3d3cbfae69a3af 402 Pfam PF12704 MacB-like periplasmic core domain 29 208 1.0E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VAB027_2528 da3f754272bb1969fb3d3cbfae69a3af 402 Pfam PF02687 FtsX-like permease family 296 395 2.0E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_2528 da3f754272bb1969fb3d3cbfae69a3af 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 8.0E-132 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 PIRSF PIRSF006160 1 162 3.2E-66 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 Gene3D G3DSA:3.30.1360.80 1 172 1.9E-73 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 2.0E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 SUPERFAMILY SSF63411 4 162 1.47E-65 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.326 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3286 8e7a5d270231c144832eea4aca1b0e85 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 7.0E-84 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_1352 8657c9c8599e3dea4a8c0618a79ff3df 129 SUPERFAMILY SSF55298 2 128 1.32E-43 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAB027_1352 8657c9c8599e3dea4a8c0618a79ff3df 129 Gene3D G3DSA:3.30.1330.40 2 129 1.1E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAB027_1352 8657c9c8599e3dea4a8c0618a79ff3df 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.7E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAB027_1352 8657c9c8599e3dea4a8c0618a79ff3df 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VAB027_1352 8657c9c8599e3dea4a8c0618a79ff3df 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 5.8E-52 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 277 3.6E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 Gene3D G3DSA:2.40.420.20 290 357 4.6E-46 T 14-10-2018 VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 358 1.1E-43 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 Gene3D G3DSA:2.40.30.170 71 289 4.6E-46 T 14-10-2018 VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 SUPERFAMILY SSF111369 71 284 2.22E-27 T 14-10-2018 VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 Gene3D G3DSA:1.10.287.470 116 175 4.6E-46 T 14-10-2018 VAB027_3221 16264c51f7ffe551272d76d7b1c79b1a 366 Gene3D G3DSA:2.40.50.100 81 209 4.6E-46 T 14-10-2018 VAB027_2933 23172cedd88fc53dcc3adf6afb7685b7 415 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 4.6E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VAB027_2933 23172cedd88fc53dcc3adf6afb7685b7 415 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.526 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VAB027_2933 23172cedd88fc53dcc3adf6afb7685b7 415 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.7E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VAB027_2933 23172cedd88fc53dcc3adf6afb7685b7 415 PIRSF PIRSF016055 1 414 3.5E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VAB027_1070 558a5843fbf6102678f961de43c085b6 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.741 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_1070 558a5843fbf6102678f961de43c085b6 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 1.5E-77 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_1070 558a5843fbf6102678f961de43c085b6 218 SUPERFAMILY SSF55821 10 213 2.52E-82 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAB027_1070 558a5843fbf6102678f961de43c085b6 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 2.1E-80 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAB027_1070 558a5843fbf6102678f961de43c085b6 218 Gene3D G3DSA:3.90.870.10 6 218 2.7E-91 T 14-10-2018 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 SMART SM00283 271 532 1.5E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 SMART SM00304 203 256 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 497 1.7E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 Gene3D G3DSA:1.10.287.950 203 534 2.2E-63 T 14-10-2018 VAB027_1974 b2d9840b7405e75beaf98806a23a0dc4 543 SUPERFAMILY SSF58104 224 537 1.96E-63 T 14-10-2018 VAB027_2643 e5440c7c5743c7cb50588bec8f39aa4e 385 SUPERFAMILY SSF52151 25 265 7.85E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAB027_2643 e5440c7c5743c7cb50588bec8f39aa4e 385 Gene3D G3DSA:3.40.1090.10 122 223 1.5E-7 T 14-10-2018 VAB027_2643 e5440c7c5743c7cb50588bec8f39aa4e 385 Gene3D G3DSA:3.40.1090.10 13 121 8.5E-8 T 14-10-2018 VAB027_2643 e5440c7c5743c7cb50588bec8f39aa4e 385 Pfam PF01734 Patatin-like phospholipase 29 198 6.8E-21 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VAB027_2777 782bcc93098c03c69f070a32433afca6 302 SUPERFAMILY SSF54909 2 297 1.72E-97 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_2777 782bcc93098c03c69f070a32433afca6 302 Pfam PF04261 Dyp-type peroxidase family 5 293 1.6E-95 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VAB027_2777 782bcc93098c03c69f070a32433afca6 302 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 1.7E-89 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VAB027_3049 2550a6e1c239637fbf7ca38dcf8b0408 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 9.7E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3049 2550a6e1c239637fbf7ca38dcf8b0408 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 3.1E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3049 2550a6e1c239637fbf7ca38dcf8b0408 156 Gene3D G3DSA:3.30.700.10 12 140 5.1E-27 T 14-10-2018 VAB027_3049 2550a6e1c239637fbf7ca38dcf8b0408 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3049 2550a6e1c239637fbf7ca38dcf8b0408 156 SUPERFAMILY SSF54523 12 127 5.1E-24 T 14-10-2018 VAB027_3049 2550a6e1c239637fbf7ca38dcf8b0408 156 Pfam PF00114 Pilin (bacterial filament) 40 138 5.7E-7 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VAB027_1586 f674b5124093b46c5bef623e25d51a0e 170 Gene3D G3DSA:2.60.120.1120 7 158 6.2E-57 T 14-10-2018 IPR038681 Sf6-type phage tail needle knob superfamily VAB027_1586 f674b5124093b46c5bef623e25d51a0e 170 Pfam PF16532 Sf6-type phage tail needle knob or tip of some Caudovirales 14 158 3.3E-29 T 14-10-2018 IPR032395 Sf6-type phage tail needle knob VAB027_1287 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1370.30 2 72 1.4E-26 T 14-10-2018 VAB027_1287 ae1a8c36dede30f90c9f333e24a65300 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.287 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1287 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1490.10 73 130 3.9E-25 T 14-10-2018 VAB027_1287 ae1a8c36dede30f90c9f333e24a65300 130 SUPERFAMILY SSF56047 2 129 2.35E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1287 ae1a8c36dede30f90c9f333e24a65300 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1287 ae1a8c36dede30f90c9f333e24a65300 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1093 a6ff3db4d0fcdaa7f50036878f9343da 265 Gene3D G3DSA:1.10.3720.10 46 260 2.6E-52 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1093 a6ff3db4d0fcdaa7f50036878f9343da 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 258 7.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1093 a6ff3db4d0fcdaa7f50036878f9343da 265 SUPERFAMILY SSF161098 58 245 1.19E-42 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1093 a6ff3db4d0fcdaa7f50036878f9343da 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 2.8E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 PRINTS PR00175 Sodium/alanine symporter signature 217 236 3.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 PRINTS PR00175 Sodium/alanine symporter signature 365 387 3.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 PRINTS PR00175 Sodium/alanine symporter signature 304 322 3.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 PRINTS PR00175 Sodium/alanine symporter signature 189 207 3.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 PRINTS PR00175 Sodium/alanine symporter signature 428 448 3.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.3E-134 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_1437 8e7ef5e7ce11f803041bef2ebbfd2cf4 516 Pfam PF01235 Sodium:alanine symporter family 50 472 6.9E-148 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAB027_2376 77bc099d79c96f612d48db0c9ef676c2 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 1.6E-86 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VAB027_2376 77bc099d79c96f612d48db0c9ef676c2 243 SUPERFAMILY SSF55729 4 232 2.01E-85 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_2376 77bc099d79c96f612d48db0c9ef676c2 243 Gene3D G3DSA:2.30.210.20 4 63 6.0E-25 T 14-10-2018 VAB027_2376 77bc099d79c96f612d48db0c9ef676c2 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 87.695 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VAB027_2376 77bc099d79c96f612d48db0c9ef676c2 243 Gene3D G3DSA:3.40.630.70 64 241 2.3E-60 T 14-10-2018 VAB027_2376 77bc099d79c96f612d48db0c9ef676c2 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.4E-66 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VAB027_1691 f0a24ee783235d353c6369bcebe422ca 224 SUPERFAMILY SSF53098 10 208 2.55E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1691 f0a24ee783235d353c6369bcebe422ca 224 Gene3D G3DSA:3.30.420.10 9 216 1.6E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1691 f0a24ee783235d353c6369bcebe422ca 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 5.1E-99 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VAB027_1691 f0a24ee783235d353c6369bcebe422ca 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 118.692 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VAB027_1691 f0a24ee783235d353c6369bcebe422ca 224 Pfam PF00929 Exonuclease 20 195 2.9E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_1691 f0a24ee783235d353c6369bcebe422ca 224 SMART SM00479 18 204 6.4E-32 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_294 6ada755982babe48d5e619ac0b10e7d0 579 Pfam PF09327 Domain of unknown function (DUF1983) 280 357 8.4E-16 T 14-10-2018 IPR015406 Domain of unknown function DUF1983 VAB027_3475 2559336e195052aaa98a1de7b5c1799f 118 Pfam PF02635 DsrE/DsrF-like family 3 118 8.9E-26 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VAB027_3475 2559336e195052aaa98a1de7b5c1799f 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.6E-46 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF VAB027_3475 2559336e195052aaa98a1de7b5c1799f 118 SUPERFAMILY SSF75169 2 118 9.29E-37 T 14-10-2018 IPR027396 DsrEFH-like VAB027_3475 2559336e195052aaa98a1de7b5c1799f 118 Gene3D G3DSA:3.40.1260.10 1 118 3.0E-36 T 14-10-2018 IPR027396 DsrEFH-like VAB027_1313 083f5138aa51a9f1d1aafdd096d846a0 173 Gene3D G3DSA:2.40.50.870 32 173 3.8E-46 T 14-10-2018 VAB027_1313 083f5138aa51a9f1d1aafdd096d846a0 173 Pfam PF11736 Protein of unknown function (DUF3299) 38 168 5.4E-44 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 VAB027_2691 8a78adcaa79324bf504bc9ed077ffd7c 160 Gene3D G3DSA:2.40.50.140 30 141 3.1E-40 T 14-10-2018 VAB027_2691 8a78adcaa79324bf504bc9ed077ffd7c 160 Pfam PF03100 CcmE 4 135 1.0E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VAB027_2691 8a78adcaa79324bf504bc9ed077ffd7c 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.2 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VAB027_2691 8a78adcaa79324bf504bc9ed077ffd7c 160 SUPERFAMILY SSF82093 30 141 5.23E-39 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 9.5E-76 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 Pfam PF02441 Flavoprotein 7 178 2.6E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 SUPERFAMILY SSF102645 184 398 1.44E-81 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 Gene3D G3DSA:3.40.50.1950 1 184 4.8E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 SUPERFAMILY SSF52507 1 181 2.09E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 Gene3D G3DSA:3.40.50.10300 185 399 1.6E-84 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VAB027_3635 972302a0ae9d9495bd68aa1ece18f9c9 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 5.2E-152 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VAB027_169 439bd07eece1b07377d6f5245b0b86db 165 Pfam PF04612 Type II secretion system (T2SS), protein M 6 163 9.5E-55 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VAB027_169 439bd07eece1b07377d6f5245b0b86db 165 SUPERFAMILY SSF103054 86 164 3.53E-23 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VAB027_169 439bd07eece1b07377d6f5245b0b86db 165 PIRSF PIRSF006291 2 164 2.7E-41 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VAB027_169 439bd07eece1b07377d6f5245b0b86db 165 Gene3D G3DSA:3.30.1360.100 86 165 3.5E-35 T 14-10-2018 VAB027_972 3278f79a8a86fa3c736c1991baf5409d 495 Gene3D G3DSA:1.25.40.10 18 169 2.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_972 3278f79a8a86fa3c736c1991baf5409d 495 SUPERFAMILY SSF48452 124 314 9.16E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_972 3278f79a8a86fa3c736c1991baf5409d 495 Gene3D G3DSA:1.25.40.10 170 317 1.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_972 3278f79a8a86fa3c736c1991baf5409d 495 SMART SM00028 207 240 0.36 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_972 3278f79a8a86fa3c736c1991baf5409d 495 SMART SM00028 127 160 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_1709 c137dced03817ea558312f4aded6ca72 159 SUPERFAMILY SSF55040 11 155 1.09E-60 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_1709 c137dced03817ea558312f4aded6ca72 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.914 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_1709 c137dced03817ea558312f4aded6ca72 159 Pfam PF01967 MoaC family 15 150 1.4E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_1709 c137dced03817ea558312f4aded6ca72 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 9.3E-71 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_1709 c137dced03817ea558312f4aded6ca72 159 Gene3D G3DSA:3.30.70.640 1 159 4.7E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 Pfam PF04545 Sigma-70, region 4 139 186 6.7E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 SUPERFAMILY SSF88659 127 187 3.18E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 SUPERFAMILY SSF88946 7 118 1.75E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 Pfam PF04542 Sigma-70 region 2 33 99 3.9E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 Gene3D G3DSA:1.10.10.10 126 194 4.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 187 4.2E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAB027_2941 ad9ed7db1997f3c869de958c9ce2c382 194 Gene3D G3DSA:1.10.1740.10 14 96 2.0E-23 T 14-10-2018 VAB027_333 4660a824f3ef306b0ee8a309d8007fda 227 SUPERFAMILY SSF52540 1 219 2.46E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_333 4660a824f3ef306b0ee8a309d8007fda 227 SMART SM00382 30 215 1.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_333 4660a824f3ef306b0ee8a309d8007fda 227 Gene3D G3DSA:3.40.50.300 1 224 4.8E-61 T 14-10-2018 VAB027_333 4660a824f3ef306b0ee8a309d8007fda 227 Pfam PF00005 ABC transporter 21 169 4.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_333 4660a824f3ef306b0ee8a309d8007fda 227 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 6 249 2.5E-79 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 SMART SM00849 12 165 3.2E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 PIRSF PIRSF005457 1 249 4.6E-73 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 9.0E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 249 3.0E-19 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 Gene3D G3DSA:3.60.15.10 1 249 1.3E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 SUPERFAMILY SSF56281 2 249 3.67E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2230 04abd1a2d84ed3d7a5c04b2c974a1c9a 253 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 249 37.935 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAB027_3667 8321b51358065f03bd9b344c573e222a 653 Gene3D G3DSA:1.10.3470.10 1 327 4.8E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_3667 8321b51358065f03bd9b344c573e222a 653 SUPERFAMILY SSF81345 4 323 1.31E-55 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_3667 8321b51358065f03bd9b344c573e222a 653 Gene3D G3DSA:1.10.3470.10 332 651 2.4E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_3667 8321b51358065f03bd9b344c573e222a 653 Pfam PF01032 FecCD transport family 360 648 1.1E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_3667 8321b51358065f03bd9b344c573e222a 653 Pfam PF01032 FecCD transport family 13 323 8.6E-62 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_3667 8321b51358065f03bd9b344c573e222a 653 SUPERFAMILY SSF81345 337 648 3.4E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_3483 b187c5873115624e176430261af29f29 395 TIGRFAM TIGR01933 hflK: HflK protein 87 347 3.5E-125 T 14-10-2018 IPR010201 HflK GO:0016021 VAB027_3483 b187c5873115624e176430261af29f29 395 Gene3D G3DSA:3.30.479.30 115 247 8.6E-22 T 14-10-2018 VAB027_3483 b187c5873115624e176430261af29f29 395 SMART SM00244 85 245 1.1E-50 T 14-10-2018 IPR001107 Band 7 domain VAB027_3483 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 92 114 5.7E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_3483 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 139 160 5.7E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_3483 b187c5873115624e176430261af29f29 395 PRINTS PR00721 Stomatin signature 195 218 5.7E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VAB027_3483 b187c5873115624e176430261af29f29 395 SUPERFAMILY SSF117892 118 250 3.79E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VAB027_3483 b187c5873115624e176430261af29f29 395 Pfam PF01145 SPFH domain / Band 7 family 89 260 8.5E-30 T 14-10-2018 IPR001107 Band 7 domain VAB027_3483 b187c5873115624e176430261af29f29 395 Pfam PF12221 Bacterial membrane protein N terminal 1 56 1.8E-15 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 6.8E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 3.0E-173 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 Gene3D G3DSA:1.20.58.180 215 297 2.5E-34 T 14-10-2018 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 8.4E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 8.4E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 8.4E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 8.4E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 8.4E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 8.4E-71 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 61.938 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 SUPERFAMILY SSF55681 8 292 1.22E-133 T 14-10-2018 VAB027_10 70d60f38c944ea4d7b445a89c44e6600 305 Gene3D G3DSA:3.30.930.10 1 214 5.8E-110 T 14-10-2018 VAB027_3434 d039e5f1dbc2de3c196dc9023be7a4bb 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.537 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VAB027_3434 d039e5f1dbc2de3c196dc9023be7a4bb 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 1.0E-61 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VAB027_3434 d039e5f1dbc2de3c196dc9023be7a4bb 177 PIRSF PIRSF002070 2 174 3.8E-38 T 14-10-2018 VAB027_3434 d039e5f1dbc2de3c196dc9023be7a4bb 177 Gene3D G3DSA:2.40.50.140 2 148 1.2E-50 T 14-10-2018 VAB027_3434 d039e5f1dbc2de3c196dc9023be7a4bb 177 Pfam PF00436 Single-strand binding protein family 6 105 5.1E-43 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VAB027_3434 d039e5f1dbc2de3c196dc9023be7a4bb 177 SUPERFAMILY SSF50249 4 177 1.58E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_226 895aebceabdc74ab48724ac083cefbb9 116 Gene3D G3DSA:3.30.429.10 1 116 2.2E-33 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VAB027_226 895aebceabdc74ab48724ac083cefbb9 116 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 5.1E-6 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VAB027_226 895aebceabdc74ab48724ac083cefbb9 116 SUPERFAMILY SSF55331 2 115 1.83E-35 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VAB027_2384 bfaee1293945946195e3281dcb24fad6 93 Pfam PF07383 Protein of unknown function (DUF1496) 34 78 8.8E-22 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 VAB027_2606 55d2a5924bd9d6f52c2a47930274e33f 386 TIGRFAM TIGR00843 benE: benzoate transporter 9 377 4.0E-97 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 VAB027_2606 55d2a5924bd9d6f52c2a47930274e33f 386 Pfam PF03594 Benzoate membrane transport protein 5 379 2.3E-153 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 VAB027_2131 4fd7d061cc45f3d44f71373a4172d7e0 579 Pfam PF11949 Protein of unknown function (DUF3466) 273 579 3.0E-60 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VAB027_2131 4fd7d061cc45f3d44f71373a4172d7e0 579 Pfam PF11949 Protein of unknown function (DUF3466) 7 201 6.9E-7 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 SMART SM00116 96 144 9.8E-10 T 14-10-2018 IPR000644 CBS domain VAB027_1423 19e1b03e442c92490b029377bb23755b 487 SMART SM00116 158 206 3.9E-6 T 14-10-2018 IPR000644 CBS domain VAB027_1423 19e1b03e442c92490b029377bb23755b 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.1E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 SUPERFAMILY SSF54631 95 203 1.04E-24 T 14-10-2018 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 SMART SM01240 7 473 0.0 T 14-10-2018 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 82.988 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 Pfam PF00571 CBS domain 149 201 2.5E-4 T 14-10-2018 IPR000644 CBS domain VAB027_1423 19e1b03e442c92490b029377bb23755b 487 Pfam PF00571 CBS domain 95 140 3.1E-9 T 14-10-2018 IPR000644 CBS domain VAB027_1423 19e1b03e442c92490b029377bb23755b 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 PIRSF PIRSF000130 1 487 3.6E-199 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 Gene3D G3DSA:3.20.20.70 1 486 4.5E-209 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 SUPERFAMILY SSF51412 1 477 1.3E-122 T 14-10-2018 VAB027_1423 19e1b03e442c92490b029377bb23755b 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.7E-194 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF48179 496 604 6.29E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.1E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 53.442 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF52096 2 305 9.95E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:1.10.1040.50 498 710 5.6E-74 T 14-10-2018 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 208 1.7E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF48179 624 715 1.02E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.90.226.10 1 312 4.6E-90 T 14-10-2018 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF51735 313 496 5.01E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 4.9E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 1.8E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAB027_3712 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.40.50.720 314 497 6.5E-64 T 14-10-2018 VAB027_2579 3bae5f78ff9998c9797d68af0ad68a40 223 SUPERFAMILY SSF69593 8 208 6.28E-27 T 14-10-2018 VAB027_2579 3bae5f78ff9998c9797d68af0ad68a40 223 Pfam PF01553 Acyltransferase 27 157 2.3E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_2579 3bae5f78ff9998c9797d68af0ad68a40 223 SMART SM00563 38 160 5.8E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_2093 a6f409278470c3178e6b40af8ad8d6fc 212 PIRSF PIRSF006324 1 210 5.2E-54 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_2093 a6f409278470c3178e6b40af8ad8d6fc 212 Pfam PF01810 LysE type translocator 15 208 5.0E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 SUPERFAMILY SSF52821 2 139 5.5E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 Gene3D G3DSA:3.40.250.10 156 276 4.6E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 SUPERFAMILY SSF52821 157 276 3.93E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 Gene3D G3DSA:3.40.250.10 1 144 5.7E-43 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 Pfam PF00581 Rhodanese-like domain 7 124 1.5E-14 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 Pfam PF00581 Rhodanese-like domain 156 268 7.2E-8 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 SMART SM00450 153 273 3.0E-12 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_546 9479dc0acfbb6710be73fed698d8e087 276 SMART SM00450 6 129 1.8E-18 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_3439 b46b49e5156d5f18728fa44c3289ff93 372 SUPERFAMILY SSF53383 9 371 2.86E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_3439 b46b49e5156d5f18728fa44c3289ff93 372 Pfam PF00266 Aminotransferase class-V 13 338 2.8E-37 T 14-10-2018 IPR000192 Aminotransferase class V domain VAB027_3439 b46b49e5156d5f18728fa44c3289ff93 372 Gene3D G3DSA:3.90.1150.10 9 371 7.1E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_3439 b46b49e5156d5f18728fa44c3289ff93 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VAB027_3439 b46b49e5156d5f18728fa44c3289ff93 372 Gene3D G3DSA:3.40.640.10 22 269 7.1E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_3439 b46b49e5156d5f18728fa44c3289ff93 372 PIRSF PIRSF000524 5 372 7.4E-111 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VAB027_1759 d1ff0c3b2201cbfc5c4e853e73f45545 262 SMART SM00342 172 253 4.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1759 d1ff0c3b2201cbfc5c4e853e73f45545 262 Gene3D G3DSA:1.10.10.60 152 259 1.2E-21 T 14-10-2018 VAB027_1759 d1ff0c3b2201cbfc5c4e853e73f45545 262 SUPERFAMILY SSF46689 207 255 8.96E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1759 d1ff0c3b2201cbfc5c4e853e73f45545 262 Pfam PF12833 Helix-turn-helix domain 179 254 7.6E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_1759 d1ff0c3b2201cbfc5c4e853e73f45545 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAB027_330 111490042a1f0e5cebac0aff880560bf 690 Gene3D G3DSA:3.20.20.80 436 659 2.0E-37 T 14-10-2018 VAB027_330 111490042a1f0e5cebac0aff880560bf 690 SUPERFAMILY SSF51445 194 661 1.99E-89 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_330 111490042a1f0e5cebac0aff880560bf 690 Pfam PF00128 Alpha amylase, catalytic domain 243 611 1.7E-48 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_330 111490042a1f0e5cebac0aff880560bf 690 SMART SM00642 210 652 2.6E-94 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAB027_330 111490042a1f0e5cebac0aff880560bf 690 PIRSF PIRSF036917 1 690 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VAB027_330 111490042a1f0e5cebac0aff880560bf 690 Gene3D G3DSA:3.20.20.80 193 427 3.8E-54 T 14-10-2018 VAB027_3352 2a43808e07026741a70f46f1bf6f561f 162 Pfam PF17283 SprT-like zinc ribbon domain 121 159 2.0E-9 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain VAB027_3352 2a43808e07026741a70f46f1bf6f561f 162 SMART SM00731 12 161 1.7E-64 T 14-10-2018 IPR006640 SprT-like VAB027_3352 2a43808e07026741a70f46f1bf6f561f 162 Pfam PF10263 SprT-like family 16 115 3.8E-18 T 14-10-2018 IPR006640 SprT-like VAB027_3352 2a43808e07026741a70f46f1bf6f561f 162 Hamap MF_00746 Protein SprT [sprT]. 8 161 42.12 T 14-10-2018 IPR023483 Uncharacterised protein family SprT VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 Gene3D G3DSA:1.10.3720.10 5 263 3.2E-40 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 Gene3D G3DSA:1.10.3720.10 282 528 1.2E-25 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 SUPERFAMILY SSF161098 11 256 3.64E-40 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 11 517 4.0E-164 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 258 4.0E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 362 516 1.6E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1328 e21d9f456a719242c116a12e6f90727a 530 SUPERFAMILY SSF161098 277 522 2.62E-31 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3190 2e0d29be14a66d92b0b12554697f395c 135 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 127 4.0E-5 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_3190 2e0d29be14a66d92b0b12554697f395c 135 Gene3D G3DSA:3.40.50.10220 34 134 5.3E-28 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_3190 2e0d29be14a66d92b0b12554697f395c 135 Pfam PF03603 DNA polymerase III psi subunit 4 128 1.9E-33 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_3190 2e0d29be14a66d92b0b12554697f395c 135 SUPERFAMILY SSF102220 30 131 1.44E-29 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_3190 2e0d29be14a66d92b0b12554697f395c 135 PIRSF PIRSF029225 1 133 1.0E-45 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 Pfam PF03222 Tryptophan/tyrosine permease family 3 385 8.7E-111 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 Gene3D G3DSA:1.20.1740.10 3 398 1.0E-10 T 14-10-2018 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.1E-80 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VAB027_404 488e097c1d8a0293da55a8eeb72d97a2 400 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 376 3.9E-112 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAB027_1949 12ac57b526aa946d535bc8ba680ecb6c 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 329 4.3E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VAB027_1949 12ac57b526aa946d535bc8ba680ecb6c 364 Gene3D G3DSA:3.40.190.170 41 350 3.8E-116 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VAB027_1949 12ac57b526aa946d535bc8ba680ecb6c 364 Gene3D G3DSA:3.40.190.10 158 329 3.8E-116 T 14-10-2018 VAB027_1949 12ac57b526aa946d535bc8ba680ecb6c 364 PIRSF PIRSF039026 7 364 5.8E-144 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 Gene3D G3DSA:3.30.1440.10 1 179 2.8E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 PIRSF PIRSF002161 1 179 3.3E-66 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.152 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 SUPERFAMILY SSF55282 4 179 8.95E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.7E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1285 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-28 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_1149 05ebd4b0b51a516b5ec714aea5d61f00 242 Gene3D G3DSA:3.40.190.10 103 198 6.2E-42 T 14-10-2018 VAB027_1149 05ebd4b0b51a516b5ec714aea5d61f00 242 SUPERFAMILY SSF53850 18 239 3.26E-45 T 14-10-2018 VAB027_1149 05ebd4b0b51a516b5ec714aea5d61f00 242 SMART SM00062 21 242 2.5E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1149 05ebd4b0b51a516b5ec714aea5d61f00 242 Gene3D G3DSA:3.40.190.10 28 239 6.2E-42 T 14-10-2018 VAB027_1149 05ebd4b0b51a516b5ec714aea5d61f00 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 240 3.4E-35 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_3460 925c2901b8d0144fa4f1908124682f36 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 3.0E-39 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VAB027_3460 925c2901b8d0144fa4f1908124682f36 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VAB027_3460 925c2901b8d0144fa4f1908124682f36 139 SUPERFAMILY SSF111038 1 139 1.31E-50 T 14-10-2018 IPR035917 YjbQ-like superfamily VAB027_3460 925c2901b8d0144fa4f1908124682f36 139 Gene3D G3DSA:2.60.120.460 2 139 1.0E-42 T 14-10-2018 IPR035917 YjbQ-like superfamily VAB027_3460 925c2901b8d0144fa4f1908124682f36 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 139 2.6E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VAB027_3460 925c2901b8d0144fa4f1908124682f36 139 PIRSF PIRSF004681 1 139 1.7E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VAB027_3343 0a30b5f90a261a84f8f5e33b199b9e54 211 Pfam PF01810 LysE type translocator 15 200 3.2E-39 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_1476 6db3fcceca0cd7bdb44db6ed8bd3101d 142 Pfam PF10980 Protein of unknown function (DUF2787) 14 139 8.3E-42 T 14-10-2018 IPR021248 Protein of unknown function DUF2787 VAB027_1476 6db3fcceca0cd7bdb44db6ed8bd3101d 142 Gene3D G3DSA:3.10.450.430 2 141 1.4E-33 T 14-10-2018 VAB027_802 c87c181b7155697fc3b522f6b2bfc32c 168 SUPERFAMILY SSF55804 5 152 3.4E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_802 c87c181b7155697fc3b522f6b2bfc32c 168 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 5.4E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_802 c87c181b7155697fc3b522f6b2bfc32c 168 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VAB027_802 c87c181b7155697fc3b522f6b2bfc32c 168 Gene3D G3DSA:3.40.930.10 1 165 5.2E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAB027_751 c6470013085e628cd3e9b4408198dec1 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 57 2.5E-6 T 14-10-2018 VAB027_751 c6470013085e628cd3e9b4408198dec1 83 SUPERFAMILY SSF143120 11 68 8.76E-10 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_751 c6470013085e628cd3e9b4408198dec1 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 71 2.1E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_1806 1fa30f0bf94b3caad00e087bfe3b3d6c 175 Pfam PF12915 Protein of unknown function (DUF3833) 13 173 7.4E-65 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 SUPERFAMILY SSF53474 5 267 2.53E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 Pfam PF00561 alpha/beta hydrolase fold 24 253 4.0E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 Gene3D G3DSA:3.40.50.1820 1 269 3.0E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00412 Epoxide hydrolase signature 104 117 1.8E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00412 Epoxide hydrolase signature 243 265 1.8E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.8E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.6E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 4.6E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.6E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_3327 fc1ad93602842395cddf5e6d215e4405 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.6E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 SMART SM00448 600 714 1.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Pfam PF02743 Cache domain 42 237 1.8E-13 T 14-10-2018 IPR033479 Double Cache domain 1 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Gene3D G3DSA:3.30.565.10 418 584 2.5E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Gene3D G3DSA:3.40.50.2300 585 723 7.5E-33 T 14-10-2018 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 SMART SM00387 466 581 6.4E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Gene3D G3DSA:1.10.287.130 319 417 2.6E-25 T 14-10-2018 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 419 1.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 SUPERFAMILY SSF47384 342 420 1.12E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 SUPERFAMILY SSF55874 408 583 2.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Gene3D G3DSA:3.30.450.20 36 207 9.1E-20 T 14-10-2018 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 SUPERFAMILY SSF52172 598 723 4.41E-31 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 3.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 3.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 3.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 3.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Pfam PF00072 Response regulator receiver domain 602 714 2.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 SMART SM00388 354 419 1.8E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_2473 82d42485f13b3b103e8ea4a758fc6dfc 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 580 9.5E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 Gene3D G3DSA:2.40.50.100 56 188 3.6E-74 T 14-10-2018 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 352 9.6E-70 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 Gene3D G3DSA:2.40.30.170 46 268 3.6E-74 T 14-10-2018 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 Gene3D G3DSA:2.40.420.20 269 350 3.6E-74 T 14-10-2018 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 Gene3D G3DSA:1.10.287.470 90 149 3.6E-74 T 14-10-2018 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 Pfam PF13437 HlyD family secretion protein 154 252 8.1E-10 T 14-10-2018 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 SUPERFAMILY SSF111369 49 262 2.75E-30 T 14-10-2018 VAB027_2321 2b70db38868fed25ffae24bcd2c10f24 359 Pfam PF13533 Biotin-lipoyl like 60 103 3.1E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAB027_219 f56a3f463c41932f649d0851ba9c156e 183 SUPERFAMILY SSF110997 108 179 5.75E-17 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_219 f56a3f463c41932f649d0851ba9c156e 183 Pfam PF05036 Sporulation related domain 109 178 9.1E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAB027_219 f56a3f463c41932f649d0851ba9c156e 183 Gene3D G3DSA:3.30.70.1070 102 182 3.0E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 SUPERFAMILY SSF47384 280 351 6.28E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 Pfam PF11884 Domain of unknown function (DUF3404) 28 284 5.7E-109 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 SUPERFAMILY SSF55874 359 488 1.29E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 486 6.8E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 SMART SM00388 285 352 2.0E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 341 1.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 SMART SM00387 390 488 2.7E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 Gene3D G3DSA:1.10.287.130 292 349 2.6E-17 T 14-10-2018 VAB027_598 082b79b6a40820eb6fa5f551b9f02205 493 Gene3D G3DSA:3.30.565.10 350 485 2.6E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 SUPERFAMILY SSF51556 1 341 1.92E-147 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 PIRSF PIRSF001237 1 342 9.5E-144 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 Pfam PF01979 Amidohydrolase family 11 315 6.6E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.3E-140 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 47.267 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAB027_1194 aa880f255ec9b8b4aa82372ef52cc41b 342 Gene3D G3DSA:3.20.20.140 2 342 1.9E-113 T 14-10-2018 VAB027_3449 7817c72709b68254bb5e549e611fb462 253 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 51 222 1.5E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VAB027_3449 7817c72709b68254bb5e549e611fb462 253 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 12 246 40.147 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VAB027_3449 7817c72709b68254bb5e549e611fb462 253 SUPERFAMILY SSF52402 25 211 1.29E-55 T 14-10-2018 VAB027_3449 7817c72709b68254bb5e549e611fb462 253 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 245 3.3E-91 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VAB027_3449 7817c72709b68254bb5e549e611fb462 253 PIRSF PIRSF000857 5 251 1.1E-56 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VAB027_3449 7817c72709b68254bb5e549e611fb462 253 Gene3D G3DSA:3.40.50.620 7 219 1.3E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_3449 7817c72709b68254bb5e549e611fb462 253 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 36 246 1.7E-86 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VAB027_152 0049e848b0cf8e1105d32eff1d818b24 309 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 294 23.659 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VAB027_152 0049e848b0cf8e1105d32eff1d818b24 309 Pfam PF03631 Virulence factor BrkB 28 276 2.5E-60 T 14-10-2018 IPR017039 Virulence factor BrkB VAB027_152 0049e848b0cf8e1105d32eff1d818b24 309 PIRSF PIRSF035875 1 294 6.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB VAB027_152 0049e848b0cf8e1105d32eff1d818b24 309 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 17 275 1.3E-80 T 14-10-2018 IPR017039 Virulence factor BrkB VAB027_1953 393f525f7d576379b8d08bc770467872 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 SMART SM00421 148 205 5.0E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 Gene3D G3DSA:3.40.50.12740 5 211 2.0E-65 T 14-10-2018 VAB027_1953 393f525f7d576379b8d08bc770467872 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 Pfam PF00072 Response regulator receiver domain 9 119 7.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1953 393f525f7d576379b8d08bc770467872 212 SMART SM00448 5 118 3.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1953 393f525f7d576379b8d08bc770467872 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 SUPERFAMILY SSF46894 140 211 1.33E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_1953 393f525f7d576379b8d08bc770467872 212 SUPERFAMILY SSF52172 4 134 2.7E-35 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1801 44d7dca542b7e7f141b2a9782416159e 425 Gene3D G3DSA:3.50.50.60 1 311 5.3E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1801 44d7dca542b7e7f141b2a9782416159e 425 SUPERFAMILY SSF51905 1 412 1.94E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_1801 44d7dca542b7e7f141b2a9782416159e 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 8.7E-20 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 PRINTS PR00301 70kDa heat shock protein signature 412 432 7.7E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 PRINTS PR00301 70kDa heat shock protein signature 161 181 7.7E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 PRINTS PR00301 70kDa heat shock protein signature 10 23 7.7E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 PRINTS PR00301 70kDa heat shock protein signature 228 238 7.7E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 222 235 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 Pfam PF00012 Hsp70 protein 12 336 4.5E-17 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 Gene3D G3DSA:3.30.420.40 221 301 1.7E-5 T 14-10-2018 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 SUPERFAMILY SSF53067 217 471 1.3E-26 T 14-10-2018 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 14 21 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 SUPERFAMILY SSF53067 9 204 5.07E-27 T 14-10-2018 VAB027_2050 fae5a17d9814396212f6ccef04022aa8 631 Gene3D G3DSA:3.30.420.40 6 220 9.1E-27 T 14-10-2018 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 SUPERFAMILY SSF103473 13 462 3.4E-60 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 Gene3D G3DSA:1.20.1250.20 256 464 5.6E-20 T 14-10-2018 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 Pfam PF07690 Major Facilitator Superfamily 22 401 5.7E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 1.8E-7 T 14-10-2018 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 1.8E-7 T 14-10-2018 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 1.8E-7 T 14-10-2018 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 1.8E-7 T 14-10-2018 VAB027_2066 55923431ad6cc73b069a40c797f5e7d4 468 Gene3D G3DSA:1.20.1720.10 18 244 4.5E-47 T 14-10-2018 VAB027_2692 15d6facefd2c8a2d098911eae83d05a5 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 3.5E-16 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VAB027_2692 15d6facefd2c8a2d098911eae83d05a5 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 7.9E-16 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VAB027_3008 4be94dfe1042aa2e62c2d5996b8cfdfc 231 Gene3D G3DSA:3.40.50.1580 1 231 2.6E-73 T 14-10-2018 VAB027_3008 4be94dfe1042aa2e62c2d5996b8cfdfc 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.1E-99 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3008 4be94dfe1042aa2e62c2d5996b8cfdfc 231 Pfam PF01048 Phosphorylase superfamily 2 227 2.2E-50 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAB027_3008 4be94dfe1042aa2e62c2d5996b8cfdfc 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.794 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAB027_3008 4be94dfe1042aa2e62c2d5996b8cfdfc 231 SUPERFAMILY SSF53167 1 230 9.95E-75 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAB027_102 a9388ec859b081878c29b1b668650f49 399 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 59 388 8.4E-103 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VAB027_1668 54fb05cb1485608fa5f4115e93e3873a 182 SUPERFAMILY SSF56300 1 164 3.38E-37 T 14-10-2018 VAB027_1668 54fb05cb1485608fa5f4115e93e3873a 182 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 169 1.6E-33 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VAB027_1668 54fb05cb1485608fa5f4115e93e3873a 182 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 160 9.2E-25 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VAB027_1668 54fb05cb1485608fa5f4115e93e3873a 182 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 14-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site VAB027_1668 54fb05cb1485608fa5f4115e93e3873a 182 Gene3D G3DSA:3.60.21.10 1 180 8.2E-65 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_534 d3ddca1130f8f712f3beafe8ef1721d6 143 Gene3D G3DSA:3.90.79.10 9 137 4.7E-22 T 14-10-2018 VAB027_534 d3ddca1130f8f712f3beafe8ef1721d6 143 Pfam PF00293 NUDIX domain 19 116 1.2E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_534 d3ddca1130f8f712f3beafe8ef1721d6 143 SUPERFAMILY SSF55811 7 117 8.12E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_534 d3ddca1130f8f712f3beafe8ef1721d6 143 PRINTS PR00502 NUDIX hydrolase family signature 56 71 4.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_534 d3ddca1130f8f712f3beafe8ef1721d6 143 PRINTS PR00502 NUDIX hydrolase family signature 42 56 4.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_534 d3ddca1130f8f712f3beafe8ef1721d6 143 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_2719 4ae6e1b3f31fc74835d612dec2e9353a 260 Pfam PF00950 ABC 3 transport family 1 255 7.9E-73 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VAB027_2719 4ae6e1b3f31fc74835d612dec2e9353a 260 SUPERFAMILY SSF81345 2 257 1.44E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Gene3D G3DSA:3.90.640.10 238 310 1.0E-110 T 14-10-2018 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 SUPERFAMILY SSF100920 384 536 4.45E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.2E-265 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 SUPERFAMILY SSF100934 503 615 1.41E-35 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Gene3D G3DSA:1.20.1270.10 519 615 5.2E-28 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Gene3D G3DSA:2.60.34.10 378 518 6.2E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Gene3D G3DSA:3.30.420.40 23 373 1.0E-110 T 14-10-2018 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.568 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 SUPERFAMILY SSF53067 19 196 1.24E-49 T 14-10-2018 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Gene3D G3DSA:3.30.420.40 194 360 1.0E-110 T 14-10-2018 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 Pfam PF00012 Hsp70 protein 22 600 2.3E-192 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 SUPERFAMILY SSF53067 200 376 4.02E-50 T 14-10-2018 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 328 344 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 465 481 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 384 403 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_1408 9e3dc30d526220bf2f93958149dff731 616 PRINTS PR00301 70kDa heat shock protein signature 359 379 1.1E-56 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAB027_2314 698780fbba1ec28e35be87199722c3a9 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAB027_2314 698780fbba1ec28e35be87199722c3a9 206 Gene3D G3DSA:1.20.120.1760 2 201 6.4E-21 T 14-10-2018 VAB027_2314 698780fbba1ec28e35be87199722c3a9 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 2.6E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAB027_3305 e5ef93f0b7830a91dbe23486ad17fd2a 152 Gene3D G3DSA:1.10.10.10 6 52 6.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3305 e5ef93f0b7830a91dbe23486ad17fd2a 152 Pfam PF02631 RecX family 30 147 8.1E-33 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VAB027_3305 e5ef93f0b7830a91dbe23486ad17fd2a 152 Gene3D G3DSA:1.10.10.10 55 97 2.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3305 e5ef93f0b7830a91dbe23486ad17fd2a 152 Hamap MF_01114 Regulatory protein RecX [recX]. 2 152 14.56 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VAB027_3305 e5ef93f0b7830a91dbe23486ad17fd2a 152 Gene3D G3DSA:1.10.10.10 100 148 5.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_668 d87603d10881870256532625b72ccf77 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 2.5E-29 T 14-10-2018 IPR009956 Post-segregation antitoxin CcdA VAB027_3763 8b8e23b09d5b2dff1cac75a0a91991f5 245 Gene3D G3DSA:3.40.50.300 1 243 6.4E-76 T 14-10-2018 VAB027_3763 8b8e23b09d5b2dff1cac75a0a91991f5 245 Pfam PF00005 ABC transporter 17 168 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_3763 8b8e23b09d5b2dff1cac75a0a91991f5 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_3763 8b8e23b09d5b2dff1cac75a0a91991f5 245 PIRSF PIRSF039085 1 244 2.4E-104 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAB027_3763 8b8e23b09d5b2dff1cac75a0a91991f5 245 SMART SM00382 26 216 4.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3763 8b8e23b09d5b2dff1cac75a0a91991f5 245 SUPERFAMILY SSF52540 1 238 1.04E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_523 405d839f7ec228526afee07ed40d6c24 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.2E-14 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 VAB027_308 9ab8bff4e5b05d067c0dd2401d17b210 369 SUPERFAMILY SSF58100 43 350 2.48E-29 T 14-10-2018 VAB027_308 9ab8bff4e5b05d067c0dd2401d17b210 369 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 47 187 1.0E-9 T 14-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 VAB027_308 9ab8bff4e5b05d067c0dd2401d17b210 369 Gene3D G3DSA:1.20.1170.10 13 358 6.3E-18 T 14-10-2018 VAB027_3642 bcc0f1b76cdce892a54fb6f3f69426ef 427 Gene3D G3DSA:1.10.443.10 211 396 4.2E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_3642 bcc0f1b76cdce892a54fb6f3f69426ef 427 SUPERFAMILY SSF56349 97 393 1.15E-41 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_3642 bcc0f1b76cdce892a54fb6f3f69426ef 427 Pfam PF00589 Phage integrase family 211 383 8.6E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_3642 bcc0f1b76cdce892a54fb6f3f69426ef 427 Gene3D G3DSA:3.30.160.390 3 92 1.5E-13 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAB027_3642 bcc0f1b76cdce892a54fb6f3f69426ef 427 Pfam PF13356 Arm DNA-binding domain 4 91 4.7E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VAB027_3642 bcc0f1b76cdce892a54fb6f3f69426ef 427 Gene3D G3DSA:1.10.150.130 93 209 1.2E-24 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_2179 94dfb94425afc7e25c568b25884db059 166 Gene3D G3DSA:3.90.1720.10 42 161 1.6E-39 T 14-10-2018 VAB027_2179 94dfb94425afc7e25c568b25884db059 166 Pfam PF00877 NlpC/P60 family 53 157 2.2E-30 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VAB027_2179 94dfb94425afc7e25c568b25884db059 166 SUPERFAMILY SSF54001 37 159 7.85E-41 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VAB027_1302 72e85f1059a190b4b48e3ffbe4656e4e 297 SUPERFAMILY SSF103481 41 141 1.7E-14 T 14-10-2018 VAB027_1302 72e85f1059a190b4b48e3ffbe4656e4e 297 Pfam PF00892 EamA-like transporter family 143 268 4.3E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1302 72e85f1059a190b4b48e3ffbe4656e4e 297 Pfam PF00892 EamA-like transporter family 7 137 5.3E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1302 72e85f1059a190b4b48e3ffbe4656e4e 297 SUPERFAMILY SSF103481 178 270 1.12E-10 T 14-10-2018 VAB027_1581 a833dc455a3339c7994378f2a71a3b6c 188 Pfam PF11985 Protein of unknown function (DUF3486) 7 186 9.9E-50 T 14-10-2018 IPR021874 Bacteriophage Mu, Gp27 VAB027_2907 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.1 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VAB027_2907 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Gene3D G3DSA:1.10.940.10 3 156 1.6E-47 T 14-10-2018 IPR035926 NusB-like superfamily VAB027_2907 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 SUPERFAMILY SSF48013 7 153 8.37E-39 T 14-10-2018 IPR035926 NusB-like superfamily VAB027_2907 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 3.6E-42 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VAB027_2907 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Pfam PF01029 NusB family 11 149 1.1E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VAB027_1501 0157c443e5db9bc035e7393467801350 195 PIRSF PIRSF004525 1 195 4.2E-12 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VAB027_1501 0157c443e5db9bc035e7393467801350 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 3.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_2591 247236232554739a13bf084d2c4a29ed 335 SUPERFAMILY SSF48695 1 147 5.16E-42 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VAB027_2591 247236232554739a13bf084d2c4a29ed 335 Gene3D G3DSA:1.10.3820.10 1 151 4.4E-29 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VAB027_2591 247236232554739a13bf084d2c4a29ed 335 PIRSF PIRSF000014 1 335 5.5E-149 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VAB027_2591 247236232554739a13bf084d2c4a29ed 335 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 1 145 3.8E-58 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VAB027_2257 1ea01c4bb64502e47cb45aeb4b323032 382 Gene3D G3DSA:3.40.1710.10 40 120 2.0E-5 T 14-10-2018 VAB027_2257 1ea01c4bb64502e47cb45aeb4b323032 382 Pfam PF12698 ABC-2 family transporter protein 20 368 1.7E-41 T 14-10-2018 VAB027_3685 0a1d351308d19ab3706395e3438b29b6 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 6.7E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3685 0a1d351308d19ab3706395e3438b29b6 325 Gene3D G3DSA:1.10.3720.10 84 314 1.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3685 0a1d351308d19ab3706395e3438b29b6 325 SUPERFAMILY SSF161098 90 302 1.05E-16 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1983 4c13f603283343dcfffb4fe9b61467f4 339 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 64 333 1.6E-70 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 VAB027_1983 4c13f603283343dcfffb4fe9b61467f4 339 Pfam PF05128 Domain of unknown function (DUF697) 175 333 2.7E-49 T 14-10-2018 IPR021147 Protein of unknown function DUF697 VAB027_45 ee65d9d0ca89833882470288fae71cff 91 Gene3D G3DSA:3.30.160.140 1 90 1.1E-32 T 14-10-2018 IPR036692 Shew3726-like superfamily VAB027_45 ee65d9d0ca89833882470288fae71cff 91 SUPERFAMILY SSF160272 1 86 3.66E-30 T 14-10-2018 IPR036692 Shew3726-like superfamily VAB027_45 ee65d9d0ca89833882470288fae71cff 91 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 2.6E-25 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 VAB027_1838 a2e44bd780a185d109a4ff686617536f 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 409 6.9E-46 T 14-10-2018 IPR010352 Protein of unknown function DUF945 VAB027_3646 b47f475460b48ff20e89a3c5ffdacc95 553 Pfam PF06048 Domain of unknown function (DUF927) 15 276 2.5E-65 T 14-10-2018 IPR009270 Domain of unknown function DUF927 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 SMART SM00448 2 115 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 Gene3D G3DSA:3.40.50.12740 2 209 1.2E-58 T 14-10-2018 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 SMART SM00421 146 203 1.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 SUPERFAMILY SSF46894 135 210 1.26E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 Pfam PF00072 Response regulator receiver domain 4 116 1.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1892 34b1252c802d2ea2fae0cd34bbb26f8f 214 SUPERFAMILY SSF52172 3 132 3.42E-33 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.4E-52 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.4E-52 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.4E-52 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.4E-52 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.4E-52 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.4E-52 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 SUPERFAMILY SSF53067 101 309 3.52E-44 T 14-10-2018 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.953 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 SUPERFAMILY SSF53067 3 123 9.93E-31 T 14-10-2018 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 Gene3D G3DSA:3.30.420.40 129 293 3.5E-133 T 14-10-2018 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 Gene3D G3DSA:3.30.420.40 3 315 3.5E-133 T 14-10-2018 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 Pfam PF00814 Glycoprotease family 24 307 7.3E-105 T 14-10-2018 IPR000905 Gcp-like domain VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.5E-136 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VAB027_3328 370de0fef08bc6c2f05c67d359942dbc 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 6.6E-126 T 14-10-2018 IPR017861 Kae1/TsaD family VAB027_1030 b1b2f76fd9f601500034a090c66afa3f 547 SUPERFAMILY SSF53649 303 528 1.61E-19 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAB027_1030 b1b2f76fd9f601500034a090c66afa3f 547 Gene3D G3DSA:3.40.720.10 214 546 3.1E-81 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAB027_1030 b1b2f76fd9f601500034a090c66afa3f 547 Pfam PF08019 Domain of unknown function (DUF1705) 57 208 2.2E-47 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VAB027_1030 b1b2f76fd9f601500034a090c66afa3f 547 Pfam PF00884 Sulfatase 239 527 2.8E-48 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 Pfam PF13377 Periplasmic binding protein-like domain 171 334 1.4E-37 T 14-10-2018 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 Gene3D G3DSA:1.10.260.40 1 54 5.2E-24 T 14-10-2018 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 Gene3D G3DSA:3.40.50.2300 55 309 2.7E-69 T 14-10-2018 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 Gene3D G3DSA:3.40.50.2300 161 294 2.7E-69 T 14-10-2018 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 SUPERFAMILY SSF47413 1 60 5.44E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 SMART SM00354 1 71 2.5E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 SUPERFAMILY SSF53822 61 335 1.21E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_2200 f2401bf7d54a21d9c32cb21cab712aa8 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2070 ecabdd5956120912ad23b113ca89d6f7 126 Gene3D G3DSA:3.40.50.2300 1 124 4.1E-35 T 14-10-2018 VAB027_2070 ecabdd5956120912ad23b113ca89d6f7 126 Pfam PF00072 Response regulator receiver domain 5 117 3.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2070 ecabdd5956120912ad23b113ca89d6f7 126 SUPERFAMILY SSF52172 3 122 3.98E-34 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2070 ecabdd5956120912ad23b113ca89d6f7 126 SMART SM00448 3 117 2.9E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 7.7E-58 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.367 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 SMART SM00934 5 226 3.6E-103 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 Gene3D G3DSA:3.20.20.70 1 231 5.8E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 SUPERFAMILY SSF51366 2 228 3.11E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAB027_2555 fb98bf528057558a8c1d6da078a82ded 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 226 4.8E-54 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1111 4399c318ce10578b70262522f612a5fd 147 Pfam PF07681 DoxX 17 103 2.6E-24 T 14-10-2018 IPR032808 DoxX family VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 SUPERFAMILY SSF52374 1 313 1.98E-103 T 14-10-2018 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 Pfam PF09190 DALR domain 341 402 9.4E-25 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 Gene3D G3DSA:1.20.120.640 306 459 2.3E-51 T 14-10-2018 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 SUPERFAMILY SSF47323 316 458 5.1E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 5.3E-193 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 Gene3D G3DSA:3.40.50.620 1 305 7.9E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.6E-142 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.208 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VAB027_2491 757ef38e42b9b21bc5c103f6e404b560 459 SMART SM00840 341 402 1.8E-27 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VAB027_3641 dd4d1b28a31f4550b40a9317c2007208 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.2E-42 T 14-10-2018 IPR013527 YicC-like, N-terminal VAB027_3641 dd4d1b28a31f4550b40a9317c2007208 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 5.7E-35 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 VAB027_3641 dd4d1b28a31f4550b40a9317c2007208 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 6.0E-118 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VAB027_3764 8cbbbbf4a9db6a310f044040c7a3a96e 223 Gene3D G3DSA:1.10.3720.10 1 222 6.8E-55 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3764 8cbbbbf4a9db6a310f044040c7a3a96e 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 2.5E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_3764 8cbbbbf4a9db6a310f044040c7a3a96e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 2.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3764 8cbbbbf4a9db6a310f044040c7a3a96e 223 SUPERFAMILY SSF161098 13 206 2.75E-44 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 Gene3D G3DSA:3.40.1550.10 43 230 1.7E-55 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 Pfam PF02154 Flagellar motor switch protein FliM 37 229 9.4E-82 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 SUPERFAMILY SSF101801 248 323 1.96E-13 T 14-10-2018 IPR036429 SpoA-like superfamily VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 PIRSF PIRSF002888 1 328 7.1E-92 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.2E-16 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.3E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.3E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.3E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.3E-18 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 SUPERFAMILY SSF103039 4 230 5.06E-22 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_2758 942293afdb6c941507d2967aaf04d58b 349 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 1.3E-120 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 457 4.0E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 454 2.2E-33 T 14-10-2018 IPR000160 GGDEF domain VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 Gene3D G3DSA:3.40.190.10 117 213 4.0E-38 T 14-10-2018 VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 SUPERFAMILY SSF55073 307 457 3.06E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 SMART SM00267 291 458 8.8E-46 T 14-10-2018 IPR000160 GGDEF domain VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 Gene3D G3DSA:3.40.190.10 30 250 4.0E-38 T 14-10-2018 VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 SUPERFAMILY SSF53850 33 252 2.17E-39 T 14-10-2018 VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 3.6E-31 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 SMART SM00062 32 254 2.2E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_607 044e847c5734ac3ab560d0de2dd3934c 461 Gene3D G3DSA:3.30.70.270 287 459 2.0E-44 T 14-10-2018 VAB027_3291 ccff4d35f9efefa14d5f911e6b7c7d88 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 6.1E-159 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAB027_3291 ccff4d35f9efefa14d5f911e6b7c7d88 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 7.5E-171 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAB027_3291 ccff4d35f9efefa14d5f911e6b7c7d88 376 PIRSF PIRSF015658 1 376 5.6E-179 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAB027_3234 738ad6900fa0817b9b48f467694e48a1 294 SUPERFAMILY SSF53067 113 282 5.0E-45 T 14-10-2018 VAB027_3234 738ad6900fa0817b9b48f467694e48a1 294 Gene3D G3DSA:3.30.420.40 114 260 1.2E-70 T 14-10-2018 VAB027_3234 738ad6900fa0817b9b48f467694e48a1 294 SUPERFAMILY SSF53067 1 111 2.79E-26 T 14-10-2018 VAB027_3234 738ad6900fa0817b9b48f467694e48a1 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 282 1.3E-52 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VAB027_3234 738ad6900fa0817b9b48f467694e48a1 294 Gene3D G3DSA:3.30.420.40 3 113 1.2E-70 T 14-10-2018 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 SUPERFAMILY SSF46626 55 240 7.86E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 PIRSF PIRSF000006 1 324 1.5E-107 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 Gene3D G3DSA:1.20.58.1490 1 94 5.5E-34 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 5.5E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 1.6E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.3E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 SUPERFAMILY SSF46626 240 322 5.47E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 323 1.2E-57 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 Gene3D G3DSA:1.10.760.10 211 297 5.7E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 Gene3D G3DSA:1.10.760.10 145 320 5.7E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 PRINTS PR00605 Class IC cytochrome C signature 295 317 5.8E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAB027_2112 e9778248f1919052fdabbc46a342c12a 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 5.8E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 SUPERFAMILY SSF46894 119 217 5.67E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 SMART SM00862 145 216 3.0E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 SUPERFAMILY SSF52172 1 133 3.98E-37 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 Pfam PF00072 Response regulator receiver domain 3 113 5.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 Gene3D G3DSA:3.40.50.2300 1 122 3.3E-37 T 14-10-2018 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 SMART SM00448 1 112 2.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2285 fa8e1332651baa3094e4036dbc1a5ee5 219 Gene3D G3DSA:1.10.10.10 123 219 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 158 5.7E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 Pfam PF00589 Phage integrase family 214 376 2.1E-27 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 Pfam PF13356 Arm DNA-binding domain 8 95 6.3E-18 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 Gene3D G3DSA:3.30.160.390 6 95 3.0E-28 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 SUPERFAMILY SSF56349 106 386 5.0E-62 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 Gene3D G3DSA:1.10.443.10 214 387 2.2E-18 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAB027_1489 4d472357e6e6135d2dd81dd1dc153794 415 Gene3D G3DSA:1.10.150.130 97 212 7.2E-31 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.4E-164 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 SUPERFAMILY SSF53067 154 340 9.52E-51 T 14-10-2018 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 SUPERFAMILY SSF53067 9 152 1.11E-37 T 14-10-2018 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 14 331 1.6E-131 T 14-10-2018 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.90.640.10 190 263 1.6E-131 T 14-10-2018 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 158 321 1.6E-131 T 14-10-2018 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_3415 f06864a691a763c6d420bc53bb6f11bb 347 Pfam PF06723 MreB/Mbl protein 11 338 1.3E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAB027_1214 b8e12130bd66257e76d6573ad8ccaae8 188 Gene3D G3DSA:3.40.30.10 1 186 3.7E-34 T 14-10-2018 VAB027_1214 b8e12130bd66257e76d6573ad8ccaae8 188 SUPERFAMILY SSF52833 2 184 5.87E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_1214 b8e12130bd66257e76d6573ad8ccaae8 188 Pfam PF01323 DSBA-like thioredoxin domain 69 159 8.8E-7 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 Gene3D G3DSA:2.40.420.20 48 354 2.3E-78 T 14-10-2018 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 356 1.1E-68 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 SUPERFAMILY SSF111369 58 215 3.53E-25 T 14-10-2018 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 Gene3D G3DSA:2.40.50.100 68 201 2.3E-78 T 14-10-2018 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 Gene3D G3DSA:1.10.287.470 102 162 2.3E-78 T 14-10-2018 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 Gene3D G3DSA:2.40.30.170 54 278 2.3E-78 T 14-10-2018 VAB027_2389 b6fec516c98e885a9c8814c31a31cf9a 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 270 6.7E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_2848 e15f36ee18d7103fba08614f608c9400 144 Pfam PF02169 LPP20 lipoprotein 29 119 6.0E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like VAB027_2848 e15f36ee18d7103fba08614f608c9400 144 PIRSF PIRSF028687 1 144 6.9E-62 T 14-10-2018 IPR007293 Flagellar protein FlgP VAB027_3364 cc0af7d0f303521d44504b0255ff3dbe 185 Pfam PF02325 YGGT family 9 77 1.3E-20 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VAB027_3364 cc0af7d0f303521d44504b0255ff3dbe 185 Pfam PF02325 YGGT family 109 173 7.8E-20 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VAB027_1449 bd5576487b8cf223abfd616134b5e168 98 PIRSF PIRSF002736 1 97 8.7E-42 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAB027_1449 bd5576487b8cf223abfd616134b5e168 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 5.0E-34 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAB027_1449 bd5576487b8cf223abfd616134b5e168 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.943 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAB027_1449 bd5576487b8cf223abfd616134b5e168 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.9E-35 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAB027_1449 bd5576487b8cf223abfd616134b5e168 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 86 8.9E-32 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VAB027_926 a289a42898e111dbed698e433e500d64 586 Pfam PF01740 STAS domain 441 534 1.9E-14 T 14-10-2018 IPR002645 STAS domain VAB027_926 a289a42898e111dbed698e433e500d64 586 Gene3D G3DSA:3.30.750.24 433 552 1.2E-19 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_926 a289a42898e111dbed698e433e500d64 586 SUPERFAMILY SSF52091 443 534 8.24E-11 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_926 a289a42898e111dbed698e433e500d64 586 Pfam PF00916 Sulfate permease family 21 386 1.3E-80 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAB027_3734 0d91d91e7a527ee56cad8ea88ed4435e 847 SUPERFAMILY SSF52743 262 639 3.4E-34 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VAB027_3734 0d91d91e7a527ee56cad8ea88ed4435e 847 Gene3D G3DSA:3.40.50.200 275 632 5.7E-28 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VAB027_3734 0d91d91e7a527ee56cad8ea88ed4435e 847 Pfam PF00082 Subtilase family 279 625 2.8E-42 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 Gene3D G3DSA:2.40.50.230 362 461 8.3E-42 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 Pfam PF05954 Phage late control gene D protein (GPD) 41 334 7.3E-77 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 Gene3D G3DSA:2.30.110.50 13 336 1.9E-84 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 526 7.4E-189 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 SUPERFAMILY SSF69279 196 370 4.25E-46 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 SUPERFAMILY SSF69279 7 190 4.19E-51 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 Gene3D G3DSA:3.30.1920.30 228 291 1.9E-84 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 SUPERFAMILY SSF69349 447 628 7.06E-49 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 SUPERFAMILY SSF69255 369 456 4.97E-33 T 14-10-2018 VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 508 4.6E-132 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAB027_2089 50bf06ec3e2d3c35f94660f4caa38b93 683 Gene3D G3DSA:3.55.50.10 104 195 1.9E-84 T 14-10-2018 VAB027_1176 82caeed7d0c59def46350b16b4a882a8 173 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 3.2E-19 T 14-10-2018 IPR000182 GNAT domain VAB027_1176 82caeed7d0c59def46350b16b4a882a8 173 Gene3D G3DSA:3.40.630.30 4 173 1.1E-51 T 14-10-2018 VAB027_1176 82caeed7d0c59def46350b16b4a882a8 173 SUPERFAMILY SSF55729 3 164 6.28E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 Pfam PF00117 Glutamine amidotransferase class-I 6 186 7.5E-44 T 14-10-2018 IPR017926 Glutamine amidotransferase VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 5.0E-54 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.9E-5 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.9E-5 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 Gene3D G3DSA:3.40.50.880 1 193 4.1E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 SUPERFAMILY SSF52317 3 191 6.88E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.9E-35 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.9E-35 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.9E-35 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.9E-35 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.9E-35 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.9E-35 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 9.5E-14 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 9.5E-14 T 14-10-2018 VAB027_1854 26a49959338abc928a3d5164ea0d0380 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 9.5E-14 T 14-10-2018 VAB027_755 43f40cf90e539b924461de73f7badf2c 178 SUPERFAMILY SSF55729 2 171 6.57E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_755 43f40cf90e539b924461de73f7badf2c 178 Gene3D G3DSA:3.40.630.30 1 178 1.4E-43 T 14-10-2018 VAB027_755 43f40cf90e539b924461de73f7badf2c 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 1.2E-22 T 14-10-2018 IPR000182 GNAT domain VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 Gene3D G3DSA:3.30.230.20 1 128 9.0E-52 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.404 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.1E-107 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.2E-141 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 SUPERFAMILY SSF54211 3 126 2.28E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 SUPERFAMILY SSF54211 134 278 3.53E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_3023 08c1a36bce787b0d2bd4054abcc661c8 305 Gene3D G3DSA:3.30.1700.10 129 305 1.0E-69 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 Gene3D G3DSA:3.90.1150.10 10 394 1.0E-188 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 3.9E-184 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 Gene3D G3DSA:3.40.640.10 37 288 1.0E-188 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 PIRSF PIRSF000412 1 415 4.9E-170 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.642 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAB027_1632 40f4e2fafc4f3e212ac4da56c47dd166 416 SUPERFAMILY SSF53383 6 415 3.67E-185 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1274 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Gene3D G3DSA:3.40.1370.10 5 200 4.2E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1274 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 SUPERFAMILY SSF52166 8 199 7.46E-74 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VAB027_1274 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.953 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1274 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 5.0E-76 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1274 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VAB027_1653 9c00c6128be476ea23f89672bbe94646 169 Gene3D G3DSA:2.70.70.10 9 169 3.9E-61 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_1653 9c00c6128be476ea23f89672bbe94646 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 7.7E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VAB027_1653 9c00c6128be476ea23f89672bbe94646 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.2E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VAB027_1653 9c00c6128be476ea23f89672bbe94646 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VAB027_1653 9c00c6128be476ea23f89672bbe94646 169 SUPERFAMILY SSF51261 17 166 5.41E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_42 1753034f25186c35b9288973501327f7 305 Gene3D G3DSA:3.40.1500.10 1 305 3.7E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 171 195 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PIRSF PIRSF000166 2 305 4.7E-127 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 Pfam PF01218 Coproporphyrinogen III oxidase 10 305 3.8E-131 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 SUPERFAMILY SSF102886 7 305 3.53E-136 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PRINTS PR00073 Coprogen oxidase signature 32 48 1.9E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PRINTS PR00073 Coprogen oxidase signature 239 266 1.9E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PRINTS PR00073 Coprogen oxidase signature 130 152 1.9E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PRINTS PR00073 Coprogen oxidase signature 167 196 1.9E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PRINTS PR00073 Coprogen oxidase signature 95 119 1.9E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 PRINTS PR00073 Coprogen oxidase signature 267 293 1.9E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_42 1753034f25186c35b9288973501327f7 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 282 56.625 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAB027_331 847750421cecd710e2649d630b950d7e 307 Pfam PF00248 Aldo/keto reductase family 21 296 2.9E-57 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VAB027_331 847750421cecd710e2649d630b950d7e 307 Gene3D G3DSA:3.20.20.100 3 307 9.4E-98 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAB027_331 847750421cecd710e2649d630b950d7e 307 SUPERFAMILY SSF51430 9 298 1.31E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAB027_331 847750421cecd710e2649d630b950d7e 307 PRINTS PR00069 Aldo-keto reductase signature 119 137 2.3E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAB027_331 847750421cecd710e2649d630b950d7e 307 PRINTS PR00069 Aldo-keto reductase signature 150 167 2.3E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAB027_2219 905e6beb2ee7ea118bc7398479f0f19b 556 Pfam PF00501 AMP-binding enzyme 41 453 8.0E-64 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_2219 905e6beb2ee7ea118bc7398479f0f19b 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_2219 905e6beb2ee7ea118bc7398479f0f19b 556 SUPERFAMILY SSF56801 16 553 8.24E-101 T 14-10-2018 VAB027_2219 905e6beb2ee7ea118bc7398479f0f19b 556 Gene3D G3DSA:3.30.300.30 449 556 1.8E-26 T 14-10-2018 VAB027_2219 905e6beb2ee7ea118bc7398479f0f19b 556 Gene3D G3DSA:3.40.50.12780 30 448 6.3E-149 T 14-10-2018 VAB027_750 a4268a35e691f583959b3c83df7df4b9 95 SUPERFAMILY SSF143011 1 83 9.29E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_750 a4268a35e691f583959b3c83df7df4b9 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 2.5E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_750 a4268a35e691f583959b3c83df7df4b9 95 Gene3D G3DSA:3.30.2310.20 1 94 8.2E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_756 a4268a35e691f583959b3c83df7df4b9 95 SUPERFAMILY SSF143011 1 83 9.29E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_756 a4268a35e691f583959b3c83df7df4b9 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 2.5E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_756 a4268a35e691f583959b3c83df7df4b9 95 Gene3D G3DSA:3.30.2310.20 1 94 8.2E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_1525 e6fdfef15252f6791eb711c0c82d27b6 244 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.4E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1525 e6fdfef15252f6791eb711c0c82d27b6 244 SUPERFAMILY SSF55120 2 238 1.33E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1525 e6fdfef15252f6791eb711c0c82d27b6 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1525 e6fdfef15252f6791eb711c0c82d27b6 244 Gene3D G3DSA:3.30.2350.10 3 235 5.2E-60 T 14-10-2018 VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Gene3D G3DSA:2.70.240.20 329 606 9.7E-117 T 14-10-2018 VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Gene3D G3DSA:2.70.240.20 131 326 2.7E-89 T 14-10-2018 VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 SUPERFAMILY SSF50370 486 590 6.54E-14 T 14-10-2018 IPR035992 Ricin B-like lectins VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 SMART SM00458 484 599 2.3E-17 T 14-10-2018 IPR000772 Ricin B, lectin domain VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Pfam PF07968 Leukocidin/Hemolysin toxin family 215 477 5.7E-75 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Gene3D G3DSA:3.30.110.130 46 130 1.6E-38 T 14-10-2018 VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Pfam PF12563 Hemolytic toxin N terminal 5 187 8.3E-92 T 14-10-2018 IPR022220 Hemolytic toxin, N-terminal VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Pfam PF16458 Beta-prism lectin 612 739 5.6E-55 T 14-10-2018 IPR032496 Hemolysin, beta-prism lectin VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 Gene3D G3DSA:2.100.10.30 607 741 1.5E-42 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAB027_826 c3e0cde8e58d8c56c3890ef558084687 741 SUPERFAMILY SSF56959 278 477 1.23E-5 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily VAB027_3350 a30743329944721b477e181cfec6d7f9 665 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 4.1E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_3350 a30743329944721b477e181cfec6d7f9 665 SMART SM00861 355 526 9.2E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAB027_3350 a30743329944721b477e181cfec6d7f9 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 664 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 SUPERFAMILY SSF52922 534 665 1.06E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 SUPERFAMILY SSF52518 347 528 7.0E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_3350 a30743329944721b477e181cfec6d7f9 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.5E-168 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 Gene3D G3DSA:3.40.50.970 1 326 8.4E-133 T 14-10-2018 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 Pfam PF02780 Transketolase, C-terminal domain 542 656 1.1E-18 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VAB027_3350 a30743329944721b477e181cfec6d7f9 665 Gene3D G3DSA:3.40.50.920 539 665 6.1E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAB027_3350 a30743329944721b477e181cfec6d7f9 665 SUPERFAMILY SSF52518 5 331 1.13E-120 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VAB027_3350 a30743329944721b477e181cfec6d7f9 665 Gene3D G3DSA:3.40.50.970 327 538 9.4E-83 T 14-10-2018 VAB027_3631 b48a836b153c9fa459139f17c082f638 55 Pfam PF00471 Ribosomal protein L33 7 53 5.7E-17 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3631 b48a836b153c9fa459139f17c082f638 55 SUPERFAMILY SSF57829 1 53 2.69E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VAB027_3631 b48a836b153c9fa459139f17c082f638 55 Gene3D G3DSA:2.20.28.120 1 55 2.8E-30 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3631 b48a836b153c9fa459139f17c082f638 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.747 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3631 b48a836b153c9fa459139f17c082f638 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3631 b48a836b153c9fa459139f17c082f638 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.5E-25 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3320 a0591cb84ce2ef36e675d140de10a4a7 158 Gene3D G3DSA:3.30.1330.50 1 158 1.1E-70 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAB027_3320 a0591cb84ce2ef36e675d140de10a4a7 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAB027_3320 a0591cb84ce2ef36e675d140de10a4a7 158 Pfam PF02542 YgbB family 2 155 1.9E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAB027_3320 a0591cb84ce2ef36e675d140de10a4a7 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.938 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAB027_3320 a0591cb84ce2ef36e675d140de10a4a7 158 SUPERFAMILY SSF69765 1 157 3.27E-66 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAB027_3320 a0591cb84ce2ef36e675d140de10a4a7 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.6E-69 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAB027_182 24b3a757240ab34697fd0525b2897180 466 Pfam PF00860 Permease family 23 415 9.5E-98 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VAB027_182 24b3a757240ab34697fd0525b2897180 466 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 3.9E-131 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 VAB027_182 24b3a757240ab34697fd0525b2897180 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 2.7E-127 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAB027_182 24b3a757240ab34697fd0525b2897180 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAB027_2315 aa203192847603c23a9d44b62ec23314 235 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.8E-120 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like VAB027_2315 aa203192847603c23a9d44b62ec23314 235 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2315 aa203192847603c23a9d44b62ec23314 235 SUPERFAMILY SSF55120 2 197 1.1E-46 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2315 aa203192847603c23a9d44b62ec23314 235 Pfam PF00849 RNA pseudouridylate synthase 10 153 9.6E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_2315 aa203192847603c23a9d44b62ec23314 235 Gene3D G3DSA:3.30.2350.10 1 195 2.8E-48 T 14-10-2018 VAB027_158 ec8fac55f4a20843971bf4df456f147e 125 Pfam PF01479 S4 domain 8 54 8.1E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_158 ec8fac55f4a20843971bf4df456f147e 125 Gene3D G3DSA:3.10.290.10 2 106 1.6E-38 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_158 ec8fac55f4a20843971bf4df456f147e 125 PIRSF PIRSF016821 5 125 2.6E-42 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VAB027_158 ec8fac55f4a20843971bf4df456f147e 125 SMART SM00363 8 71 2.2E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_158 ec8fac55f4a20843971bf4df456f147e 125 SUPERFAMILY SSF55174 6 104 1.22E-32 T 14-10-2018 VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 Pfam PF01497 Periplasmic binding protein 56 286 6.2E-21 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 SUPERFAMILY SSF53807 53 312 3.65E-51 T 14-10-2018 VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 Gene3D G3DSA:3.40.50.1980 142 314 1.6E-46 T 14-10-2018 VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 104 119 6.8E-6 T 14-10-2018 VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 293 306 6.8E-6 T 14-10-2018 VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 73 91 6.8E-6 T 14-10-2018 VAB027_3668 46d89ccb32772fe67e93819e880c1b23 319 Gene3D G3DSA:3.40.50.1980 41 140 1.7E-30 T 14-10-2018 VAB027_2589 fda6ae91622968f5324a8faa54d9bdfd 608 SUPERFAMILY SSF51197 352 567 9.62E-11 T 14-10-2018 VAB027_2589 fda6ae91622968f5324a8faa54d9bdfd 608 Gene3D G3DSA:3.60.130.10 313 591 1.6E-25 T 14-10-2018 VAB027_2589 fda6ae91622968f5324a8faa54d9bdfd 608 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 39 291 3.4E-62 T 14-10-2018 IPR007817 Pyoverdine biosynthesis VAB027_2589 fda6ae91622968f5324a8faa54d9bdfd 608 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 354 567 5.7E-8 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 Gene3D G3DSA:3.90.780.10 366 552 3.0E-59 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 511 4.0E-34 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 Gene3D G3DSA:3.60.21.10 30 365 1.5E-130 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 420 443 2.2E-54 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 211 228 2.2E-54 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 287 307 2.2E-54 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 487 506 2.2E-54 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 242 265 2.2E-54 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 36 54 2.2E-54 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 SUPERFAMILY SSF56300 31 363 5.58E-101 T 14-10-2018 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.5E-21 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_2800 b6fd63c827979ddb9695df8932d33c37 553 SUPERFAMILY SSF55816 366 542 3.4E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_712 b35b760ea3302855b4cd00c78a521423 149 SMART SM00871 1 149 1.0E-17 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VAB027_712 b35b760ea3302855b4cd00c78a521423 149 Gene3D G3DSA:3.20.80.10 1 149 3.2E-45 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VAB027_712 b35b760ea3302855b4cd00c78a521423 149 SUPERFAMILY SSF55136 3 138 3.4E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VAB027_712 b35b760ea3302855b4cd00c78a521423 149 Pfam PF14526 Integron-associated effector binding protein 3 147 1.8E-22 T 14-10-2018 IPR029441 Integron-associated effector binding protein VAB027_2586 3766d14cc4aa1f13d30ade859beb9dc0 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 261 3.1E-44 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VAB027_2586 3766d14cc4aa1f13d30ade859beb9dc0 282 SUPERFAMILY SSF51197 9 263 1.92E-62 T 14-10-2018 VAB027_2586 3766d14cc4aa1f13d30ade859beb9dc0 282 Gene3D G3DSA:3.60.130.10 1 277 4.6E-94 T 14-10-2018 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Gene3D G3DSA:3.40.50.10930 4 322 1.1E-126 T 14-10-2018 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Gene3D G3DSA:1.10.486.10 458 670 7.7E-191 T 14-10-2018 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 SUPERFAMILY SSF52980 826 1135 2.95E-73 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 809 2.1E-296 T 14-10-2018 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Gene3D G3DSA:3.40.50.300 340 811 7.7E-191 T 14-10-2018 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Gene3D G3DSA:1.10.10.990 872 948 2.3E-17 T 14-10-2018 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1109 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 PIRSF PIRSF000980 1 1148 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1146 20.658 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 SUPERFAMILY SSF52540 367 810 5.31E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 Gene3D G3DSA:1.10.10.160 79 187 1.1E-126 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAB027_2956 a68118393ae72e1d67fc5b2c72620e22 1148 SUPERFAMILY SSF52540 2 352 2.92E-123 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2664 eb52a9184f43eb90ac06422618eedced 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 2.2E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_2664 eb52a9184f43eb90ac06422618eedced 193 Gene3D G3DSA:3.90.950.10 5 193 9.3E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_2664 eb52a9184f43eb90ac06422618eedced 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 30.073 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_2664 eb52a9184f43eb90ac06422618eedced 193 PIRSF PIRSF006305 1 193 2.2E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_2664 eb52a9184f43eb90ac06422618eedced 193 SUPERFAMILY SSF52972 1 186 4.05E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAB027_2664 eb52a9184f43eb90ac06422618eedced 193 Pfam PF02545 Maf-like protein 5 187 1.5E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VAB027_2393 b695e5c4c2d82c636c71342a96c2f937 217 SUPERFAMILY SSF56925 17 217 1.1E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_2393 b695e5c4c2d82c636c71342a96c2f937 217 Pfam PF13505 Outer membrane protein beta-barrel domain 6 205 3.1E-11 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_2393 b695e5c4c2d82c636c71342a96c2f937 217 Gene3D G3DSA:2.40.160.20 16 217 3.2E-16 T 14-10-2018 VAB027_2613 91fd99df7e61f7dbb0476f42db3449b1 404 Gene3D G3DSA:3.40.640.10 53 294 2.8E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2613 91fd99df7e61f7dbb0476f42db3449b1 404 SUPERFAMILY SSF53383 6 399 7.98E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_2613 91fd99df7e61f7dbb0476f42db3449b1 404 Pfam PF00155 Aminotransferase class I and II 61 392 1.9E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_2613 91fd99df7e61f7dbb0476f42db3449b1 404 Gene3D G3DSA:3.90.1150.10 21 398 2.8E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_2267 6d2a59f252b4dfeefbd5c0cb01cfe75e 182 Pfam PF07209 Protein of unknown function (DUF1415) 6 173 7.1E-67 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 VAB027_2697 963fd4f4906b6e2654e4adaa82215daf 164 SMART SM00260 16 153 2.2E-49 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2697 963fd4f4906b6e2654e4adaa82215daf 164 Pfam PF01584 CheW-like domain 20 156 1.2E-39 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAB027_2697 963fd4f4906b6e2654e4adaa82215daf 164 Gene3D G3DSA:2.40.50.180 39 148 5.2E-43 T 14-10-2018 VAB027_2697 963fd4f4906b6e2654e4adaa82215daf 164 SUPERFAMILY SSF50341 14 158 2.35E-41 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAB027_2697 963fd4f4906b6e2654e4adaa82215daf 164 Gene3D G3DSA:2.30.30.40 22 147 5.2E-43 T 14-10-2018 VAB027_2636 2dfcdad5fc5037bf389830a4afb593b8 334 PIRSF PIRSF028696 1 334 9.3E-136 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VAB027_2636 2dfcdad5fc5037bf389830a4afb593b8 334 Pfam PF11059 Protein of unknown function (DUF2860) 32 333 1.9E-109 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VAB027_1185 36d282c0dabaf67447cdbc309bf3f9d4 299 SUPERFAMILY SSF103481 41 136 3.92E-10 T 14-10-2018 VAB027_1185 36d282c0dabaf67447cdbc309bf3f9d4 299 SUPERFAMILY SSF103481 188 283 1.7E-12 T 14-10-2018 VAB027_1185 36d282c0dabaf67447cdbc309bf3f9d4 299 Pfam PF00892 EamA-like transporter family 3 135 3.0E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1185 36d282c0dabaf67447cdbc309bf3f9d4 299 Pfam PF00892 EamA-like transporter family 151 280 1.3E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_3598 24815505f3e69f24ec57fa33aaadecf6 229 SUPERFAMILY SSF53448 1 228 6.12E-55 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3598 24815505f3e69f24ec57fa33aaadecf6 229 Pfam PF02348 Cytidylyltransferase 6 78 3.8E-20 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VAB027_3598 24815505f3e69f24ec57fa33aaadecf6 229 Gene3D G3DSA:3.90.550.10 1 226 3.7E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 Pfam PF00106 short chain dehydrogenase 5 187 5.3E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 SUPERFAMILY SSF51735 4 224 1.78E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAB027_1073 fcf927a037d5a9cedf1dfbe5fa63f439 239 Gene3D G3DSA:3.40.50.720 1 239 1.9E-75 T 14-10-2018 VAB027_2708 da38d070c8e89fe72cfbc7503e11189e 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 79 2.9E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAB027_2708 da38d070c8e89fe72cfbc7503e11189e 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 155 3.4E-37 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VAB027_2708 da38d070c8e89fe72cfbc7503e11189e 155 Gene3D G3DSA:3.40.50.1240 1 155 9.5E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VAB027_2708 da38d070c8e89fe72cfbc7503e11189e 155 SMART SM00855 2 117 3.9E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAB027_2708 da38d070c8e89fe72cfbc7503e11189e 155 SUPERFAMILY SSF53254 1 142 9.85E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 Gene3D G3DSA:3.40.190.10 112 210 1.3E-74 T 14-10-2018 VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 1.2E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 SMART SM00062 26 254 9.3E-69 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 SMART SM00079 26 253 2.9E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 Gene3D G3DSA:3.40.190.10 30 251 1.3E-74 T 14-10-2018 VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 251 6.7E-86 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VAB027_2506 5d677fbc53e72f153dc86af3abd24f16 258 SUPERFAMILY SSF53850 1 255 3.67E-70 T 14-10-2018 VAB027_1516 ec9fb289d9b0a27314ca320fd14c4d87 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.38 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1516 ec9fb289d9b0a27314ca320fd14c4d87 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.8E-8 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1516 ec9fb289d9b0a27314ca320fd14c4d87 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1516 ec9fb289d9b0a27314ca320fd14c4d87 41 SUPERFAMILY SSF57840 1 40 1.44E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1516 ec9fb289d9b0a27314ca320fd14c4d87 41 Pfam PF00444 Ribosomal protein L36 1 40 6.8E-17 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2160 d51c4caf2376807e723df6731022ee45 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 33 2.7E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAB027_2160 d51c4caf2376807e723df6731022ee45 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 3.5E-25 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VAB027_2160 d51c4caf2376807e723df6731022ee45 65 PIRSF PIRSF036704 1 65 7.5E-34 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VAB027_2160 d51c4caf2376807e723df6731022ee45 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 30 8.6E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAB027_3389 ee8540077ba64bc6e0033c0de69b0540 126 SUPERFAMILY SSF110069 6 126 9.16E-48 T 14-10-2018 IPR036767 ApaG domain superfamily VAB027_3389 ee8540077ba64bc6e0033c0de69b0540 126 Gene3D G3DSA:2.60.40.1470 1 126 6.6E-49 T 14-10-2018 IPR036767 ApaG domain superfamily VAB027_3389 ee8540077ba64bc6e0033c0de69b0540 126 Pfam PF04379 ApaG domain 18 103 7.0E-33 T 14-10-2018 IPR007474 ApaG domain VAB027_3389 ee8540077ba64bc6e0033c0de69b0540 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.743 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 Gene3D G3DSA:3.40.190.10 102 289 2.4E-35 T 14-10-2018 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 Gene3D G3DSA:3.40.190.10 163 262 2.4E-35 T 14-10-2018 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 SUPERFAMILY SSF53850 92 296 3.98E-29 T 14-10-2018 VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 Gene3D G3DSA:1.10.10.10 5 88 5.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 SUPERFAMILY SSF46785 4 84 4.51E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1161 43df8f852816f83a1ebe88c87c53eb70 301 Pfam PF03466 LysR substrate binding domain 92 293 6.3E-28 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_707 e19f8d7ad473b5800808e518521b412b 131 Pfam PF11948 Protein of unknown function (DUF3465) 10 131 3.0E-60 T 14-10-2018 IPR021856 Protein of unknown function DUF3465 VAB027_1290 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.230.10 75 167 5.2E-36 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_1290 90365e36d6492479be76ae081424fd93 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.523 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAB027_1290 90365e36d6492479be76ae081424fd93 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.5E-69 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAB027_1290 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.160.20 2 74 2.0E-31 T 14-10-2018 VAB027_1290 90365e36d6492479be76ae081424fd93 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.9E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VAB027_1290 90365e36d6492479be76ae081424fd93 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 7.3E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VAB027_1290 90365e36d6492479be76ae081424fd93 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VAB027_1290 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_1290 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54768 8 76 1.36E-23 T 14-10-2018 VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 Gene3D G3DSA:1.25.40.10 138 311 7.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 PIRSF PIRSF011521 2 547 6.8E-276 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 Gene3D G3DSA:3.40.50.2300 6 137 1.0E-17 T 14-10-2018 VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 Pfam PF00072 Response regulator receiver domain 11 127 5.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 SUPERFAMILY SSF52172 8 143 6.4E-20 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 SMART SM00448 9 127 5.5E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2298 0f2adc4240e874123a9cb6b9ee86551e 553 SUPERFAMILY SSF48452 135 301 1.07E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_673 fe859cc7b6fc3608dfa2c6b7bb1f6b09 81 Pfam PF06189 5'-nucleotidase 38 77 2.9E-9 T 14-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 VAB027_434 53d28217bb7b86863e43e4ed058d9d02 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 4.0E-35 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 VAB027_434 53d28217bb7b86863e43e4ed058d9d02 83 Pfam PF10688 Bacterial inner membrane protein 4 73 1.9E-8 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VAB027_434 53d28217bb7b86863e43e4ed058d9d02 83 Gene3D G3DSA:1.20.1280.290 26 75 2.3E-6 T 14-10-2018 VAB027_202 9955ae6466db69cca848c813f0456a06 205 PIRSF PIRSF000349 1 205 1.3E-80 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 SUPERFAMILY SSF54719 87 201 1.7E-44 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 7.1E-26 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 Gene3D G3DSA:1.10.287.990 20 83 1.8E-23 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 2.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 2.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 2.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 Gene3D G3DSA:2.40.500.20 84 200 8.8E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 8.9E-41 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_202 9955ae6466db69cca848c813f0456a06 205 SUPERFAMILY SSF46609 1 86 1.7E-29 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAB027_1757 dda61ab3efbbe3ae8299644b71dd8dae 276 Pfam PF02517 CAAX protease self-immunity 174 263 2.7E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 VAB027_1311 c2b007c2ae6cab4d4003144008fba844 215 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 37 209 38.263 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VAB027_1311 c2b007c2ae6cab4d4003144008fba844 215 SUPERFAMILY SSF52540 34 208 5.76E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1311 c2b007c2ae6cab4d4003144008fba844 215 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 21 205 2.5E-83 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VAB027_1311 c2b007c2ae6cab4d4003144008fba844 215 Gene3D G3DSA:3.40.50.300 16 214 9.7E-81 T 14-10-2018 VAB027_1311 c2b007c2ae6cab4d4003144008fba844 215 Pfam PF01583 Adenylylsulphate kinase 38 191 1.4E-71 T 14-10-2018 VAB027_2272 5189a6c5aa21b9dc9541f4eac5c6f558 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 7.0E-29 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VAB027_2272 5189a6c5aa21b9dc9541f4eac5c6f558 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 145 1.9E-33 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VAB027_2272 5189a6c5aa21b9dc9541f4eac5c6f558 414 Gene3D G3DSA:3.30.360.10 159 355 9.1E-143 T 14-10-2018 VAB027_2272 5189a6c5aa21b9dc9541f4eac5c6f558 414 Gene3D G3DSA:3.40.50.720 4 398 9.1E-143 T 14-10-2018 VAB027_2272 5189a6c5aa21b9dc9541f4eac5c6f558 414 SUPERFAMILY SSF51735 1 178 2.02E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1644 2cea34893afb99de21fbb6557bd33c77 204 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 26.106 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VAB027_1644 2cea34893afb99de21fbb6557bd33c77 204 Gene3D G3DSA:3.30.160.150 24 169 5.1E-48 T 14-10-2018 VAB027_1644 2cea34893afb99de21fbb6557bd33c77 204 Pfam PF04390 Lipopolysaccharide-assembly 49 161 5.7E-10 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.983 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.1E-40 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.4E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 SUPERFAMILY SSF50104 4 102 1.02E-33 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 Gene3D G3DSA:2.30.30.30 2 104 3.8E-39 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 SMART SM00739 4 31 5.3E-4 T 14-10-2018 IPR005824 KOW VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 Pfam PF00467 KOW motif 9 37 7.5E-6 T 14-10-2018 IPR005824 KOW VAB027_1284 72999f063f8685aa14f3587c96a7027c 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_2918 a481224736bed32ff1394ec955c08459 430 PIRSF PIRSF005353 1 430 1.1E-187 T 14-10-2018 IPR026033 Purine permease PbuG-like VAB027_2918 a481224736bed32ff1394ec955c08459 430 Pfam PF00860 Permease family 17 391 1.3E-55 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VAB027_2153 522ee527a12253450600f630a4b7536f 353 Pfam PF00793 DAHP synthetase I family 44 338 8.0E-99 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAB027_2153 522ee527a12253450600f630a4b7536f 353 PIRSF PIRSF001361 1 353 5.1E-157 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAB027_2153 522ee527a12253450600f630a4b7536f 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 1.4E-159 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAB027_2153 522ee527a12253450600f630a4b7536f 353 Gene3D G3DSA:3.20.20.70 1 351 6.2E-153 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2153 522ee527a12253450600f630a4b7536f 353 SUPERFAMILY SSF51569 8 349 1.8E-130 T 14-10-2018 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 SUPERFAMILY SSF46689 285 332 1.52E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 Pfam PF12833 Helix-turn-helix domain 255 332 1.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 SMART SM00342 249 332 8.8E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 SUPERFAMILY SSF46689 233 283 2.69E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 286 328 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 Gene3D G3DSA:1.10.10.60 224 282 2.7E-14 T 14-10-2018 VAB027_815 692983ba55b758a2dcf4a5e9f119e05e 338 Gene3D G3DSA:1.10.10.60 283 336 2.3E-13 T 14-10-2018 VAB027_583 682e8edc625786a887eaff94beb28c25 150 Pfam PF03061 Thioesterase superfamily 52 128 5.4E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAB027_583 682e8edc625786a887eaff94beb28c25 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 136 4.2E-36 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VAB027_583 682e8edc625786a887eaff94beb28c25 150 Gene3D G3DSA:3.10.129.10 1 144 2.1E-54 T 14-10-2018 VAB027_583 682e8edc625786a887eaff94beb28c25 150 SUPERFAMILY SSF54637 1 139 2.1E-29 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_1147 f9a59ce4de580b2b886f940daab7b261 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 96 242 2.7E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1147 f9a59ce4de580b2b886f940daab7b261 247 SUPERFAMILY SSF53850 24 245 3.15E-25 T 14-10-2018 VAB027_1147 f9a59ce4de580b2b886f940daab7b261 247 Gene3D G3DSA:3.40.190.10 107 208 4.5E-14 T 14-10-2018 VAB027_1147 f9a59ce4de580b2b886f940daab7b261 247 Gene3D G3DSA:3.40.190.10 30 239 4.5E-14 T 14-10-2018 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 6.1E-37 T 14-10-2018 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 Gene3D G3DSA:1.10.260.40 1 55 1.1E-21 T 14-10-2018 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 Gene3D G3DSA:3.40.50.2300 160 289 3.5E-73 T 14-10-2018 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 Gene3D G3DSA:3.40.50.2300 56 305 3.5E-73 T 14-10-2018 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 SUPERFAMILY SSF53822 61 331 8.44E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 SUPERFAMILY SSF47413 1 60 2.16E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_2969 e6eca7067ce72dcbb781e109a651077d 335 SMART SM00354 1 71 2.7E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_1905 c8b9b9bf98c35c2375593aec877c99da 259 SUPERFAMILY SSF81301 68 224 3.11E-16 T 14-10-2018 VAB027_1905 c8b9b9bf98c35c2375593aec877c99da 259 Pfam PF04607 Region found in RelA / SpoT proteins 107 207 2.5E-4 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VAB027_1905 c8b9b9bf98c35c2375593aec877c99da 259 Gene3D G3DSA:3.30.460.10 72 196 4.1E-6 T 14-10-2018 VAB027_26 0f0c53e37f63e223d631f37427d2f1a0 88 Gene3D G3DSA:1.10.1580.20 1 88 5.5E-44 T 14-10-2018 IPR038134 YihD-like superfamily VAB027_26 0f0c53e37f63e223d631f37427d2f1a0 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VAB027_26 0f0c53e37f63e223d631f37427d2f1a0 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.5E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 Pfam PF12838 4Fe-4S dicluster domain 107 154 1.0E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 Pfam PF12838 4Fe-4S dicluster domain 36 79 8.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 Gene3D G3DSA:3.30.70.20 95 159 2.9E-12 T 14-10-2018 VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 24 161 23.237 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 Gene3D G3DSA:3.30.70.20 31 84 2.5E-10 T 14-10-2018 VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 SUPERFAMILY SSF54862 33 157 1.47E-21 T 14-10-2018 VAB027_493 ab4ff1683c4b7e7d56114d7755a30ce6 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 8 156 1.7E-43 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VAB027_951 05c87bf4e866ef06c1fef16c49e6d61a 155 Pfam PF00174 Oxidoreductase molybdopterin binding domain 51 123 2.0E-5 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VAB027_951 05c87bf4e866ef06c1fef16c49e6d61a 155 SUPERFAMILY SSF56524 27 153 4.32E-16 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VAB027_3675 5bbdfcc76d0259afc215482b23896deb 300 SUPERFAMILY SSF103481 187 289 1.15E-8 T 14-10-2018 VAB027_3675 5bbdfcc76d0259afc215482b23896deb 300 Pfam PF00892 EamA-like transporter family 10 143 4.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_3675 5bbdfcc76d0259afc215482b23896deb 300 TIGRFAM TIGR00688 rarD: protein RarD 9 263 5.7E-84 T 14-10-2018 IPR004626 RarD protein GO:0005887 VAB027_3675 5bbdfcc76d0259afc215482b23896deb 300 SUPERFAMILY SSF103481 44 144 1.44E-12 T 14-10-2018 VAB027_2996 23015528ee09398e2ed18573a0a7f671 141 PIRSF PIRSF028680 1 141 5.8E-71 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VAB027_2996 23015528ee09398e2ed18573a0a7f671 141 SUPERFAMILY SSF56935 29 134 4.03E-5 T 14-10-2018 VAB027_1510 c073db55b85a896d809e39f73ad7a172 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 2.3E-21 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VAB027_1155 62cb116f560b61627c5f4822fae5f2ec 382 Pfam PF07690 Major Facilitator Superfamily 2 321 4.4E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_1155 62cb116f560b61627c5f4822fae5f2ec 382 SUPERFAMILY SSF103473 3 369 3.4E-51 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1155 62cb116f560b61627c5f4822fae5f2ec 382 ProSitePatterns PS00216 Sugar transport proteins signature 1. 39 56 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VAB027_1155 62cb116f560b61627c5f4822fae5f2ec 382 Gene3D G3DSA:1.20.1250.20 1 369 2.4E-44 T 14-10-2018 VAB027_3274 115e887b9452b890cf1099c660c40bd5 367 Pfam PF03969 AFG1-like ATPase 1 364 4.0E-175 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VAB027_3274 115e887b9452b890cf1099c660c40bd5 367 Gene3D G3DSA:3.40.50.300 5 189 8.2E-20 T 14-10-2018 VAB027_3274 115e887b9452b890cf1099c660c40bd5 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 54.522 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VAB027_3274 115e887b9452b890cf1099c660c40bd5 367 SUPERFAMILY SSF52540 62 201 9.16E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 Gene3D G3DSA:3.30.1370.120 252 319 4.8E-11 T 14-10-2018 IPR038591 NolW-like superfamily VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 4.5E-20 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 571 4.5E-20 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 320 330 4.5E-20 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 431 4.5E-20 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 552 4.5E-20 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 Pfam PF03958 Bacterial type II/III secretion system short domain 255 320 4.1E-12 T 14-10-2018 IPR005644 NolW-like VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 SMART SM00965 181 229 1.6E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 156 569 3.5E-160 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 Gene3D G3DSA:2.60.40.3470 18 138 4.8E-18 T 14-10-2018 VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 Gene3D G3DSA:3.55.50.30 139 251 6.2E-36 T 14-10-2018 VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 515 548 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VAB027_260 0b9a751a7d94732c6b7fde9aec3724e9 571 Pfam PF00263 Bacterial type II and III secretion system protein 411 569 1.1E-45 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 Pfam PF12161 HsdM N-terminal domain 12 140 3.9E-21 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 Gene3D G3DSA:1.20.1260.30 4 143 2.7E-36 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 SUPERFAMILY SSF53335 11 531 1.09E-134 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 Pfam PF02384 N-6 DNA Methylase 154 491 6.6E-111 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 Gene3D G3DSA:3.40.50.150 155 475 3.0E-116 T 14-10-2018 VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 201 215 6.9E-21 T 14-10-2018 VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 275 287 6.9E-21 T 14-10-2018 VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 335 6.9E-21 T 14-10-2018 VAB027_1460 57ae2b4673982d5868087f03eeaca2c1 532 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 6.9E-21 T 14-10-2018 VAB027_329 51a67392b9c78935e7accc62e550aa2f 412 Gene3D G3DSA:2.40.160.60 22 412 3.1E-120 T 14-10-2018 VAB027_329 51a67392b9c78935e7accc62e550aa2f 412 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 411 1.4E-144 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAB027_329 51a67392b9c78935e7accc62e550aa2f 412 SUPERFAMILY SSF56935 22 411 1.05E-92 T 14-10-2018 VAB027_548 c30a52e7bb7a08f46b217ab550920e3e 252 Gene3D G3DSA:3.40.50.720 4 252 1.2E-88 T 14-10-2018 VAB027_548 c30a52e7bb7a08f46b217ab550920e3e 252 Pfam PF00899 ThiF family 12 245 8.9E-65 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAB027_548 c30a52e7bb7a08f46b217ab550920e3e 252 SUPERFAMILY SSF69572 4 250 5.36E-86 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAB027_548 c30a52e7bb7a08f46b217ab550920e3e 252 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 2.4E-129 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VAB027_1094 d8982fb2fc4be81a1f265615e6d9f0c4 237 Pfam PF00005 ABC transporter 17 160 9.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1094 d8982fb2fc4be81a1f265615e6d9f0c4 237 Gene3D G3DSA:3.40.50.300 1 237 1.5E-78 T 14-10-2018 VAB027_1094 d8982fb2fc4be81a1f265615e6d9f0c4 237 SMART SM00382 26 208 2.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1094 d8982fb2fc4be81a1f265615e6d9f0c4 237 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1094 d8982fb2fc4be81a1f265615e6d9f0c4 237 SUPERFAMILY SSF52540 1 230 1.24E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1094 d8982fb2fc4be81a1f265615e6d9f0c4 237 PIRSF PIRSF039085 1 236 1.1E-99 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 140 3.2E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 118 128 3.2E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 157 169 3.2E-12 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Gene3D G3DSA:2.10.109.10 87 209 5.5E-45 T 14-10-2018 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 2.8E-81 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Pfam PF00717 Peptidase S24-like 121 187 8.3E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Hamap MF_00015 LexA repressor [lexA]. 3 206 32.151 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 SUPERFAMILY SSF46785 3 69 1.06E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 SUPERFAMILY SSF51306 82 205 1.48E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VAB027_83 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Gene3D G3DSA:1.10.10.10 1 69 4.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1086 0051dae1709bed9f996b5ce7563482b9 311 SUPERFAMILY SSF55347 121 264 9.48E-49 T 14-10-2018 VAB027_1086 0051dae1709bed9f996b5ce7563482b9 311 SUPERFAMILY SSF51735 1 166 1.11E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1086 0051dae1709bed9f996b5ce7563482b9 311 Gene3D G3DSA:3.40.50.720 1 118 2.0E-26 T 14-10-2018 VAB027_1086 0051dae1709bed9f996b5ce7563482b9 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 2.4E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAB027_1086 0051dae1709bed9f996b5ce7563482b9 311 Gene3D G3DSA:3.30.360.10 119 311 5.2E-64 T 14-10-2018 VAB027_2897 68044e63e0c644a2a6ea2b8ee532296e 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.45 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VAB027_2897 68044e63e0c644a2a6ea2b8ee532296e 250 SUPERFAMILY SSF64005 10 234 6.15E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VAB027_2897 68044e63e0c644a2a6ea2b8ee532296e 250 Gene3D G3DSA:3.40.1180.10 1 239 1.9E-95 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VAB027_2897 68044e63e0c644a2a6ea2b8ee532296e 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.1E-81 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VAB027_2897 68044e63e0c644a2a6ea2b8ee532296e 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VAB027_2897 68044e63e0c644a2a6ea2b8ee532296e 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.4E-95 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 316 7.4E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 Gene3D G3DSA:3.30.70.270 162 322 2.2E-41 T 14-10-2018 VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 Pfam PF01590 GAF domain 28 156 3.1E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 SUPERFAMILY SSF55781 28 159 6.54E-28 T 14-10-2018 VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 SMART SM00267 151 323 8.1E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 315 3.7E-35 T 14-10-2018 IPR000160 GGDEF domain VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 SMART SM00065 26 168 3.3E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 Gene3D G3DSA:3.30.450.40 5 161 9.7E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_1190 5ec732a1e4422bf7393f8552a0ee14c1 324 SUPERFAMILY SSF55073 169 316 1.65E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2204 e6c2ca5fb417473635118504a63346cd 374 SMART SM00849 91 285 7.9E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_2204 e6c2ca5fb417473635118504a63346cd 374 SUPERFAMILY SSF56281 72 313 1.31E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2204 e6c2ca5fb417473635118504a63346cd 374 Gene3D G3DSA:3.60.15.10 68 310 1.4E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_2204 e6c2ca5fb417473635118504a63346cd 374 Pfam PF00753 Metallo-beta-lactamase superfamily 92 270 3.7E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_53 a0409c0fea84cc17302b3a37e75b169a 645 Gene3D G3DSA:3.20.20.540 214 527 2.6E-155 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAB027_53 a0409c0fea84cc17302b3a37e75b169a 645 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 1.4E-219 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAB027_53 a0409c0fea84cc17302b3a37e75b169a 645 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 100.109 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAB027_53 a0409c0fea84cc17302b3a37e75b169a 645 Pfam PF01964 Radical SAM ThiC family 144 592 2.0E-201 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAB027_53 a0409c0fea84cc17302b3a37e75b169a 645 Pfam PF13667 ThiC-associated domain 22 103 1.6E-32 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAB027_3213 9d40c4697baee02210de36a4e8182725 209 PIRSF PIRSF005461 1 209 5.7E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VAB027_3213 9d40c4697baee02210de36a4e8182725 209 SUPERFAMILY SSF53335 30 209 1.7E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_3213 9d40c4697baee02210de36a4e8182725 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.605 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VAB027_3213 9d40c4697baee02210de36a4e8182725 209 Gene3D G3DSA:3.40.50.150 30 209 1.2E-58 T 14-10-2018 VAB027_3213 9d40c4697baee02210de36a4e8182725 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 6.2E-56 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VAB027_617 3cba28471ba41ca7a4d3ca3bdfbe8e18 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 1.6E-150 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 VAB027_617 3cba28471ba41ca7a4d3ca3bdfbe8e18 543 SUPERFAMILY SSF52540 1 326 8.26E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_617 3cba28471ba41ca7a4d3ca3bdfbe8e18 543 Gene3D G3DSA:3.40.50.300 1 339 1.3E-17 T 14-10-2018 VAB027_347 ea8266265189f8c27e15800d759e64b8 161 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 1.2E-25 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAB027_347 ea8266265189f8c27e15800d759e64b8 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAB027_347 ea8266265189f8c27e15800d759e64b8 161 SUPERFAMILY SSF53927 7 140 5.22E-31 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAB027_347 ea8266265189f8c27e15800d759e64b8 161 Gene3D G3DSA:3.40.140.10 2 156 2.5E-40 T 14-10-2018 VAB027_347 ea8266265189f8c27e15800d759e64b8 161 PIRSF PIRSF006019 1 147 6.1E-44 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 SUPERFAMILY SSF53850 92 306 2.71E-43 T 14-10-2018 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 Pfam PF03466 LysR substrate binding domain 97 307 3.8E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 6.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 SUPERFAMILY SSF46785 7 87 5.83E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 Gene3D G3DSA:3.40.190.10 94 304 1.0E-54 T 14-10-2018 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 Gene3D G3DSA:3.40.190.10 182 280 1.0E-54 T 14-10-2018 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 Gene3D G3DSA:1.10.10.10 2 89 1.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_60 bb63ba0e1db2f0379439b3cb5e2d5829 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_985 b32eca34f978069733b67bb8b092081a 276 Pfam PF08668 HDOD domain 13 204 2.6E-54 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAB027_985 b32eca34f978069733b67bb8b092081a 276 SUPERFAMILY SSF109604 4 229 2.55E-58 T 14-10-2018 VAB027_985 b32eca34f978069733b67bb8b092081a 276 Gene3D G3DSA:1.10.3210.10 2 274 1.1E-70 T 14-10-2018 VAB027_187 e44663e4ea88918b11bc3035b6298730 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 15 204 3.6E-62 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VAB027_187 e44663e4ea88918b11bc3035b6298730 223 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.606 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VAB027_187 e44663e4ea88918b11bc3035b6298730 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 8.3E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VAB027_2554 fb76122b2e1b44441f210cb9aa01a6f9 256 PIRSF PIRSF020736 2 256 5.4E-94 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VAB027_2554 fb76122b2e1b44441f210cb9aa01a6f9 256 Gene3D G3DSA:1.20.1260.10 95 256 2.0E-55 T 14-10-2018 IPR012347 Ferritin-like VAB027_2554 fb76122b2e1b44441f210cb9aa01a6f9 256 Gene3D G3DSA:1.20.1260.10 7 74 7.0E-16 T 14-10-2018 IPR012347 Ferritin-like VAB027_2554 fb76122b2e1b44441f210cb9aa01a6f9 256 SUPERFAMILY SSF47240 11 255 1.13E-74 T 14-10-2018 IPR009078 Ferritin-like superfamily VAB027_2554 fb76122b2e1b44441f210cb9aa01a6f9 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 252 1.3E-126 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VAB027_2302 90cda5fbc7a123d71b2aa9c4ae5c75af 287 SUPERFAMILY SSF103481 181 279 1.96E-11 T 14-10-2018 VAB027_2302 90cda5fbc7a123d71b2aa9c4ae5c75af 287 SUPERFAMILY SSF103481 40 141 1.07E-10 T 14-10-2018 VAB027_2302 90cda5fbc7a123d71b2aa9c4ae5c75af 287 Pfam PF00892 EamA-like transporter family 7 137 7.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_2302 90cda5fbc7a123d71b2aa9c4ae5c75af 287 Pfam PF00892 EamA-like transporter family 149 278 3.0E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_2197 9e43f4d4656ba7eb5494240d01e661ed 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 2.9E-37 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VAB027_2197 9e43f4d4656ba7eb5494240d01e661ed 236 SUPERFAMILY SSF51695 4 235 8.79E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAB027_2197 9e43f4d4656ba7eb5494240d01e661ed 236 Gene3D G3DSA:3.20.20.190 1 236 1.1E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAB027_684 79c6dda35a572d0f116765693b65cc36 167 Pfam PF05163 DinB family 6 161 1.3E-17 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB VAB027_684 79c6dda35a572d0f116765693b65cc36 167 SUPERFAMILY SSF109854 7 153 4.21E-27 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VAB027_684 79c6dda35a572d0f116765693b65cc36 167 Gene3D G3DSA:1.20.120.450 1 156 7.0E-23 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VAB027_577 698582925dfe3c08b14250ee2a7ea1e4 198 Gene3D G3DSA:1.10.357.10 72 191 2.8E-16 T 14-10-2018 VAB027_577 698582925dfe3c08b14250ee2a7ea1e4 198 SUPERFAMILY SSF46689 2 67 2.67E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_577 698582925dfe3c08b14250ee2a7ea1e4 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 2.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_577 698582925dfe3c08b14250ee2a7ea1e4 198 SUPERFAMILY SSF48498 83 182 7.19E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAB027_577 698582925dfe3c08b14250ee2a7ea1e4 198 Gene3D G3DSA:1.10.10.60 1 65 5.1E-22 T 14-10-2018 VAB027_396 4270dd3b67d247760d4963473edcfc51 815 Pfam PF02687 FtsX-like permease family 722 799 4.8E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_895 0a49cdabf5a51e9a6fdc610a5613c634 355 SUPERFAMILY SSF51695 27 353 8.89E-89 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAB027_895 0a49cdabf5a51e9a6fdc610a5613c634 355 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 348 9.4E-65 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VAB027_895 0a49cdabf5a51e9a6fdc610a5613c634 355 Gene3D G3DSA:3.20.20.190 25 354 3.2E-120 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 Gene3D G3DSA:3.40.50.300 22 241 1.5E-65 T 14-10-2018 VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 Pfam PF00005 ABC transporter 40 181 5.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 Gene3D G3DSA:2.40.50.140 300 359 1.8E-28 T 14-10-2018 VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 SUPERFAMILY SSF50331 256 376 1.16E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 SMART SM00382 48 231 8.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 Gene3D G3DSA:2.40.50.940 242 368 1.8E-28 T 14-10-2018 VAB027_2195 ff26c7963e2e43799308fa2d1830920c 390 SUPERFAMILY SSF52540 22 262 3.33E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 406 415 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 SMART SM00382 213 356 3.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 Gene3D G3DSA:1.10.10.60 474 529 7.1E-10 T 14-10-2018 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 Pfam PF02954 Bacterial regulatory protein, Fis family 486 521 2.9E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 508 528 1.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 491 508 1.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 SUPERFAMILY SSF52540 193 424 6.25E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 Pfam PF00158 Sigma-54 interaction domain 193 359 1.1E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 Gene3D G3DSA:1.10.8.60 365 443 1.2E-15 T 14-10-2018 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 SUPERFAMILY SSF46689 474 527 2.04E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 Gene3D G3DSA:3.40.50.300 179 364 1.1E-62 T 14-10-2018 VAB027_912 2d89e26ba715b3c1c9ec320626794dfd 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_2117 29a00bdfd0191eb2c144d0d2e0670b82 395 Pfam PF10442 FIST C domain 230 374 1.2E-16 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VAB027_2117 29a00bdfd0191eb2c144d0d2e0670b82 395 SMART SM01204 227 375 2.8E-30 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VAB027_2117 29a00bdfd0191eb2c144d0d2e0670b82 395 SMART SM00897 27 226 1.5E-40 T 14-10-2018 IPR013702 FIST domain, N-terminal VAB027_2117 29a00bdfd0191eb2c144d0d2e0670b82 395 Pfam PF08495 FIST N domain 35 225 2.9E-26 T 14-10-2018 IPR013702 FIST domain, N-terminal VAB027_1446 c8b5d18bf7f3824299570b00766e6716 90 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 83 2.2E-21 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAB027_1446 c8b5d18bf7f3824299570b00766e6716 90 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 90 29.664 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VAB027_1446 c8b5d18bf7f3824299570b00766e6716 90 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 88 2.5E-31 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAB027_918 5fb599afe815377730437ef04c02b6d6 338 Pfam PF06996 Type VI secretion, TssG 28 324 1.0E-90 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VAB027_918 5fb599afe815377730437ef04c02b6d6 338 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 28 324 4.5E-101 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VAB027_2409 0a6e8741c35114466aa527e27d0a2c83 183 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 99 9.5E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2409 0a6e8741c35114466aa527e27d0a2c83 183 Gene3D G3DSA:1.10.10.10 5 108 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2409 0a6e8741c35114466aa527e27d0a2c83 183 SUPERFAMILY SSF46894 5 100 1.25E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2409 0a6e8741c35114466aa527e27d0a2c83 183 SMART SM00862 24 99 1.1E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 Gene3D G3DSA:3.40.50.2020 276 440 2.7E-157 T 14-10-2018 VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 SUPERFAMILY SSF56235 2 256 6.52E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 Gene3D G3DSA:3.60.20.10 2 411 2.7E-157 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.622 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.8E-165 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 PIRSF PIRSF000485 1 480 9.8E-169 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 Pfam PF13522 Glutamine amidotransferase domain 64 199 2.4E-17 T 14-10-2018 VAB027_1689 06c5663d84b58f2ba2a9dde497451112 504 SUPERFAMILY SSF53271 249 482 4.59E-70 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 Pfam PF00072 Response regulator receiver domain 4 112 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 SMART SM00862 148 224 1.4E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 SUPERFAMILY SSF46894 125 225 8.79E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 SUPERFAMILY SSF52172 1 119 3.56E-38 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-36 T 14-10-2018 VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 SMART SM00448 2 111 4.5E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_204 0484ccd80d9461fcbd36c2bce6cd543e 228 Gene3D G3DSA:1.10.10.10 126 228 2.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1553 233c2c995bb66ef8dfd4f7be3fcc64f8 109 Pfam PF11985 Protein of unknown function (DUF3486) 10 60 3.3E-6 T 14-10-2018 IPR021874 Bacteriophage Mu, Gp27 VAB027_2729 bc68222d0cad8ac7dd5767d2134d2614 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 238 2.2E-58 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VAB027_2729 bc68222d0cad8ac7dd5767d2134d2614 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.4E-65 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VAB027_2729 bc68222d0cad8ac7dd5767d2134d2614 252 Gene3D G3DSA:3.40.1390.30 97 223 2.6E-81 T 14-10-2018 VAB027_2729 bc68222d0cad8ac7dd5767d2134d2614 252 SUPERFAMILY SSF102705 1 251 1.44E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VAB027_2729 bc68222d0cad8ac7dd5767d2134d2614 252 Gene3D G3DSA:3.40.1390.30 14 237 2.6E-81 T 14-10-2018 VAB027_3654 8f6d176fb2221e6debfcd41d99a1a4d8 385 SUPERFAMILY SSF52540 5 314 9.61E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3654 8f6d176fb2221e6debfcd41d99a1a4d8 385 Gene3D G3DSA:3.40.50.300 5 272 7.3E-7 T 14-10-2018 VAB027_95 9ea7be813f4d4a87a907e04d00a1e21c 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.2E-71 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VAB027_95 9ea7be813f4d4a87a907e04d00a1e21c 220 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.5E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_95 9ea7be813f4d4a87a907e04d00a1e21c 220 Gene3D G3DSA:3.40.50.300 3 201 1.0E-56 T 14-10-2018 VAB027_95 9ea7be813f4d4a87a907e04d00a1e21c 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.165 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VAB027_95 9ea7be813f4d4a87a907e04d00a1e21c 220 SUPERFAMILY SSF52540 15 198 7.11E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 1.6E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 SMART SM00304 89 141 0.0026 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 SUPERFAMILY SSF58104 109 418 1.22E-74 T 14-10-2018 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 Gene3D G3DSA:1.10.287.950 89 418 1.4E-68 T 14-10-2018 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 1.3E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.3E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 1.3E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3065 bd94ffe898e47894d73e733ec0397455 418 SMART SM00283 156 417 6.9E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1422 17f7fd5be0776ab3f9814bdea5953516 77 Gene3D G3DSA:2.10.290.10 1 70 9.1E-28 T 14-10-2018 IPR029037 YfgJ-like VAB027_1422 17f7fd5be0776ab3f9814bdea5953516 77 SUPERFAMILY SSF161187 1 69 1.09E-26 T 14-10-2018 VAB027_1422 17f7fd5be0776ab3f9814bdea5953516 77 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 1.0E-30 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VAB027_1422 17f7fd5be0776ab3f9814bdea5953516 77 Pfam PF07191 zinc-ribbons 4 67 6.2E-27 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VAB027_2514 f4854383de8887c51927d890d2d81376 246 Gene3D G3DSA:3.20.20.70 2 246 4.4E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2514 f4854383de8887c51927d890d2d81376 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.2E-109 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VAB027_2514 f4854383de8887c51927d890d2d81376 246 Pfam PF13353 4Fe-4S single cluster domain 16 133 5.0E-20 T 14-10-2018 VAB027_2514 f4854383de8887c51927d890d2d81376 246 Pfam PF04055 Radical SAM superfamily 24 178 6.4E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_2514 f4854383de8887c51927d890d2d81376 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VAB027_2514 f4854383de8887c51927d890d2d81376 246 SUPERFAMILY SSF102114 23 220 1.31E-30 T 14-10-2018 VAB027_2514 f4854383de8887c51927d890d2d81376 246 PIRSF PIRSF000371 44 245 3.5E-47 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VAB027_2514 f4854383de8887c51927d890d2d81376 246 PIRSF PIRSF000371 1 48 3.9E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VAB027_2458 4b41341af4f3025e3efeab787c28c2bd 67 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 3.2E-23 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 Pfam PF00199 Catalase 25 401 1.1E-167 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 Gene3D G3DSA:2.40.180.10 21 503 5.7E-207 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 SUPERFAMILY SSF56634 20 496 2.49E-192 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PIRSF PIRSF038928 16 496 3.1E-189 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 SMART SM01060 25 406 2.5E-244 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PRINTS PR00067 Catalase signature 101 119 4.5E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PRINTS PR00067 Catalase signature 336 362 4.5E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PRINTS PR00067 Catalase signature 304 331 4.5E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PRINTS PR00067 Catalase signature 141 159 4.5E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PRINTS PR00067 Catalase signature 122 139 4.5E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 PRINTS PR00067 Catalase signature 38 61 4.5E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 Pfam PF06628 Catalase-related immune-responsive 431 489 4.4E-20 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2225 5e5799a19434a0dda93130afc8f29095 503 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 PRINTS PR00207 Flagellin signature 111 134 1.1E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 PRINTS PR00207 Flagellin signature 76 95 1.1E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 PRINTS PR00207 Flagellin signature 37 54 1.1E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Pfam PF07196 Flagellin hook IN motif 197 246 1.6E-7 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:1.20.1330.10 287 331 1.2E-22 T 14-10-2018 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:1.20.1330.10 59 172 2.9E-53 T 14-10-2018 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:2.170.280.10 190 286 1.2E-22 T 14-10-2018 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.1E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Gene3D G3DSA:1.10.8.410 332 379 6.1E-22 T 14-10-2018 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 2.4E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAB027_2831 e23395717eb2981a5a6df995f6db4de8 379 SUPERFAMILY SSF64518 1 379 1.24E-98 T 14-10-2018 VAB027_1725 00548fe71aa28a781873db21db7dee20 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 1.2E-84 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 VAB027_381 e9c0afcd4863ffce78f1598967bfafd1 654 PIRSF PIRSF005091 2 630 4.6E-94 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like VAB027_381 e9c0afcd4863ffce78f1598967bfafd1 654 SUPERFAMILY SSF53649 284 595 2.49E-65 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAB027_381 e9c0afcd4863ffce78f1598967bfafd1 654 Pfam PF00884 Sulfatase 285 555 1.4E-42 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAB027_381 e9c0afcd4863ffce78f1598967bfafd1 654 Gene3D G3DSA:3.40.720.10 276 568 1.3E-146 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAB027_381 e9c0afcd4863ffce78f1598967bfafd1 654 Gene3D G3DSA:3.30.1120.80 275 644 1.3E-146 T 14-10-2018 VAB027_3143 4d764fd4997870123965542dc55ce243 106 Pfam PF09339 IclR helix-turn-helix domain 16 60 9.2E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VAB027_3143 4d764fd4997870123965542dc55ce243 106 Gene3D G3DSA:1.10.10.10 10 85 5.2E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3143 4d764fd4997870123965542dc55ce243 106 SUPERFAMILY SSF46785 15 84 8.3E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2761 866ddafbe1f3a6acb31dae211ee5c678 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 1.4E-33 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VAB027_2761 866ddafbe1f3a6acb31dae211ee5c678 147 Pfam PF02050 Flagellar FliJ protein 17 140 1.7E-30 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VAB027_2790 f16ec54d9ce02859df5ffbcdd4e32d08 354 Pfam PF01594 AI-2E family transporter 20 345 1.9E-79 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 Gene3D G3DSA:3.40.50.300 461 703 4.3E-75 T 14-10-2018 VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 SUPERFAMILY SSF90123 137 452 1.44E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 Pfam PF00005 ABC transporter 487 635 3.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 2.5E-292 T 14-10-2018 IPR017750 ATPase, type I secretion system VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 Gene3D G3DSA:1.20.1560.10 142 454 1.8E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 Pfam PF00664 ABC transporter transmembrane region 158 417 9.0E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 Gene3D G3DSA:3.90.70.10 1 126 3.9E-34 T 14-10-2018 VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 SUPERFAMILY SSF52540 459 693 3.63E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1049 9f1dc994b96e1fc0dab5a861edff2915 704 SMART SM00382 495 681 1.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2988 12a1ee6b22b1f8ce1823b03848dceb2a 183 Gene3D G3DSA:1.20.120.520 1 154 2.0E-15 T 14-10-2018 VAB027_2988 12a1ee6b22b1f8ce1823b03848dceb2a 183 Pfam PF01814 Hemerythrin HHE cation binding domain 3 135 8.6E-14 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VAB027_1091 bc76302fadaeeb31efaa7e977bc8a38f 298 SUPERFAMILY SSF161098 63 280 8.9E-39 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1091 bc76302fadaeeb31efaa7e977bc8a38f 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 291 4.6E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1091 bc76302fadaeeb31efaa7e977bc8a38f 298 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 62 131 5.8E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAB027_1091 bc76302fadaeeb31efaa7e977bc8a38f 298 Gene3D G3DSA:1.10.3720.10 57 294 4.9E-49 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1397 08188fc19015e59859f795999944aa30 379 Gene3D G3DSA:3.20.20.105 1 370 5.1E-175 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAB027_1397 08188fc19015e59859f795999944aa30 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 1.4E-187 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAB027_1397 08188fc19015e59859f795999944aa30 379 SUPERFAMILY SSF51713 3 366 8.89E-165 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAB027_1397 08188fc19015e59859f795999944aa30 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.682 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAB027_1397 08188fc19015e59859f795999944aa30 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.5E-96 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAB027_1397 08188fc19015e59859f795999944aa30 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 1.9E-178 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 SUPERFAMILY SSF63380 275 380 1.32E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 4.4E-30 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 2.8E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Gene3D G3DSA:3.10.20.30 508 605 2.8E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 SUPERFAMILY SSF54292 502 605 2.23E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 SUPERFAMILY SSF50800 5 264 2.88E-17 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 530 597 1.1E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Pfam PF03473 MOSC domain 139 262 1.8E-30 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 4.1E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 4.1E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 4.1E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 4.1E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 4.1E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 2.4E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Gene3D G3DSA:2.40.33.20 134 280 1.0E-5 T 14-10-2018 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 SUPERFAMILY SSF141673 6 133 3.4E-29 T 14-10-2018 VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Gene3D G3DSA:3.40.50.80 382 507 1.5E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 SUPERFAMILY SSF52343 381 513 6.16E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_1195 442f3e1f5366fa32a809686a3d224e02 605 Gene3D G3DSA:2.40.30.10 281 378 1.5E-23 T 14-10-2018 VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 Pfam PF00072 Response regulator receiver domain 8 113 2.6E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 Gene3D G3DSA:3.40.50.2300 4 127 4.4E-16 T 14-10-2018 VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 SUPERFAMILY SSF109604 133 371 2.54E-37 T 14-10-2018 VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 Gene3D G3DSA:1.10.3210.10 130 377 1.2E-36 T 14-10-2018 VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 SUPERFAMILY SSF52172 6 125 1.42E-16 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 Pfam PF08668 HDOD domain 142 278 1.2E-26 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 SMART SM00448 6 117 1.3E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1763 f7fcae3d060f2b5c1da852ed1c922e0d 380 PIRSF PIRSF036883 1 380 2.2E-197 T 14-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative VAB027_738 60f2643c2aacabc9387c947c2f333653 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 1.4E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_738 60f2643c2aacabc9387c947c2f333653 96 Gene3D G3DSA:3.30.2310.20 1 95 8.3E-29 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_738 60f2643c2aacabc9387c947c2f333653 96 SUPERFAMILY SSF143011 1 82 3.53E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_738 60f2643c2aacabc9387c947c2f333653 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 3.4E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_2655 7d22ed8aa0fe2c23b52ce94ba89ca149 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VAB027_2655 7d22ed8aa0fe2c23b52ce94ba89ca149 267 SUPERFAMILY SSF56752 1 261 1.01E-69 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VAB027_2655 7d22ed8aa0fe2c23b52ce94ba89ca149 267 Gene3D G3DSA:3.20.10.10 112 267 2.5E-52 T 14-10-2018 VAB027_2655 7d22ed8aa0fe2c23b52ce94ba89ca149 267 Pfam PF01063 Amino-transferase class IV 24 247 3.3E-45 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VAB027_2655 7d22ed8aa0fe2c23b52ce94ba89ca149 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 7.4E-107 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VAB027_2655 7d22ed8aa0fe2c23b52ce94ba89ca149 267 Gene3D G3DSA:3.30.470.10 1 107 1.2E-25 T 14-10-2018 VAB027_3219 935b13428e1f30e91da46782d81d0885 433 Gene3D G3DSA:2.70.70.10 269 398 8.3E-79 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_3219 935b13428e1f30e91da46782d81d0885 433 SUPERFAMILY SSF51261 147 393 4.66E-70 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_3219 935b13428e1f30e91da46782d81d0885 433 Pfam PF01551 Peptidase family M23 298 392 4.7E-30 T 14-10-2018 IPR016047 Peptidase M23 VAB027_3219 935b13428e1f30e91da46782d81d0885 433 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 9.3E-8 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VAB027_3219 935b13428e1f30e91da46782d81d0885 433 Gene3D G3DSA:3.10.450.350 70 163 1.2E-10 T 14-10-2018 VAB027_3219 935b13428e1f30e91da46782d81d0885 433 Gene3D G3DSA:3.10.450.350 176 411 8.3E-79 T 14-10-2018 VAB027_1662 a0165b9c35f2d8696a4ac3c755bffc18 139 SMART SM00422 1 70 2.6E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_1662 a0165b9c35f2d8696a4ac3c755bffc18 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 4.1E-63 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VAB027_1662 a0165b9c35f2d8696a4ac3c755bffc18 139 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_1662 a0165b9c35f2d8696a4ac3c755bffc18 139 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAB027_1662 a0165b9c35f2d8696a4ac3c755bffc18 139 Gene3D G3DSA:1.10.1660.10 1 125 1.3E-31 T 14-10-2018 VAB027_1662 a0165b9c35f2d8696a4ac3c755bffc18 139 SUPERFAMILY SSF46955 1 126 1.54E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_2500 7e361c243371bea87e6749a477315ea1 182 Pfam PF07445 Primosomal replication protein priC 6 179 2.7E-50 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC VAB027_2500 7e361c243371bea87e6749a477315ea1 182 Gene3D G3DSA:1.20.1270.340 2 99 4.0E-16 T 14-10-2018 IPR038338 PriB/PriC superfamily VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 Gene3D G3DSA:2.40.50.100 75 153 1.3E-31 T 14-10-2018 VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 SUPERFAMILY SSF51230 78 153 5.5E-26 T 14-10-2018 IPR011053 Single hybrid motif VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 Pfam PF00364 Biotin-requiring enzyme 79 152 1.4E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.5E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.5E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.5E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAB027_3550 9410f9f2074b5a276f2585a875fa6eb1 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 4.3E-62 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 8.3E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 Gene3D G3DSA:3.40.190.10 6 216 7.3E-85 T 14-10-2018 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 5.0E-114 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 SUPERFAMILY SSF53850 4 219 3.83E-86 T 14-10-2018 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 Gene3D G3DSA:3.40.190.10 100 199 7.3E-85 T 14-10-2018 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 5.0E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 PIRSF PIRSF001438 1 310 3.0E-121 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 2.5E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.5E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 2.5E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 2.5E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 2.5E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 Gene3D G3DSA:3.30.160.40 221 306 6.9E-29 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.759 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 SUPERFAMILY SSF54782 220 309 3.14E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_104 92e6bfec18c1b6733e913cbe93c6f574 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAB027_65 bfbca992dd91e9aafa58eb250a0f433b 261 Gene3D G3DSA:3.40.1630.10 2 56 2.6E-17 T 14-10-2018 VAB027_65 bfbca992dd91e9aafa58eb250a0f433b 261 SUPERFAMILY SSF53335 4 255 2.52E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_65 bfbca992dd91e9aafa58eb250a0f433b 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.388 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VAB027_65 bfbca992dd91e9aafa58eb250a0f433b 261 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 2.1E-107 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VAB027_65 bfbca992dd91e9aafa58eb250a0f433b 261 Gene3D G3DSA:3.40.50.150 57 260 3.3E-76 T 14-10-2018 VAB027_366 609b7d75936b352099138afd497164c9 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 Gene3D G3DSA:2.30.33.40 1 96 2.3E-32 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 SMART SM00883 2 95 1.5E-39 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.741 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 82 95 4.7E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.7E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.7E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.7E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_366 609b7d75936b352099138afd497164c9 96 SUPERFAMILY SSF50129 1 96 7.77E-28 T 14-10-2018 IPR011032 GroES-like superfamily VAB027_366 609b7d75936b352099138afd497164c9 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.3E-29 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAB027_2133 094867feac9a8d24fd2aae74fd207bfe 80 SUPERFAMILY SSF52833 1 73 1.18E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_2133 094867feac9a8d24fd2aae74fd207bfe 80 Gene3D G3DSA:3.40.30.10 1 79 1.0E-21 T 14-10-2018 VAB027_2133 094867feac9a8d24fd2aae74fd207bfe 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 4.1E-21 T 14-10-2018 IPR008554 Glutaredoxin-like VAB027_915 820e90fa28cc40358b182fb61eeb6c55 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.0E-157 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VAB027_915 820e90fa28cc40358b182fb61eeb6c55 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 2.3E-156 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VAB027_536 430eba722ce65cf589b3c4f65eb314c1 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 315 5.7E-18 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAB027_536 430eba722ce65cf589b3c4f65eb314c1 323 SUPERFAMILY SSF52283 1 123 2.98E-21 T 14-10-2018 VAB027_536 430eba722ce65cf589b3c4f65eb314c1 323 Gene3D G3DSA:3.40.50.720 2 307 2.0E-121 T 14-10-2018 VAB027_536 430eba722ce65cf589b3c4f65eb314c1 323 SUPERFAMILY SSF51735 106 289 1.39E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_536 430eba722ce65cf589b3c4f65eb314c1 323 Gene3D G3DSA:3.40.50.720 102 292 2.0E-121 T 14-10-2018 VAB027_536 430eba722ce65cf589b3c4f65eb314c1 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 1.1E-47 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 Pfam PF16458 Beta-prism lectin 822 955 4.7E-54 T 14-10-2018 IPR032496 Hemolysin, beta-prism lectin VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 Pfam PF16458 Beta-prism lectin 508 637 1.5E-55 T 14-10-2018 IPR032496 Hemolysin, beta-prism lectin VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 ProSitePatterns PS00018 EF-hand calcium-binding domain. 255 267 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 Gene3D G3DSA:2.100.10.30 820 957 1.4E-35 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 Gene3D G3DSA:2.100.10.30 503 639 1.4E-35 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 SUPERFAMILY SSF69318 252 487 2.44E-16 T 14-10-2018 VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 Gene3D G3DSA:2.60.20.40 21 119 2.0E-44 T 14-10-2018 VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 Gene3D G3DSA:2.60.20.40 120 216 6.2E-43 T 14-10-2018 VAB027_1622 6cf2b082fda4f39a3e4fd0fc9488bf0a 957 SUPERFAMILY SSF69318 396 795 1.57E-9 T 14-10-2018 VAB027_2194 9ac5ca21e4402b8e5337265ed833a0c3 280 Gene3D G3DSA:1.10.3720.10 3 273 5.5E-49 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2194 9ac5ca21e4402b8e5337265ed833a0c3 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 2.0E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2194 9ac5ca21e4402b8e5337265ed833a0c3 280 SUPERFAMILY SSF161098 7 277 1.22E-52 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3639 3d9385d07fcdf349c9f477c2ada67ace 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.304 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_3639 3d9385d07fcdf349c9f477c2ada67ace 213 Gene3D G3DSA:3.40.50.2020 1 213 7.3E-80 T 14-10-2018 VAB027_3639 3d9385d07fcdf349c9f477c2ada67ace 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 3.6E-70 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_3639 3d9385d07fcdf349c9f477c2ada67ace 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 5.2E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAB027_3639 3d9385d07fcdf349c9f477c2ada67ace 213 SUPERFAMILY SSF53271 2 211 1.7E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VAB027_810 d8c674a00807a86b0168ab395d9b9c29 189 Gene3D G3DSA:3.10.450.50 22 189 1.3E-19 T 14-10-2018 VAB027_810 d8c674a00807a86b0168ab395d9b9c29 189 PIRSF PIRSF028288 1 189 1.7E-101 T 14-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 VAB027_810 d8c674a00807a86b0168ab395d9b9c29 189 SUPERFAMILY SSF54427 125 185 4.93E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_2214 3f42db55b1ccf2ce7b872cfc3552b871 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 111 4.5E-47 T 14-10-2018 IPR007437 Protein of unknown function DUF486 VAB027_2214 3f42db55b1ccf2ce7b872cfc3552b871 116 PIRSF PIRSF021239 1 114 1.6E-57 T 14-10-2018 IPR007437 Protein of unknown function DUF486 VAB027_615 199d10df2029429df1a55da7366d9388 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 307 2.4E-103 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VAB027_615 199d10df2029429df1a55da7366d9388 318 Pfam PF03741 Integral membrane protein TerC family 75 275 8.3E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VAB027_1730 f1d59532cbff984e7bbcf0ca670c0350 291 SUPERFAMILY SSF53850 88 288 1.49E-38 T 14-10-2018 VAB027_1730 f1d59532cbff984e7bbcf0ca670c0350 291 SUPERFAMILY SSF46785 1 84 6.86E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1730 f1d59532cbff984e7bbcf0ca670c0350 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.8E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1730 f1d59532cbff984e7bbcf0ca670c0350 291 Pfam PF03466 LysR substrate binding domain 88 285 6.4E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1730 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:3.40.190.290 90 291 3.8E-78 T 14-10-2018 VAB027_1730 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:1.10.10.10 1 89 2.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2961 5305d1a2fb8fe61a7ccedb86acfce697 394 Pfam PF05940 NnrS protein 16 388 2.1E-106 T 14-10-2018 IPR010266 NnrS VAB027_2051 c5856dbfd9ab74274a2659faffd465c4 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.8E-53 T 14-10-2018 IPR021212 Domain of unknown function DUF2760 VAB027_1003 83af71b1887f3c6d3da5a08e9820098a 175 Pfam PF13503 Domain of unknown function (DUF4123) 10 126 6.1E-11 T 14-10-2018 IPR025391 Domain of unknown function DUF4123 VAB027_1440 8a7cc8c9caa99d39d9b04b2022859e9f 109 SUPERFAMILY SSF143410 1 105 3.79E-33 T 14-10-2018 IPR023389 DOPA-like superfamily VAB027_1440 8a7cc8c9caa99d39d9b04b2022859e9f 109 Gene3D G3DSA:3.30.70.1240 1 109 1.5E-26 T 14-10-2018 IPR023389 DOPA-like superfamily VAB027_1440 8a7cc8c9caa99d39d9b04b2022859e9f 109 PIRSF PIRSF028139 1 107 2.7E-42 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VAB027_1440 8a7cc8c9caa99d39d9b04b2022859e9f 109 Pfam PF08883 Dopa 4,5-dioxygenase family 2 102 1.5E-25 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 711 8.3E-118 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 Gene3D G3DSA:2.40.170.20 171 711 1.9E-118 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 Gene3D G3DSA:2.170.130.10 28 156 1.9E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 Pfam PF00593 TonB dependent receptor 252 709 6.6E-61 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 150 6.8E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 711 7.9E-138 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VAB027_586 2f0c163a8a80efca0df67dfd73f3a30d 711 SUPERFAMILY SSF56935 18 711 3.66E-113 T 14-10-2018 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 SUPERFAMILY SSF53822 61 312 2.75E-38 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_640 8f20575ff653aca7204e709a28a75bed 326 Gene3D G3DSA:3.40.50.2300 155 326 7.9E-26 T 14-10-2018 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 SMART SM00354 1 73 4.1E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 SUPERFAMILY SSF47413 1 58 1.33E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 1.3E-137 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 Gene3D G3DSA:1.10.260.40 1 61 5.3E-25 T 14-10-2018 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 Gene3D G3DSA:3.40.50.2300 62 154 2.6E-19 T 14-10-2018 VAB027_640 8f20575ff653aca7204e709a28a75bed 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 211 1.4E-13 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAB027_1244 8dd07fa6880e57aedc77ac11d1b00095 322 Pfam PF13730 Helix-turn-helix domain 17 67 3.0E-13 T 14-10-2018 VAB027_1244 8dd07fa6880e57aedc77ac11d1b00095 322 SUPERFAMILY SSF46785 24 72 1.28E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1244 8dd07fa6880e57aedc77ac11d1b00095 322 Gene3D G3DSA:1.10.10.10 8 110 7.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_762 495a4de04983353a0068f049ef0d0a21 177 Pfam PF01202 Shikimate kinase 10 43 5.4E-5 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAB027_762 495a4de04983353a0068f049ef0d0a21 177 Gene3D G3DSA:3.40.50.300 1 163 2.8E-16 T 14-10-2018 VAB027_762 495a4de04983353a0068f049ef0d0a21 177 SUPERFAMILY SSF52540 1 154 1.52E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2845 f3c31e686fc3b7996e2d5f68fbfec936 247 SMART SM00858 125 187 2.4E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VAB027_2845 f3c31e686fc3b7996e2d5f68fbfec936 247 Pfam PF13144 Chaperone for flagella basal body P-ring formation 48 245 3.7E-51 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VAB027_2845 f3c31e686fc3b7996e2d5f68fbfec936 247 Gene3D G3DSA:2.30.30.760 187 247 1.5E-11 T 14-10-2018 VAB027_2845 f3c31e686fc3b7996e2d5f68fbfec936 247 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 113 245 3.4E-38 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VAB027_2573 bb688aec424e7dbdb81346c08dec3c68 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 458 1.7E-151 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VAB027_2573 bb688aec424e7dbdb81346c08dec3c68 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 44.054 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VAB027_3178 4d11f46181eba443289d2a3c434ccc75 344 Gene3D G3DSA:3.20.20.100 1 344 1.7E-133 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAB027_3178 4d11f46181eba443289d2a3c434ccc75 344 SUPERFAMILY SSF51430 1 344 8.25E-109 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAB027_3178 4d11f46181eba443289d2a3c434ccc75 344 Pfam PF00248 Aldo/keto reductase family 15 335 2.8E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VAB027_3353 d67672a6ea487cf63d107caf1513bde5 231 SUPERFAMILY SSF54060 21 229 2.35E-91 T 14-10-2018 VAB027_3353 d67672a6ea487cf63d107caf1513bde5 231 Pfam PF04231 Endonuclease I 34 227 6.7E-42 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VAB027_464 7dc11a008b4f4d9110b7115d53ab5a81 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAB027_464 7dc11a008b4f4d9110b7115d53ab5a81 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 3.2E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAB027_464 7dc11a008b4f4d9110b7115d53ab5a81 125 Gene3D G3DSA:1.10.3830.10 3 122 6.9E-40 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAB027_1231 e71d010101d7a3324bd16d46edfacee1 87 SUPERFAMILY SSF52096 2 79 7.82E-18 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_1231 e71d010101d7a3324bd16d46edfacee1 87 Gene3D G3DSA:3.90.226.10 1 81 3.5E-16 T 14-10-2018 VAB027_1231 e71d010101d7a3324bd16d46edfacee1 87 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 4 18 8.5E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1231 e71d010101d7a3324bd16d46edfacee1 87 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 39 57 8.5E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_881 2d0749bd992908d15186a24583466410 158 PIRSF PIRSF019239 1 158 5.9E-44 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 VAB027_881 2d0749bd992908d15186a24583466410 158 Pfam PF01899 Na+/H+ ion antiporter subunit 7 155 3.0E-41 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 SUPERFAMILY SSF51445 258 618 2.25E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 255 1.2E-19 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 Gene3D G3DSA:3.30.379.10 131 256 1.5E-21 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 Gene3D G3DSA:3.20.20.80 257 634 1.5E-134 T 14-10-2018 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 9.0E-51 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 5.7E-117 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAB027_3235 c9bccd243eb2dae6ccdd378bbe9acf6b 637 SUPERFAMILY SSF55545 126 257 6.88E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAB027_18 5500aa59c9da57370ffcfacc48c8b4e7 312 Gene3D G3DSA:3.20.10.10 138 289 1.2E-104 T 14-10-2018 VAB027_18 5500aa59c9da57370ffcfacc48c8b4e7 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.2E-145 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VAB027_18 5500aa59c9da57370ffcfacc48c8b4e7 312 SUPERFAMILY SSF56752 7 307 1.16E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VAB027_18 5500aa59c9da57370ffcfacc48c8b4e7 312 Gene3D G3DSA:3.30.470.10 10 127 1.2E-104 T 14-10-2018 VAB027_18 5500aa59c9da57370ffcfacc48c8b4e7 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VAB027_18 5500aa59c9da57370ffcfacc48c8b4e7 312 Pfam PF01063 Amino-transferase class IV 36 268 7.0E-47 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VAB027_1994 ef36b805cc569dd0eae4868c18cc58f5 257 Pfam PF06629 MltA-interacting protein MipA 52 257 9.7E-42 T 14-10-2018 IPR010583 MltA-interacting MipA VAB027_818 db8b0b6e8805b7f0459ba16b0b3c57cb 312 Pfam PF01032 FecCD transport family 8 306 1.0E-63 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_818 db8b0b6e8805b7f0459ba16b0b3c57cb 312 Gene3D G3DSA:1.10.3470.10 1 311 2.6E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_818 db8b0b6e8805b7f0459ba16b0b3c57cb 312 SUPERFAMILY SSF81345 4 306 9.68E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_2551 ff897ea81186318e5c8f934e58508df1 398 SUPERFAMILY SSF53335 120 212 1.94E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2551 ff897ea81186318e5c8f934e58508df1 398 Pfam PF13679 Methyltransferase domain 106 230 2.1E-18 T 14-10-2018 IPR025714 Methyltransferase domain VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 65 85 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 23 43 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 128 149 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 44 64 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 107 127 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 3 22 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 86 106 7.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 3.9E-86 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 PIRSF PIRSF002560 1 157 8.0E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 Gene3D G3DSA:1.20.1260.10 1 158 1.4E-73 T 14-10-2018 IPR012347 Ferritin-like VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 Pfam PF00210 Ferritin-like domain 8 143 1.5E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VAB027_3468 7e11fafe22802b9a59fd7624ef0bfeb2 158 SUPERFAMILY SSF47240 1 153 2.9E-56 T 14-10-2018 IPR009078 Ferritin-like superfamily VAB027_3474 c13a43ebd0407d61c776fb24823ff1fe 91 Gene3D G3DSA:3.40.1260.10 1 91 5.8E-19 T 14-10-2018 IPR027396 DsrEFH-like VAB027_3474 c13a43ebd0407d61c776fb24823ff1fe 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 91 1.4E-23 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VAB027_3474 c13a43ebd0407d61c776fb24823ff1fe 91 Pfam PF04077 DsrH like protein 10 87 2.3E-20 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VAB027_3474 c13a43ebd0407d61c776fb24823ff1fe 91 SUPERFAMILY SSF75169 1 91 3.92E-21 T 14-10-2018 IPR027396 DsrEFH-like VAB027_1259 9deb855cdcf61e8e26a54b72eb588920 329 Pfam PF00561 alpha/beta hydrolase fold 61 301 8.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_1259 9deb855cdcf61e8e26a54b72eb588920 329 SUPERFAMILY SSF53474 21 299 5.0E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_1259 9deb855cdcf61e8e26a54b72eb588920 329 PIRSF PIRSF005211 2 329 5.2E-106 T 14-10-2018 IPR012020 AB hydrolase 4 family VAB027_2872 6704b9421b96308dbf75dc9bbbb25e30 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.311 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VAB027_2872 6704b9421b96308dbf75dc9bbbb25e30 191 Pfam PF13580 SIS domain 14 146 2.0E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAB027_2872 6704b9421b96308dbf75dc9bbbb25e30 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 1.9E-83 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VAB027_2872 6704b9421b96308dbf75dc9bbbb25e30 191 Gene3D G3DSA:3.40.50.10490 1 191 1.0E-72 T 14-10-2018 VAB027_2872 6704b9421b96308dbf75dc9bbbb25e30 191 SUPERFAMILY SSF53697 1 188 4.04E-53 T 14-10-2018 VAB027_1535 fb4d990c872d1341732ea28af83355fd 452 Gene3D G3DSA:3.40.50.450 121 450 7.1E-128 T 14-10-2018 VAB027_1535 fb4d990c872d1341732ea28af83355fd 452 Gene3D G3DSA:3.30.1850.10 1 120 1.4E-58 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VAB027_1535 fb4d990c872d1341732ea28af83355fd 452 Pfam PF11892 Domain of unknown function (DUF3412) 330 451 1.5E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VAB027_1535 fb4d990c872d1341732ea28af83355fd 452 SUPERFAMILY SSF102405 119 326 6.56E-40 T 14-10-2018 VAB027_1535 fb4d990c872d1341732ea28af83355fd 452 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 2.2E-51 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VAB027_1535 fb4d990c872d1341732ea28af83355fd 452 Pfam PF03641 Possible lysine decarboxylase 187 326 3.3E-37 T 14-10-2018 IPR031100 LOG family VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 Pfam PF02205 WH2 motif 245 269 7.7E-7 T 14-10-2018 IPR003124 WH2 domain GO:0003779 VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 Pfam PF02205 WH2 motif 176 197 3.4E-4 T 14-10-2018 IPR003124 WH2 domain GO:0003779 VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 Gene3D G3DSA:1.20.120.1210 292 527 1.6E-89 T 14-10-2018 VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 SMART SM00246 178 195 0.0029 T 14-10-2018 IPR003124 WH2 domain GO:0003779 VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 SMART SM00246 208 226 190.0 T 14-10-2018 IPR003124 WH2 domain GO:0003779 VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 SMART SM00246 248 267 9.0 T 14-10-2018 IPR003124 WH2 domain GO:0003779 VAB027_2431 e85e8c299695c4ba8875a2acb8665f8d 532 Gene3D G3DSA:3.30.70.2180 328 432 1.6E-89 T 14-10-2018 VAB027_2469 b995f41253838462cffcf712d7e81319 71 Gene3D G3DSA:1.10.720.30 13 70 1.1E-31 T 14-10-2018 IPR036361 SAP domain superfamily VAB027_2469 b995f41253838462cffcf712d7e81319 71 Pfam PF09905 DNA-binding protein VF530 6 67 8.4E-36 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VAB027_2325 69c928c8963bc6ce33281bab945c1334 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.4E-95 T 14-10-2018 IPR014319 Phage shock protein, PspA VAB027_2325 69c928c8963bc6ce33281bab945c1334 222 Pfam PF04012 PspA/IM30 family 2 218 4.1E-65 T 14-10-2018 IPR007157 PspA/IM30 VAB027_415 5e4db5beb6ae8d6d9df615d66db6a6c0 481 SUPERFAMILY SSF53300 318 474 7.97E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_415 5e4db5beb6ae8d6d9df615d66db6a6c0 481 Pfam PF05762 VWA domain containing CoxE-like protein 317 448 2.7E-9 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like VAB027_415 5e4db5beb6ae8d6d9df615d66db6a6c0 481 Gene3D G3DSA:3.40.50.410 322 465 5.4E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_415 5e4db5beb6ae8d6d9df615d66db6a6c0 481 SMART SM00327 320 479 0.001 T 14-10-2018 IPR002035 von Willebrand factor, type A VAB027_3486 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Gene3D G3DSA:1.10.20.140 115 186 2.6E-107 T 14-10-2018 VAB027_3486 7bfbc39566f52e3df4e34a3a88bcc2b9 315 SUPERFAMILY SSF52540 10 153 1.19E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3486 7bfbc39566f52e3df4e34a3a88bcc2b9 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 4.1E-117 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VAB027_3486 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.414 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VAB027_3486 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Gene3D G3DSA:3.40.50.300 12 292 2.6E-107 T 14-10-2018 VAB027_3486 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Pfam PF01715 IPP transferase 42 287 2.3E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VAB027_1252 a206a7468c15d322dfe2e7da172e7819 184 Gene3D G3DSA:2.40.160.20 21 184 2.3E-12 T 14-10-2018 VAB027_1252 a206a7468c15d322dfe2e7da172e7819 184 SUPERFAMILY SSF56925 23 184 9.68E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_1252 a206a7468c15d322dfe2e7da172e7819 184 Pfam PF13505 Outer membrane protein beta-barrel domain 7 184 3.0E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_720 025559e7b85ed1448d34e61221a54788 104 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 28 101 7.9E-8 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 VAB027_720 025559e7b85ed1448d34e61221a54788 104 Gene3D G3DSA:1.10.260.40 4 101 1.6E-17 T 14-10-2018 VAB027_720 025559e7b85ed1448d34e61221a54788 104 SUPERFAMILY SSF47413 43 90 1.53E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1455 218c508df1b9fd153ac3222ab9e27820 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 2.9E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAB027_1455 218c508df1b9fd153ac3222ab9e27820 244 Gene3D G3DSA:3.30.1330.30 1 94 1.7E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VAB027_1455 218c508df1b9fd153ac3222ab9e27820 244 Gene3D G3DSA:3.40.1280.10 96 244 2.1E-40 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_1455 218c508df1b9fd153ac3222ab9e27820 244 SUPERFAMILY SSF55315 5 92 8.0E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VAB027_1455 218c508df1b9fd153ac3222ab9e27820 244 SUPERFAMILY SSF75217 97 243 7.85E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_636 34969bc78e030900e3903814e80401bd 389 SUPERFAMILY SSF53383 6 381 7.43E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_636 34969bc78e030900e3903814e80401bd 389 Gene3D G3DSA:3.90.1150.10 15 378 4.0E-153 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_636 34969bc78e030900e3903814e80401bd 389 Gene3D G3DSA:3.40.640.10 55 286 4.0E-153 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_636 34969bc78e030900e3903814e80401bd 389 Pfam PF00155 Aminotransferase class I and II 41 375 5.7E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAB027_263 c32ce696b0d9f56b8bdc76426be5b05d 491 Pfam PF13401 AAA domain 29 152 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_263 c32ce696b0d9f56b8bdc76426be5b05d 491 Pfam PF05036 Sporulation related domain 404 477 2.5E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAB027_263 c32ce696b0d9f56b8bdc76426be5b05d 491 SUPERFAMILY SSF52540 27 192 1.18E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_263 c32ce696b0d9f56b8bdc76426be5b05d 491 Gene3D G3DSA:3.30.70.1070 384 488 3.8E-26 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_263 c32ce696b0d9f56b8bdc76426be5b05d 491 Gene3D G3DSA:3.40.50.300 9 163 5.6E-9 T 14-10-2018 VAB027_930 28d83d11f2886fc4647a983163554302 346 Gene3D G3DSA:3.30.360.10 128 329 6.6E-122 T 14-10-2018 VAB027_930 28d83d11f2886fc4647a983163554302 346 SUPERFAMILY SSF51735 3 203 1.24E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_930 28d83d11f2886fc4647a983163554302 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 1.7E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAB027_930 28d83d11f2886fc4647a983163554302 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 216 4.7E-16 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VAB027_930 28d83d11f2886fc4647a983163554302 346 Gene3D G3DSA:3.40.50.720 7 315 6.6E-122 T 14-10-2018 VAB027_3599 f0ba238379cc4e7f8d5f951edf9e3e4c 325 Gene3D G3DSA:3.30.360.10 129 320 1.6E-25 T 14-10-2018 VAB027_3599 f0ba238379cc4e7f8d5f951edf9e3e4c 325 SUPERFAMILY SSF51735 3 153 3.76E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3599 f0ba238379cc4e7f8d5f951edf9e3e4c 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 1.1E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAB027_3599 f0ba238379cc4e7f8d5f951edf9e3e4c 325 SUPERFAMILY SSF55347 127 296 2.13E-21 T 14-10-2018 VAB027_3599 f0ba238379cc4e7f8d5f951edf9e3e4c 325 Gene3D G3DSA:3.40.50.720 2 128 3.2E-23 T 14-10-2018 VAB027_1466 3f8cfe625902aca88667e307a315f62f 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 4.5E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_1466 3f8cfe625902aca88667e307a315f62f 82 SUPERFAMILY SSF143120 12 68 8.37E-9 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_1466 3f8cfe625902aca88667e307a315f62f 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 3.1E-6 T 14-10-2018 VAB027_1900 27c181f5c0d517a21ec996e0e88880c9 161 Pfam PF00583 Acetyltransferase (GNAT) family 40 137 1.4E-14 T 14-10-2018 IPR000182 GNAT domain VAB027_1900 27c181f5c0d517a21ec996e0e88880c9 161 Gene3D G3DSA:3.40.630.30 2 161 8.7E-28 T 14-10-2018 VAB027_1900 27c181f5c0d517a21ec996e0e88880c9 161 SUPERFAMILY SSF55729 1 160 2.03E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3161 825044e9b8a442d42cf580dca2cc5570 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 436 1.9E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain VAB027_3161 825044e9b8a442d42cf580dca2cc5570 494 Pfam PF02554 Carbon starvation protein CstA 5 144 6.2E-33 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VAB027_3161 825044e9b8a442d42cf580dca2cc5570 494 Pfam PF02554 Carbon starvation protein CstA 146 294 4.1E-20 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VAB027_3341 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Gene3D G3DSA:3.30.110.170 30 227 1.4E-47 T 14-10-2018 VAB027_3341 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Pfam PF04402 Protein of unknown function (DUF541) 28 227 8.0E-39 T 14-10-2018 IPR007497 Protein of unknown function DUF541 VAB027_3341 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Gene3D G3DSA:3.30.70.2970 40 147 1.4E-47 T 14-10-2018 VAB027_465 829ed6b605366faeef1578cc9f11cc22 206 Gene3D G3DSA:3.40.50.850 1 205 3.4E-71 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_465 829ed6b605366faeef1578cc9f11cc22 206 SUPERFAMILY SSF52499 2 205 1.06E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_465 829ed6b605366faeef1578cc9f11cc22 206 Pfam PF00857 Isochorismatase family 4 202 4.9E-30 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VAB027_632 ccbc00f02398ecb3452eddf78ee54ffe 314 Gene3D G3DSA:1.10.1580.10 177 268 2.3E-29 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VAB027_632 ccbc00f02398ecb3452eddf78ee54ffe 314 SUPERFAMILY SSF52540 12 188 4.74E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_632 ccbc00f02398ecb3452eddf78ee54ffe 314 Pfam PF01926 50S ribosome-binding GTPase 120 184 1.3E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VAB027_632 ccbc00f02398ecb3452eddf78ee54ffe 314 Gene3D G3DSA:3.40.50.300 6 174 5.2E-43 T 14-10-2018 VAB027_632 ccbc00f02398ecb3452eddf78ee54ffe 314 PIRSF PIRSF006230 2 280 5.6E-105 T 14-10-2018 IPR016478 GTPase, MTG1 VAB027_632 ccbc00f02398ecb3452eddf78ee54ffe 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 2.8E-108 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VAB027_828 530254ba7987ce8b4bc59c05fd381e57 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 149 160 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VAB027_828 530254ba7987ce8b4bc59c05fd381e57 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 149 408 1.5E-13 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VAB027_828 530254ba7987ce8b4bc59c05fd381e57 418 Gene3D G3DSA:3.40.50.1110 136 415 1.3E-38 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VAB027_828 530254ba7987ce8b4bc59c05fd381e57 418 SUPERFAMILY SSF52266 148 409 6.05E-22 T 14-10-2018 VAB027_2178 458096b3be2e8748b959b01fde76cfea 673 SMART SM00283 402 671 4.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2178 458096b3be2e8748b959b01fde76cfea 673 SUPERFAMILY SSF58104 364 671 1.03E-57 T 14-10-2018 VAB027_2178 458096b3be2e8748b959b01fde76cfea 673 Gene3D G3DSA:1.10.287.950 343 673 1.2E-57 T 14-10-2018 VAB027_2178 458096b3be2e8748b959b01fde76cfea 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 637 4.0E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1603 2103faff19e3cf3e4da416d7a9a707ca 195 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 187 7.1E-39 T 14-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 VAB027_568 a01f5f81200c38132389ba73d3b23147 317 Pfam PF02698 DUF218 domain 9 133 3.2E-14 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VAB027_581 b37d433dd9aecc02b657a2401f8eb742 163 SUPERFAMILY SSF55174 9 83 4.97E-19 T 14-10-2018 VAB027_581 b37d433dd9aecc02b657a2401f8eb742 163 Gene3D G3DSA:3.10.290.10 12 85 3.7E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAB027_581 b37d433dd9aecc02b657a2401f8eb742 163 Pfam PF13275 S4 domain 22 83 1.9E-22 T 14-10-2018 VAB027_3625 c668968fa0343a825e92d98b68793cbd 353 Gene3D G3DSA:3.40.50.2000 3 154 7.2E-27 T 14-10-2018 VAB027_3625 c668968fa0343a825e92d98b68793cbd 353 Gene3D G3DSA:3.40.50.2000 162 345 7.2E-42 T 14-10-2018 VAB027_3625 c668968fa0343a825e92d98b68793cbd 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 303 2.8E-53 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VAB027_3625 c668968fa0343a825e92d98b68793cbd 353 SUPERFAMILY SSF53756 8 341 1.49E-89 T 14-10-2018 VAB027_1639 7423d0a27d31b2265a581d2f5701711e 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1639 7423d0a27d31b2265a581d2f5701711e 373 Pfam PF01098 Cell cycle protein 23 367 7.6E-115 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1639 7423d0a27d31b2265a581d2f5701711e 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.403 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1639 7423d0a27d31b2265a581d2f5701711e 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.9E-138 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAB027_1036 4c8cc9a9a489782524edf000dca65013 119 Pfam PF00072 Response regulator receiver domain 4 115 3.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_1036 4c8cc9a9a489782524edf000dca65013 119 SUPERFAMILY SSF52172 1 119 1.27E-38 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_1036 4c8cc9a9a489782524edf000dca65013 119 Gene3D G3DSA:3.40.50.12740 1 119 1.5E-38 T 14-10-2018 VAB027_1036 4c8cc9a9a489782524edf000dca65013 119 SMART SM00448 2 115 4.2E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2207 77d03839164517ee38eb570608c1a9e2 404 Pfam PF12704 MacB-like periplasmic core domain 19 237 1.6E-24 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VAB027_2207 77d03839164517ee38eb570608c1a9e2 404 Pfam PF02687 FtsX-like permease family 305 395 3.9E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_1368 7763e4e60c6a5adfc481016fc2b1ecf2 417 SUPERFAMILY SSF109604 163 329 2.09E-27 T 14-10-2018 VAB027_1368 7763e4e60c6a5adfc481016fc2b1ecf2 417 TIGRFAM TIGR00277 HDIG: HDIG domain 166 259 2.6E-8 T 14-10-2018 IPR006675 HDIG domain VAB027_1368 7763e4e60c6a5adfc481016fc2b1ecf2 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 1.3E-32 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 VAB027_1368 7763e4e60c6a5adfc481016fc2b1ecf2 417 Pfam PF01966 HD domain 170 290 1.8E-16 T 14-10-2018 IPR006674 HD domain VAB027_1368 7763e4e60c6a5adfc481016fc2b1ecf2 417 SMART SM00471 164 300 1.9E-9 T 14-10-2018 IPR003607 HD/PDEase domain VAB027_1368 7763e4e60c6a5adfc481016fc2b1ecf2 417 Gene3D G3DSA:1.10.3210.10 5 319 5.4E-55 T 14-10-2018 VAB027_2191 4b2b159b672bb14fbe7d68245720d041 252 PIRSF PIRSF028069 1 252 1.8E-107 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VAB027_2191 4b2b159b672bb14fbe7d68245720d041 252 Pfam PF11932 Protein of unknown function (DUF3450) 5 245 1.0E-86 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VAB027_2450 84d694a83e4c050b73617d54fe889025 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 4.7E-140 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAB027_2450 84d694a83e4c050b73617d54fe889025 427 PIRSF PIRSF006066 1 425 9.1E-139 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAB027_2450 84d694a83e4c050b73617d54fe889025 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 7.7E-119 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAB027_563 e102777ae4c22816248fd378c6fa0611 390 Pfam PF00005 ABC transporter 37 179 3.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_563 e102777ae4c22816248fd378c6fa0611 390 SMART SM00382 46 229 4.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_563 e102777ae4c22816248fd378c6fa0611 390 SUPERFAMILY SSF52540 22 261 1.36E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_563 e102777ae4c22816248fd378c6fa0611 390 SUPERFAMILY SSF50331 255 370 8.5E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAB027_563 e102777ae4c22816248fd378c6fa0611 390 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 19 371 2.8E-155 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 VAB027_563 e102777ae4c22816248fd378c6fa0611 390 Gene3D G3DSA:2.40.50.140 300 334 3.6E-13 T 14-10-2018 VAB027_563 e102777ae4c22816248fd378c6fa0611 390 Gene3D G3DSA:3.40.50.300 21 239 7.1E-70 T 14-10-2018 VAB027_563 e102777ae4c22816248fd378c6fa0611 390 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_563 e102777ae4c22816248fd378c6fa0611 390 Gene3D G3DSA:2.40.50.940 240 299 3.6E-13 T 14-10-2018 VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 SUPERFAMILY SSF103647 29 80 1.01E-9 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 Pfam PF00691 OmpA family 92 187 3.4E-16 T 14-10-2018 IPR006665 OmpA-like domain VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 123 138 8.1E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 93 115 8.1E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 138 154 8.1E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 Gene3D G3DSA:3.30.1330.60 70 192 6.9E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2270 7992d755b6b56930f6c317eb7aa067d8 212 SUPERFAMILY SSF103088 63 192 3.92E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.6E-86 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.0E-38 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.582 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 SMART SM00967 5 81 8.6E-21 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 SUPERFAMILY SSF75217 69 244 6.15E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 SUPERFAMILY SSF55315 3 77 1.41E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 80 5.7E-20 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 Gene3D G3DSA:3.30.1330.30 1 77 7.8E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VAB027_1271 af187314b4b77c0f175c17725d1fc685 247 Gene3D G3DSA:3.40.1280.10 78 244 5.0E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_1982 a6ccb0ad7e88fad2f7fb9611fa28a00c 457 PIRSF PIRSF019381 1 457 4.3E-196 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VAB027_1982 a6ccb0ad7e88fad2f7fb9611fa28a00c 457 Pfam PF04317 YcjX-like family, DUF463 20 456 2.5E-184 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VAB027_259 e37d4b71bf5ad5fbcccbc825abd5f264 172 Pfam PF04351 Pilus assembly protein, PilP 25 171 1.4E-43 T 14-10-2018 IPR007446 Pilus assembly protein PilP VAB027_259 e37d4b71bf5ad5fbcccbc825abd5f264 172 Gene3D G3DSA:2.30.30.830 79 172 9.0E-24 T 14-10-2018 VAB027_259 e37d4b71bf5ad5fbcccbc825abd5f264 172 PIRSF PIRSF016481 1 172 9.0E-74 T 14-10-2018 IPR007446 Pilus assembly protein PilP VAB027_2700 0214e551389172331c74069d94a2c567 377 Pfam PF01339 CheB methylesterase 192 369 1.2E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_2700 0214e551389172331c74069d94a2c567 377 Gene3D G3DSA:3.40.50.2300 2 129 1.4E-31 T 14-10-2018 VAB027_2700 0214e551389172331c74069d94a2c567 377 SMART SM00448 3 126 2.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2700 0214e551389172331c74069d94a2c567 377 Gene3D G3DSA:3.40.50.180 184 373 1.6E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VAB027_2700 0214e551389172331c74069d94a2c567 377 SUPERFAMILY SSF52172 2 109 1.18E-26 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2700 0214e551389172331c74069d94a2c567 377 SUPERFAMILY SSF52738 186 371 1.44E-63 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VAB027_2700 0214e551389172331c74069d94a2c567 377 Pfam PF00072 Response regulator receiver domain 5 109 3.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2700 0214e551389172331c74069d94a2c567 377 PIRSF PIRSF000876 1 375 1.4E-127 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_2700 0214e551389172331c74069d94a2c567 377 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 375 39.0 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 SMART SM00382 122 247 0.0068 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 SUPERFAMILY SSF52540 5 335 2.85E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 Pfam PF00437 Type II/IV secretion system protein 12 270 1.6E-46 T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 8.1E-151 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 Gene3D G3DSA:3.30.450.90 1 100 2.2E-36 T 14-10-2018 VAB027_3361 f9f5263f44f0e28ac85c613905463a01 345 Gene3D G3DSA:3.40.50.300 102 343 3.1E-101 T 14-10-2018 VAB027_109 504909ce0fe11d45495fac95e456a56e 232 Gene3D G3DSA:3.30.450.40 42 218 1.1E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_109 504909ce0fe11d45495fac95e456a56e 232 Pfam PF04340 Protein of unknown function, DUF484 5 221 3.9E-86 T 14-10-2018 IPR007435 Protein of unknown function DUF484 VAB027_2751 c61b7109c000dd97629c51da1a27bd2a 88 SUPERFAMILY SSF160443 8 83 6.8E-13 T 14-10-2018 IPR036063 Smr domain superfamily VAB027_2751 c61b7109c000dd97629c51da1a27bd2a 88 SMART SM00463 6 84 8.9E-16 T 14-10-2018 IPR002625 Smr domain VAB027_2751 c61b7109c000dd97629c51da1a27bd2a 88 Gene3D G3DSA:3.30.1370.110 7 84 1.4E-22 T 14-10-2018 VAB027_2751 c61b7109c000dd97629c51da1a27bd2a 88 Pfam PF01713 Smr domain 9 83 1.1E-19 T 14-10-2018 IPR002625 Smr domain VAB027_3436 6ee1ede048c40bd384f4c2d2a0322fc7 290 Gene3D G3DSA:3.90.550.10 1 278 1.2E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3436 6ee1ede048c40bd384f4c2d2a0322fc7 290 SUPERFAMILY SSF53448 2 273 1.86E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3436 6ee1ede048c40bd384f4c2d2a0322fc7 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 6.3E-126 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VAB027_3436 6ee1ede048c40bd384f4c2d2a0322fc7 290 Pfam PF00483 Nucleotidyl transferase 9 266 2.2E-31 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAB027_2010 0e3efbc3da9a4dfbbb8f2945f840604f 165 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 21 156 2.2E-15 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 VAB027_2978 4e38b09b87cdfca40b3e7e9f37902a29 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-119 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAB027_2978 4e38b09b87cdfca40b3e7e9f37902a29 241 Pfam PF01048 Phosphorylase superfamily 15 222 1.5E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAB027_2978 4e38b09b87cdfca40b3e7e9f37902a29 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.848 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAB027_2978 4e38b09b87cdfca40b3e7e9f37902a29 241 SUPERFAMILY SSF53167 3 235 1.7E-94 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAB027_2978 4e38b09b87cdfca40b3e7e9f37902a29 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAB027_2978 4e38b09b87cdfca40b3e7e9f37902a29 241 Gene3D G3DSA:3.40.50.1580 1 239 5.5E-79 T 14-10-2018 VAB027_323 d3906d6ffa08dd40861b5c62e0a68396 217 SUPERFAMILY SSF56925 23 217 7.06E-32 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_323 d3906d6ffa08dd40861b5c62e0a68396 217 Gene3D G3DSA:2.40.160.20 22 217 5.0E-79 T 14-10-2018 VAB027_323 d3906d6ffa08dd40861b5c62e0a68396 217 Pfam PF03922 OmpW family 23 217 2.5E-76 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 VAB027_1596 5295d077c0810281e0768260b95285a8 114 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 101 7.0E-16 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative VAB027_44 503cf147efd410ee495a650d438d83a5 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 1.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_44 503cf147efd410ee495a650d438d83a5 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 6.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_44 503cf147efd410ee495a650d438d83a5 183 Gene3D G3DSA:2.160.10.10 1 183 1.9E-54 T 14-10-2018 VAB027_44 503cf147efd410ee495a650d438d83a5 183 SUPERFAMILY SSF51161 4 175 8.04E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 SMART SM00710 116 147 3700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 SMART SM00710 321 342 400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 SMART SM00710 289 310 380.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 SMART SM00710 234 256 5200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 SMART SM00710 257 279 1800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 Pfam PF12708 Pectate lyase superfamily protein 37 248 1.9E-8 T 14-10-2018 IPR024535 Pectate lyase superfamily protein VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 Gene3D G3DSA:2.160.20.10 36 407 1.3E-32 T 14-10-2018 IPR012334 Pectin lyase fold VAB027_1621 71e0ae643dc1e090717dde9d7023b3cb 408 SUPERFAMILY SSF51126 15 401 2.98E-40 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor VAB027_530 696c91955aca30963e1b0be61c856b1f 313 Pfam PF03466 LysR substrate binding domain 88 293 3.6E-44 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_530 696c91955aca30963e1b0be61c856b1f 313 SUPERFAMILY SSF46785 4 112 8.94E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_530 696c91955aca30963e1b0be61c856b1f 313 Gene3D G3DSA:1.10.10.10 1 90 2.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_530 696c91955aca30963e1b0be61c856b1f 313 Gene3D G3DSA:3.40.190.290 91 293 1.8E-58 T 14-10-2018 VAB027_530 696c91955aca30963e1b0be61c856b1f 313 SUPERFAMILY SSF53850 89 293 1.76E-44 T 14-10-2018 VAB027_530 696c91955aca30963e1b0be61c856b1f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_530 696c91955aca30963e1b0be61c856b1f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_530 696c91955aca30963e1b0be61c856b1f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_530 696c91955aca30963e1b0be61c856b1f 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2466 9cc678c10682a2c191be06f5d9d18e60 129 Pfam PF04134 Protein of unknown function, DUF393 8 116 1.5E-22 T 14-10-2018 IPR007263 Protein of unknown function DUF393 VAB027_377 9b463380652d55190755a8be9bbfec95 117 Pfam PF11225 Protein of unknown function (DUF3024) 57 116 1.4E-18 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 PRINTS PR01607 Apyrase family signature 249 272 9.7E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 PRINTS PR01607 Apyrase family signature 28 46 9.7E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 PRINTS PR01607 Apyrase family signature 289 309 9.7E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 PRINTS PR01607 Apyrase family signature 434 457 9.7E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 PRINTS PR01607 Apyrase family signature 221 238 9.7E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 PRINTS PR01607 Apyrase family signature 536 555 9.7E-31 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 Gene3D G3DSA:3.90.780.10 410 592 8.6E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 SUPERFAMILY SSF56300 24 360 3.8E-87 T 14-10-2018 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 4.9E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 554 8.3E-20 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 SUPERFAMILY SSF55816 361 601 1.83E-37 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAB027_1307 75215d3fdc7c580c4505b3bc31fadb14 653 Gene3D G3DSA:3.60.21.10 23 360 5.1E-138 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VAB027_3656 28d9cb68c283baef0e57f48d0b2ee897 361 SUPERFAMILY SSF55874 176 356 4.82E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_2446 491f5d21cc6ac46e6eb998f057d4b4f9 355 SUPERFAMILY SSF117281 6 143 7.32E-17 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VAB027_2446 491f5d21cc6ac46e6eb998f057d4b4f9 355 Pfam PF07646 Kelch motif 61 108 2.5E-6 T 14-10-2018 IPR011498 Kelch repeat type 2 GO:0005515 VAB027_2446 491f5d21cc6ac46e6eb998f057d4b4f9 355 Pfam PF07646 Kelch motif 257 313 3.3E-9 T 14-10-2018 IPR011498 Kelch repeat type 2 GO:0005515 VAB027_2446 491f5d21cc6ac46e6eb998f057d4b4f9 355 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 8 354 8.8E-145 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like VAB027_2446 491f5d21cc6ac46e6eb998f057d4b4f9 355 SUPERFAMILY SSF117281 171 346 9.15E-10 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VAB027_2446 491f5d21cc6ac46e6eb998f057d4b4f9 355 Gene3D G3DSA:2.120.10.80 3 155 2.8E-13 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VAB027_2662 4cf50f3009f1b510ab361c71f281eb03 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.068 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2662 4cf50f3009f1b510ab361c71f281eb03 56 SUPERFAMILY SSF57829 2 55 3.97E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VAB027_2662 4cf50f3009f1b510ab361c71f281eb03 56 Pfam PF01783 Ribosomal L32p protein family 2 56 5.2E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_2662 4cf50f3009f1b510ab361c71f281eb03 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3536 7602618048131931ea9af145750abd57 236 SUPERFAMILY SSF63380 2 100 1.78E-16 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAB027_3536 7602618048131931ea9af145750abd57 236 Pfam PF00175 Oxidoreductase NAD-binding domain 111 214 5.0E-23 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAB027_3536 7602618048131931ea9af145750abd57 236 Pfam PF00970 Oxidoreductase FAD-binding domain 15 99 1.9E-4 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAB027_3536 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 135 144 1.4E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_3536 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.4E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_3536 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.4E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_3536 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 110 129 1.4E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_3536 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.4E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAB027_3536 7602618048131931ea9af145750abd57 236 Gene3D G3DSA:3.40.50.80 103 236 2.4E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_3536 7602618048131931ea9af145750abd57 236 SUPERFAMILY SSF52343 103 234 8.38E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAB027_3536 7602618048131931ea9af145750abd57 236 Gene3D G3DSA:2.40.30.10 1 102 1.3E-20 T 14-10-2018 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 Pfam PF01047 MarR family 30 87 5.3E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 SMART SM00347 22 123 1.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 Gene3D G3DSA:1.10.10.10 2 135 8.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAB027_3197 bce63f335d98b30c9dc574217d27c238 135 SUPERFAMILY SSF46785 11 133 3.6E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1432 45ae871b3df1c4eecef7e14971e21ca0 319 Pfam PF01497 Periplasmic binding protein 49 287 4.0E-21 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VAB027_1432 45ae871b3df1c4eecef7e14971e21ca0 319 Gene3D G3DSA:3.40.50.1980 139 319 3.2E-72 T 14-10-2018 VAB027_1432 45ae871b3df1c4eecef7e14971e21ca0 319 SUPERFAMILY SSF53807 27 291 5.89E-38 T 14-10-2018 VAB027_1432 45ae871b3df1c4eecef7e14971e21ca0 319 Gene3D G3DSA:3.40.50.1980 23 138 4.7E-27 T 14-10-2018 VAB027_76 4cbaeb51e7b1070227f56fef3687ffe3 544 SUPERFAMILY SSF56112 94 436 1.19E-47 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_76 4cbaeb51e7b1070227f56fef3687ffe3 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.6E-178 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VAB027_76 4cbaeb51e7b1070227f56fef3687ffe3 544 Pfam PF03109 ABC1 family 111 230 1.9E-37 T 14-10-2018 IPR004147 UbiB domain VAB027_76 4cbaeb51e7b1070227f56fef3687ffe3 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.689 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 Gene3D G3DSA:3.40.1350.30 56 211 2.1E-70 T 14-10-2018 VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 Gene3D G3DSA:3.40.50.150 14 361 2.1E-70 T 14-10-2018 VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 364 78.266 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 SUPERFAMILY SSF53335 3 363 6.05E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 362 1.2E-13 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VAB027_1193 7d1ddb2e240495a7744d38d18711cd4a 368 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 361 1.3E-200 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 Gene3D G3DSA:2.40.50.1020 132 236 5.3E-12 T 14-10-2018 VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 SUPERFAMILY SSF52172 1 123 4.41E-32 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 Pfam PF00072 Response regulator receiver domain 5 112 4.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 Pfam PF04397 LytTr DNA-binding domain 142 234 1.4E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 Gene3D G3DSA:3.40.50.2300 1 125 1.5E-32 T 14-10-2018 VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 SMART SM00448 2 112 5.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_3155 16de7c59d2e951b28e210b9768af1ee6 237 SMART SM00850 141 235 1.1E-29 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 SMART SM00382 102 395 5.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Gene3D G3DSA:3.40.50.300 38 262 1.1E-77 T 14-10-2018 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Pfam PF11898 Domain of unknown function (DUF3418) 723 1307 1.1E-231 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Pfam PF00270 DEAD/DEAH box helicase 98 243 3.2E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 SUPERFAMILY SSF52540 82 616 2.52E-114 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 24 1307 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 SMART SM00487 82 269 1.1E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 SMART SM00847 475 570 2.3E-38 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 SMART SM00490 315 415 3.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Pfam PF04408 Helicase associated domain (HA2) 477 569 1.4E-18 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 633 709 3.5E-23 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Gene3D G3DSA:3.40.50.300 263 432 1.4E-55 T 14-10-2018 VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Pfam PF00271 Helicase conserved C-terminal domain 300 414 3.3E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VAB027_2059 67c51e5ff1e8fc039e2ca58ee4b7db5b 1309 Gene3D G3DSA:1.20.120.1080 459 567 2.0E-19 T 14-10-2018 VAB027_467 8c0ae003764f12153a2aaf2039c0e3b2 330 SUPERFAMILY SSF53822 28 292 3.43E-33 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_467 8c0ae003764f12153a2aaf2039c0e3b2 330 Gene3D G3DSA:3.40.50.2300 136 322 2.1E-112 T 14-10-2018 VAB027_467 8c0ae003764f12153a2aaf2039c0e3b2 330 Gene3D G3DSA:3.40.50.2300 29 298 2.1E-112 T 14-10-2018 VAB027_467 8c0ae003764f12153a2aaf2039c0e3b2 330 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 28 326 4.9E-147 T 14-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VAB027_467 8c0ae003764f12153a2aaf2039c0e3b2 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 27 283 1.7E-31 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAB027_201 75357120e3981f368b465e0091e7e62f 158 Gene3D G3DSA:3.40.1280.10 1 158 1.4E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_201 75357120e3981f368b465e0091e7e62f 158 PIRSF PIRSF029256 1 158 1.1E-65 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VAB027_201 75357120e3981f368b465e0091e7e62f 158 SUPERFAMILY SSF75217 2 156 7.85E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_201 75357120e3981f368b465e0091e7e62f 158 Pfam PF00588 SpoU rRNA Methylase family 3 145 1.6E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAB027_201 75357120e3981f368b465e0091e7e62f 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 32.906 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VAB027_2232 f11a327891058753bc904d32e5fed4f4 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.6E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_2232 f11a327891058753bc904d32e5fed4f4 131 SUPERFAMILY SSF54593 3 131 9.67E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_2232 f11a327891058753bc904d32e5fed4f4 131 Gene3D G3DSA:3.10.180.10 1 129 1.9E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_3419 ec0113572210449c9bfd2995e2216370 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 1.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3419 ec0113572210449c9bfd2995e2216370 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3419 ec0113572210449c9bfd2995e2216370 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 8.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1521 06823b5ec416ef485ae9db85ef7c15d2 177 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 1.3E-17 T 14-10-2018 IPR000182 GNAT domain VAB027_1521 06823b5ec416ef485ae9db85ef7c15d2 177 SUPERFAMILY SSF55729 2 141 1.24E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1521 06823b5ec416ef485ae9db85ef7c15d2 177 Gene3D G3DSA:3.40.630.30 1 150 1.4E-21 T 14-10-2018 VAB027_2964 db2d81483a41a22c2a149f50eebac364 483 Gene3D G3DSA:3.30.1490.20 293 359 1.6E-5 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAB027_2964 db2d81483a41a22c2a149f50eebac364 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 1.1E-11 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VAB027_2964 db2d81483a41a22c2a149f50eebac364 483 SUPERFAMILY SSF56059 268 476 1.51E-39 T 14-10-2018 VAB027_2964 db2d81483a41a22c2a149f50eebac364 483 Gene3D G3DSA:3.40.50.20 206 291 1.3E-6 T 14-10-2018 VAB027_2964 db2d81483a41a22c2a149f50eebac364 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 6.9E-42 T 14-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain VAB027_2964 db2d81483a41a22c2a149f50eebac364 483 Gene3D G3DSA:3.30.470.20 361 475 1.7E-19 T 14-10-2018 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3329 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_1670 57ad8720e0a1330ac4d92099749d1405 132 Pfam PF17323 Trans-membrane regulatory protein ToxS 1 129 1.3E-58 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VAB027_1670 57ad8720e0a1330ac4d92099749d1405 132 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 131 3.0E-71 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VAB027_2485 cfe21e82a7a460281757c440fe798367 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.2E-107 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAB027_2485 cfe21e82a7a460281757c440fe798367 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.9E-172 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAB027_2485 cfe21e82a7a460281757c440fe798367 378 PIRSF PIRSF000267 2 377 1.3E-123 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAB027_3225 e463ad05daf2e5f67ac91e256e9e5cbc 361 Pfam PF01594 AI-2E family transporter 14 347 1.4E-56 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VAB027_2600 3ce6cce26e50644b33d223ec7f7b707e 162 Gene3D G3DSA:2.40.128.640 54 162 2.7E-41 T 14-10-2018 VAB027_2600 3ce6cce26e50644b33d223ec7f7b707e 162 Pfam PF04170 NlpE N-terminal domain 67 152 1.5E-30 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE VAB027_2099 e7cdd8be317042eccf9fc7eda04b1f44 256 Gene3D G3DSA:1.10.3720.10 4 256 1.3E-48 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2099 e7cdd8be317042eccf9fc7eda04b1f44 256 SUPERFAMILY SSF161098 5 254 5.98E-55 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2099 e7cdd8be317042eccf9fc7eda04b1f44 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1941 5ede7d829a7964df361aacf059bf4760 461 PIRSF PIRSF028099 3 461 2.5E-185 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VAB027_1941 5ede7d829a7964df361aacf059bf4760 461 Gene3D G3DSA:1.10.760.10 316 461 7.6E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_1941 5ede7d829a7964df361aacf059bf4760 461 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 21 461 4.0E-144 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VAB027_1941 5ede7d829a7964df361aacf059bf4760 461 SUPERFAMILY SSF46626 319 461 1.27E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2065 9aa4d523b4d048aa52ded609fedf1caa 316 Pfam PF03466 LysR substrate binding domain 100 305 9.6E-40 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_2065 9aa4d523b4d048aa52ded609fedf1caa 316 SUPERFAMILY SSF53850 100 308 5.61E-38 T 14-10-2018 VAB027_2065 9aa4d523b4d048aa52ded609fedf1caa 316 SUPERFAMILY SSF46785 9 119 3.15E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_2065 9aa4d523b4d048aa52ded609fedf1caa 316 Gene3D G3DSA:1.10.10.10 12 99 2.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2065 9aa4d523b4d048aa52ded609fedf1caa 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 5.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_2065 9aa4d523b4d048aa52ded609fedf1caa 316 Gene3D G3DSA:3.40.190.290 102 305 4.7E-53 T 14-10-2018 VAB027_2484 5e7dd670e82ead93f0c01a122c8ecdb5 35 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.3E-17 T 14-10-2018 IPR012994 Membrane bound YbgT-like VAB027_2484 5e7dd670e82ead93f0c01a122c8ecdb5 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VAB027_3477 40b2108b04de13c2fcf581678ddefd53 238 Pfam PF08348 YheO-like PAS domain 29 137 1.4E-35 T 14-10-2018 IPR013559 YheO-like VAB027_3477 40b2108b04de13c2fcf581678ddefd53 238 Pfam PF13309 HTH domain 172 229 1.6E-17 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VAB027_3477 40b2108b04de13c2fcf581678ddefd53 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 28 141 9.0E-62 T 14-10-2018 IPR013559 YheO-like VAB027_2946 32172f947448968e31e5008a90a75f0a 403 Gene3D G3DSA:3.90.1150.10 7 396 1.7E-164 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_2946 32172f947448968e31e5008a90a75f0a 403 SUPERFAMILY SSF53383 3 400 7.13E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_2946 32172f947448968e31e5008a90a75f0a 403 Pfam PF00266 Aminotransferase class-V 24 392 1.9E-154 T 14-10-2018 IPR000192 Aminotransferase class V domain VAB027_2946 32172f947448968e31e5008a90a75f0a 403 Gene3D G3DSA:3.40.640.10 35 295 1.7E-164 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2946 32172f947448968e31e5008a90a75f0a 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 2.6E-168 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAB027_2946 32172f947448968e31e5008a90a75f0a 403 PIRSF PIRSF005572 21 403 1.9E-55 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAB027_2946 32172f947448968e31e5008a90a75f0a 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 1.4E-156 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAB027_3356 478b09f4d463d8560d65523662fda6ff 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.8E-51 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VAB027_3356 478b09f4d463d8560d65523662fda6ff 187 Gene3D G3DSA:3.40.1740.10 1 187 1.6E-70 T 14-10-2018 VAB027_3356 478b09f4d463d8560d65523662fda6ff 187 SUPERFAMILY SSF143456 1 187 1.57E-67 T 14-10-2018 VAB027_3356 478b09f4d463d8560d65523662fda6ff 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.264 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VAB027_2340 654120001d8db4bc954070d940d43a3c 60 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 1.0E-30 T 14-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VAB027_2340 654120001d8db4bc954070d940d43a3c 60 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-26 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VAB027_2020 0f7fc8def38b8187095d629a5bf0a75e 465 Gene3D G3DSA:3.90.79.10 4 102 7.0E-13 T 14-10-2018 VAB027_2020 0f7fc8def38b8187095d629a5bf0a75e 465 Pfam PF00293 NUDIX domain 19 99 7.1E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_2020 0f7fc8def38b8187095d629a5bf0a75e 465 SUPERFAMILY SSF55811 19 158 1.49E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_3608 d99e800dc1d4fdc9fef640177cc5d0a4 103 Pfam PF13737 Transposase DDE domain 19 94 3.8E-27 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_857 2363c9f168737852ac467073785e550c 530 SMART SM00065 21 169 1.8E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_857 2363c9f168737852ac467073785e550c 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAB027_857 2363c9f168737852ac467073785e550c 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAB027_857 2363c9f168737852ac467073785e550c 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAB027_857 2363c9f168737852ac467073785e550c 530 SUPERFAMILY SSF52540 193 426 1.11E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_857 2363c9f168737852ac467073785e550c 530 Pfam PF00158 Sigma-54 interaction domain 194 360 4.9E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAB027_857 2363c9f168737852ac467073785e550c 530 Gene3D G3DSA:1.10.10.60 469 521 6.6E-10 T 14-10-2018 VAB027_857 2363c9f168737852ac467073785e550c 530 SUPERFAMILY SSF55781 3 159 1.07E-15 T 14-10-2018 VAB027_857 2363c9f168737852ac467073785e550c 530 Gene3D G3DSA:3.40.50.300 181 364 2.2E-63 T 14-10-2018 VAB027_857 2363c9f168737852ac467073785e550c 530 Gene3D G3DSA:1.10.8.60 365 429 5.4E-19 T 14-10-2018 VAB027_857 2363c9f168737852ac467073785e550c 530 Pfam PF01590 GAF domain 23 156 4.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 VAB027_857 2363c9f168737852ac467073785e550c 530 SMART SM00382 214 357 6.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_857 2363c9f168737852ac467073785e550c 530 Gene3D G3DSA:3.30.450.40 2 175 2.1E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily VAB027_857 2363c9f168737852ac467073785e550c 530 SUPERFAMILY SSF46689 466 518 7.62E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PIRSF PIRSF002869 1 518 1.6E-150 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 366 385 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 54 70 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 166 187 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 35 54 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 142 166 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 268 294 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 418 435 4.1E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 3.1E-137 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 Pfam PF03023 MviN-like protein 30 478 1.0E-143 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3167 a0c1335a81eeb8c175ebf6750c122c7c 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.762 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAB027_3659 cdb69c2e27df156e6d409567ec98695d 122 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 4 118 2.8E-12 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase VAB027_3054 48e3263f8f898afa4dc7c0e0b9118929 246 Gene3D G3DSA:2.60.440.10 6 245 1.9E-83 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal VAB027_3054 48e3263f8f898afa4dc7c0e0b9118929 246 SUPERFAMILY SSF160950 1 245 1.57E-92 T 14-10-2018 IPR036268 ZapD domain superfamily VAB027_3054 48e3263f8f898afa4dc7c0e0b9118929 246 Pfam PF07072 Cell division protein 18 224 6.1E-76 T 14-10-2018 IPR009777 Cell division protein ZapD VAB027_3054 48e3263f8f898afa4dc7c0e0b9118929 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.264 T 14-10-2018 IPR009777 Cell division protein ZapD VAB027_3054 48e3263f8f898afa4dc7c0e0b9118929 246 Gene3D G3DSA:1.10.3900.10 12 178 1.9E-83 T 14-10-2018 VAB027_969 3afdbc6509f4e3f204a014285eae24dc 317 PIRSF PIRSF037004 1 317 5.8E-141 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VAB027_969 3afdbc6509f4e3f204a014285eae24dc 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 7.0E-45 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 VAB027_969 3afdbc6509f4e3f204a014285eae24dc 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 1.3E-39 T 14-10-2018 IPR007553 Domain of unknown function DUF523 VAB027_2674 1aec2e26cbe9ea79ac00e198f640cafd 401 SMART SM00073 292 387 1.2E-4 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_2674 1aec2e26cbe9ea79ac00e198f640cafd 401 SUPERFAMILY SSF47226 284 380 4.45E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2674 1aec2e26cbe9ea79ac00e198f640cafd 401 Gene3D G3DSA:1.20.120.160 280 391 6.9E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2674 1aec2e26cbe9ea79ac00e198f640cafd 401 Pfam PF01627 Hpt domain 301 376 6.4E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_359 862fb765e9620425527bbfc7f0686430 109 Gene3D G3DSA:3.30.1360.20 15 109 9.8E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAB027_359 862fb765e9620425527bbfc7f0686430 109 SUPERFAMILY SSF55248 16 108 6.41E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAB027_359 862fb765e9620425527bbfc7f0686430 109 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 107 6.2E-32 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAB027_359 862fb765e9620425527bbfc7f0686430 109 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.592 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAB027_61 a94dc3c03be2a04f67fc6cf8bdbc1c4a 396 SUPERFAMILY SSF103473 8 382 3.53E-57 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_61 a94dc3c03be2a04f67fc6cf8bdbc1c4a 396 Gene3D G3DSA:1.20.1720.10 10 384 3.7E-89 T 14-10-2018 VAB027_61 a94dc3c03be2a04f67fc6cf8bdbc1c4a 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 374 2.1E-67 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VAB027_61 a94dc3c03be2a04f67fc6cf8bdbc1c4a 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VAB027_61 a94dc3c03be2a04f67fc6cf8bdbc1c4a 396 Pfam PF07690 Major Facilitator Superfamily 14 351 9.8E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_1875 2bf11e3c77273ba79a1996b5d6d06585 227 Gene3D G3DSA:3.40.1550.10 7 173 2.3E-19 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_1875 2bf11e3c77273ba79a1996b5d6d06585 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 6.8E-115 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 VAB027_1875 2bf11e3c77273ba79a1996b5d6d06585 227 SUPERFAMILY SSF103039 10 173 2.88E-24 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_124 cd7257ef11e033b49f8f93b65d7f4617 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_124 cd7257ef11e033b49f8f93b65d7f4617 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 1.7E-62 T 14-10-2018 VAB027_124 cd7257ef11e033b49f8f93b65d7f4617 199 Gene3D G3DSA:3.40.50.150 8 199 1.1E-64 T 14-10-2018 VAB027_124 cd7257ef11e033b49f8f93b65d7f4617 199 SUPERFAMILY SSF53335 18 195 3.81E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_124 cd7257ef11e033b49f8f93b65d7f4617 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 1.6E-56 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VAB027_124 cd7257ef11e033b49f8f93b65d7f4617 199 PIRSF PIRSF004553 18 198 3.6E-53 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VAB027_572 788862cc75eadaf4088d022ea2aef8c8 605 PIRSF PIRSF002741 15 596 6.9E-130 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAB027_572 788862cc75eadaf4088d022ea2aef8c8 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 508 2.2E-84 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VAB027_572 788862cc75eadaf4088d022ea2aef8c8 605 SUPERFAMILY SSF53850 52 593 2.53E-120 T 14-10-2018 VAB027_572 788862cc75eadaf4088d022ea2aef8c8 605 Gene3D G3DSA:3.10.105.10 313 571 7.5E-228 T 14-10-2018 VAB027_572 788862cc75eadaf4088d022ea2aef8c8 605 Gene3D G3DSA:3.40.190.10 33 591 7.5E-228 T 14-10-2018 VAB027_205 2655d5728e41a80be7f92b33cdd57546 167 Gene3D G3DSA:1.20.120.1490 38 157 1.5E-26 T 14-10-2018 VAB027_205 2655d5728e41a80be7f92b33cdd57546 167 PIRSF PIRSF034445 1 154 4.9E-18 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VAB027_205 2655d5728e41a80be7f92b33cdd57546 167 Pfam PF07813 LTXXQ motif family protein 40 145 7.6E-21 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 Gene3D G3DSA:1.10.260.40 1 64 3.6E-16 T 14-10-2018 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 SMART SM00354 6 76 3.8E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 SUPERFAMILY SSF53822 64 319 1.65E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.8E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 315 7.2E-34 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 Gene3D G3DSA:3.40.50.2300 164 292 7.1E-68 T 14-10-2018 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 SUPERFAMILY SSF47413 6 64 2.35E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_3557 592a45cb06048f2e5ae78da6fd0d7797 332 Gene3D G3DSA:3.40.50.2300 67 308 7.1E-68 T 14-10-2018 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 SUPERFAMILY SSF51735 1 145 4.29E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 58.123 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 Gene3D G3DSA:3.90.110.10 147 311 6.8E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 Gene3D G3DSA:3.40.50.720 1 146 2.8E-65 T 14-10-2018 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 9.1E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 4.4E-48 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 3.3E-129 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 SUPERFAMILY SSF56327 146 310 2.62E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VAB027_3399 b4f47575a24d74f24fc37734dbd5482a 311 PIRSF PIRSF000102 1 308 9.8E-61 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VAB027_2486 bd4f77893a103b603830ca90f8065a5f 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.5E-177 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAB027_2486 bd4f77893a103b603830ca90f8065a5f 528 PIRSF PIRSF006446 1 332 8.2E-119 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAB027_2486 bd4f77893a103b603830ca90f8065a5f 528 PIRSF PIRSF006446 347 528 5.1E-33 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAB027_901 4af85c7773d1e9d4a1525aebe1741545 292 Pfam PF13407 Periplasmic binding protein domain 27 278 8.0E-60 T 14-10-2018 IPR025997 Periplasmic binding protein VAB027_901 4af85c7773d1e9d4a1525aebe1741545 292 SUPERFAMILY SSF53822 4 291 8.73E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_901 4af85c7773d1e9d4a1525aebe1741545 292 Gene3D G3DSA:3.40.50.2300 125 259 7.1E-96 T 14-10-2018 VAB027_901 4af85c7773d1e9d4a1525aebe1741545 292 Gene3D G3DSA:3.40.50.2300 32 278 7.1E-96 T 14-10-2018 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.1E-96 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.1E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.1E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.1E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.1E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:3.40.50.150 7 239 1.9E-83 T 14-10-2018 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:1.10.1020.10 57 156 1.9E-83 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 SUPERFAMILY SSF53335 5 268 1.29E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 PIRSF PIRSF000398 1 275 1.5E-76 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VAB027_264 a1ca903f4e36631d531ac1a1d279ed53 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.7E-70 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 7 22 1.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 42 60 1.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 PRINTS PR00050 Cold shock protein signature 27 36 1.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 PIRSF PIRSF002599 1 69 2.8E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 SUPERFAMILY SSF50249 3 68 2.45E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 Gene3D G3DSA:2.40.50.140 5 68 6.3E-29 T 14-10-2018 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 2.5E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAB027_854 74e0597bce1c9ea10a289576a4c4dd81 69 SMART SM00357 6 69 3.8E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_360 ecfc726ba6f96be4339e0738c842720a 180 Gene3D G3DSA:3.40.630.30 21 178 1.3E-45 T 14-10-2018 VAB027_360 ecfc726ba6f96be4339e0738c842720a 180 Pfam PF00583 Acetyltransferase (GNAT) family 56 142 1.6E-12 T 14-10-2018 IPR000182 GNAT domain VAB027_360 ecfc726ba6f96be4339e0738c842720a 180 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 176 8.7E-58 T 14-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 VAB027_360 ecfc726ba6f96be4339e0738c842720a 180 SUPERFAMILY SSF55729 22 142 2.29E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_3055 95b4cc107c5e15c776690c29cc5cace3 65 SUPERFAMILY SSF57716 5 63 1.07E-21 T 14-10-2018 VAB027_3055 95b4cc107c5e15c776690c29cc5cace3 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 1.5E-24 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VAB027_3055 95b4cc107c5e15c776690c29cc5cace3 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.592 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VAB027_3055 95b4cc107c5e15c776690c29cc5cace3 65 Gene3D G3DSA:3.30.50.10 1 65 1.7E-24 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VAB027_2578 7126fcd806cbc0a4dd57104cd85987c0 310 Pfam PF01148 Cytidylyltransferase family 42 307 1.3E-68 T 14-10-2018 VAB027_2578 7126fcd806cbc0a4dd57104cd85987c0 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VAB027_2151 3c611bbadd41d28805fbfefdb1aaace4 158 SUPERFAMILY SSF54637 12 151 2.2E-14 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_2151 3c611bbadd41d28805fbfefdb1aaace4 158 Gene3D G3DSA:3.10.129.10 5 141 2.5E-22 T 14-10-2018 VAB027_2151 3c611bbadd41d28805fbfefdb1aaace4 158 Pfam PF14539 Domain of unknown function (DUF4442) 17 102 1.0E-7 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VAB027_3485 2aa8931a8d9ed84a652892bae41ba8e1 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VAB027_3485 2aa8931a8d9ed84a652892bae41ba8e1 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 14-10-2018 VAB027_3485 2aa8931a8d9ed84a652892bae41ba8e1 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VAB027_3485 2aa8931a8d9ed84a652892bae41ba8e1 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VAB027_3485 2aa8931a8d9ed84a652892bae41ba8e1 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 14-10-2018 IPR010920 LSM domain superfamily VAB027_2702 dc28bcd01387f449b16dc27c3db64845 239 SUPERFAMILY SSF75708 28 238 5.49E-66 T 14-10-2018 VAB027_2702 dc28bcd01387f449b16dc27c3db64845 239 Pfam PF04344 Chemotaxis phosphatase, CheZ 36 239 1.4E-76 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VAB027_2702 dc28bcd01387f449b16dc27c3db64845 239 PIRSF PIRSF002884 13 239 1.5E-93 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VAB027_2702 dc28bcd01387f449b16dc27c3db64845 239 Gene3D G3DSA:1.10.287.500 55 189 1.4E-46 T 14-10-2018 VAB027_1671 d2f48208494e67058a8a864a643658fe 282 SUPERFAMILY SSF46894 6 109 1.02E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_1671 d2f48208494e67058a8a864a643658fe 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 2.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_1671 d2f48208494e67058a8a864a643658fe 282 Gene3D G3DSA:1.10.10.10 5 107 9.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1671 d2f48208494e67058a8a864a643658fe 282 SMART SM00862 30 107 3.0E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2017 fb6fcef9a8a90b2512e9ca19b9a25d70 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 2 387 3.3E-221 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 VAB027_2017 fb6fcef9a8a90b2512e9ca19b9a25d70 396 Pfam PF04303 PrpF protein 3 385 1.4E-183 T 14-10-2018 IPR007400 PrpF protein VAB027_2017 fb6fcef9a8a90b2512e9ca19b9a25d70 396 Gene3D G3DSA:3.10.310.10 178 368 7.8E-147 T 14-10-2018 VAB027_2017 fb6fcef9a8a90b2512e9ca19b9a25d70 396 SUPERFAMILY SSF54506 2 179 6.51E-70 T 14-10-2018 VAB027_2017 fb6fcef9a8a90b2512e9ca19b9a25d70 396 Gene3D G3DSA:3.10.310.10 8 382 7.8E-147 T 14-10-2018 VAB027_2017 fb6fcef9a8a90b2512e9ca19b9a25d70 396 SUPERFAMILY SSF54506 182 387 1.02E-75 T 14-10-2018 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 SUPERFAMILY SSF53383 17 438 2.2E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_777 f28c7e35c953297e63164b0c767592ef 954 Gene3D G3DSA:3.90.1150.10 760 896 8.1E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.468 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 Pfam PF02347 Glycine cleavage system P-protein 458 736 2.4E-8 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 1.1E-174 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 SUPERFAMILY SSF53383 457 947 1.96E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_777 f28c7e35c953297e63164b0c767592ef 954 Gene3D G3DSA:3.40.640.10 522 747 3.4E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_777 f28c7e35c953297e63164b0c767592ef 954 Gene3D G3DSA:3.40.640.10 95 353 5.3E-103 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_2538 a96dedeb490f567a5f1b077e09d7e978 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.6E-75 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VAB027_2538 a96dedeb490f567a5f1b077e09d7e978 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 2.3E-55 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VAB027_2538 a96dedeb490f567a5f1b077e09d7e978 196 Gene3D G3DSA:3.40.50.10610 39 188 4.4E-44 T 14-10-2018 VAB027_3579 a392946588ec536744a7be3cbddc8c9b 256 Gene3D G3DSA:3.10.560.10 152 224 1.6E-20 T 14-10-2018 VAB027_3579 a392946588ec536744a7be3cbddc8c9b 256 Pfam PF06251 Capsule biosynthesis GfcC 27 255 7.7E-50 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VAB027_1304 22efd8c3434d3f3e5f390ab2d97d0964 149 Gene3D G3DSA:3.40.630.30 1 149 1.6E-46 T 14-10-2018 VAB027_1304 22efd8c3434d3f3e5f390ab2d97d0964 149 SUPERFAMILY SSF55729 1 148 6.62E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1304 22efd8c3434d3f3e5f390ab2d97d0964 149 Pfam PF13673 Acetyltransferase (GNAT) domain 45 148 2.0E-18 T 14-10-2018 IPR000182 GNAT domain VAB027_2995 4c0e653a6fa96ea1d0d73a648d2d10b8 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.5E-69 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VAB027_2995 4c0e653a6fa96ea1d0d73a648d2d10b8 161 SUPERFAMILY SSF89562 1 158 1.57E-49 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VAB027_2995 4c0e653a6fa96ea1d0d73a648d2d10b8 161 Pfam PF03737 Aldolase/RraA 5 152 1.8E-42 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VAB027_2995 4c0e653a6fa96ea1d0d73a648d2d10b8 161 Gene3D G3DSA:3.50.30.40 1 161 1.5E-68 T 14-10-2018 VAB027_1329 3556e220c301b5e59ee4091f4a902bff 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.2E-119 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VAB027_1329 3556e220c301b5e59ee4091f4a902bff 238 SMART SM00382 24 207 1.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_1329 3556e220c301b5e59ee4091f4a902bff 238 Pfam PF00005 ABC transporter 19 157 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_1329 3556e220c301b5e59ee4091f4a902bff 238 Gene3D G3DSA:3.40.50.300 2 238 4.7E-63 T 14-10-2018 VAB027_1329 3556e220c301b5e59ee4091f4a902bff 238 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_1329 3556e220c301b5e59ee4091f4a902bff 238 SUPERFAMILY SSF52540 1 231 5.2E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1127 ef62121111581531c393c476c9fb4d77 209 Pfam PF01810 LysE type translocator 16 205 4.4E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_1127 ef62121111581531c393c476c9fb4d77 209 PIRSF PIRSF006324 1 208 2.5E-53 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_3757 070ead9508ea29101c9402dad212e2d8 413 Gene3D G3DSA:1.10.340.50 184 299 6.8E-9 T 14-10-2018 VAB027_3757 070ead9508ea29101c9402dad212e2d8 413 Pfam PF03090 Replicase family 41 168 3.8E-49 T 14-10-2018 IPR004322 Plasmid replicase, bacterial VAB027_3757 070ead9508ea29101c9402dad212e2d8 413 Pfam PF08708 Primase C terminal 1 (PriCT-1) 184 259 1.2E-17 T 14-10-2018 IPR014820 Primase, C-terminal 1 VAB027_981 9791a55b291ad93fc0e5ac7d69db8315 150 Gene3D G3DSA:2.60.40.1890 28 144 4.3E-37 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VAB027_981 9791a55b291ad93fc0e5ac7d69db8315 150 Pfam PF04314 Copper chaperone PCu(A)C 25 131 3.3E-35 T 14-10-2018 IPR007410 Copper chaperone PCuAC VAB027_981 9791a55b291ad93fc0e5ac7d69db8315 150 SUPERFAMILY SSF110087 3 141 4.97E-46 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VAB027_383 8564507e71f2d7d5f50ec5cf15822d07 160 Pfam PF05981 CreA protein 25 147 4.8E-45 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VAB027_383 8564507e71f2d7d5f50ec5cf15822d07 160 PIRSF PIRSF003174 2 157 2.0E-50 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VAB027_123 0c50b7e7cf505d0ec69923a56d27805a 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 7.6E-18 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 VAB027_2479 a675cb20c45b517c3d1aea224f274eb6 358 Pfam PF06519 TolA C-terminal 256 355 3.3E-34 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VAB027_2479 a675cb20c45b517c3d1aea224f274eb6 358 SUPERFAMILY SSF74653 265 358 1.8E-14 T 14-10-2018 VAB027_2479 a675cb20c45b517c3d1aea224f274eb6 358 TIGRFAM TIGR02794 tolA_full: protein TolA 13 357 1.6E-92 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VAB027_2479 a675cb20c45b517c3d1aea224f274eb6 358 Gene3D G3DSA:3.30.1150.10 256 358 1.7E-27 T 14-10-2018 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 SUPERFAMILY SSF47323 661 857 1.81E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.405 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 1.6E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.7E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 8.5E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 14-10-2018 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.9E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Gene3D G3DSA:3.10.20.590 797 857 1.0E-22 T 14-10-2018 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 SUPERFAMILY SSF50677 226 415 1.47E-59 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 4.3E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 819 9.2E-15 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 SUPERFAMILY SSF52374 4 667 7.04E-146 T 14-10-2018 VAB027_1645 cfe207ac5bc8eed2785a89b72cf059da 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 14-10-2018 VAB027_1683 2e9be55536a553a8d592425c2468ee6e 1462 Gene3D G3DSA:1.20.58.2200 1400 1458 6.5E-14 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily VAB027_1683 2e9be55536a553a8d592425c2468ee6e 1462 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 67 139 3.6E-25 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal VAB027_1683 2e9be55536a553a8d592425c2468ee6e 1462 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1416 1458 5.0E-16 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal VAB027_2737 74a6c51d9ace5bed45b57d3821f2cbf0 146 Pfam PF03788 LrgA family 27 120 1.0E-28 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 SUPERFAMILY SSF52096 25 280 2.46E-86 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.622 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 Pfam PF01039 Carboxyl transferase domain 99 241 1.8E-15 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 Gene3D G3DSA:3.90.226.10 25 284 2.8E-84 T 14-10-2018 VAB027_1685 f4b71896bceffc85043597b7dbedcee7 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 6.1E-139 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAB027_121 b5e66884eb353eb317a1bb3bad483af7 122 Pfam PF13643 Domain of unknown function (DUF4145) 12 76 5.1E-5 T 14-10-2018 IPR025285 Domain of unknown function DUF4145 VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 SUPERFAMILY SSF160544 246 346 4.97E-21 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 Gene3D G3DSA:3.40.1690.10 208 349 6.4E-34 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 262 277 2.9E-25 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 2.9E-25 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 292 313 2.9E-25 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 199 217 2.9E-25 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 219 236 2.9E-25 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2415 107fa10cf6b3993955a406e2ee889ef6 350 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 336 7.4E-74 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_3151 6907eb3eb752d55b62d2be6008ba43bf 123 Pfam PF07238 PilZ domain 3 100 7.7E-14 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VAB027_3151 6907eb3eb752d55b62d2be6008ba43bf 123 SUPERFAMILY SSF141371 1 118 3.53E-33 T 14-10-2018 VAB027_3151 6907eb3eb752d55b62d2be6008ba43bf 123 Gene3D G3DSA:2.40.10.220 1 119 8.6E-31 T 14-10-2018 VAB027_3151 6907eb3eb752d55b62d2be6008ba43bf 123 PIRSF PIRSF028141 1 120 2.5E-38 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VAB027_450 849fe147af09eeca7c457d464192f569 440 SUPERFAMILY SSF53098 103 419 5.92E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_450 849fe147af09eeca7c457d464192f569 440 Pfam PF01609 Transposase DDE domain 129 350 8.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_450 849fe147af09eeca7c457d464192f569 440 Pfam PF13006 Insertion element 4 transposase N-terminal 17 107 1.3E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VAB027_1346 aa1d85e7d6aec293ba4933ba05be9949 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 3.9E-55 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VAB027_1346 aa1d85e7d6aec293ba4933ba05be9949 163 Pfam PF02470 MlaD protein 40 118 2.7E-20 T 14-10-2018 IPR003399 Mce/MlaD VAB027_2780 db6f7b002bbcf06fff369ca8e0893f4d 95 Gene3D G3DSA:1.10.10.10 2 95 4.8E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2780 db6f7b002bbcf06fff369ca8e0893f4d 95 PIRSF PIRSF037266 1 94 4.7E-42 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VAB027_2780 db6f7b002bbcf06fff369ca8e0893f4d 95 Pfam PF09904 Winged helix-turn helix 4 91 3.2E-39 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 Gene3D G3DSA:2.40.50.140 1 84 2.9E-39 T 14-10-2018 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 Pfam PF00366 Ribosomal protein S17 10 77 1.0E-34 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 SUPERFAMILY SSF50249 6 83 2.66E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.251 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 4.0E-39 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_1282 3bfa8cb8c2974760d807f060a4011116 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Pfam PF08238 Sel1 repeat 176 211 1.1E-4 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Pfam PF08238 Sel1 repeat 321 354 170.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Pfam PF08238 Sel1 repeat 212 247 0.004 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Pfam PF08238 Sel1 repeat 250 283 3.9E-5 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Pfam PF08238 Sel1 repeat 286 316 0.96 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Pfam PF08238 Sel1 repeat 144 175 0.13 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SUPERFAMILY SSF81901 146 379 2.46E-42 T 14-10-2018 VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Gene3D G3DSA:1.25.40.10 229 385 2.3E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SMART SM00671 212 247 0.0011 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SMART SM00671 319 354 130.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SMART SM00671 176 211 0.02 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SMART SM00671 144 175 0.18 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SMART SM00671 284 318 24.0 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 SMART SM00671 248 283 4.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat VAB027_2464 6bbb2e1e79f601a6cb7ba32ad4ad590d 387 Gene3D G3DSA:1.25.40.10 2 228 1.5E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 Gene3D G3DSA:3.20.20.140 1 255 2.8E-99 T 14-10-2018 VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 Pfam PF01026 TatD related DNase 3 253 8.5E-78 T 14-10-2018 IPR001130 TatD family GO:0016788 VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 SUPERFAMILY SSF51556 1 253 1.28E-87 T 14-10-2018 IPR032466 Metal-dependent hydrolase VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 9.0E-93 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VAB027_2651 7edddf89d8bb5b0f021e5707f4171b98 255 PIRSF PIRSF005902 1 255 9.6E-82 T 14-10-2018 IPR001130 TatD family GO:0016788 VAB027_1909 930848718fc8476e59b12403aa1d39c6 291 Pfam PF03547 Membrane transport protein 141 284 1.5E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VAB027_2250 f055fab560a8e971b0f0a1a121de0efa 258 SUPERFAMILY SSF53850 31 258 2.72E-33 T 14-10-2018 VAB027_2250 f055fab560a8e971b0f0a1a121de0efa 258 Gene3D G3DSA:3.40.190.10 36 242 3.8E-24 T 14-10-2018 VAB027_2250 f055fab560a8e971b0f0a1a121de0efa 258 Gene3D G3DSA:3.40.190.10 117 213 3.8E-24 T 14-10-2018 VAB027_2250 f055fab560a8e971b0f0a1a121de0efa 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 242 1.8E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_1833 bf1ca40228558c7f6b612a653798cdbc 306 SUPERFAMILY SSF109604 32 301 1.54E-39 T 14-10-2018 VAB027_1833 bf1ca40228558c7f6b612a653798cdbc 306 Gene3D G3DSA:1.10.3210.10 21 297 2.2E-36 T 14-10-2018 VAB027_1833 bf1ca40228558c7f6b612a653798cdbc 306 Pfam PF08668 HDOD domain 39 233 2.4E-36 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAB027_334 5f88b487167a5a2e1a95dc34511fbeac 419 Pfam PF12704 MacB-like periplasmic core domain 23 247 4.3E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VAB027_334 5f88b487167a5a2e1a95dc34511fbeac 419 Pfam PF02687 FtsX-like permease family 312 408 5.2E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Gene3D G3DSA:3.40.190.10 83 177 1.5E-5 T 14-10-2018 VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Gene3D G3DSA:1.10.10.10 1 82 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 SUPERFAMILY SSF53850 91 275 8.51E-16 T 14-10-2018 VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Pfam PF03466 LysR substrate binding domain 91 265 2.5E-10 T 14-10-2018 IPR005119 LysR, substrate-binding VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 SUPERFAMILY SSF46785 1 81 7.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1110 aa66837cf15b6aad0b6bc0c1d4f0eae8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAB027_1959 4a9be26d5e260587a6d414d2d5d14fb8 111 Gene3D G3DSA:1.20.58.280 1 101 3.6E-35 T 14-10-2018 VAB027_1959 4a9be26d5e260587a6d414d2d5d14fb8 111 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 9.9E-35 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VAB027_1959 4a9be26d5e260587a6d414d2d5d14fb8 111 SUPERFAMILY SSF46973 2 98 2.88E-34 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VAB027_1959 4a9be26d5e260587a6d414d2d5d14fb8 111 PIRSF PIRSF000699 1 105 4.6E-40 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VAB027_3001 0bb2f5cdbe14acd9f9e3d7537fe8c8c5 312 Gene3D G3DSA:3.80.30.20 42 272 6.9E-16 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_3001 0bb2f5cdbe14acd9f9e3d7537fe8c8c5 312 SUPERFAMILY SSF102114 13 268 5.23E-47 T 14-10-2018 VAB027_3001 0bb2f5cdbe14acd9f9e3d7537fe8c8c5 312 Pfam PF04055 Radical SAM superfamily 43 201 7.1E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_3001 0bb2f5cdbe14acd9f9e3d7537fe8c8c5 312 SMART SM00729 23 247 1.8E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_3001 0bb2f5cdbe14acd9f9e3d7537fe8c8c5 312 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 2.1E-144 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 VAB027_3001 0bb2f5cdbe14acd9f9e3d7537fe8c8c5 312 Pfam PF16199 Radical_SAM C-terminal domain 209 290 1.6E-19 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VAB027_341 ca20e1a4e3e24bad25216a858827e00d 414 Pfam PF13520 Amino acid permease 14 366 4.0E-28 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_341 ca20e1a4e3e24bad25216a858827e00d 414 PIRSF PIRSF006060 1 412 9.4E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_341 ca20e1a4e3e24bad25216a858827e00d 414 Gene3D G3DSA:1.20.1740.10 2 412 3.9E-57 T 14-10-2018 VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 SUPERFAMILY SSF52172 3 181 2.41E-36 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 Gene3D G3DSA:1.10.10.10 121 234 2.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 SMART SM00448 3 113 8.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-32 T 14-10-2018 VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 SMART SM00862 155 231 2.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 9.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2364 05cb025c42433a1bbc4ae25861469c7b 234 Pfam PF00072 Response regulator receiver domain 5 113 1.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2618 8e11d97ac1388cfb8f564f75839a67f5 615 Gene3D G3DSA:1.10.1370.10 47 247 9.2E-7 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VAB027_2618 8e11d97ac1388cfb8f564f75839a67f5 615 Pfam PF01432 Peptidase family M3 283 548 1.6E-16 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VAB027_2618 8e11d97ac1388cfb8f564f75839a67f5 615 SUPERFAMILY SSF55486 4 551 1.19E-72 T 14-10-2018 VAB027_2618 8e11d97ac1388cfb8f564f75839a67f5 615 Gene3D G3DSA:3.40.390.10 283 380 9.7E-20 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VAB027_2618 8e11d97ac1388cfb8f564f75839a67f5 615 Gene3D G3DSA:1.10.1370.10 381 541 9.7E-20 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 Gene3D G3DSA:3.40.50.2300 161 290 2.4E-89 T 14-10-2018 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 Gene3D G3DSA:3.40.50.2300 69 322 2.4E-89 T 14-10-2018 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 SUPERFAMILY SSF53822 60 331 2.55E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 SUPERFAMILY SSF47413 1 59 1.04E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.6E-44 T 14-10-2018 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 Gene3D G3DSA:1.10.260.40 3 59 2.0E-23 T 14-10-2018 VAB027_899 8c68e0ff24f39d3a44603632617c59f3 334 SMART SM00354 1 71 7.1E-36 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAB027_866 00268a9f64524628afa3d121ef704ea5 308 Pfam PF00092 von Willebrand factor type A domain 75 267 5.6E-37 T 14-10-2018 IPR002035 von Willebrand factor, type A VAB027_866 00268a9f64524628afa3d121ef704ea5 308 SUPERFAMILY SSF53300 72 270 1.16E-37 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_866 00268a9f64524628afa3d121ef704ea5 308 SMART SM00327 73 246 2.1E-20 T 14-10-2018 IPR002035 von Willebrand factor, type A VAB027_866 00268a9f64524628afa3d121ef704ea5 308 Gene3D G3DSA:3.40.50.410 72 274 3.1E-59 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAB027_2189 6515da1d3c7c4c003226dd3df6b7ba37 179 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 172 5.0E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAB027_1081 b18886f25707da9a2502f145a1e2aee0 301 SUPERFAMILY SSF103481 182 284 1.31E-13 T 14-10-2018 VAB027_1081 b18886f25707da9a2502f145a1e2aee0 301 SUPERFAMILY SSF103481 47 139 1.02E-13 T 14-10-2018 VAB027_1081 b18886f25707da9a2502f145a1e2aee0 301 Pfam PF00892 EamA-like transporter family 9 136 1.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1081 b18886f25707da9a2502f145a1e2aee0 301 Pfam PF00892 EamA-like transporter family 147 281 1.2E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1378 d8e0c43f9765d133ed400130dfd381cf 466 Gene3D G3DSA:2.40.30.10 367 453 5.8E-9 T 14-10-2018 VAB027_1378 d8e0c43f9765d133ed400130dfd381cf 466 Pfam PF01136 Peptidase family U32 80 355 1.2E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAB027_1378 d8e0c43f9765d133ed400130dfd381cf 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAB027_1378 d8e0c43f9765d133ed400130dfd381cf 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 1.1E-20 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 2.7E-62 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 2.5E-217 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.6E-22 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 3.6E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 SUPERFAMILY SSF55604 438 511 4.32E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_1681 ef8c0203747d33faffcab17a0425d6ff 523 Gene3D G3DSA:3.30.1360.60 434 513 6.4E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAB027_2206 35891deb8c989a4d7afd5fcb7163c2e3 419 Pfam PF02321 Outer membrane efflux protein 26 202 4.3E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2206 35891deb8c989a4d7afd5fcb7163c2e3 419 Pfam PF02321 Outer membrane efflux protein 226 404 1.1E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAB027_2206 35891deb8c989a4d7afd5fcb7163c2e3 419 SUPERFAMILY SSF56954 2 408 2.62E-70 T 14-10-2018 VAB027_2206 35891deb8c989a4d7afd5fcb7163c2e3 419 Gene3D G3DSA:1.20.1600.10 24 419 7.7E-68 T 14-10-2018 VAB027_2192 c77028fc81885038be76928e3ef96d89 431 Gene3D G3DSA:3.40.190.10 32 377 1.1E-111 T 14-10-2018 VAB027_2192 c77028fc81885038be76928e3ef96d89 431 Pfam PF13416 Bacterial extracellular solute-binding protein 41 364 2.2E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAB027_2192 c77028fc81885038be76928e3ef96d89 431 Gene3D G3DSA:3.40.190.10 143 416 1.1E-111 T 14-10-2018 VAB027_2192 c77028fc81885038be76928e3ef96d89 431 SUPERFAMILY SSF53850 29 418 9.24E-66 T 14-10-2018 VAB027_455 1d26b884daa1d31ff3c821927d79021f 231 Gene3D G3DSA:1.10.3720.10 3 226 7.3E-60 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_455 1d26b884daa1d31ff3c821927d79021f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 226 1.7E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_455 1d26b884daa1d31ff3c821927d79021f 231 SUPERFAMILY SSF161098 6 219 1.96E-50 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_455 1d26b884daa1d31ff3c821927d79021f 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 222 2.4E-73 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VAB027_2794 f08bdbe7be3d8cd843103c5f10876e6d 186 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VAB027_2794 f08bdbe7be3d8cd843103c5f10876e6d 186 SUPERFAMILY SSF52218 1 185 4.19E-58 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2794 f08bdbe7be3d8cd843103c5f10876e6d 186 Gene3D G3DSA:3.40.50.360 1 186 3.2E-63 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2794 f08bdbe7be3d8cd843103c5f10876e6d 186 Pfam PF03358 NADPH-dependent FMN reductase 12 131 7.2E-11 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VAB027_130 3cbf11b07611d60b52f768d33bb3b1c0 210 SUPERFAMILY SSF46689 4 77 3.73E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_130 3cbf11b07611d60b52f768d33bb3b1c0 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAB027_130 3cbf11b07611d60b52f768d33bb3b1c0 210 Gene3D G3DSA:1.10.357.10 53 210 2.4E-35 T 14-10-2018 VAB027_130 3cbf11b07611d60b52f768d33bb3b1c0 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_130 3cbf11b07611d60b52f768d33bb3b1c0 210 Gene3D G3DSA:1.10.10.60 2 52 3.4E-23 T 14-10-2018 VAB027_1076 464e2e0ddd9fb2d2b102a6fc2ef099e2 212 Gene3D G3DSA:3.40.50.720 1 211 6.9E-49 T 14-10-2018 VAB027_1076 464e2e0ddd9fb2d2b102a6fc2ef099e2 212 SUPERFAMILY SSF51735 1 210 2.93E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_1076 464e2e0ddd9fb2d2b102a6fc2ef099e2 212 Pfam PF13460 NAD(P)H-binding 7 197 3.3E-33 T 14-10-2018 IPR016040 NAD(P)-binding domain VAB027_1211 57a7128912f410c9704191965bbca784 578 SUPERFAMILY SSF58104 269 577 2.88E-67 T 14-10-2018 VAB027_1211 57a7128912f410c9704191965bbca784 578 SMART SM00283 316 577 9.0E-57 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1211 57a7128912f410c9704191965bbca784 578 SMART SM00304 248 301 6.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1211 57a7128912f410c9704191965bbca784 578 Gene3D G3DSA:1.10.287.950 247 578 8.9E-65 T 14-10-2018 VAB027_1211 57a7128912f410c9704191965bbca784 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 544 1.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 Gene3D G3DSA:3.20.20.60 1 419 1.1E-181 T 14-10-2018 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 2.3E-113 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 1.3E-89 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 Pfam PF00463 Isocitrate lyase family 14 257 1.0E-61 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 Pfam PF00463 Isocitrate lyase family 258 436 3.7E-52 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 PIRSF PIRSF001362 1 437 1.1E-224 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAB027_1394 f60d6dd7c18a9304dac79fc01cb1cef1 437 SUPERFAMILY SSF51621 6 436 5.83E-154 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAB027_567 65882b81a0ca31d9e4790b4673c92fe1 490 Gene3D G3DSA:1.20.1250.20 7 475 2.9E-61 T 14-10-2018 VAB027_567 65882b81a0ca31d9e4790b4673c92fe1 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 461 1.2E-40 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VAB027_567 65882b81a0ca31d9e4790b4673c92fe1 490 Pfam PF07690 Major Facilitator Superfamily 10 423 1.7E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_567 65882b81a0ca31d9e4790b4673c92fe1 490 SUPERFAMILY SSF103473 8 473 9.94E-21 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_948 48d957ebcd1855279238981437ede510 99 SUPERFAMILY SSF81296 12 95 6.53E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set VAB027_948 48d957ebcd1855279238981437ede510 99 Gene3D G3DSA:2.60.40.10 4 99 1.5E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VAB027_3269 333cd49e38856ef730c6ce2016470bb8 245 Pfam PF02167 Cytochrome C1 family 34 244 5.1E-15 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VAB027_3269 333cd49e38856ef730c6ce2016470bb8 245 SUPERFAMILY SSF46626 16 209 7.88E-48 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_3269 333cd49e38856ef730c6ce2016470bb8 245 Gene3D G3DSA:1.10.760.10 25 210 2.7E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_2632 d9dae512ed50605530e4da776cbc71ea 274 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 3.1E-76 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 VAB027_3644 78bb020d5d801de2c60b56e022925a41 304 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 13 280 8.0E-41 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system VAB027_504 737c1dfa8a921d0c7da43023b9e44b2f 587 Gene3D G3DSA:1.10.287.950 253 585 1.8E-66 T 14-10-2018 VAB027_504 737c1dfa8a921d0c7da43023b9e44b2f 587 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 369 550 1.6E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_504 737c1dfa8a921d0c7da43023b9e44b2f 587 SUPERFAMILY SSF58104 275 584 2.49E-69 T 14-10-2018 VAB027_504 737c1dfa8a921d0c7da43023b9e44b2f 587 SMART SM00283 326 583 3.1E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_504 737c1dfa8a921d0c7da43023b9e44b2f 587 SMART SM00304 254 307 5.6E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_500 f9249705ffb6af54000d33097dec7f41 513 Pfam PF00474 Sodium:solute symporter family 34 425 8.8E-52 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAB027_500 f9249705ffb6af54000d33097dec7f41 513 Gene3D G3DSA:1.20.1730.10 22 511 1.7E-105 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VAB027_500 f9249705ffb6af54000d33097dec7f41 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 426 6.2E-74 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAB027_1198 b90f6b6e24e2b89e6cc5cb39cc5dfb2c 368 SUPERFAMILY SSF69593 92 244 5.75E-8 T 14-10-2018 VAB027_1198 b90f6b6e24e2b89e6cc5cb39cc5dfb2c 368 Pfam PF01553 Acyltransferase 93 194 1.3E-8 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 SUPERFAMILY SSF53720 6 480 1.07E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 Gene3D G3DSA:3.40.309.10 261 449 1.4E-174 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 Pfam PF00171 Aldehyde dehydrogenase family 26 476 8.1E-164 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 3.7E-203 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 Gene3D G3DSA:3.40.605.10 26 472 1.4E-174 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_2383 2fb6819073f8454cf8c820287ebeb296 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAB027_531 fced9b45e349876c15fb379c06dc64dd 96 SUPERFAMILY SSF54909 2 88 2.06E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_531 fced9b45e349876c15fb379c06dc64dd 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.6E-20 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VAB027_531 fced9b45e349876c15fb379c06dc64dd 96 Gene3D G3DSA:3.30.70.100 1 93 3.9E-26 T 14-10-2018 VAB027_3583 06c3ae0c1dd0dc951e138b3005b55584 190 Gene3D G3DSA:3.40.470.10 1 190 2.9E-71 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_3583 06c3ae0c1dd0dc951e138b3005b55584 190 SMART SM00986 26 182 3.5E-27 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_3583 06c3ae0c1dd0dc951e138b3005b55584 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 2.9E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_3583 06c3ae0c1dd0dc951e138b3005b55584 190 SMART SM00987 26 182 3.5E-27 T 14-10-2018 VAB027_3583 06c3ae0c1dd0dc951e138b3005b55584 190 SUPERFAMILY SSF52141 2 189 4.91E-56 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAB027_1484 30dd59e016e04f65d85d5134e4e60c5a 356 SUPERFAMILY SSF52540 32 243 8.2E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1340 3863118388a7cd99cf10fe08237c6f8c 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 25.4 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VAB027_1340 3863118388a7cd99cf10fe08237c6f8c 187 Gene3D G3DSA:2.60.450.10 59 186 4.2E-37 T 14-10-2018 VAB027_1340 3863118388a7cd99cf10fe08237c6f8c 187 PIRSF PIRSF028513 3 185 2.9E-29 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VAB027_1340 3863118388a7cd99cf10fe08237c6f8c 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 7.8E-51 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VAB027_1340 3863118388a7cd99cf10fe08237c6f8c 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 4.1E-50 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VAB027_1933 8b480b3875f7479e348321ca9f14696e 245 Gene3D G3DSA:3.40.50.150 21 244 3.2E-76 T 14-10-2018 VAB027_1933 8b480b3875f7479e348321ca9f14696e 245 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 21 239 9.8E-88 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VAB027_1933 8b480b3875f7479e348321ca9f14696e 245 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 21 245 37.179 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VAB027_1933 8b480b3875f7479e348321ca9f14696e 245 SUPERFAMILY SSF53335 25 241 5.47E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1933 8b480b3875f7479e348321ca9f14696e 245 Pfam PF13489 Methyltransferase domain 62 206 5.9E-26 T 14-10-2018 VAB027_3102 079a6ce82e23d808168b97682d9881d5 102 SUPERFAMILY SSF102829 6 95 1.96E-24 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily VAB027_3102 079a6ce82e23d808168b97682d9881d5 102 Gene3D G3DSA:1.10.20.30 1 47 5.4E-20 T 14-10-2018 VAB027_3102 079a6ce82e23d808168b97682d9881d5 102 Pfam PF05164 Cell division protein ZapA 6 89 3.3E-20 T 14-10-2018 IPR007838 Cell division protein ZapA-like VAB027_147 6d6f026e1bb665146dedff269a84b84b 196 Pfam PF13511 Domain of unknown function (DUF4124) 14 60 2.0E-10 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 VAB027_186 0a9337da9081babd441d3c1666c82d38 207 SMART SM00072 3 187 5.1E-73 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VAB027_186 0a9337da9081babd441d3c1666c82d38 207 SUPERFAMILY SSF52540 3 189 1.13E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_186 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.40.50.300 8 183 1.8E-73 T 14-10-2018 VAB027_186 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.30.63.10 37 96 1.8E-73 T 14-10-2018 VAB027_186 0a9337da9081babd441d3c1666c82d38 207 Pfam PF00625 Guanylate kinase 5 185 1.1E-59 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VAB027_186 0a9337da9081babd441d3c1666c82d38 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.5E-75 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VAB027_186 0a9337da9081babd441d3c1666c82d38 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.662 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VAB027_186 0a9337da9081babd441d3c1666c82d38 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VAB027_1398 9168510bc498fc983a9140026413c68e 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.5E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC VAB027_1398 9168510bc498fc983a9140026413c68e 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.5E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC VAB027_1398 9168510bc498fc983a9140026413c68e 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.7E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC VAB027_1398 9168510bc498fc983a9140026413c68e 110 SMART SM01323 18 102 3.2E-38 T 14-10-2018 IPR003849 Preprotein translocase YajC VAB027_1398 9168510bc498fc983a9140026413c68e 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 1.9E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC VAB027_569 f699e93b8caeff7ce500890192e5d866 83 Pfam PF03891 Domain of unknown function (DUF333) 33 79 4.6E-20 T 14-10-2018 IPR005590 Protein of unknown function DUF333 VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 Pfam PF00266 Aminotransferase class-V 8 352 2.8E-62 T 14-10-2018 IPR000192 Aminotransferase class V domain VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 SUPERFAMILY SSF53383 7 360 3.61E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 1.2E-160 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 Gene3D G3DSA:3.40.640.10 21 261 6.9E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 Gene3D G3DSA:3.90.1150.10 262 364 3.9E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.432 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VAB027_1839 30cc6f64a2caac4f2a8dc61393e36aac 364 PIRSF PIRSF000525 2 364 8.8E-153 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VAB027_2188 989688585693b2d61e08530fa06d18bb 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.3E-29 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VAB027_2188 989688585693b2d61e08530fa06d18bb 134 Gene3D G3DSA:3.30.420.270 61 129 7.9E-12 T 14-10-2018 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 410 1.0E-141 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 PIRSF PIRSF000521 2 128 0.0065 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 PIRSF PIRSF000521 122 154 3.1 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 PIRSF PIRSF000521 175 411 2.6E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 409 3.0E-197 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 Pfam PF00202 Aminotransferase class-III 16 407 1.9E-74 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 Gene3D G3DSA:3.90.1150.10 7 405 3.6E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 SUPERFAMILY SSF53383 3 408 2.77E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAB027_361 fdb030a102892150dc20b5f5040091a1 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAB027_361 fdb030a102892150dc20b5f5040091a1 421 Gene3D G3DSA:3.40.640.10 54 313 3.6E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAB027_307 c68bfdcc7340d179e827515e6ab80d14 353 SUPERFAMILY SSF58100 38 342 8.11E-13 T 14-10-2018 VAB027_307 c68bfdcc7340d179e827515e6ab80d14 353 Gene3D G3DSA:1.20.1170.10 38 352 1.6E-6 T 14-10-2018 VAB027_3670 535f86728fdcea88b20519d51873562d 699 SUPERFAMILY SSF56935 37 699 1.05E-127 T 14-10-2018 VAB027_3670 535f86728fdcea88b20519d51873562d 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 1.2E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VAB027_3670 535f86728fdcea88b20519d51873562d 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 698 5.1E-106 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VAB027_3670 535f86728fdcea88b20519d51873562d 699 Gene3D G3DSA:2.40.170.20 170 699 3.4E-129 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAB027_3670 535f86728fdcea88b20519d51873562d 699 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 14-10-2018 IPR010916 TonB box, conserved site VAB027_3670 535f86728fdcea88b20519d51873562d 699 Pfam PF00593 TonB dependent receptor 261 698 4.6E-60 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAB027_3670 535f86728fdcea88b20519d51873562d 699 Gene3D G3DSA:2.170.130.10 35 169 3.9E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAB027_936 2def0152256dd61c8c1297dcd760eaa0 98 Pfam PF02001 Protein of unknown function DUF134 2 91 1.4E-18 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VAB027_936 2def0152256dd61c8c1297dcd760eaa0 98 Hamap MF_00674 UPF0251 protein . 2 98 23.422 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VAB027_727 a74eba615359b2a3e6d35523bef20bc6 71 SUPERFAMILY SSF81301 5 71 1.47E-11 T 14-10-2018 VAB027_727 a74eba615359b2a3e6d35523bef20bc6 71 Pfam PF04229 GrpB protein 10 69 3.7E-8 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase VAB027_727 a74eba615359b2a3e6d35523bef20bc6 71 Gene3D G3DSA:3.30.460.10 3 71 1.4E-7 T 14-10-2018 VAB027_749 a38c75003a940e10185f000b3defb8da 179 Pfam PF00857 Isochorismatase family 7 155 1.2E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VAB027_749 a38c75003a940e10185f000b3defb8da 179 SUPERFAMILY SSF52499 1 179 4.84E-48 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_749 a38c75003a940e10185f000b3defb8da 179 Gene3D G3DSA:3.40.50.850 1 179 5.5E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAB027_893 29147c6aab40bfbc93ca706f07559d24 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 108 3.6E-21 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VAB027_893 29147c6aab40bfbc93ca706f07559d24 115 PIRSF PIRSF028299 1 114 1.3E-29 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 Gene3D G3DSA:1.10.287.950 334 663 3.9E-71 T 14-10-2018 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 SMART SM00304 334 386 3.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 629 9.3E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 SUPERFAMILY SSF58104 354 663 3.92E-72 T 14-10-2018 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 SMART SM00283 401 662 7.0E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 3.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 3.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_2542 df7daf11b930eaff3ea5c2ff82905bf5 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 3.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAB027_3410 e1e92ba95c371d48194759557b8d90a6 1279 Pfam PF13116 Protein of unknown function 493 779 2.2E-90 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 VAB027_3410 e1e92ba95c371d48194759557b8d90a6 1279 Pfam PF13502 AsmA-like C-terminal region 1017 1257 1.1E-59 T 14-10-2018 IPR032712 AsmA-like, C-terminal VAB027_3410 e1e92ba95c371d48194759557b8d90a6 1279 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1267 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VAB027_2699 d857db19481f8874cf070ff51f91b9cf 258 Pfam PF13614 AAA domain 4 180 2.3E-49 T 14-10-2018 IPR025669 AAA domain VAB027_2699 d857db19481f8874cf070ff51f91b9cf 258 SUPERFAMILY SSF52540 1 252 3.62E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2699 d857db19481f8874cf070ff51f91b9cf 258 PIRSF PIRSF009320 1 76 1.1E-13 T 14-10-2018 VAB027_2699 d857db19481f8874cf070ff51f91b9cf 258 PIRSF PIRSF009320 103 241 3.8E-7 T 14-10-2018 VAB027_2699 d857db19481f8874cf070ff51f91b9cf 258 Gene3D G3DSA:3.40.50.300 1 253 4.7E-67 T 14-10-2018 VAB027_2164 491633073736bb7840a47cbb37347a46 158 Pfam PF11749 Protein of unknown function (DUF3305) 54 148 1.6E-18 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 Gene3D G3DSA:3.30.565.10 273 431 4.9E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 SUPERFAMILY SSF47384 177 220 4.12E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 7.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 7.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 7.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 7.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 264 5.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 426 1.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 SUPERFAMILY SSF55874 268 426 1.31E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 SMART SM00387 312 428 1.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_1767 011ad60050ef8f544dcd65a9993f4384 434 Gene3D G3DSA:1.10.287.130 171 266 7.6E-19 T 14-10-2018 VAB027_1262 f93e6abea7f74f0499e22ff04bf18175 193 SUPERFAMILY SSF52218 10 183 4.89E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_1262 f93e6abea7f74f0499e22ff04bf18175 193 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 187 48.651 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VAB027_1262 f93e6abea7f74f0499e22ff04bf18175 193 Gene3D G3DSA:3.40.50.360 9 186 1.6E-56 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_1262 f93e6abea7f74f0499e22ff04bf18175 193 Pfam PF02525 Flavodoxin-like fold 10 177 1.5E-45 T 14-10-2018 IPR003680 Flavodoxin-like fold VAB027_1306 e79ec5fcb603b2d3dd9cfa64a5c1c928 189 Gene3D G3DSA:2.60.120.10 2 140 5.2E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VAB027_1306 e79ec5fcb603b2d3dd9cfa64a5c1c928 189 SUPERFAMILY SSF51206 15 137 4.32E-15 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VAB027_2274 5a45fa4fa231d5ceb5f56aade54d6ef2 382 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.7E-189 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VAB027_2274 5a45fa4fa231d5ceb5f56aade54d6ef2 382 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 381 23.55 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VAB027_2274 5a45fa4fa231d5ceb5f56aade54d6ef2 382 Pfam PF06965 Na+/H+ antiporter 1 7 373 4.7E-144 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VAB027_2274 5a45fa4fa231d5ceb5f56aade54d6ef2 382 Gene3D G3DSA:1.20.1530.10 2 380 9.3E-147 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VAB027_1115 ab58555af656f95155cac6ea94920579 477 Pfam PF03600 Citrate transporter 46 421 2.3E-52 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VAB027_1748 e5f953cec0ac237dd85af075e94813ea 143 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 132 3.7E-41 T 14-10-2018 IPR039366 YscW/ExsB VAB027_3101 18ff42ed945da60b29ca88e98c4b24b4 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 6.8E-35 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAB027_3101 18ff42ed945da60b29ca88e98c4b24b4 191 Gene3D G3DSA:1.20.120.740 4 191 1.1E-46 T 14-10-2018 VAB027_3101 18ff42ed945da60b29ca88e98c4b24b4 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.537 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAB027_3101 18ff42ed945da60b29ca88e98c4b24b4 191 SUPERFAMILY SSF101327 7 178 4.45E-42 T 14-10-2018 IPR036255 YgfB-like superfamily VAB027_3101 18ff42ed945da60b29ca88e98c4b24b4 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 21 176 2.5E-11 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAB027_3727 d54489ade848ce71cb9f78d66f1553ea 257 Gene3D G3DSA:3.40.50.300 1 255 1.9E-77 T 14-10-2018 VAB027_3727 d54489ade848ce71cb9f78d66f1553ea 257 SUPERFAMILY SSF52540 2 253 4.37E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3727 d54489ade848ce71cb9f78d66f1553ea 257 PIRSF PIRSF009320 2 89 2.8E-13 T 14-10-2018 VAB027_3727 d54489ade848ce71cb9f78d66f1553ea 257 PIRSF PIRSF009320 86 253 4.1E-9 T 14-10-2018 VAB027_3727 d54489ade848ce71cb9f78d66f1553ea 257 Pfam PF13614 AAA domain 2 178 1.9E-62 T 14-10-2018 IPR025669 AAA domain VAB027_422 5d8edc37f2a25ddde3956bb46e3fc211 166 Gene3D G3DSA:3.10.180.10 3 153 7.6E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_422 5d8edc37f2a25ddde3956bb46e3fc211 166 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 151 1.3E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAB027_422 5d8edc37f2a25ddde3956bb46e3fc211 166 SUPERFAMILY SSF54593 6 156 5.91E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAB027_422 5d8edc37f2a25ddde3956bb46e3fc211 166 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 4 165 3.7E-103 T 14-10-2018 IPR019883 Lactoylglutathione lyase VAB027_2278 9108c1c974ed78cd0b2b142875c0ec4b 458 Pfam PF01554 MatE 25 185 1.3E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2278 9108c1c974ed78cd0b2b142875c0ec4b 458 Pfam PF01554 MatE 252 413 3.0E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2278 9108c1c974ed78cd0b2b142875c0ec4b 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 422 6.8E-63 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2278 9108c1c974ed78cd0b2b142875c0ec4b 458 PIRSF PIRSF006603 8 458 4.0E-67 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_2703 cd4c3b21ac067a2d8caf9fb815f95dbe 126 Gene3D G3DSA:3.40.50.2300 1 126 3.4E-41 T 14-10-2018 VAB027_2703 cd4c3b21ac067a2d8caf9fb815f95dbe 126 SMART SM00448 5 119 5.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2703 cd4c3b21ac067a2d8caf9fb815f95dbe 126 SUPERFAMILY SSF52172 3 124 7.54E-38 T 14-10-2018 IPR011006 CheY-like superfamily VAB027_2703 cd4c3b21ac067a2d8caf9fb815f95dbe 126 Pfam PF00072 Response regulator receiver domain 7 119 1.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 PRINTS PR01021 OMPA domain signature 257 273 5.5E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 PRINTS PR01021 OMPA domain signature 212 234 5.5E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 PRINTS PR01021 OMPA domain signature 242 257 5.5E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 Pfam PF01389 OmpA-like transmembrane domain 20 172 3.1E-44 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 SUPERFAMILY SSF56925 19 172 2.46E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 Gene3D G3DSA:3.30.1330.60 189 318 4.8E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 SUPERFAMILY SSF103088 184 312 2.35E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 Gene3D G3DSA:2.40.160.20 5 188 1.0E-43 T 14-10-2018 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 ProSitePatterns PS01068 OmpA-like domain. 244 288 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VAB027_2855 50ff8683d21b1b339939a35aa4f64f96 321 Pfam PF00691 OmpA family 211 306 1.8E-26 T 14-10-2018 IPR006665 OmpA-like domain VAB027_1524 5b1e929666908750ec628aae8d8e37ab 103 SUPERFAMILY SSF158452 2 102 7.85E-32 T 14-10-2018 IPR036814 YqcC-like superfamily VAB027_1524 5b1e929666908750ec628aae8d8e37ab 103 Pfam PF04287 tRNA pseudouridine synthase C 8 100 8.4E-31 T 14-10-2018 IPR023376 YqcC-like domain VAB027_1524 5b1e929666908750ec628aae8d8e37ab 103 PIRSF PIRSF006257 1 103 3.2E-39 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 VAB027_1524 5b1e929666908750ec628aae8d8e37ab 103 Gene3D G3DSA:1.20.1440.40 1 103 1.3E-29 T 14-10-2018 IPR036814 YqcC-like superfamily VAB027_1527 86f76ccb4375427ad9886e782dc1c125 294 SUPERFAMILY SSF48576 3 288 1.15E-85 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAB027_1527 86f76ccb4375427ad9886e782dc1c125 294 Gene3D G3DSA:1.10.600.10 1 294 2.4E-119 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAB027_1527 86f76ccb4375427ad9886e782dc1c125 294 Pfam PF00348 Polyprenyl synthetase 31 268 1.3E-56 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VAB027_1527 86f76ccb4375427ad9886e782dc1c125 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAB027_1527 86f76ccb4375427ad9886e782dc1c125 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAB027_3090 8b2804c809639c67317bfe25920ebefc 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 14 149 2.1E-33 T 14-10-2018 VAB027_3090 8b2804c809639c67317bfe25920ebefc 156 PIRSF PIRSF004923 1 156 7.8E-40 T 14-10-2018 IPR026268 Protein RseC VAB027_898 dac0581548f2e20111588fb901ace3ab 244 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.2E-56 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VAB027_898 dac0581548f2e20111588fb901ace3ab 244 Pfam PF04973 Nicotinamide mononucleotide transporter 25 227 1.0E-52 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 337 8.3E-94 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 Gene3D G3DSA:1.10.287.470 91 150 1.7E-74 T 14-10-2018 VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 250 2.0E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 Gene3D G3DSA:2.40.420.20 37 334 1.7E-74 T 14-10-2018 VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 Gene3D G3DSA:2.40.30.170 43 267 1.7E-74 T 14-10-2018 VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 SUPERFAMILY SSF111369 46 264 8.37E-31 T 14-10-2018 VAB027_2322 a3ac9481efe35a4352ea5fdf29030057 343 Gene3D G3DSA:2.40.50.100 57 189 1.7E-74 T 14-10-2018 VAB027_3418 7fc676c4627d18f7a234225b986295cc 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 6.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3418 7fc676c4627d18f7a234225b986295cc 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3418 7fc676c4627d18f7a234225b986295cc 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 8.8E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Pfam PF00557 Metallopeptidase family M24 309 525 6.6E-48 T 14-10-2018 IPR000994 Peptidase M24 VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 138 2.7E-15 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Pfam PF16188 C-terminal region of peptidase_M24 534 594 1.9E-22 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.9E-33 T 14-10-2018 VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Gene3D G3DSA:3.40.350.10 147 290 1.9E-24 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 SUPERFAMILY SSF55920 303 559 1.44E-59 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Gene3D G3DSA:3.90.230.10 300 594 6.4E-100 T 14-10-2018 VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 SUPERFAMILY SSF53092 7 130 9.94E-11 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VAB027_59 10a2ea4bf2dae9efc959101610347dc7 597 Gene3D G3DSA:3.40.350.10 2 146 1.5E-35 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VAB027_1389 7f8818329ea1b9f3276685117a1b3511 258 PIRSF PIRSF028756 1 258 1.2E-134 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 VAB027_1389 7f8818329ea1b9f3276685117a1b3511 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 230 3.4E-116 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related VAB027_1389 7f8818329ea1b9f3276685117a1b3511 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 230 3.5E-116 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 VAB027_1389 7f8818329ea1b9f3276685117a1b3511 258 SUPERFAMILY SSF52540 35 223 2.17E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1389 7f8818329ea1b9f3276685117a1b3511 258 Gene3D G3DSA:3.40.50.300 1 242 2.5E-100 T 14-10-2018 VAB027_1533 d034340555109cdeac889c25597cd500 128 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.1E-31 T 14-10-2018 IPR006696 Protein of unknown function DUF423 VAB027_1840 66501ef7eb10dca82c3ac0f0bdae1ded 329 SUPERFAMILY SSF56059 51 285 2.89E-20 T 14-10-2018 VAB027_1840 66501ef7eb10dca82c3ac0f0bdae1ded 329 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 10 323 6.5E-167 T 14-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VAB027_1840 66501ef7eb10dca82c3ac0f0bdae1ded 329 Pfam PF14397 Sugar-transfer associated ATP-grasp 27 299 5.6E-114 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAB027_1687 33390ce7e30f2cc2cb845e75d3adb083 198 Pfam PF05036 Sporulation related domain 122 187 3.7E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAB027_1687 33390ce7e30f2cc2cb845e75d3adb083 198 Gene3D G3DSA:3.30.70.1070 116 190 6.8E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_1687 33390ce7e30f2cc2cb845e75d3adb083 198 SUPERFAMILY SSF110997 121 194 2.48E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAB027_99 a54fbd7abbb3cc23be8a356168811175 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 1.0E-46 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 VAB027_1323 a89a3cb4f2ce3f706c2b387c8fb81383 176 Gene3D G3DSA:3.90.80.10 1 175 2.9E-67 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAB027_1323 a89a3cb4f2ce3f706c2b387c8fb81383 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAB027_1323 a89a3cb4f2ce3f706c2b387c8fb81383 176 SUPERFAMILY SSF50324 3 174 1.96E-65 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAB027_1323 a89a3cb4f2ce3f706c2b387c8fb81383 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.0E-52 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAB027_1323 a89a3cb4f2ce3f706c2b387c8fb81383 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.05 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAB027_441 83fa90fd4325236580057633554be094 364 SUPERFAMILY SSF53822 27 363 3.33E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_441 83fa90fd4325236580057633554be094 364 Pfam PF13407 Periplasmic binding protein domain 69 323 4.9E-16 T 14-10-2018 IPR025997 Periplasmic binding protein VAB027_441 83fa90fd4325236580057633554be094 364 Gene3D G3DSA:3.40.50.2300 33 362 4.6E-141 T 14-10-2018 VAB027_441 83fa90fd4325236580057633554be094 364 Gene3D G3DSA:3.40.50.2300 180 358 4.6E-141 T 14-10-2018 VAB027_2222 0cc1b57929919044d5f5f7190b2834b7 838 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 22 807 1.6E-250 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 VAB027_2222 0cc1b57929919044d5f5f7190b2834b7 838 Hamap MF_01871 UPF0753 protein . 17 822 23.33 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 VAB027_2216 da4bc682e1013b5cade1183a9d2073f3 105 Gene3D G3DSA:2.30.130.30 2 104 2.3E-43 T 14-10-2018 VAB027_2216 da4bc682e1013b5cade1183a9d2073f3 105 Pfam PF04266 ASCH domain 8 93 5.2E-14 T 14-10-2018 IPR007374 ASCH domain VAB027_2216 da4bc682e1013b5cade1183a9d2073f3 105 SUPERFAMILY SSF88697 4 103 8.45E-32 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_2216 da4bc682e1013b5cade1183a9d2073f3 105 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.342 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VAB027_2216 da4bc682e1013b5cade1183a9d2073f3 105 PIRSF PIRSF029143 2 105 2.9E-43 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VAB027_2216 da4bc682e1013b5cade1183a9d2073f3 105 SMART SM01022 7 105 2.2E-24 T 14-10-2018 IPR007374 ASCH domain VAB027_1339 77e6c7e6f739d74ffd8e3b2e48d9093a 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 23.923 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VAB027_1339 77e6c7e6f739d74ffd8e3b2e48d9093a 164 Pfam PF03968 OstA-like protein 30 141 1.6E-28 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VAB027_1339 77e6c7e6f739d74ffd8e3b2e48d9093a 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.8E-46 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VAB027_1339 77e6c7e6f739d74ffd8e3b2e48d9093a 164 Gene3D G3DSA:2.60.450.10 20 157 1.2E-38 T 14-10-2018 VAB027_1889 327e4ccc947bbb172080e6e231343b78 255 Pfam PF01909 Nucleotidyltransferase domain 37 82 1.6E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VAB027_1889 327e4ccc947bbb172080e6e231343b78 255 SUPERFAMILY SSF81301 36 101 8.72E-8 T 14-10-2018 VAB027_1889 327e4ccc947bbb172080e6e231343b78 255 Gene3D G3DSA:3.30.460.10 6 108 1.5E-6 T 14-10-2018 VAB027_3428 a132da37980ba72227c07ce83e69b6c6 281 Pfam PF13401 AAA domain 42 167 4.8E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3428 a132da37980ba72227c07ce83e69b6c6 281 Gene3D G3DSA:3.40.50.300 30 183 4.0E-11 T 14-10-2018 VAB027_3428 a132da37980ba72227c07ce83e69b6c6 281 SUPERFAMILY SSF52540 6 260 2.68E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_86 c2c35024cef567411a222dd554f209fa 179 SUPERFAMILY SSF64288 8 174 2.86E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAB027_86 c2c35024cef567411a222dd554f209fa 179 Gene3D G3DSA:3.40.1410.10 9 174 1.5E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAB027_86 c2c35024cef567411a222dd554f209fa 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.752 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VAB027_86 c2c35024cef567411a222dd554f209fa 179 Pfam PF04345 Chorismate lyase 11 179 6.6E-80 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VAB027_2595 ce88f6b5b164bf6ca32139425aaa087d 323 Pfam PF13406 Transglycosylase SLT domain 23 319 5.4E-110 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 VAB027_2595 ce88f6b5b164bf6ca32139425aaa087d 323 Gene3D G3DSA:1.10.530.10 66 318 3.2E-93 T 14-10-2018 VAB027_2595 ce88f6b5b164bf6ca32139425aaa087d 323 Gene3D G3DSA:1.10.8.350 33 199 3.2E-93 T 14-10-2018 VAB027_2595 ce88f6b5b164bf6ca32139425aaa087d 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 6.4E-112 T 14-10-2018 IPR011970 Lytic murein transglycosylase VAB027_2595 ce88f6b5b164bf6ca32139425aaa087d 323 SUPERFAMILY SSF53955 8 322 2.06E-102 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VAB027_1354 212a51624def1309ec691acde4b36031 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.5E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 Gene3D G3DSA:3.40.50.1370 135 292 1.9E-120 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.1E-115 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.51 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.7E-33 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 Gene3D G3DSA:3.40.50.1370 8 304 1.9E-120 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.2E-35 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.2E-35 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.2E-35 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.2E-35 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.2E-35 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-35 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAB027_1354 212a51624def1309ec691acde4b36031 309 SUPERFAMILY SSF53671 4 306 1.7E-101 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAB027_1485 a3d76c596460c6bf6e07710750616288 179 Pfam PF01695 IstB-like ATP binding protein 19 72 1.2E-5 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 VAB027_1485 a3d76c596460c6bf6e07710750616288 179 SUPERFAMILY SSF52540 26 108 1.53E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_113 31bb0ca7c459e02367f43264845fe9bc 198 Pfam PF03942 DTW domain 4 183 6.2E-44 T 14-10-2018 IPR005636 DTW VAB027_113 31bb0ca7c459e02367f43264845fe9bc 198 SMART SM01144 1 191 2.9E-52 T 14-10-2018 IPR005636 DTW VAB027_2712 9ea66863ccde580807291d86290ec01d 142 PIRSF PIRSF000714 3 140 1.8E-51 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VAB027_2712 9ea66863ccde580807291d86290ec01d 142 Gene3D G3DSA:3.30.428.10 2 141 5.0E-42 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2712 9ea66863ccde580807291d86290ec01d 142 SUPERFAMILY SSF54197 3 136 6.8E-34 T 14-10-2018 IPR036265 HIT-like superfamily VAB027_2712 9ea66863ccde580807291d86290ec01d 142 Pfam PF01230 HIT domain 11 101 2.7E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VAB027_1192 1547056db8f546a50257db7333e24a48 311 Pfam PF05661 Protein of unknown function (DUF808) 4 302 9.6E-113 T 14-10-2018 IPR008526 Inner membrane protein YedI VAB027_1192 1547056db8f546a50257db7333e24a48 311 PIRSF PIRSF016660 1 311 1.4E-117 T 14-10-2018 IPR008526 Inner membrane protein YedI VAB027_3324 4ec422137e7e6b8aaa8b2125445bd6bc 168 Gene3D G3DSA:3.30.70.560 2 153 4.0E-33 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3324 4ec422137e7e6b8aaa8b2125445bd6bc 168 SUPERFAMILY SSF55083 1 148 1.31E-37 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3324 4ec422137e7e6b8aaa8b2125445bd6bc 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 2.8E-33 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3324 4ec422137e7e6b8aaa8b2125445bd6bc 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.2E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_1588 ecabd9a2a82ed9e4d637def932c437a4 299 Pfam PF10124 Mu-like prophage major head subunit gpT 10 298 3.0E-110 T 14-10-2018 IPR018774 Bacteriophage Mu, GpT VAB027_1109 bbf93ac1e5750e3aeb335e798bf5786c 119 Pfam PF04219 Protein of unknown function, DUF 12 100 1.1E-35 T 14-10-2018 IPR007335 Protein of unknown function DUF413 VAB027_1175 a53cd9aafdb41290f2b62dc254f8ab9c 81 Gene3D G3DSA:2.30.30.400 2 80 2.1E-16 T 14-10-2018 IPR038626 Rof-like superfamily VAB027_1175 a53cd9aafdb41290f2b62dc254f8ab9c 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 6.3E-30 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VAB027_1175 a53cd9aafdb41290f2b62dc254f8ab9c 81 SUPERFAMILY SSF101744 1 80 3.92E-23 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VAB027_3680 627c94abab2f84f646d59ac3088b6430 680 Gene3D G3DSA:1.10.1370.40 13 675 4.7E-272 T 14-10-2018 VAB027_3680 627c94abab2f84f646d59ac3088b6430 680 SUPERFAMILY SSF55486 1 677 4.08E-210 T 14-10-2018 VAB027_3680 627c94abab2f84f646d59ac3088b6430 680 Pfam PF01432 Peptidase family M3 222 677 3.7E-165 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VAB027_3680 627c94abab2f84f646d59ac3088b6430 680 Gene3D G3DSA:1.10.1370.10 140 610 4.7E-272 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VAB027_2788 69383ad28576cc31e333b5e8a327472b 155 Pfam PF00578 AhpC/TSA family 7 134 2.9E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAB027_2788 69383ad28576cc31e333b5e8a327472b 155 SUPERFAMILY SSF52833 1 152 2.19E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_2788 69383ad28576cc31e333b5e8a327472b 155 Gene3D G3DSA:3.40.30.10 3 154 5.3E-46 T 14-10-2018 VAB027_2495 9f75dad1b60153b3f87fc2ad52857ace 151 Gene3D G3DSA:3.10.450.50 1 151 1.2E-50 T 14-10-2018 VAB027_2495 9f75dad1b60153b3f87fc2ad52857ace 151 SUPERFAMILY SSF103642 131 151 5.07E-7 T 14-10-2018 VAB027_2495 9f75dad1b60153b3f87fc2ad52857ace 151 Pfam PF02810 SEC-C motif 134 151 2.7E-8 T 14-10-2018 IPR004027 SEC-C motif VAB027_2495 9f75dad1b60153b3f87fc2ad52857ace 151 SUPERFAMILY SSF54427 24 126 4.56E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily VAB027_2495 9f75dad1b60153b3f87fc2ad52857ace 151 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 125 25.597 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 VAB027_1062 1e658ba64b756c8c8df1e39b503724a3 232 Gene3D G3DSA:3.40.605.10 4 222 2.4E-9 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAB027_1062 1e658ba64b756c8c8df1e39b503724a3 232 SUPERFAMILY SSF53720 10 179 3.67E-11 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAB027_2537 03230f687d71ff67a5963de7339e78d8 286 SUPERFAMILY SSF56112 31 268 9.04E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VAB027_2537 03230f687d71ff67a5963de7339e78d8 286 Pfam PF01636 Phosphotransferase enzyme family 32 235 2.4E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VAB027_2537 03230f687d71ff67a5963de7339e78d8 286 Gene3D G3DSA:3.90.1200.10 106 285 1.8E-14 T 14-10-2018 VAB027_1350 2d7429d1eba9e31399f264467c65c9ec 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 8.7E-186 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_1350 2d7429d1eba9e31399f264467c65c9ec 419 Gene3D G3DSA:3.65.10.10 13 414 4.3E-175 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAB027_1350 2d7429d1eba9e31399f264467c65c9ec 419 Gene3D G3DSA:3.65.10.10 22 230 4.3E-175 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAB027_1350 2d7429d1eba9e31399f264467c65c9ec 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.068 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAB027_1350 2d7429d1eba9e31399f264467c65c9ec 419 SUPERFAMILY SSF55205 6 418 9.65E-144 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VAB027_1350 2d7429d1eba9e31399f264467c65c9ec 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.2E-123 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VAB027_309 24977213a97078036f054a70d46fc827 354 SUPERFAMILY SSF58100 73 330 1.75E-6 T 14-10-2018 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 Pfam PF01791 DeoC/LacD family aldolase 11 240 4.8E-48 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 SMART SM01133 10 245 2.9E-80 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 SUPERFAMILY SSF51569 6 246 7.43E-82 T 14-10-2018 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 Gene3D G3DSA:3.20.20.70 1 249 3.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 1.6E-81 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 52.809 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VAB027_2981 1d1a0fad4152f97711010733e3d27c0c 259 PIRSF PIRSF001357 5 254 4.8E-77 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAB027_2972 fc2b7afab1a1d870b6e9f66f8077ab5e 561 SUPERFAMILY SSF56801 15 547 3.4E-109 T 14-10-2018 VAB027_2972 fc2b7afab1a1d870b6e9f66f8077ab5e 561 Gene3D G3DSA:3.40.50.12780 15 433 9.6E-85 T 14-10-2018 VAB027_2972 fc2b7afab1a1d870b6e9f66f8077ab5e 561 Pfam PF00501 AMP-binding enzyme 22 440 3.7E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAB027_2972 fc2b7afab1a1d870b6e9f66f8077ab5e 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site VAB027_2773 375765a73f4a5eb984623802d3700f24 153 Pfam PF03646 FlaG protein 52 150 1.2E-25 T 14-10-2018 IPR005186 FlaG protein VAB027_2773 375765a73f4a5eb984623802d3700f24 153 Gene3D G3DSA:3.30.160.170 44 143 8.3E-15 T 14-10-2018 IPR035924 FlaG-like superfamily VAB027_2773 375765a73f4a5eb984623802d3700f24 153 SUPERFAMILY SSF160214 57 150 2.62E-23 T 14-10-2018 IPR035924 FlaG-like superfamily VAB027_1454 c4025aa0e39b28339b4cff8c5ce341ab 132 Pfam PF13840 ACT domain 72 126 2.4E-13 T 14-10-2018 IPR027795 CASTOR, ACT domain VAB027_1454 c4025aa0e39b28339b4cff8c5ce341ab 132 SUPERFAMILY SSF55021 2 65 8.24E-18 T 14-10-2018 VAB027_1454 c4025aa0e39b28339b4cff8c5ce341ab 132 Pfam PF10000 ACT domain 2 68 1.3E-24 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 VAB027_1454 c4025aa0e39b28339b4cff8c5ce341ab 132 Gene3D G3DSA:3.30.2130.10 1 132 3.5E-48 T 14-10-2018 VAB027_1454 c4025aa0e39b28339b4cff8c5ce341ab 132 SUPERFAMILY SSF55021 70 128 6.87E-20 T 14-10-2018 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 Gene3D G3DSA:3.40.50.1400 163 301 2.1E-96 T 14-10-2018 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 Pfam PF00762 Ferrochelatase 7 319 3.6E-111 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.906 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 SUPERFAMILY SSF53800 4 319 1.23E-102 T 14-10-2018 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 Gene3D G3DSA:3.40.50.1400 8 319 2.1E-96 T 14-10-2018 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAB027_1674 7e7c93bd88194f6daa0c7ccb2f578e4a 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 319 2.4E-108 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAB027_2695 e2f32ac7231870a57fbb58d9bee22976 207 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAB027_2695 e2f32ac7231870a57fbb58d9bee22976 207 SMART SM00382 26 207 1.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_2695 e2f32ac7231870a57fbb58d9bee22976 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 3.4E-79 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VAB027_2695 e2f32ac7231870a57fbb58d9bee22976 207 Pfam PF00005 ABC transporter 18 158 5.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAB027_2695 e2f32ac7231870a57fbb58d9bee22976 207 Gene3D G3DSA:3.40.50.300 1 197 1.2E-42 T 14-10-2018 VAB027_2695 e2f32ac7231870a57fbb58d9bee22976 207 SUPERFAMILY SSF52540 2 194 5.88E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 Gene3D G3DSA:3.40.50.720 2 164 1.9E-53 T 14-10-2018 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 Gene3D G3DSA:1.10.3730.10 165 272 1.8E-33 T 14-10-2018 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.8E-29 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 PIRSF PIRSF000193 3 270 5.1E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 SUPERFAMILY SSF48179 162 270 2.04E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.973 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 8.9E-26 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 7.7E-72 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAB027_3363 e348c401b47fbd6ffbd6ae946b2d81a3 272 SUPERFAMILY SSF51735 4 160 9.34E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2229 82e8d1fac8883a8fa203cafa209b4aa6 265 Gene3D G3DSA:3.40.50.880 70 265 2.5E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2229 82e8d1fac8883a8fa203cafa209b4aa6 265 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 80 263 2.9E-42 T 14-10-2018 IPR006286 Deglycase PfpI VAB027_2229 82e8d1fac8883a8fa203cafa209b4aa6 265 SUPERFAMILY SSF52317 77 263 7.69E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VAB027_2229 82e8d1fac8883a8fa203cafa209b4aa6 265 Pfam PF01965 DJ-1/PfpI family 78 261 6.2E-43 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VAB027_3709 3a2acace4448d7e6bd563534d8d7e95a 174 SUPERFAMILY SSF52218 2 173 9.16E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_3709 3a2acace4448d7e6bd563534d8d7e95a 174 Pfam PF12724 Flavodoxin domain 4 152 3.0E-49 T 14-10-2018 IPR026816 Flavodoxin domain VAB027_3709 3a2acace4448d7e6bd563534d8d7e95a 174 Gene3D G3DSA:3.40.50.360 1 117 2.3E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_2029 89e21d11dd9ebef227244b1dfe13de0d 157 SUPERFAMILY SSF52833 1 156 5.47E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_2029 89e21d11dd9ebef227244b1dfe13de0d 157 Pfam PF08534 Redoxin 5 154 1.4E-39 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VAB027_2029 89e21d11dd9ebef227244b1dfe13de0d 157 Gene3D G3DSA:3.40.30.10 2 157 1.0E-60 T 14-10-2018 VAB027_3222 804b8c9c2167dafd1c53fcbfe31e07e0 113 SUPERFAMILY SSF89360 7 99 3.92E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAB027_3222 804b8c9c2167dafd1c53fcbfe31e07e0 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.616 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VAB027_3222 804b8c9c2167dafd1c53fcbfe31e07e0 113 Gene3D G3DSA:2.60.300.12 8 113 1.7E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAB027_3222 804b8c9c2167dafd1c53fcbfe31e07e0 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.4E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VAB027_3222 804b8c9c2167dafd1c53fcbfe31e07e0 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 3.0E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VAB027_3222 804b8c9c2167dafd1c53fcbfe31e07e0 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VAB027_823 008b62b5caead6613c1dd443fbf9a29c 284 Hamap MF_00790 Lipase chaperone [lifO]. 1 278 18.377 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VAB027_823 008b62b5caead6613c1dd443fbf9a29c 284 SUPERFAMILY SSF158855 31 281 3.79E-60 T 14-10-2018 VAB027_823 008b62b5caead6613c1dd443fbf9a29c 284 Pfam PF03280 Proteobacterial lipase chaperone protein 86 270 3.2E-42 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 SUPERFAMILY SSF50494 43 252 2.21E-61 T 14-10-2018 IPR009003 Peptidase S1, PA clan VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 SMART SM00228 255 337 8.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 Gene3D G3DSA:2.40.10.10 142 254 2.7E-36 T 14-10-2018 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 Pfam PF13365 Trypsin-like peptidase domain 80 214 5.8E-33 T 14-10-2018 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 Gene3D G3DSA:2.40.10.10 34 140 2.5E-32 T 14-10-2018 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 SUPERFAMILY SSF50156 238 345 8.57E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 1.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 1.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 1.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 PRINTS PR00834 HtrA/DegQ protease family signature 295 307 1.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 1.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 1.5E-45 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 Gene3D G3DSA:2.30.42.10 255 351 4.6E-22 T 14-10-2018 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 Pfam PF13180 PDZ domain 255 345 2.4E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VAB027_3277 9e993c62912ea52f4940f1b5a27eb33d 352 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 5.4E-183 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VAB027_2517 e36da27a8a8d98792fdff27ceec96383 644 SUPERFAMILY SSF52540 71 368 4.73E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_2517 e36da27a8a8d98792fdff27ceec96383 644 Pfam PF08298 PrkA AAA domain 20 380 1.8E-173 T 14-10-2018 IPR013153 PrkA AAA domain VAB027_2517 e36da27a8a8d98792fdff27ceec96383 644 PIRSF PIRSF000549 1 644 2.4E-286 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VAB027_2517 e36da27a8a8d98792fdff27ceec96383 644 SMART SM00763 19 380 1.5E-215 T 14-10-2018 IPR013153 PrkA AAA domain VAB027_2517 e36da27a8a8d98792fdff27ceec96383 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 6.0E-73 T 14-10-2018 IPR010650 PrkA C-terminal domain VAB027_3647 2d1e97accd2651f2a81cece6dd1ceb2c 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 61 1.6E-8 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 VAB027_3647 2d1e97accd2651f2a81cece6dd1ceb2c 63 Pfam PF12728 Helix-turn-helix domain 10 62 1.5E-10 T 14-10-2018 VAB027_3647 2d1e97accd2651f2a81cece6dd1ceb2c 63 SUPERFAMILY SSF46955 10 62 4.58E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_635 2ead6ebbc78b271e2a5f25dfa013bf82 320 Pfam PF03595 Voltage-dependent anion channel 11 303 7.5E-23 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VAB027_635 2ead6ebbc78b271e2a5f25dfa013bf82 320 Gene3D G3DSA:1.50.10.150 5 307 2.0E-32 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VAB027_1230 52f9d0f15dc222b32046d8e533253cd1 75 SUPERFAMILY SSF52096 1 68 3.13E-17 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAB027_1230 52f9d0f15dc222b32046d8e533253cd1 75 Gene3D G3DSA:3.90.226.10 1 71 2.5E-14 T 14-10-2018 VAB027_2394 198672ce70c87c64a321b1e234d84788 204 Gene3D G3DSA:1.20.120.260 80 202 4.5E-32 T 14-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily VAB027_2394 198672ce70c87c64a321b1e234d84788 204 SUPERFAMILY SSF47233 85 196 2.22E-19 T 14-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily VAB027_2394 198672ce70c87c64a321b1e234d84788 204 Pfam PF03545 Yersinia virulence determinant (YopE) 110 176 8.6E-14 T 14-10-2018 IPR014773 Virulence factor YopE, GAP domain VAB027_573 29ee881add7f9ab454b59c82efd72835 365 SUPERFAMILY SSF161098 129 346 3.4E-15 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_573 29ee881add7f9ab454b59c82efd72835 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 358 1.8E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_573 29ee881add7f9ab454b59c82efd72835 365 Gene3D G3DSA:1.10.3720.10 124 354 8.6E-20 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_978 886db1b0498bce77ca8d4e70c03181af 303 Pfam PF04018 Domain of unknown function (DUF368) 13 257 3.9E-97 T 14-10-2018 IPR007163 Protein of unknown function DUF368 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 Gene3D G3DSA:1.20.1080.10 3 260 1.7E-95 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 Pfam PF00230 Major intrinsic protein 5 252 5.3E-62 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.1E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.4E-67 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VAB027_432 e25ca0f056f2fa37f14cc5b8ee0ae89d 284 SUPERFAMILY SSF81338 9 256 8.37E-73 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAB027_2783 054053b7c1dd603bda13f368b4e9ce07 224 SUPERFAMILY SSF55166 17 174 9.68E-21 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAB027_2783 054053b7c1dd603bda13f368b4e9ce07 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 175 1.8E-35 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VAB027_2783 054053b7c1dd603bda13f368b4e9ce07 224 Gene3D G3DSA:3.30.1380.10 3 187 7.7E-35 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAB027_699 bcacf3029c994794d017308dc7fea279 99 Gene3D G3DSA:3.30.2310.20 1 96 2.7E-26 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_699 bcacf3029c994794d017308dc7fea279 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 2.3E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_699 bcacf3029c994794d017308dc7fea279 99 PIRSF PIRSF029218 1 97 4.3E-31 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 VAB027_2561 e318a44f38c5de4f988c6af880054f1c 103 SMART SM00278 51 70 13.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_2561 e318a44f38c5de4f988c6af880054f1c 103 SMART SM00278 81 100 4.6 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAB027_2561 e318a44f38c5de4f988c6af880054f1c 103 SUPERFAMILY SSF47781 28 102 2.56E-28 T 14-10-2018 IPR010994 RuvA domain 2-like VAB027_2561 e318a44f38c5de4f988c6af880054f1c 103 Gene3D G3DSA:1.10.150.280 29 103 1.3E-24 T 14-10-2018 VAB027_2561 e318a44f38c5de4f988c6af880054f1c 103 Pfam PF12836 Helix-hairpin-helix motif 41 101 4.5E-22 T 14-10-2018 VAB027_2561 e318a44f38c5de4f988c6af880054f1c 103 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 103 2.8E-26 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VAB027_660 a1bcec60f9ef209fa19db8b24e054af0 93 SUPERFAMILY SSF143120 10 81 6.67E-17 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_660 a1bcec60f9ef209fa19db8b24e054af0 93 Gene3D G3DSA:3.40.1620.40 12 74 9.7E-11 T 14-10-2018 VAB027_660 a1bcec60f9ef209fa19db8b24e054af0 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 8.9E-13 T 14-10-2018 VAB027_660 a1bcec60f9ef209fa19db8b24e054af0 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 1.5E-16 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_1865 86470fbdbe337d22b29658962090fe61 254 Pfam PF02698 DUF218 domain 72 208 1.1E-20 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VAB027_1598 713811db30079692533eb6ea8521e9e1 439 Pfam PF07157 DNA circularisation protein N-terminus 7 92 5.1E-28 T 14-10-2018 IPR009826 DNA circulation, N-terminal VAB027_1598 713811db30079692533eb6ea8521e9e1 439 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 5 134 2.0E-57 T 14-10-2018 IPR009826 DNA circulation, N-terminal VAB027_980 0938f1cacfd24e3405b1f312018f531c 193 Pfam PF02630 SCO1/SenC 51 174 4.6E-34 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_980 0938f1cacfd24e3405b1f312018f531c 193 SUPERFAMILY SSF52833 35 192 7.85E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_980 0938f1cacfd24e3405b1f312018f531c 193 Gene3D G3DSA:3.40.30.10 20 193 8.2E-40 T 14-10-2018 VAB027_3133 99617843e38d05f2ccc04869a3b8bd82 119 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 101 3.4E-17 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative VAB027_2912 7966a78e252e15dbffa09e5288256e3c 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.6E-72 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VAB027_2912 7966a78e252e15dbffa09e5288256e3c 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.301 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VAB027_2912 7966a78e252e15dbffa09e5288256e3c 149 Pfam PF03477 ATP cone domain 50 136 2.2E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VAB027_3759 50a2ca9d6883421b7d11f0786c55d26f 122 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 46 94 1.4E-18 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 VAB027_3759 50a2ca9d6883421b7d11f0786c55d26f 122 SUPERFAMILY SSF46955 46 107 4.03E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_3759 50a2ca9d6883421b7d11f0786c55d26f 122 Pfam PF12728 Helix-turn-helix domain 46 97 1.2E-12 T 14-10-2018 VAB027_1007 0fb53b5529944bff52b66dcfe15e46a7 726 SUPERFAMILY SSF51445 160 718 2.46E-149 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_1007 0fb53b5529944bff52b66dcfe15e46a7 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 1.2E-125 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VAB027_1007 0fb53b5529944bff52b66dcfe15e46a7 726 Gene3D G3DSA:3.20.20.80 173 717 1.7E-119 T 14-10-2018 VAB027_1007 0fb53b5529944bff52b66dcfe15e46a7 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 715 1.5E-194 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VAB027_69 dddc5dc4b9d6115f6c5b608e5321702b 175 SUPERFAMILY SSF47240 1 159 8.54E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily VAB027_69 dddc5dc4b9d6115f6c5b608e5321702b 175 Gene3D G3DSA:1.20.1260.10 1 175 3.2E-53 T 14-10-2018 IPR012347 Ferritin-like VAB027_69 dddc5dc4b9d6115f6c5b608e5321702b 175 Pfam PF00210 Ferritin-like domain 8 143 7.0E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VAB027_1947 23b125cfc3fa7b36ff20e3f37659a8b7 218 Gene3D G3DSA:3.60.15.10 3 213 2.0E-76 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_1947 23b125cfc3fa7b36ff20e3f37659a8b7 218 SUPERFAMILY SSF56281 4 211 6.5E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAB027_1947 23b125cfc3fa7b36ff20e3f37659a8b7 218 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 2.3E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_1947 23b125cfc3fa7b36ff20e3f37659a8b7 218 SMART SM00849 14 195 1.0E-38 T 14-10-2018 IPR001279 Metallo-beta-lactamase VAB027_1010 ccc612eff182d5b1e8b2ad7e5b663d24 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 9.2E-28 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 VAB027_1010 ccc612eff182d5b1e8b2ad7e5b663d24 118 Gene3D G3DSA:3.30.1370.150 58 118 4.7E-29 T 14-10-2018 VAB027_1166 4c84f723eaa323066eeaae3312e2608b 477 SUPERFAMILY SSF47413 18 58 2.37E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1166 4c84f723eaa323066eeaae3312e2608b 477 Gene3D G3DSA:1.10.260.40 1 66 6.8E-7 T 14-10-2018 VAB027_1166 4c84f723eaa323066eeaae3312e2608b 477 Pfam PF12268 Protein of unknown function (DUF3612) 299 473 2.9E-102 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 VAB027_1166 4c84f723eaa323066eeaae3312e2608b 477 Pfam PF01381 Helix-turn-helix 18 51 1.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAB027_921 183e1ac01b3356a3bb14e44029dd87a8 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 3.1E-181 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAB027_921 183e1ac01b3356a3bb14e44029dd87a8 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 490 4.3E-214 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAB027_2170 027a5a21fd6448f5d6cd3b4a86775424 232 Gene3D G3DSA:1.10.3720.10 1 229 4.8E-30 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2170 027a5a21fd6448f5d6cd3b4a86775424 232 SUPERFAMILY SSF161098 7 222 2.35E-32 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2170 027a5a21fd6448f5d6cd3b4a86775424 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 221 5.3E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 Pfam PF00696 Amino acid kinase family 2 211 5.9E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 SUPERFAMILY SSF55021 300 363 8.5E-5 T 14-10-2018 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 PIRSF PIRSF000726 1 44 7.6E-11 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 PIRSF PIRSF000726 40 366 5.0E-77 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 Gene3D G3DSA:3.30.70.260 292 368 1.8E-5 T 14-10-2018 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 Gene3D G3DSA:3.40.1160.10 1 238 4.0E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 41 359 3.2E-79 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAB027_3303 2f54832d1fe9c885d6c5ae318e812b16 375 SUPERFAMILY SSF53633 2 222 6.28E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAB027_1845 39b0d7af496dcdffadca0d48dca0c5ed 289 SUPERFAMILY SSF117396 6 266 2.62E-74 T 14-10-2018 IPR036520 UPF0759 superfamily VAB027_1845 39b0d7af496dcdffadca0d48dca0c5ed 289 Gene3D G3DSA:3.20.20.410 2 269 2.5E-45 T 14-10-2018 IPR036520 UPF0759 superfamily VAB027_1845 39b0d7af496dcdffadca0d48dca0c5ed 289 Pfam PF01904 Protein of unknown function DUF72 24 263 4.2E-56 T 14-10-2018 IPR002763 Protein of unknown function DUF72 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Gene3D G3DSA:1.10.287.470 112 160 3.2E-6 T 14-10-2018 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Gene3D G3DSA:2.40.30.170 68 77 3.2E-6 T 14-10-2018 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Gene3D G3DSA:1.10.287.470 231 304 3.7E-16 T 14-10-2018 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Gene3D G3DSA:2.40.30.170 342 430 3.7E-16 T 14-10-2018 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 37 453 1.5E-139 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Gene3D G3DSA:2.40.50.100 78 111 3.2E-6 T 14-10-2018 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 397 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 432 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 432 452 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 374 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 338 3.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Pfam PF13437 HlyD family secretion protein 305 420 4.0E-19 T 14-10-2018 VAB027_2120 6568c1a39ee1cae4443da0b139e02d4d 453 Gene3D G3DSA:2.40.50.100 305 341 3.7E-16 T 14-10-2018 VAB027_2147 b15bce63bc2725b568604cbeaccc8b6a 414 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 405 2.4E-104 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VAB027_2147 b15bce63bc2725b568604cbeaccc8b6a 414 Pfam PF04403 Paraquat-inducible protein A 252 406 9.9E-50 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VAB027_2147 b15bce63bc2725b568604cbeaccc8b6a 414 Pfam PF04403 Paraquat-inducible protein A 58 208 2.2E-38 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VAB027_3335 b4f87db505b1d44778677bbd5609e3ef 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 324 5.6E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VAB027_3335 b4f87db505b1d44778677bbd5609e3ef 359 Gene3D G3DSA:3.40.190.10 154 325 4.6E-117 T 14-10-2018 VAB027_3335 b4f87db505b1d44778677bbd5609e3ef 359 Gene3D G3DSA:3.40.190.170 37 346 4.6E-117 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VAB027_3335 b4f87db505b1d44778677bbd5609e3ef 359 PIRSF PIRSF039026 1 358 1.3E-131 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VAB027_2310 35e258f0c5afe3086de9308b6fccab46 147 Gene3D G3DSA:2.40.128.270 39 142 2.6E-30 T 14-10-2018 IPR038670 HslJ-like superfamily VAB027_2310 35e258f0c5afe3086de9308b6fccab46 147 Pfam PF03724 META domain 33 139 4.6E-28 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VAB027_576 1413336a8210752b7df93ff7d56182d7 130 Gene3D G3DSA:3.30.1330.80 1 130 1.4E-51 T 14-10-2018 VAB027_576 1413336a8210752b7df93ff7d56182d7 130 SUPERFAMILY SSF117856 4 129 1.23E-35 T 14-10-2018 VAB027_576 1413336a8210752b7df93ff7d56182d7 130 Pfam PF03479 Domain of unknown function (DUF296) 5 108 7.2E-24 T 14-10-2018 IPR005175 PPC domain VAB027_430 74ae38536e2fe2f9eb393ea19bb27ae1 436 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 1.0E-192 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAB027_430 74ae38536e2fe2f9eb393ea19bb27ae1 436 Pfam PF00890 FAD binding domain 5 410 4.9E-69 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_430 74ae38536e2fe2f9eb393ea19bb27ae1 436 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 426 50.682 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAB027_430 74ae38536e2fe2f9eb393ea19bb27ae1 436 SUPERFAMILY SSF51905 1 424 4.99E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_430 74ae38536e2fe2f9eb393ea19bb27ae1 436 PIRSF PIRSF000141 2 429 4.1E-185 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAB027_430 74ae38536e2fe2f9eb393ea19bb27ae1 436 Gene3D G3DSA:3.50.50.60 3 79 7.3E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_3617 b0db300aea2f210b9970a35fb8ce1f0d 426 Gene3D G3DSA:3.40.50.11720 33 210 5.8E-48 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VAB027_3617 b0db300aea2f210b9970a35fb8ce1f0d 426 Pfam PF00534 Glycosyl transferases group 1 243 400 5.2E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VAB027_3617 b0db300aea2f210b9970a35fb8ce1f0d 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 4.2E-63 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VAB027_3617 b0db300aea2f210b9970a35fb8ce1f0d 426 SUPERFAMILY SSF53756 53 404 1.32E-14 T 14-10-2018 VAB027_3617 b0db300aea2f210b9970a35fb8ce1f0d 426 Gene3D G3DSA:3.40.50.2000 218 405 2.0E-62 T 14-10-2018 VAB027_1520 d81601e47fd1843ee57fbf510b76ab9d 100 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 2.2E-30 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 VAB027_3643 b70cd3a49cb8c6bd34bfaf3114f8fefe 257 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 98 254 4.4E-52 T 14-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system VAB027_3643 b70cd3a49cb8c6bd34bfaf3114f8fefe 257 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 4 94 4.2E-32 T 14-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain VAB027_1247 1a194fa47cbd3674b342706c45f3ba72 565 Gene3D G3DSA:3.40.50.300 11 222 8.9E-43 T 14-10-2018 VAB027_1247 1a194fa47cbd3674b342706c45f3ba72 565 Gene3D G3DSA:3.30.420.240 338 546 2.1E-34 T 14-10-2018 VAB027_2920 c49c3f283b39fc15e3a98a0c50aeb490 147 SUPERFAMILY SSF50630 6 140 5.16E-46 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VAB027_2920 c49c3f283b39fc15e3a98a0c50aeb490 147 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 2.2E-51 T 14-10-2018 VAB027_2920 c49c3f283b39fc15e3a98a0c50aeb490 147 Gene3D G3DSA:2.40.70.10 3 133 4.2E-35 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VAB027_737 c98337a9c5d4b68f7d6d6b3522641c0c 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 72 6.4E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAB027_737 c98337a9c5d4b68f7d6d6b3522641c0c 82 SUPERFAMILY SSF143120 12 70 6.93E-7 T 14-10-2018 IPR036165 YefM-like superfamily VAB027_2397 b5419427a2ee1a7353c230b005e8c833 249 SUPERFAMILY SSF46894 20 97 7.94E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAB027_2397 b5419427a2ee1a7353c230b005e8c833 249 SMART SM00862 22 97 4.9E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2397 b5419427a2ee1a7353c230b005e8c833 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 96 3.6E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAB027_2397 b5419427a2ee1a7353c230b005e8c833 249 Gene3D G3DSA:1.10.10.10 10 103 2.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_612 af7e93a7e098f6fccba46098b40d2da7 360 Pfam PF02163 Peptidase family M50 227 262 4.9E-7 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VAB027_2108 abcb3099dc82d8836c251a5ea950f262 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 210 2.5E-56 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VAB027_779 bc3ecaf146b53b66c72dfd2d11c5d2af 239 SMART SM01057 23 239 5.4E-98 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain VAB027_779 bc3ecaf146b53b66c72dfd2d11c5d2af 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 236 5.5E-49 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain VAB027_779 bc3ecaf146b53b66c72dfd2d11c5d2af 239 SUPERFAMILY SSF51069 22 236 1.03E-73 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VAB027_779 bc3ecaf146b53b66c72dfd2d11c5d2af 239 Gene3D G3DSA:3.10.200.10 22 237 1.3E-80 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VAB027_779 bc3ecaf146b53b66c72dfd2d11c5d2af 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 14-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 VAB027_1079 fc082729b48d36be2aac011137d24d23 131 Pfam PF00581 Rhodanese-like domain 40 122 5.9E-9 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_1079 fc082729b48d36be2aac011137d24d23 131 Gene3D G3DSA:3.40.250.10 11 128 5.8E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_1079 fc082729b48d36be2aac011137d24d23 131 SUPERFAMILY SSF52821 27 130 5.5E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VAB027_1079 fc082729b48d36be2aac011137d24d23 131 SMART SM00450 29 127 8.5E-10 T 14-10-2018 IPR001763 Rhodanese-like domain VAB027_2019 3ff29fa7bb4ddfcd8d2422571b921502 158 Gene3D G3DSA:3.40.630.30 7 137 9.2E-34 T 14-10-2018 VAB027_2019 3ff29fa7bb4ddfcd8d2422571b921502 158 SUPERFAMILY SSF55729 4 148 6.93E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_2019 3ff29fa7bb4ddfcd8d2422571b921502 158 Pfam PF00583 Acetyltransferase (GNAT) family 26 146 2.4E-17 T 14-10-2018 IPR000182 GNAT domain VAB027_2474 722a21f0bd52c42374acbb95d0ffb0e3 190 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 179 1.6E-41 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAB027_2474 722a21f0bd52c42374acbb95d0ffb0e3 190 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 175 2.3E-41 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAB027_2474 722a21f0bd52c42374acbb95d0ffb0e3 190 SUPERFAMILY SSF101327 2 177 2.22E-34 T 14-10-2018 IPR036255 YgfB-like superfamily VAB027_3593 47d81ba6ce908a512e4077c378362d75 137 SUPERFAMILY SSF51161 2 110 6.93E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VAB027_3593 47d81ba6ce908a512e4077c378362d75 137 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 54 89 7.4E-11 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3593 47d81ba6ce908a512e4077c378362d75 137 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 32 2.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VAB027_3593 47d81ba6ce908a512e4077c378362d75 137 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 63 91 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAB027_3593 47d81ba6ce908a512e4077c378362d75 137 Gene3D G3DSA:2.160.10.10 1 127 5.7E-40 T 14-10-2018 VAB027_947 46bd5d8ee92a9a9388d4c54b85c1a6b1 407 Gene3D G3DSA:2.70.70.10 243 373 1.8E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_947 46bd5d8ee92a9a9388d4c54b85c1a6b1 407 SUPERFAMILY SSF51261 122 368 3.61E-70 T 14-10-2018 IPR011055 Duplicated hybrid motif VAB027_947 46bd5d8ee92a9a9388d4c54b85c1a6b1 407 Gene3D G3DSA:3.10.450.350 138 242 2.8E-34 T 14-10-2018 VAB027_947 46bd5d8ee92a9a9388d4c54b85c1a6b1 407 Pfam PF04225 Opacity-associated protein A LysM-like domain 52 132 5.3E-7 T 14-10-2018 IPR007340 Opacity-associated protein A VAB027_947 46bd5d8ee92a9a9388d4c54b85c1a6b1 407 Pfam PF01551 Peptidase family M23 273 366 4.5E-33 T 14-10-2018 IPR016047 Peptidase M23 VAB027_947 46bd5d8ee92a9a9388d4c54b85c1a6b1 407 Gene3D G3DSA:3.10.450.350 45 137 1.6E-31 T 14-10-2018 VAB027_167 e553a77e033f3d1cad01024d34595bda 336 SUPERFAMILY SSF54523 36 325 9.89E-38 T 14-10-2018 VAB027_167 e553a77e033f3d1cad01024d34595bda 336 Gene3D G3DSA:1.10.40.60 216 285 1.4E-91 T 14-10-2018 IPR038072 GspK, central domain superfamily VAB027_167 e553a77e033f3d1cad01024d34595bda 336 SUPERFAMILY SSF158544 101 213 1.54E-28 T 14-10-2018 IPR038072 GspK, central domain superfamily VAB027_167 e553a77e033f3d1cad01024d34595bda 336 SUPERFAMILY SSF158544 215 284 1.1E-19 T 14-10-2018 IPR038072 GspK, central domain superfamily VAB027_167 e553a77e033f3d1cad01024d34595bda 336 Gene3D G3DSA:3.30.1300.30 42 309 1.4E-91 T 14-10-2018 VAB027_167 e553a77e033f3d1cad01024d34595bda 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 4.3E-89 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VAB027_167 e553a77e033f3d1cad01024d34595bda 336 PIRSF PIRSF002786 1 328 3.9E-64 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VAB027_167 e553a77e033f3d1cad01024d34595bda 336 Gene3D G3DSA:1.10.40.60 99 215 1.4E-91 T 14-10-2018 IPR038072 GspK, central domain superfamily VAB027_1574 9da7767107a7169422441188da147cad 138 Pfam PF08765 Mor transcription activator family 36 137 7.2E-26 T 14-10-2018 IPR014875 Mor transcription activator VAB027_1574 9da7767107a7169422441188da147cad 138 Gene3D G3DSA:1.10.10.60 82 138 6.0E-25 T 14-10-2018 VAB027_1574 9da7767107a7169422441188da147cad 138 SUPERFAMILY SSF46689 36 127 1.18E-22 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1385 36a75c6bdbd44cc1382eea106ecd641f 731 SUPERFAMILY SSF50969 85 396 1.02E-7 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VAB027_1385 36a75c6bdbd44cc1382eea106ecd641f 731 SUPERFAMILY SSF161098 427 667 9.0E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1385 36a75c6bdbd44cc1382eea106ecd641f 731 Gene3D G3DSA:1.10.3720.10 510 728 2.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1385 36a75c6bdbd44cc1382eea106ecd641f 731 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 449 725 6.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_2113 51b1957681c042f3a5ca90e4cf021736 54 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 4.5E-15 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VAB027_2850 04ad64f0b4f99a1abe5297e80008f627 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 300 375 7.6E-27 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VAB027_2850 04ad64f0b4f99a1abe5297e80008f627 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 1.3E-24 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VAB027_2850 04ad64f0b4f99a1abe5297e80008f627 377 Gene3D G3DSA:2.40.10.410 291 377 8.8E-34 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily VAB027_2850 04ad64f0b4f99a1abe5297e80008f627 377 Gene3D G3DSA:3.30.1660.40 24 113 3.5E-33 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily VAB027_2850 04ad64f0b4f99a1abe5297e80008f627 377 Gene3D G3DSA:3.40.50.10610 114 290 3.9E-53 T 14-10-2018 VAB027_2850 04ad64f0b4f99a1abe5297e80008f627 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 6.6E-43 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain VAB027_2347 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 Gene3D G3DSA:3.10.129.10 1 138 4.2E-40 T 14-10-2018 VAB027_2347 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 Pfam PF03061 Thioesterase superfamily 26 98 6.9E-20 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAB027_2347 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 SUPERFAMILY SSF54637 9 129 2.96E-38 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_956 829df790ffc8bbb5b0801d5bfe7bfa93 273 Pfam PF12849 PBP superfamily domain 24 258 1.1E-42 T 14-10-2018 IPR024370 PBP domain VAB027_956 829df790ffc8bbb5b0801d5bfe7bfa93 273 Gene3D G3DSA:3.40.190.10 99 233 3.4E-85 T 14-10-2018 VAB027_956 829df790ffc8bbb5b0801d5bfe7bfa93 273 Gene3D G3DSA:3.40.190.10 30 270 3.4E-85 T 14-10-2018 VAB027_956 829df790ffc8bbb5b0801d5bfe7bfa93 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 271 7.5E-78 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VAB027_956 829df790ffc8bbb5b0801d5bfe7bfa93 273 SUPERFAMILY SSF53850 16 272 2.32E-74 T 14-10-2018 VAB027_1210 e098cc76cfc311da11d00dc32d1e7e2b 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.2E-90 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VAB027_1210 e098cc76cfc311da11d00dc32d1e7e2b 176 Gene3D G3DSA:2.30.110.10 11 175 2.4E-55 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAB027_1210 e098cc76cfc311da11d00dc32d1e7e2b 176 PIRSF PIRSF004633 1 176 2.3E-79 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VAB027_1210 e098cc76cfc311da11d00dc32d1e7e2b 176 SUPERFAMILY SSF50475 12 162 3.55E-34 T 14-10-2018 VAB027_1210 e098cc76cfc311da11d00dc32d1e7e2b 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 2.5E-17 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAB027_860 163857dc37fe2f4c97428255224fe94e 217 SUPERFAMILY SSF52833 3 211 3.08E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_860 163857dc37fe2f4c97428255224fe94e 217 Gene3D G3DSA:3.40.30.10 1 209 8.6E-64 T 14-10-2018 VAB027_860 163857dc37fe2f4c97428255224fe94e 217 Pfam PF01323 DSBA-like thioredoxin domain 5 207 3.0E-36 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VAB027_2947 b20dc424377bde5ecc85cba7d2a9d7bb 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 140 1.1E-43 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VAB027_2947 b20dc424377bde5ecc85cba7d2a9d7bb 143 Gene3D G3DSA:3.90.1010.10 1 143 3.7E-49 T 14-10-2018 VAB027_2947 b20dc424377bde5ecc85cba7d2a9d7bb 143 Pfam PF02657 Fe-S metabolism associated domain 20 139 3.2E-45 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VAB027_2947 b20dc424377bde5ecc85cba7d2a9d7bb 143 SUPERFAMILY SSF82649 3 142 8.37E-48 T 14-10-2018 VAB027_2348 93a8599b9901c19d9de98b1c0020898f 98 SUPERFAMILY SSF54909 1 98 4.56E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VAB027_2348 93a8599b9901c19d9de98b1c0020898f 98 Gene3D G3DSA:3.30.70.1060 1 98 1.3E-38 T 14-10-2018 VAB027_2348 93a8599b9901c19d9de98b1c0020898f 98 Pfam PF03795 YCII-related domain 1 95 4.6E-31 T 14-10-2018 IPR005545 YCII-related VAB027_2032 fff9fbb11c484b846042b79bb797a817 91 Pfam PF00708 Acylphosphatase 7 90 6.9E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAB027_2032 fff9fbb11c484b846042b79bb797a817 91 SUPERFAMILY SSF54975 3 90 5.45E-26 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAB027_2032 fff9fbb11c484b846042b79bb797a817 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAB027_2032 fff9fbb11c484b846042b79bb797a817 91 Gene3D G3DSA:3.30.70.100 1 91 1.4E-32 T 14-10-2018 VAB027_2032 fff9fbb11c484b846042b79bb797a817 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAB027_3136 009ade6a7f675ebc766bdf1fec6de405 106 SUPERFAMILY SSF46689 38 104 7.53E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_3136 009ade6a7f675ebc766bdf1fec6de405 106 Pfam PF08765 Mor transcription activator family 30 104 5.8E-12 T 14-10-2018 IPR014875 Mor transcription activator VAB027_54 610ccbf4a4f29f8691bfb6c38a7c490b 442 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 217 405 6.9E-46 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAB027_54 610ccbf4a4f29f8691bfb6c38a7c490b 442 Gene3D G3DSA:3.20.20.70 197 413 1.7E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_54 610ccbf4a4f29f8691bfb6c38a7c490b 442 Pfam PF02581 Thiamine monophosphate synthase 216 393 3.1E-51 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAB027_54 610ccbf4a4f29f8691bfb6c38a7c490b 442 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 197 411 19.527 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAB027_54 610ccbf4a4f29f8691bfb6c38a7c490b 442 SUPERFAMILY SSF51391 207 410 2.22E-60 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 Gene3D G3DSA:3.30.930.10 157 510 1.1E-130 T 14-10-2018 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 2.0E-200 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.168 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 SUPERFAMILY SSF50249 16 154 8.08E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 144 1.9E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 SUPERFAMILY SSF55681 161 507 2.21E-118 T 14-10-2018 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 Gene3D G3DSA:2.40.50.140 9 156 1.7E-29 T 14-10-2018 VAB027_3181 c53fcb49c777baf118f9aa2b9a2c40b0 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 4.4E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAB027_846 ea3e2de853e85a11257bfb871c135eea 427 Pfam PF03553 Na+/H+ antiporter family 37 200 1.4E-14 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAB027_318 0f9084fbe995e75e4bffa8e36101ff9a 339 Pfam PF08206 Ribonuclease B OB domain 88 145 2.2E-14 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VAB027_318 0f9084fbe995e75e4bffa8e36101ff9a 339 SUPERFAMILY SSF50249 68 148 2.03E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_318 0f9084fbe995e75e4bffa8e36101ff9a 339 SUPERFAMILY SSF50249 189 287 2.16E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAB027_318 0f9084fbe995e75e4bffa8e36101ff9a 339 Gene3D G3DSA:2.40.50.140 71 149 4.6E-14 T 14-10-2018 VAB027_318 0f9084fbe995e75e4bffa8e36101ff9a 339 SMART SM00357 87 146 0.0028 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VAB027_1697 3ec48207be19b5799ecdc59e133060aa 209 SMART SM00900 100 192 2.0E-36 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAB027_1697 3ec48207be19b5799ecdc59e133060aa 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.667 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VAB027_1697 3ec48207be19b5799ecdc59e133060aa 209 Pfam PF04205 FMN-binding domain 100 189 1.7E-20 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAB027_1697 3ec48207be19b5799ecdc59e133060aa 209 PIRSF PIRSF006091 1 206 4.4E-82 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VAB027_1697 3ec48207be19b5799ecdc59e133060aa 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.5E-73 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VAB027_3588 5ec62da7a442addb232108176d8e27be 303 Gene3D G3DSA:3.40.50.720 1 300 2.6E-59 T 14-10-2018 VAB027_3588 5ec62da7a442addb232108176d8e27be 303 SUPERFAMILY SSF51735 1 296 4.31E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_3588 5ec62da7a442addb232108176d8e27be 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 213 6.9E-30 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAB027_2337 a2b487658f103094fc512d832b236058 578 SUPERFAMILY SSF51445 190 530 2.45E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_2337 a2b487658f103094fc512d832b236058 578 Gene3D G3DSA:3.20.20.70 187 494 1.0E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_2337 a2b487658f103094fc512d832b236058 578 Pfam PF02065 Melibiase 168 351 4.3E-17 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VAB027_2388 98b2b4baa04f7aec155900ef64782663 192 Gene3D G3DSA:3.40.50.10610 18 191 3.9E-18 T 14-10-2018 VAB027_2388 98b2b4baa04f7aec155900ef64782663 192 SUPERFAMILY SSF159594 25 190 1.8E-34 T 14-10-2018 VAB027_2388 98b2b4baa04f7aec155900ef64782663 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 27 185 1.6E-41 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component VAB027_1491 ba23ba1dd12ea29020e2674bb79fe67f 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 8.1E-32 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VAB027_1491 ba23ba1dd12ea29020e2674bb79fe67f 144 Gene3D G3DSA:3.30.530.20 1 144 3.2E-39 T 14-10-2018 IPR023393 START-like domain superfamily VAB027_1491 ba23ba1dd12ea29020e2674bb79fe67f 144 SUPERFAMILY SSF55961 1 143 1.94E-34 T 14-10-2018 VAB027_2668 a6a65c125d8970deb4cc9472b992b8ec 519 SUPERFAMILY SSF52091 415 497 1.16E-10 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_2668 a6a65c125d8970deb4cc9472b992b8ec 519 Pfam PF00916 Sulfate permease family 13 374 1.7E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAB027_2668 a6a65c125d8970deb4cc9472b992b8ec 519 Gene3D G3DSA:3.30.750.24 409 499 7.2E-27 T 14-10-2018 IPR036513 STAS domain superfamily VAB027_2668 a6a65c125d8970deb4cc9472b992b8ec 519 Pfam PF01740 STAS domain 415 509 4.2E-6 T 14-10-2018 IPR002645 STAS domain VAB027_3195 00d299b6fcf28b1c2edf93dbced995e9 292 Pfam PF01136 Peptidase family U32 82 237 3.1E-13 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAB027_3478 35a728ffc2963322f78cc2db9c135fdd 259 Gene3D G3DSA:3.10.50.40 145 258 7.2E-43 T 14-10-2018 VAB027_3478 35a728ffc2963322f78cc2db9c135fdd 259 Gene3D G3DSA:1.10.287.460 30 144 1.2E-33 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VAB027_3478 35a728ffc2963322f78cc2db9c135fdd 259 SUPERFAMILY SSF54534 46 251 7.69E-64 T 14-10-2018 VAB027_3478 35a728ffc2963322f78cc2db9c135fdd 259 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 249 5.0E-30 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAB027_3478 35a728ffc2963322f78cc2db9c135fdd 259 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 155 1.5E-34 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VAB027_98 52431806c07d7fc5eb8d2c0b92ee7eb8 182 Pfam PF04220 Der GTPase activator (YihI) 21 172 1.0E-44 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VAB027_98 52431806c07d7fc5eb8d2c0b92ee7eb8 182 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 175 16.381 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VAB027_3272 de8d52f4b6d11b1db6381760fadb44c8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.3E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VAB027_3272 de8d52f4b6d11b1db6381760fadb44c8 130 Gene3D G3DSA:3.30.230.10 1 130 4.1E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAB027_3272 de8d52f4b6d11b1db6381760fadb44c8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.585 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VAB027_3272 de8d52f4b6d11b1db6381760fadb44c8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VAB027_3272 de8d52f4b6d11b1db6381760fadb44c8 130 SUPERFAMILY SSF54211 5 130 2.31E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAB027_1641 01a55092e574bd9bbf90fcb28adc45aa 156 PIRSF PIRSF004505 1 155 1.9E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAB027_1641 01a55092e574bd9bbf90fcb28adc45aa 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.8E-77 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAB027_1641 01a55092e574bd9bbf90fcb28adc45aa 156 SUPERFAMILY SSF75217 2 154 2.46E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VAB027_1641 01a55092e574bd9bbf90fcb28adc45aa 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.697 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAB027_1641 01a55092e574bd9bbf90fcb28adc45aa 156 Gene3D G3DSA:3.40.1280.10 1 156 6.4E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAB027_1641 01a55092e574bd9bbf90fcb28adc45aa 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.3E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAB027_1804 19dad0e7c3a006909c225858bbf7c0d3 179 Pfam PF11086 Protein of unknown function (DUF2878) 6 150 6.5E-32 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 VAB027_1762 4711bebb04ee434f68b6c24209970c60 121 SUPERFAMILY SSF47226 11 109 1.02E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_1762 4711bebb04ee434f68b6c24209970c60 121 Pfam PF01627 Hpt domain 24 101 2.8E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAB027_1762 4711bebb04ee434f68b6c24209970c60 121 Gene3D G3DSA:1.20.120.160 2 118 3.6E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAB027_2577 f091383cefb6b850c9342d9aca63f0b3 230 Gene3D G3DSA:1.20.120.1760 17 219 2.1E-27 T 14-10-2018 VAB027_2577 f091383cefb6b850c9342d9aca63f0b3 230 Pfam PF01066 CDP-alcohol phosphatidyltransferase 35 105 2.0E-8 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAB027_935 f100a7f4e63354e48132b15306da3dbd 209 SUPERFAMILY SSF53474 3 177 1.89E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_3060 42db0f0c8bceea6eb7ef8cfd934b9077 148 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.7E-41 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 VAB027_2962 3f45a4c6ac6ac2dbce0fae7af7dd6c17 363 Gene3D G3DSA:3.40.630.30 1 153 6.0E-32 T 14-10-2018 VAB027_2962 3f45a4c6ac6ac2dbce0fae7af7dd6c17 363 Pfam PF11814 Peptidase_C39 like family 157 359 1.5E-77 T 14-10-2018 IPR021770 Protein of unknown function DUF3335 VAB027_2962 3f45a4c6ac6ac2dbce0fae7af7dd6c17 363 Pfam PF00583 Acetyltransferase (GNAT) family 33 123 4.8E-18 T 14-10-2018 IPR000182 GNAT domain VAB027_2962 3f45a4c6ac6ac2dbce0fae7af7dd6c17 363 SUPERFAMILY SSF55729 1 147 1.16E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_622 68b8ef52449bf274b0c3f4bcfaa1e805 181 SUPERFAMILY SSF81342 7 179 5.1E-36 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAB027_622 68b8ef52449bf274b0c3f4bcfaa1e805 181 Pfam PF01292 Prokaryotic cytochrome b561 8 178 4.9E-30 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAB027_925 f216e4011ecc1cdfb4a0947ffb1e2e31 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 3.2E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_925 f216e4011ecc1cdfb4a0947ffb1e2e31 559 SUPERFAMILY SSF55120 352 556 5.92E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_925 f216e4011ecc1cdfb4a0947ffb1e2e31 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_925 f216e4011ecc1cdfb4a0947ffb1e2e31 559 Gene3D G3DSA:3.30.2350.10 347 559 1.5E-62 T 14-10-2018 VAB027_3052 50b9f25d44330379f9ef9d632d051794 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 2.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAB027_3052 50b9f25d44330379f9ef9d632d051794 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 2.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAB027_3052 50b9f25d44330379f9ef9d632d051794 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 2.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAB027_3052 50b9f25d44330379f9ef9d632d051794 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 2.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAB027_3052 50b9f25d44330379f9ef9d632d051794 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 3.3E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal VAB027_3052 50b9f25d44330379f9ef9d632d051794 291 Pfam PF01478 Type IV leader peptidase family 135 244 1.8E-26 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VAB027_3267 8184b1e96eaac2b2103911a087ed8c56 154 SUPERFAMILY SSF101738 5 111 1.11E-47 T 14-10-2018 IPR036760 SspB-like superfamily VAB027_3267 8184b1e96eaac2b2103911a087ed8c56 154 Gene3D G3DSA:2.30.30.220 3 130 1.3E-50 T 14-10-2018 IPR036760 SspB-like superfamily VAB027_3267 8184b1e96eaac2b2103911a087ed8c56 154 Pfam PF04386 Stringent starvation protein B 9 154 7.9E-39 T 14-10-2018 IPR007481 Stringent starvation protein B VAB027_3267 8184b1e96eaac2b2103911a087ed8c56 154 PIRSF PIRSF005276 3 154 1.4E-60 T 14-10-2018 IPR007481 Stringent starvation protein B VAB027_2560 1b7f222c3b1d15872acf903dc22c9738 225 Gene3D G3DSA:3.40.50.300 1 225 1.3E-83 T 14-10-2018 VAB027_2560 1b7f222c3b1d15872acf903dc22c9738 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.793 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VAB027_2560 1b7f222c3b1d15872acf903dc22c9738 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.2E-86 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VAB027_2560 1b7f222c3b1d15872acf903dc22c9738 225 Pfam PF02224 Cytidylate kinase 8 221 1.9E-79 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VAB027_2560 1b7f222c3b1d15872acf903dc22c9738 225 SUPERFAMILY SSF52540 6 223 3.07E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_485 a0de9ee01bfcfa6adccbc2e763bcdd54 115 Pfam PF09361 Phasin protein 8 108 3.8E-22 T 14-10-2018 IPR018968 Phasin VAB027_485 a0de9ee01bfcfa6adccbc2e763bcdd54 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.5E-59 T 14-10-2018 IPR014176 Phasin, subfamily 3 VAB027_485 a0de9ee01bfcfa6adccbc2e763bcdd54 115 PIRSF PIRSF028226 1 115 1.5E-59 T 14-10-2018 IPR014176 Phasin, subfamily 3 VAB027_3427 c47227d47894c8ae1caed9b6588bbca9 383 SMART SM00028 192 225 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3427 c47227d47894c8ae1caed9b6588bbca9 383 SMART SM00028 292 325 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3427 c47227d47894c8ae1caed9b6588bbca9 383 SMART SM00028 226 259 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAB027_3427 c47227d47894c8ae1caed9b6588bbca9 383 Gene3D G3DSA:1.25.40.10 177 290 8.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3427 c47227d47894c8ae1caed9b6588bbca9 383 Gene3D G3DSA:1.25.40.10 291 383 8.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_3427 c47227d47894c8ae1caed9b6588bbca9 383 SUPERFAMILY SSF48452 192 354 1.52E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_7 887a6df0ca5a13bdacf9dca8fd08c69c 145 SUPERFAMILY SSF49764 6 138 2.93E-23 T 14-10-2018 IPR008978 HSP20-like chaperone VAB027_7 887a6df0ca5a13bdacf9dca8fd08c69c 145 Gene3D G3DSA:2.60.40.790 34 137 1.0E-23 T 14-10-2018 IPR008978 HSP20-like chaperone VAB027_7 887a6df0ca5a13bdacf9dca8fd08c69c 145 Pfam PF00011 Hsp20/alpha crystallin family 43 137 3.1E-20 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VAB027_856 85481b56455857b5a06397f0cfa76595 291 Pfam PF00924 Mechanosensitive ion channel 58 180 3.8E-16 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAB027_856 85481b56455857b5a06397f0cfa76595 291 SUPERFAMILY SSF50182 96 169 2.26E-10 T 14-10-2018 IPR010920 LSM domain superfamily VAB027_914 4763dfd12c8b2d99ae416e851bc08264 257 Pfam PF09850 Type VI secretion system protein DotU 39 240 1.0E-62 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VAB027_914 4763dfd12c8b2d99ae416e851bc08264 257 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 37 246 1.4E-70 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VAB027_914 4763dfd12c8b2d99ae416e851bc08264 257 Gene3D G3DSA:1.25.40.590 34 193 4.8E-62 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VAB027_73 c9726f565d16d2b5bcb859a77cea6501 510 Pfam PF02646 RmuC family 181 477 3.0E-105 T 14-10-2018 IPR003798 DNA recombination RmuC VAB027_1783 33fbbb4cd5aa72e98ae980ad1d8c7423 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 2.3E-27 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAB027_1636 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 25.9 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VAB027_1636 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Gene3D G3DSA:3.30.70.260 6 92 2.5E-33 T 14-10-2018 VAB027_1636 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.2E-29 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VAB027_1636 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 SUPERFAMILY SSF117991 7 92 1.7E-30 T 14-10-2018 IPR027471 YbeD-like domain superfamily VAB027_1222 5b4b125262717503f5579dc20afc6922 127 Gene3D G3DSA:1.20.120.10 21 117 3.9E-8 T 14-10-2018 VAB027_1222 5b4b125262717503f5579dc20afc6922 127 SUPERFAMILY SSF47175 22 117 4.12E-28 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VAB027_1222 5b4b125262717503f5579dc20afc6922 127 Pfam PF07361 Cytochrome b562 22 117 1.2E-26 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VAB027_3420 a3efb560c6fdf6d0226cf9e2292662ee 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 5.2E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3420 a3efb560c6fdf6d0226cf9e2292662ee 170 Gene3D G3DSA:3.30.700.10 16 165 2.6E-9 T 14-10-2018 VAB027_3420 a3efb560c6fdf6d0226cf9e2292662ee 170 SUPERFAMILY SSF54523 16 134 8.63E-13 T 14-10-2018 VAB027_3420 a3efb560c6fdf6d0226cf9e2292662ee 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 7.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1530 6533724887dec4df87c021263bd8d182 318 Gene3D G3DSA:3.30.1330.60 153 301 1.8E-49 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_1530 6533724887dec4df87c021263bd8d182 318 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 57 9.3E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain VAB027_1530 6533724887dec4df87c021263bd8d182 318 SUPERFAMILY SSF103088 183 299 6.02E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily VAB027_1530 6533724887dec4df87c021263bd8d182 318 Pfam PF00691 OmpA family 195 293 8.3E-16 T 14-10-2018 IPR006665 OmpA-like domain VAB027_2997 56ef73cb745c796b5a2c5b08e1822492 127 Pfam PF11697 Protein of unknown function (DUF3293) 31 100 1.0E-18 T 14-10-2018 IPR021710 Protein of unknown function DUF3293 VAB027_696 16776bb7236dc80f40d570f61f36a678 128 Pfam PF00293 NUDIX domain 1 120 1.6E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_696 16776bb7236dc80f40d570f61f36a678 128 SUPERFAMILY SSF55811 5 122 3.79E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_696 16776bb7236dc80f40d570f61f36a678 128 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_696 16776bb7236dc80f40d570f61f36a678 128 PRINTS PR00502 NUDIX hydrolase family signature 29 43 1.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_696 16776bb7236dc80f40d570f61f36a678 128 PRINTS PR00502 NUDIX hydrolase family signature 43 58 1.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_696 16776bb7236dc80f40d570f61f36a678 128 Gene3D G3DSA:3.90.79.10 1 127 6.1E-21 T 14-10-2018 VAB027_742 42140d4c9dfd797f332054b07fb3dcdb 73 Pfam PF06945 Protein of unknown function (DUF1289) 20 63 2.1E-17 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VAB027_715 42140d4c9dfd797f332054b07fb3dcdb 73 Pfam PF06945 Protein of unknown function (DUF1289) 20 63 2.1E-17 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 Gene3D G3DSA:3.40.50.150 8 181 1.4E-52 T 14-10-2018 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 Gene3D G3DSA:3.40.50.150 186 376 6.1E-45 T 14-10-2018 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 375 49.081 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 PIRSF PIRSF037565 1 376 1.2E-171 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 Pfam PF05175 Methyltransferase small domain 200 372 2.0E-52 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAB027_2936 a64898b8f7ea44c103dcf93120d9b6b1 376 SUPERFAMILY SSF53335 197 353 2.04E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_2386 d631bdd3b930a6e9305375053a8ee36e 413 Pfam PF04403 Paraquat-inducible protein A 247 405 4.7E-54 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VAB027_2386 d631bdd3b930a6e9305375053a8ee36e 413 Pfam PF04403 Paraquat-inducible protein A 31 191 1.5E-37 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VAB027_2386 d631bdd3b930a6e9305375053a8ee36e 413 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 3 404 1.7E-98 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VAB027_3366 2deaff4648be8b8e2b211eaacf765d26 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 1.6E-47 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 VAB027_3366 2deaff4648be8b8e2b211eaacf765d26 143 Gene3D G3DSA:2.60.40.3340 14 143 1.2E-39 T 14-10-2018 VAB027_460 e5fd52ac632cb46b7f1e82f6c8486980 181 Gene3D G3DSA:3.90.1520.10 1 180 1.0E-61 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VAB027_460 e5fd52ac632cb46b7f1e82f6c8486980 181 SUPERFAMILY SSF111126 1 178 6.1E-51 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VAB027_460 e5fd52ac632cb46b7f1e82f6c8486980 181 SMART SM00989 118 178 8.8E-10 T 14-10-2018 IPR004096 4-vinyl reductase, 4VR VAB027_460 e5fd52ac632cb46b7f1e82f6c8486980 181 Pfam PF07700 Haem-NO-binding 3 160 3.8E-37 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VAB027_1600 6db6d2936066398714debe9a488ee47d 201 PIRSF PIRSF012337 1 200 5.4E-56 T 14-10-2018 IPR014462 Phage-associated protein Gp45 VAB027_1600 6db6d2936066398714debe9a488ee47d 201 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 187 9.6E-38 T 14-10-2018 IPR014462 Phage-associated protein Gp45 VAB027_1600 6db6d2936066398714debe9a488ee47d 201 Gene3D G3DSA:2.20.25.540 88 140 2.0E-15 T 14-10-2018 VAB027_1600 6db6d2936066398714debe9a488ee47d 201 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 14 192 1.6E-25 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 VAB027_923 a85e541310fb18bef8d7b5e37e3637f1 334 Gene3D G3DSA:1.25.40.10 22 324 3.8E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_923 a85e541310fb18bef8d7b5e37e3637f1 334 SUPERFAMILY SSF81901 126 288 2.09E-14 T 14-10-2018 VAB027_1164 17319e25913d926249990328ee4e9e24 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 199 3.2E-38 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VAB027_1164 17319e25913d926249990328ee4e9e24 202 SUPERFAMILY SSF51197 9 201 6.87E-67 T 14-10-2018 VAB027_1164 17319e25913d926249990328ee4e9e24 202 Gene3D G3DSA:2.60.120.590 9 202 1.0E-68 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily VAB027_2126 0dd32906b5677cfebfe20acc7c68dcdb 105 Pfam PF12321 Protein of unknown function (DUF3634) 2 102 3.8E-42 T 14-10-2018 IPR022090 Protein of unknown function DUF3634 VAB027_2228 ab19fa169d6440b9aae333844ff333e2 133 Gene3D G3DSA:1.10.3990.20 8 116 5.7E-35 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily VAB027_2228 ab19fa169d6440b9aae333844ff333e2 133 Pfam PF13467 Ribbon-helix-helix domain 16 83 2.4E-23 T 14-10-2018 IPR027373 Ribbon-helix-helix domain VAB027_2571 225e842cd73fc57aef0b8f0b058e0e47 220 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.6E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VAB027_1251 ffeabb676625d104f97d2e73924b8e2b 241 Pfam PF01609 Transposase DDE domain 48 227 1.4E-22 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 7.9E-261 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 7.4E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.6E-127 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 Pfam PF01578 Cytochrome C assembly protein 89 297 1.5E-55 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_2690 a1a2e3ff555ad90e6ddcef392923011b 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.8E-94 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAB027_1870 dd60e60fa6e681325e596220a73f2204 132 Gene3D G3DSA:3.40.50.300 19 126 9.6E-12 T 14-10-2018 VAB027_1870 dd60e60fa6e681325e596220a73f2204 132 SUPERFAMILY SSF52540 28 125 9.03E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1464 3f837700bb21829eb7432be3672b6404 453 Pfam PF07804 HipA-like C-terminal domain 166 385 1.7E-22 T 14-10-2018 IPR012893 HipA-like, C-terminal VAB027_1464 3f837700bb21829eb7432be3672b6404 453 PIRSF PIRSF028135 1 453 1.6E-241 T 14-10-2018 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like VAB027_2006 a2793a7a66d15255a934a729c588f049 330 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 7.6E-31 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VAB027_1129 9d8ab9abb2d808df33924ec6a790b45e 347 Gene3D G3DSA:3.20.20.70 1 347 2.8E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAB027_1129 9d8ab9abb2d808df33924ec6a790b45e 347 SUPERFAMILY SSF51395 3 338 1.22E-104 T 14-10-2018 VAB027_1129 9d8ab9abb2d808df33924ec6a790b45e 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 1.6E-83 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VAB027_1421 9071c80a3fe487f03107437df1a517a2 446 Pfam PF02601 Exonuclease VII, large subunit 127 440 1.7E-103 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VAB027_1421 9071c80a3fe487f03107437df1a517a2 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 1.5E-138 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VAB027_1421 9071c80a3fe487f03107437df1a517a2 446 Pfam PF13742 OB-fold nucleic acid binding domain 11 104 2.2E-29 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VAB027_1421 9071c80a3fe487f03107437df1a517a2 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 444 31.971 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VAB027_190 a35cdb6d0273dfba0474aac8a1c5f148 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.9E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VAB027_190 a35cdb6d0273dfba0474aac8a1c5f148 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.3E-34 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VAB027_1587 10ebd1a66b7da95ee42937a4490d84d6 167 Pfam PF10123 Mu-like prophage I protein 7 158 3.0E-19 T 14-10-2018 IPR012106 Protease, Mu phage/prophage I type VAB027_1701 17da202ff9891eb10b5620fc9aac2d63 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.3E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_1701 17da202ff9891eb10b5620fc9aac2d63 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.338 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VAB027_1701 17da202ff9891eb10b5620fc9aac2d63 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-90 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VAB027_1701 17da202ff9891eb10b5620fc9aac2d63 193 PIRSF PIRSF006102 1 193 1.9E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAB027_1362 cd5646d9983f9da15479e656f24176a5 149 Gene3D G3DSA:3.40.50.10110 1 146 4.0E-41 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VAB027_1362 cd5646d9983f9da15479e656f24176a5 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 2.1E-31 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VAB027_1362 cd5646d9983f9da15479e656f24176a5 149 SUPERFAMILY SSF102400 1 145 3.66E-42 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VAB027_445 656a0bd63a4ce12c5014b323b6330ac2 132 Gene3D G3DSA:2.40.50.200 26 132 1.1E-18 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VAB027_445 656a0bd63a4ce12c5014b323b6330ac2 132 SUPERFAMILY SSF101756 29 131 6.67E-24 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VAB027_445 656a0bd63a4ce12c5014b323b6330ac2 132 Pfam PF04076 Bacterial OB fold (BOF) protein 59 130 8.0E-11 T 14-10-2018 IPR005220 Bacterial OB-fold VAB027_287 d0afc56295e3f68b3fb071719ec9ab87 401 Pfam PF13252 Protein of unknown function (DUF4043) 49 397 2.6E-130 T 14-10-2018 IPR025267 Protein of unknown function DUF4043 VAB027_1447 381e73b03d0a85f3fa341e9badac5c86 448 Pfam PF03390 2-hydroxycarboxylate transporter family 25 442 3.2E-148 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 VAB027_1447 381e73b03d0a85f3fa341e9badac5c86 448 PIRSF PIRSF005348 1 448 5.6E-163 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 VAB027_3176 839bbb0acd2877483bb12482588afa05 172 Gene3D G3DSA:3.90.79.10 1 159 1.6E-50 T 14-10-2018 VAB027_3176 839bbb0acd2877483bb12482588afa05 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_3176 839bbb0acd2877483bb12482588afa05 172 SUPERFAMILY SSF55811 6 152 1.11E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_3176 839bbb0acd2877483bb12482588afa05 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.33 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VAB027_3176 839bbb0acd2877483bb12482588afa05 172 Pfam PF00293 NUDIX domain 7 145 1.4E-26 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_3176 839bbb0acd2877483bb12482588afa05 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_3176 839bbb0acd2877483bb12482588afa05 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAB027_2139 686364008b49122cf40f124c9c14ad70 1613 SUPERFAMILY SSF53223 754 940 1.06E-25 T 14-10-2018 VAB027_2139 686364008b49122cf40f124c9c14ad70 1613 SUPERFAMILY SSF51735 945 1282 1.51E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2139 686364008b49122cf40f124c9c14ad70 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VAB027_2139 686364008b49122cf40f124c9c14ad70 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VAB027_386 37c303efe9b4642b798c6d5910f856e4 73 SUPERFAMILY SSF57783 15 48 1.53E-5 T 14-10-2018 VAB027_1104 d78df3f006533627bbc835618a99a21b 278 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 198 2.1E-44 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VAB027_1417 853be68df7609baf1f55a637a56dd9da 204 SUPERFAMILY SSF48452 90 188 1.22E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_1417 853be68df7609baf1f55a637a56dd9da 204 PIRSF PIRSF006170 1 204 1.3E-52 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 VAB027_1417 853be68df7609baf1f55a637a56dd9da 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.8E-56 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VAB027_1417 853be68df7609baf1f55a637a56dd9da 204 Gene3D G3DSA:1.25.40.10 28 203 1.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2932 e033d1fbf81118b58554a419fa7f31c0 257 SMART SM00900 144 242 2.4E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAB027_2932 e033d1fbf81118b58554a419fa7f31c0 257 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 254 36.61 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VAB027_2932 e033d1fbf81118b58554a419fa7f31c0 257 PIRSF PIRSF009437 1 257 1.0E-109 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VAB027_2932 e033d1fbf81118b58554a419fa7f31c0 257 Pfam PF04205 FMN-binding domain 144 239 2.0E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAB027_2932 e033d1fbf81118b58554a419fa7f31c0 257 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 250 8.7E-96 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VAB027_120 abcf691df3a80088e8e8040db40f1b33 109 Gene3D G3DSA:2.40.50.660 32 108 1.9E-7 T 14-10-2018 VAB027_120 abcf691df3a80088e8e8040db40f1b33 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 2.6E-25 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 VAB027_1774 8c0b124cac394be453be3f3badf68fb3 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 73 4.6E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAB027_1774 8c0b124cac394be453be3f3badf68fb3 300 Gene3D G3DSA:1.10.3720.10 93 296 3.5E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1774 8c0b124cac394be453be3f3badf68fb3 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 2.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1774 8c0b124cac394be453be3f3badf68fb3 300 SUPERFAMILY SSF161098 96 281 3.01E-26 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3183 9c69ac090983264bdcad6db5f4a1972d 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 9.8E-134 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VAB027_3183 9c69ac090983264bdcad6db5f4a1972d 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 3.4E-157 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VAB027_819 0eaf27bc47df979f41227d3c6f816910 303 Gene3D G3DSA:3.40.50.1980 171 274 7.4E-106 T 14-10-2018 VAB027_819 0eaf27bc47df979f41227d3c6f816910 303 Pfam PF01497 Periplasmic binding protein 41 275 1.3E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VAB027_819 0eaf27bc47df979f41227d3c6f816910 303 SUPERFAMILY SSF53807 16 281 2.35E-59 T 14-10-2018 VAB027_819 0eaf27bc47df979f41227d3c6f816910 303 Gene3D G3DSA:3.40.50.1980 25 280 7.4E-106 T 14-10-2018 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 9.7E-42 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.763 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 SMART SM01219 1 104 6.7E-54 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 SUPERFAMILY SSF55387 1 103 8.55E-39 T 14-10-2018 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 Pfam PF01491 Frataxin-like domain 1 100 2.7E-29 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_106 01f9dab16528320a7d82b42ad06c2c93 104 Gene3D G3DSA:3.30.920.10 1 104 1.6E-38 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAB027_1745 f16aa2a9e1c93f11070e42d2b857468e 355 SUPERFAMILY SSF53686 23 335 1.07E-69 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_1745 f16aa2a9e1c93f11070e42d2b857468e 355 Gene3D G3DSA:3.40.50.1100 25 324 5.6E-66 T 14-10-2018 VAB027_1745 f16aa2a9e1c93f11070e42d2b857468e 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 4.6E-40 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_1745 f16aa2a9e1c93f11070e42d2b857468e 355 Gene3D G3DSA:3.40.50.1100 51 157 5.6E-66 T 14-10-2018 VAB027_451 fe9dcb1ad126321150ec9d7d6b19213f 583 Gene3D G3DSA:3.40.50.300 251 534 1.0E-10 T 14-10-2018 VAB027_451 fe9dcb1ad126321150ec9d7d6b19213f 583 SUPERFAMILY SSF52540 149 531 3.92E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1844 3938d22f1aa9b31864ca4b9155f142c5 242 SUPERFAMILY SSF53335 20 242 1.39E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAB027_1844 3938d22f1aa9b31864ca4b9155f142c5 242 Pfam PF13649 Methyltransferase domain 60 158 4.7E-13 T 14-10-2018 VAB027_1844 3938d22f1aa9b31864ca4b9155f142c5 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.95 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VAB027_1844 3938d22f1aa9b31864ca4b9155f142c5 242 Gene3D G3DSA:3.40.50.150 18 242 1.4E-63 T 14-10-2018 VAB027_1844 3938d22f1aa9b31864ca4b9155f142c5 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.1E-118 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VAB027_1844 3938d22f1aa9b31864ca4b9155f142c5 242 PIRSF PIRSF006325 1 242 3.3E-128 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VAB027_2279 f1d50dea1b6d631c2a693387ecd1e39e 478 Pfam PF13460 NAD(P)H-binding 8 151 1.0E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain VAB027_2279 f1d50dea1b6d631c2a693387ecd1e39e 478 SUPERFAMILY SSF51735 1 295 8.58E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2279 f1d50dea1b6d631c2a693387ecd1e39e 478 Gene3D G3DSA:3.40.50.720 2 263 6.3E-32 T 14-10-2018 VAB027_2279 f1d50dea1b6d631c2a693387ecd1e39e 478 Pfam PF11066 Protein of unknown function (DUF2867) 337 467 1.7E-13 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 Gene3D G3DSA:1.10.10.920 369 462 9.3E-35 T 14-10-2018 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 SMART SM00729 57 277 2.5E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 SUPERFAMILY SSF102114 11 449 4.45E-144 T 14-10-2018 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 PIRSF PIRSF000167 8 459 3.3E-171 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 Pfam PF04055 Radical SAM superfamily 62 232 6.5E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 5.5E-208 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 Gene3D G3DSA:3.80.30.20 7 368 1.9E-136 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAB027_100 7cbf7283bb04defd787fe2464705aaa8 462 Pfam PF06969 HemN C-terminal domain 368 436 5.7E-11 T 14-10-2018 IPR010723 HemN, C-terminal VAB027_2942 b3bde56d27e39c1fee999e1503111c1a 193 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 115 1.5E-15 T 14-10-2018 IPR003111 Lon, substrate-binding domain VAB027_2942 b3bde56d27e39c1fee999e1503111c1a 193 SUPERFAMILY SSF88697 3 188 4.47E-47 T 14-10-2018 IPR015947 PUA-like superfamily VAB027_2942 b3bde56d27e39c1fee999e1503111c1a 193 SMART SM00464 3 189 8.4E-4 T 14-10-2018 IPR003111 Lon, substrate-binding domain VAB027_2942 b3bde56d27e39c1fee999e1503111c1a 193 Gene3D G3DSA:2.30.130.40 1 110 1.1E-30 T 14-10-2018 VAB027_1788 462086e82f751bfe412c9504edc23588 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 197 5.7E-58 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VAB027_1788 462086e82f751bfe412c9504edc23588 198 SUPERFAMILY SSF89392 20 197 2.0E-52 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VAB027_1788 462086e82f751bfe412c9504edc23588 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 28 185 6.9E-55 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VAB027_1788 462086e82f751bfe412c9504edc23588 198 Gene3D G3DSA:2.50.20.10 16 197 7.8E-48 T 14-10-2018 VAB027_1788 462086e82f751bfe412c9504edc23588 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 30.791 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VAB027_3715 1ae3161f1c1e2af95339bebd18ecff58 400 Pfam PF07690 Major Facilitator Superfamily 14 348 2.1E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_3715 1ae3161f1c1e2af95339bebd18ecff58 400 SUPERFAMILY SSF103473 5 379 9.29E-53 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_3715 1ae3161f1c1e2af95339bebd18ecff58 400 Gene3D G3DSA:1.20.1720.10 8 378 2.5E-73 T 14-10-2018 VAB027_3715 1ae3161f1c1e2af95339bebd18ecff58 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 370 1.6E-84 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VAB027_3695 4e09b34a104dd6fd1a83245bd572b2c8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3695 4e09b34a104dd6fd1a83245bd572b2c8 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3695 4e09b34a104dd6fd1a83245bd572b2c8 193 Gene3D G3DSA:1.10.357.10 6 193 6.8E-65 T 14-10-2018 VAB027_3695 4e09b34a104dd6fd1a83245bd572b2c8 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 9.6E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_3695 4e09b34a104dd6fd1a83245bd572b2c8 193 SUPERFAMILY SSF46689 9 84 3.24E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_2840 6678886a32383247175faf974f673ad7 235 Pfam PF13861 FlgD Tudor-like domain 93 229 8.5E-15 T 14-10-2018 IPR025963 FlgD Tudor-like domain VAB027_2840 6678886a32383247175faf974f673ad7 235 Gene3D G3DSA:2.60.40.4070 110 196 1.4E-36 T 14-10-2018 VAB027_2840 6678886a32383247175faf974f673ad7 235 Pfam PF13860 FlgD Ig-like domain 117 184 1.3E-20 T 14-10-2018 IPR025965 FlgD Ig-like domain VAB027_2840 6678886a32383247175faf974f673ad7 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.1E-21 T 14-10-2018 IPR005648 Flagellar hook capping protein VAB027_2840 6678886a32383247175faf974f673ad7 235 Gene3D G3DSA:2.30.30.910 98 221 1.4E-36 T 14-10-2018 VAB027_2612 2a7162ab785e7cc24a57bf77dfef67eb 435 Pfam PF00425 chorismate binding enzyme 165 417 6.9E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAB027_2612 2a7162ab785e7cc24a57bf77dfef67eb 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.457 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VAB027_2612 2a7162ab785e7cc24a57bf77dfef67eb 435 SUPERFAMILY SSF56322 29 425 1.44E-98 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_2612 2a7162ab785e7cc24a57bf77dfef67eb 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 2.5E-104 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VAB027_2612 2a7162ab785e7cc24a57bf77dfef67eb 435 Gene3D G3DSA:3.60.120.10 3 429 5.0E-128 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VAB027_1917 364647acb43a1456394ab0d685f58bbd 261 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 249 2.1E-34 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VAB027_1917 364647acb43a1456394ab0d685f58bbd 261 Pfam PF02654 Cobalamin-5-phosphate synthase 15 249 2.1E-53 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VAB027_1917 364647acb43a1456394ab0d685f58bbd 261 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 261 46.836 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VAB027_2803 1c874b0312a3a75fd640efd01b11067a 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.7E-38 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VAB027_2803 1c874b0312a3a75fd640efd01b11067a 127 PIRSF PIRSF005610 1 121 1.2E-18 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VAB027_539 f8e7d6282fa146a0738013d13a317aa5 311 Pfam PF14491 Protein of unknown function (DUF4435) 32 257 4.1E-28 T 14-10-2018 IPR029492 Domain of unknown function DUF4435 VAB027_2726 65ca5328931af58363cd98ec92099947 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 99 5.3E-6 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2726 65ca5328931af58363cd98ec92099947 114 PIRSF PIRSF000169 1 114 2.9E-36 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VAB027_2726 65ca5328931af58363cd98ec92099947 114 SUPERFAMILY SSF81343 4 113 6.1E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2726 65ca5328931af58363cd98ec92099947 114 Gene3D G3DSA:1.20.1300.10 1 114 1.6E-28 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAB027_2726 65ca5328931af58363cd98ec92099947 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.5E-32 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VAB027_1119 c6ddb6bf9e5145c31c5bcadc10fddbc0 285 SUPERFAMILY SSF103481 176 275 1.22E-9 T 14-10-2018 VAB027_1119 c6ddb6bf9e5145c31c5bcadc10fddbc0 285 Pfam PF00892 EamA-like transporter family 143 271 9.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1119 c6ddb6bf9e5145c31c5bcadc10fddbc0 285 Pfam PF00892 EamA-like transporter family 1 131 1.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_1119 c6ddb6bf9e5145c31c5bcadc10fddbc0 285 SUPERFAMILY SSF103481 34 132 1.57E-8 T 14-10-2018 VAB027_2208 d3b54584478d8373fa43efc540148557 425 Pfam PF12704 MacB-like periplasmic core domain 19 253 1.5E-20 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VAB027_2208 d3b54584478d8373fa43efc540148557 425 Pfam PF02687 FtsX-like permease family 320 418 2.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAB027_2091 54127e464df77693da70945783684147 709 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 247 503 3.9E-17 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 VAB027_2103 5782bb6d49629d8060c5ad4b7d100496 266 Gene3D G3DSA:1.10.530.10 119 262 4.9E-14 T 14-10-2018 VAB027_2103 5782bb6d49629d8060c5ad4b7d100496 266 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 123 259 8.9E-18 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VAB027_1642 5256217e745d05e30dd1a0ae31739b2a 105 SUPERFAMILY SSF81301 5 105 1.28E-34 T 14-10-2018 VAB027_1642 5256217e745d05e30dd1a0ae31739b2a 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.2E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VAB027_1642 5256217e745d05e30dd1a0ae31739b2a 105 Pfam PF02410 Ribosomal silencing factor during starvation 14 104 3.1E-26 T 14-10-2018 VAB027_1642 5256217e745d05e30dd1a0ae31739b2a 105 Gene3D G3DSA:3.30.460.10 2 105 2.1E-34 T 14-10-2018 VAB027_1642 5256217e745d05e30dd1a0ae31739b2a 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 23.415 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VAB027_449 f59dc2e0ef09c21d1f8cc861ca10441b 107 Pfam PF13476 AAA domain 11 87 1.8E-9 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VAB027_449 f59dc2e0ef09c21d1f8cc861ca10441b 107 SUPERFAMILY SSF52540 8 90 2.3E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_449 f59dc2e0ef09c21d1f8cc861ca10441b 107 Gene3D G3DSA:3.40.50.300 7 105 3.1E-11 T 14-10-2018 VAB027_2092 c38827309ed115a953694ac1b5bf1780 244 Pfam PF11153 Protein of unknown function (DUF2931) 4 228 2.5E-49 T 14-10-2018 IPR021326 Protein of unknown function DUF2931 VAB027_941 3bb40feb52ea3335c92739f891b558c5 374 SUPERFAMILY SSF103473 2 363 4.84E-29 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_941 3bb40feb52ea3335c92739f891b558c5 374 Gene3D G3DSA:1.20.1250.20 1 365 6.0E-22 T 14-10-2018 VAB027_941 3bb40feb52ea3335c92739f891b558c5 374 Pfam PF05977 Transmembrane secretion effector 3 285 1.8E-5 T 14-10-2018 IPR010290 Transmembrane secretion effector VAB027_844 84608b5838e19cf11f1dec83a93306be 182 Gene3D G3DSA:2.40.160.20 19 182 3.0E-15 T 14-10-2018 VAB027_844 84608b5838e19cf11f1dec83a93306be 182 Pfam PF13505 Outer membrane protein beta-barrel domain 11 182 2.6E-8 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_844 84608b5838e19cf11f1dec83a93306be 182 SUPERFAMILY SSF56925 27 182 4.19E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_1301 96b5a933a769939d6cc56862f671e0cc 206 Gene3D G3DSA:3.10.50.40 68 206 1.2E-48 T 14-10-2018 VAB027_1301 96b5a933a769939d6cc56862f671e0cc 206 SUPERFAMILY SSF54534 7 205 2.55E-54 T 14-10-2018 VAB027_1301 96b5a933a769939d6cc56862f671e0cc 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 7.3E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VAB027_1301 96b5a933a769939d6cc56862f671e0cc 206 Gene3D G3DSA:1.10.287.460 4 67 3.7E-19 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VAB027_1301 96b5a933a769939d6cc56862f671e0cc 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 8.7E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 8.4E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 8.4E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 8.4E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 8.4E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 8.4E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 7.1E-138 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 Gene3D G3DSA:3.20.20.80 1 478 1.9E-170 T 14-10-2018 VAB027_2201 7d922be7ec9df5ca15ad3b43fe643837 478 SUPERFAMILY SSF51445 3 471 3.23E-165 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VAB027_471 f5a6b9255a4a2ab3c016e3787ebcd138 430 Gene3D G3DSA:3.40.190.10 132 248 3.6E-30 T 14-10-2018 VAB027_471 f5a6b9255a4a2ab3c016e3787ebcd138 430 Gene3D G3DSA:3.40.190.10 41 286 3.6E-30 T 14-10-2018 VAB027_471 f5a6b9255a4a2ab3c016e3787ebcd138 430 SUPERFAMILY SSF53850 29 287 4.27E-35 T 14-10-2018 VAB027_471 f5a6b9255a4a2ab3c016e3787ebcd138 430 Pfam PF13343 Bacterial extracellular solute-binding protein 78 288 1.3E-19 T 14-10-2018 VAB027_3409 ea21eaecb42e6655e032e26e63046922 275 SUPERFAMILY SSF56317 3 263 5.36E-77 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAB027_3409 ea21eaecb42e6655e032e26e63046922 275 Gene3D G3DSA:3.60.110.10 1 269 8.3E-86 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAB027_3409 ea21eaecb42e6655e032e26e63046922 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VAB027_3409 ea21eaecb42e6655e032e26e63046922 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 3.3E-50 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VAB027_1097 40726d687c77496ca9e9e6f783910dff 659 Gene3D G3DSA:1.10.287.950 329 659 1.6E-68 T 14-10-2018 VAB027_1097 40726d687c77496ca9e9e6f783910dff 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 625 1.9E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1097 40726d687c77496ca9e9e6f783910dff 659 SMART SM00304 330 382 0.0034 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAB027_1097 40726d687c77496ca9e9e6f783910dff 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 2.0E-12 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAB027_1097 40726d687c77496ca9e9e6f783910dff 659 SMART SM00283 397 658 9.7E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAB027_1097 40726d687c77496ca9e9e6f783910dff 659 SUPERFAMILY SSF58104 350 659 7.72E-72 T 14-10-2018 VAB027_2580 eebe5deaec4ba4da5975ba564ee4e961 149 Gene3D G3DSA:3.10.129.10 2 137 4.5E-36 T 14-10-2018 VAB027_2580 eebe5deaec4ba4da5975ba564ee4e961 149 Pfam PF13279 Thioesterase-like superfamily 16 136 7.9E-21 T 14-10-2018 VAB027_2580 eebe5deaec4ba4da5975ba564ee4e961 149 SUPERFAMILY SSF54637 4 134 3.45E-31 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_1946 3d9a198ebe93930392b2bf2378397931 224 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 4.1E-62 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 VAB027_1591 39cb2afc33c436a584551aeb812cf9dd 180 Pfam PF05069 Phage virion morphogenesis family 14 172 4.7E-22 T 14-10-2018 IPR006522 Phage virion morphogensis protein VAB027_3481 151802cb19228fce1ce292d74f829216 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.2E-22 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 VAB027_1213 11f5f66bf2d39b4a055550ca5f4c1a47 278 PIRSF PIRSF028200 1 278 2.7E-100 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VAB027_19 3045386b1cda53116f5335417a1cd561 94 Gene3D G3DSA:3.30.70.260 1 89 1.9E-11 T 14-10-2018 VAB027_19 3045386b1cda53116f5335417a1cd561 94 SUPERFAMILY SSF55021 3 75 6.41E-10 T 14-10-2018 VAB027_19 3045386b1cda53116f5335417a1cd561 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 7.0E-4 T 14-10-2018 VAB027_19 3045386b1cda53116f5335417a1cd561 94 Pfam PF13710 ACT domain 12 73 4.8E-21 T 14-10-2018 VAB027_1379 b7771561fa173cec0b8cd73ff91776a1 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 4.7E-123 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VAB027_1379 b7771561fa173cec0b8cd73ff91776a1 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.118 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VAB027_3738 863385fc3cbd02402b411280575a863d 321 Pfam PF12835 Integrase 127 255 1.4E-17 T 14-10-2018 IPR024456 Integrase catalytic domain, putative VAB027_3738 863385fc3cbd02402b411280575a863d 321 Gene3D G3DSA:1.10.150.130 25 125 1.2E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VAB027_3738 863385fc3cbd02402b411280575a863d 321 SUPERFAMILY SSF56349 37 255 1.97E-16 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAB027_694 cb3d621f03da2e5fbc679fc3b310b05d 105 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 93 7.7E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_694 cb3d621f03da2e5fbc679fc3b310b05d 105 Gene3D G3DSA:3.30.2310.20 1 99 2.3E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_440 5a8e0f9f73a6b7338c7b89fa35e09c0c 386 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 303 1.2E-72 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VAB027_1124 e67fde07a36a09346db51b0e0208bf4f 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 2.0E-26 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VAB027_2533 142eade30357491a65ae46c125d48f01 178 Gene3D G3DSA:3.40.630.30 1 178 9.9E-49 T 14-10-2018 VAB027_2533 142eade30357491a65ae46c125d48f01 178 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 4.6E-25 T 14-10-2018 IPR000182 GNAT domain VAB027_2533 142eade30357491a65ae46c125d48f01 178 SUPERFAMILY SSF55729 2 177 1.8E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_879 861163646bdafa18d8881c00a37666a6 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 112 7.9E-28 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like VAB027_1206 75ac591385b17766c18f07febae2837d 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 194 1.3E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAB027_284 b7570da8c78c71191a46ab8445a63f78 192 SUPERFAMILY SSF49899 19 166 2.16E-8 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAB027_3309 f42a009f22118643e57c96720e020984 287 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 272 9.0E-100 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VAB027_3309 f42a009f22118643e57c96720e020984 287 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 274 3.4E-129 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 VAB027_3309 f42a009f22118643e57c96720e020984 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 6.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3309 f42a009f22118643e57c96720e020984 287 SUPERFAMILY SSF161098 13 265 3.01E-56 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3309 f42a009f22118643e57c96720e020984 287 Gene3D G3DSA:1.10.3720.10 17 275 6.0E-63 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2734 885c794724e5258048d82609b11317eb 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.6E-19 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 VAB027_2987 750216e82c1cf36130483e23c2a7df1d 59 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 3.3E-24 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 VAB027_2849 2af01e02d1fe669706c8c0db40e33865 211 PIRSF PIRSF028688 1 211 3.0E-124 T 14-10-2018 IPR014549 Flagellar protein FlgO VAB027_571 dbb75ef04627bf558a6aa1631b8e21cf 173 Gene3D G3DSA:3.90.79.10 12 152 2.0E-24 T 14-10-2018 VAB027_571 dbb75ef04627bf558a6aa1631b8e21cf 173 Pfam PF00293 NUDIX domain 22 144 5.0E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAB027_571 dbb75ef04627bf558a6aa1631b8e21cf 173 SUPERFAMILY SSF55811 20 143 2.44E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_571 dbb75ef04627bf558a6aa1631b8e21cf 173 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAB027_5 880525a1c241c624a7d7109771f52320 139 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 120 7.8E-6 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAB027_5 880525a1c241c624a7d7109771f52320 139 SUPERFAMILY SSF54534 50 122 2.88E-7 T 14-10-2018 VAB027_5 880525a1c241c624a7d7109771f52320 139 Gene3D G3DSA:3.10.50.30 44 128 1.1E-9 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAB027_1773 9c98f127227a29d0fec5145882b7d7db 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.2E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1773 9c98f127227a29d0fec5145882b7d7db 306 Gene3D G3DSA:1.10.3720.10 84 300 4.8E-22 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1773 9c98f127227a29d0fec5145882b7d7db 306 SUPERFAMILY SSF161098 88 291 2.62E-20 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3489 bda62419c1d2b9da502ccd2bb935261a 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.3E-51 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VAB027_3489 bda62419c1d2b9da502ccd2bb935261a 154 SUPERFAMILY SSF52540 27 133 8.11E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_3489 bda62419c1d2b9da502ccd2bb935261a 154 Gene3D G3DSA:3.40.50.300 2 152 3.5E-47 T 14-10-2018 VAB027_3489 bda62419c1d2b9da502ccd2bb935261a 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.1E-41 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 2.2E-142 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 51.13 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 3.5E-143 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 Gene3D G3DSA:3.20.20.210 1 355 2.5E-160 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAB027_3509 ae093fbb7800bc14c301c1e76e85f131 355 SUPERFAMILY SSF51726 1 353 2.62E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAB027_3607 d1afc34c5b1fd83d345ae4d34965b70a 138 Pfam PF01609 Transposase DDE domain 2 124 4.2E-7 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAB027_2754 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.5E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAB027_2754 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.5E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAB027_2754 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.5E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAB027_2754 d728c15b625ed0280ddce8a398a54e33 89 PIRSF PIRSF004669 1 89 3.3E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAB027_2754 d728c15b625ed0280ddce8a398a54e33 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 8.5E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAB027_2754 d728c15b625ed0280ddce8a398a54e33 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.4E-34 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VAB027_3174 25d9d4b7e2588847b5bcd3df9ad1ad7e 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 3.4E-52 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAB027_2684 6d07c22c35ef99d404bf9ec03f7af0f3 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 4.2E-65 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VAB027_2140 6b122bba728307e95b893d8aa8fece42 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 1.2E-27 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 VAB027_1142 0c853227ab33025ebaa629ca1124a407 275 Pfam PF03618 Kinase/pyrophosphorylase 8 265 7.3E-73 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 VAB027_1142 0c853227ab33025ebaa629ca1124a407 275 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 5 274 66.173 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein VAB027_1542 fd20164ccb13a959945131791d1675cb 225 Gene3D G3DSA:1.10.3720.10 12 225 1.1E-52 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1542 fd20164ccb13a959945131791d1675cb 225 SUPERFAMILY SSF161098 15 210 2.62E-48 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1542 fd20164ccb13a959945131791d1675cb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.1E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3698 7c14b1369818e37106377357cd2d3db5 83 Pfam PF04380 Membrane fusogenic activity 1 78 4.8E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity VAB027_2525 baaf5548a69c4d48e29301a81018aaa4 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 4.0E-47 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 VAB027_68 10adeacc845785fd85c188e2fd6b0c92 141 SUPERFAMILY SSF52402 3 139 6.2E-32 T 14-10-2018 VAB027_68 10adeacc845785fd85c188e2fd6b0c92 141 PIRSF PIRSF006276 1 141 6.4E-52 T 14-10-2018 IPR006015 Universal stress protein A VAB027_68 10adeacc845785fd85c188e2fd6b0c92 141 Gene3D G3DSA:3.40.50.620 2 141 4.8E-46 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAB027_68 10adeacc845785fd85c188e2fd6b0c92 141 Pfam PF00582 Universal stress protein family 3 138 7.6E-21 T 14-10-2018 IPR006016 UspA VAB027_537 0a3aa09915a2968d1931b1cfa9a5a395 346 Pfam PF05145 Transition state regulatory protein AbrB 61 338 4.3E-50 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 VAB027_537 0a3aa09915a2968d1931b1cfa9a5a395 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 335 8.0E-29 T 14-10-2018 IPR017516 AbrB duplication VAB027_2111 6be288d6d55324cfaca9649dd2b053db 158 Pfam PF05751 FixH 7 147 1.4E-42 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH VAB027_2289 ab3af34ecf1e5dd29934684541832882 133 Pfam PF12614 Ribosome recycling factor 6 130 6.8E-55 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial VAB027_326 480c002f30a5c5a6284a612af2ce0eef 306 Pfam PF13737 Transposase DDE domain 19 129 9.4E-45 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_656 480c002f30a5c5a6284a612af2ce0eef 306 Pfam PF13737 Transposase DDE domain 19 129 9.4E-45 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_682 480c002f30a5c5a6284a612af2ce0eef 306 Pfam PF13737 Transposase DDE domain 19 129 9.4E-45 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_725 480c002f30a5c5a6284a612af2ce0eef 306 Pfam PF13737 Transposase DDE domain 19 129 9.4E-45 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_672 480c002f30a5c5a6284a612af2ce0eef 306 Pfam PF13737 Transposase DDE domain 19 129 9.4E-45 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_653 480c002f30a5c5a6284a612af2ce0eef 306 Pfam PF13737 Transposase DDE domain 19 129 9.4E-45 T 14-10-2018 IPR025668 Transposase DDE domain VAB027_3010 1c566a0f4a62138db698366c00b8be88 276 SUPERFAMILY SSF53807 24 270 1.65E-58 T 14-10-2018 VAB027_3010 1c566a0f4a62138db698366c00b8be88 276 Pfam PF01497 Periplasmic binding protein 28 249 1.7E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VAB027_3010 1c566a0f4a62138db698366c00b8be88 276 Gene3D G3DSA:3.40.50.1980 145 272 1.6E-31 T 14-10-2018 VAB027_3010 1c566a0f4a62138db698366c00b8be88 276 Gene3D G3DSA:3.40.50.1980 25 142 6.2E-36 T 14-10-2018 VAB027_3010 1c566a0f4a62138db698366c00b8be88 276 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 4 274 51.425 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 495 513 9.9E-17 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 374 9.9E-17 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 9.9E-17 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 518 532 9.9E-17 T 14-10-2018 IPR001775 GspD/PilQ family VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 Pfam PF07655 Secretin N-terminal domain 145 243 7.1E-24 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 Pfam PF00263 Bacterial type II and III secretion system protein 355 530 1.0E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 SMART SM00965 93 141 3.4E-4 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 237 530 3.0E-104 T 14-10-2018 IPR013358 Pilus biogenesis, MshL VAB027_3429 62e9a911792cc7ffecb3c81a793ea4c3 554 Gene3D G3DSA:3.55.50.30 51 145 6.5E-10 T 14-10-2018 VAB027_3755 7a97aafc6ee6b3c79e5d152d40cb6b8e 929 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 768 842 5.5E-26 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VAB027_3755 7a97aafc6ee6b3c79e5d152d40cb6b8e 929 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 460 619 9.8E-15 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VAB027_820 20cecf83cadf4701c8355b878a7e44c1 252 SUPERFAMILY SSF56235 2 242 1.37E-35 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_820 20cecf83cadf4701c8355b878a7e44c1 252 Gene3D G3DSA:3.60.20.10 1 250 1.7E-84 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_820 20cecf83cadf4701c8355b878a7e44c1 252 Pfam PF13230 Glutamine amidotransferases class-II 25 196 4.6E-20 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VAB027_1033 67086efa61421909d8dce5ea3a2d76bd 318 SUPERFAMILY SSF161098 96 295 1.31E-14 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1033 67086efa61421909d8dce5ea3a2d76bd 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 1.1E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1033 67086efa61421909d8dce5ea3a2d76bd 318 Gene3D G3DSA:1.10.3720.10 89 304 8.3E-19 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 Gene3D G3DSA:2.30.330.10 45 136 1.2E-33 T 14-10-2018 IPR036429 SpoA-like superfamily VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VAB027_2757 0ff37f14d568d3689c7ec977cf2cb56c 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 14-10-2018 IPR036429 SpoA-like superfamily VAB027_2256 523bb0c539ca44e04af69458f29ea792 382 Pfam PF12698 ABC-2 family transporter protein 16 353 3.0E-39 T 14-10-2018 VAB027_2221 1d3e8b3f0741685a5188f5116b65617c 497 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 185 206 1.1E-20 T 14-10-2018 VAB027_2221 1d3e8b3f0741685a5188f5116b65617c 497 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 207 233 1.1E-20 T 14-10-2018 VAB027_2221 1d3e8b3f0741685a5188f5116b65617c 497 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 118 139 1.1E-20 T 14-10-2018 VAB027_2221 1d3e8b3f0741685a5188f5116b65617c 497 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 43 68 1.1E-20 T 14-10-2018 VAB027_2221 1d3e8b3f0741685a5188f5116b65617c 497 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 274 286 1.1E-20 T 14-10-2018 VAB027_2221 1d3e8b3f0741685a5188f5116b65617c 497 Pfam PF00361 Proton-conducting membrane transporter 94 314 2.9E-42 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAB027_3406 6d1e918aac04c21aff7d3f98203263e5 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.1E-34 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain VAB027_3406 6d1e918aac04c21aff7d3f98203263e5 140 SUPERFAMILY SSF89946 7 126 4.71E-40 T 14-10-2018 IPR036701 RraB-like superfamily VAB027_3406 6d1e918aac04c21aff7d3f98203263e5 140 Gene3D G3DSA:3.30.70.970 1 132 5.4E-61 T 14-10-2018 IPR036701 RraB-like superfamily VAB027_3406 6d1e918aac04c21aff7d3f98203263e5 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.398 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VAB027_3406 6d1e918aac04c21aff7d3f98203263e5 140 PIRSF PIRSF018193 8 140 2.5E-61 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 Gene3D G3DSA:1.10.287.1080 2 126 1.9E-45 T 14-10-2018 VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 9.0E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 229 3.1E-7 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 SUPERFAMILY SSF101386 3 104 4.51E-24 T 14-10-2018 VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 SUPERFAMILY SSF101386 138 240 7.56E-25 T 14-10-2018 VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 5.5E-104 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VAB027_3076 e7d73da5b37100eb387e8d3346863c67 271 Gene3D G3DSA:1.10.287.1080 132 265 1.3E-46 T 14-10-2018 VAB027_1874 310738f237ff1efaf565cd1176fbe5d9 227 PIRSF PIRSF028111 1 227 1.6E-82 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 VAB027_1874 310738f237ff1efaf565cd1176fbe5d9 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-11 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 VAB027_3146 6b09316086c0ba44ebffcb82cafb5db0 176 SUPERFAMILY SSF47413 9 68 3.75E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_3146 6b09316086c0ba44ebffcb82cafb5db0 176 Gene3D G3DSA:1.10.260.40 2 73 1.8E-19 T 14-10-2018 VAB027_3146 6b09316086c0ba44ebffcb82cafb5db0 176 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 8 70 8.1E-20 T 14-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 VAB027_398 1146259d781123d16d61d18cff7cf2dd 477 Pfam PF01266 FAD dependent oxidoreductase 10 373 4.1E-14 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAB027_398 1146259d781123d16d61d18cff7cf2dd 477 SUPERFAMILY SSF51905 5 305 1.05E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_398 1146259d781123d16d61d18cff7cf2dd 477 Gene3D G3DSA:3.50.50.60 5 97 7.9E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_659 db88153c941ad24de1034b2130ee9577 95 Gene3D G3DSA:3.30.2310.20 1 93 7.7E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_659 db88153c941ad24de1034b2130ee9577 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 1.7E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_1377 27cd89f1c8e02cf5efe5af314d2741aa 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAB027_1377 27cd89f1c8e02cf5efe5af314d2741aa 84 Gene3D G3DSA:3.30.70.20 2 83 1.5E-32 T 14-10-2018 VAB027_1377 27cd89f1c8e02cf5efe5af314d2741aa 84 SUPERFAMILY SSF54862 5 72 1.29E-15 T 14-10-2018 VAB027_1458 cc00368ea7ba4358517b720348e0a517 227 PIRSF PIRSF028137 1 227 5.6E-102 T 14-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane VAB027_2923 26726d890c3c309d1d7822f32bfaec7e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 3.2E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2923 26726d890c3c309d1d7822f32bfaec7e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 3.2E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2923 26726d890c3c309d1d7822f32bfaec7e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 3.2E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2923 26726d890c3c309d1d7822f32bfaec7e 451 SUPERFAMILY SSF161070 7 450 5.62E-118 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VAB027_2923 26726d890c3c309d1d7822f32bfaec7e 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 132 3.2E-22 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_2923 26726d890c3c309d1d7822f32bfaec7e 451 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 1.4E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAB027_3230 c77d7ab6d195c3dfb7a319af4aa29732 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 5.9E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAB027_3230 c77d7ab6d195c3dfb7a319af4aa29732 341 Gene3D G3DSA:1.10.3720.10 94 303 9.2E-15 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_3230 c77d7ab6d195c3dfb7a319af4aa29732 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 2.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_3230 c77d7ab6d195c3dfb7a319af4aa29732 341 SUPERFAMILY SSF161098 96 279 1.96E-18 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1303 686d12f5fb7551324540d57b2ba3bb5c 188 Gene3D G3DSA:3.10.450.350 93 186 1.3E-13 T 14-10-2018 VAB027_1303 686d12f5fb7551324540d57b2ba3bb5c 188 Pfam PF04225 Opacity-associated protein A LysM-like domain 104 188 9.0E-39 T 14-10-2018 IPR007340 Opacity-associated protein A VAB027_1303 686d12f5fb7551324540d57b2ba3bb5c 188 Pfam PF08525 Opacity-associated protein A N-terminal motif 36 62 1.1E-7 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VAB027_117 52dedc0a0892867d3488f4f550c7cdbb 205 Pfam PF01810 LysE type translocator 15 202 6.7E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_117 52dedc0a0892867d3488f4f550c7cdbb 205 PIRSF PIRSF006324 1 205 8.6E-57 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_1812 08d590868a6eb07587cf0caab83b82e6 533 Pfam PF03553 Na+/H+ antiporter family 165 497 9.9E-107 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAB027_2184 0b17c6852e918e7e0e7d14413a85002e 327 Pfam PF11279 Protein of unknown function (DUF3080) 26 323 7.7E-91 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 VAB027_958 03b3ee27891c99e2024d74ebc377dcf3 186 Pfam PF07603 Protein of unknown function (DUF1566) 41 177 2.6E-22 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 VAB027_1359 0547481b17d954506d666520a7ca5eba 243 SUPERFAMILY SSF55120 14 220 2.08E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1359 0547481b17d954506d666520a7ca5eba 243 Pfam PF00849 RNA pseudouridylate synthase 22 168 8.4E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1359 0547481b17d954506d666520a7ca5eba 243 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAB027_1359 0547481b17d954506d666520a7ca5eba 243 Gene3D G3DSA:3.30.2350.10 4 216 5.7E-68 T 14-10-2018 VAB027_3398 33ea44fba70e7edc7a37b36079b22373 468 PIRSF PIRSF006060 1 468 4.4E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_3398 33ea44fba70e7edc7a37b36079b22373 468 Gene3D G3DSA:1.20.1740.10 1 456 6.6E-62 T 14-10-2018 VAB027_3398 33ea44fba70e7edc7a37b36079b22373 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 6.5E-161 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VAB027_3398 33ea44fba70e7edc7a37b36079b22373 468 Pfam PF13520 Amino acid permease 5 411 1.5E-67 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_3463 535987b896bc24326ae2e817b5b2a4ff 254 SUPERFAMILY SSF56935 16 194 1.85E-5 T 14-10-2018 VAB027_3463 535987b896bc24326ae2e817b5b2a4ff 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 1.1E-51 T 14-10-2018 IPR007433 Protein of unknown function DUF481 VAB027_2915 6ead3e8ff0c5588df67c18a070aee812 129 Pfam PF07417 Transcriptional regulator Crl 6 122 9.3E-49 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VAB027_2915 6ead3e8ff0c5588df67c18a070aee812 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 30.048 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VAB027_2915 6ead3e8ff0c5588df67c18a070aee812 129 Gene3D G3DSA:3.30.310.230 2 128 3.2E-44 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VAB027_3581 02430763ab04525f9e343ccba9bda861 195 Pfam PF04222 Protein of unknown function (DUF416) 6 194 6.3E-77 T 14-10-2018 IPR007338 Protein of unknown function DUF416 VAB027_3581 02430763ab04525f9e343ccba9bda861 195 Gene3D G3DSA:1.20.1590.10 2 195 6.9E-65 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily VAB027_868 ef59193070afd5f669538440766dc4a1 550 Pfam PF13584 Oxygen tolerance 21 468 1.2E-77 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VAB027_2496 608556c0d7c51a7b79b1152123ef0eef 222 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 220 23.139 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAB027_2496 608556c0d7c51a7b79b1152123ef0eef 222 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 217 4.0E-42 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAB027_2797 32476b27b14431a65e64e11f4adf12d4 377 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 4.0E-69 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 VAB027_591 736caccbe2532877d46a456b1e8cbcb0 127 Pfam PF11782 Protein of unknown function (DUF3319) 1 88 7.0E-44 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 VAB027_1504 ec39f8e39a8a67eaf8aa9c194fc58ebd 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_1504 ec39f8e39a8a67eaf8aa9c194fc58ebd 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 5.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAB027_3503 97b1f45584d70333def3ce801a2d510c 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 467 1.3E-48 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAB027_3503 97b1f45584d70333def3ce801a2d510c 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 468 5.1E-81 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAB027_1930 d9f734152899bd4e7c8911418e46cdab 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 74 4.1E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAB027_1930 d9f734152899bd4e7c8911418e46cdab 92 SUPERFAMILY SSF54292 8 82 2.1E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAB027_1930 d9f734152899bd4e7c8911418e46cdab 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAB027_1930 d9f734152899bd4e7c8911418e46cdab 92 Gene3D G3DSA:3.10.20.30 4 81 5.3E-16 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VAB027_2730 7f1fa78fdc184d3506732c7eab273618 249 Pfam PF08907 Domain of unknown function (DUF1853) 35 221 2.5E-36 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 VAB027_584 a385187c1d1b0a4731d0ebe8c6daa56b 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 75 4.3E-34 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 VAB027_2334 560f0ffdfe6fded2939f150507fb913d 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 7.8E-37 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VAB027_3396 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3396 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3396 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3396 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAB027_3396 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAB027_943 0a1c6a392e76de0be0cc09897445d8dc 403 SUPERFAMILY SSF103473 4 388 7.59E-53 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_943 0a1c6a392e76de0be0cc09897445d8dc 403 Pfam PF07690 Major Facilitator Superfamily 25 225 1.6E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAB027_943 0a1c6a392e76de0be0cc09897445d8dc 403 Gene3D G3DSA:1.20.1720.10 14 389 9.3E-81 T 14-10-2018 VAB027_3405 1ce56d1497004fa2ea73b188da5611ef 265 Gene3D G3DSA:2.60.120.260 26 156 3.8E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_3405 1ce56d1497004fa2ea73b188da5611ef 265 SUPERFAMILY SSF49785 2 155 1.02E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VAB027_1266 98c25022ef2e6cdcc626e61a1a7d9bfe 326 Pfam PF01112 Asparaginase 6 323 4.4E-109 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VAB027_1266 98c25022ef2e6cdcc626e61a1a7d9bfe 326 SUPERFAMILY SSF56235 5 322 1.98E-96 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAB027_1266 98c25022ef2e6cdcc626e61a1a7d9bfe 326 Gene3D G3DSA:3.60.20.30 191 326 7.1E-49 T 14-10-2018 VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-26 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-26 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-26 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-26 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 SUPERFAMILY SSF52540 4 286 3.76E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 5.8E-70 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VAB027_1257 2661b83d39a9ebc59b43bca22486fa75 289 Gene3D G3DSA:3.40.50.300 1 289 1.1E-112 T 14-10-2018 VAB027_2198 ce11911c24f1aa9ec35e3062b3beab63 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 151 9.3E-41 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VAB027_2198 ce11911c24f1aa9ec35e3062b3beab63 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.1E-38 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VAB027_2198 ce11911c24f1aa9ec35e3062b3beab63 156 SUPERFAMILY SSF51197 1 152 4.67E-40 T 14-10-2018 VAB027_2198 ce11911c24f1aa9ec35e3062b3beab63 156 Gene3D G3DSA:2.60.120.370 1 153 5.8E-37 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VAB027_608 c869aace53cfb8f67026ebf84ed43121 180 Pfam PF11810 Domain of unknown function (DUF3332) 6 174 2.7E-45 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 ProSitePatterns PS00194 Thioredoxin family active site. 125 143 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 SUPERFAMILY SSF54423 32 87 8.24E-14 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 SUPERFAMILY SSF52833 107 247 1.06E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 Gene3D G3DSA:3.40.30.10 92 249 2.6E-46 T 14-10-2018 VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 Pfam PF10411 Disulfide bond isomerase protein N-terminus 35 86 8.5E-15 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 Pfam PF13098 Thioredoxin-like domain 118 246 5.1E-25 T 14-10-2018 IPR012336 Thioredoxin-like fold VAB027_3043 b49ef370e278c5babccce8c7604edf27 250 Gene3D G3DSA:3.10.450.70 26 89 1.7E-19 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VAB027_1201 d2ba2148933f0c82a6877c29524c8bfb 153 SUPERFAMILY SSF46689 1 74 1.9E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAB027_1201 d2ba2148933f0c82a6877c29524c8bfb 153 Gene3D G3DSA:1.10.357.10 1 153 1.1E-61 T 14-10-2018 VAB027_1201 d2ba2148933f0c82a6877c29524c8bfb 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAB027_1866 d84ff37e5877e222a9d3835168514e16 109 Pfam PF11872 Protein of unknown function (DUF3392) 3 106 1.5E-39 T 14-10-2018 IPR021813 Protein of unknown function DUF3392 VAB027_995 c24f50ce928dd94f8a1c7c1a35d682e7 211 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 205 1.2E-52 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAB027_995 c24f50ce928dd94f8a1c7c1a35d682e7 211 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 210 29.555 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAB027_2928 e3fe8f48c3163a21bcf3de5473dcd186 334 Pfam PF02424 ApbE family 31 309 1.8E-87 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VAB027_2928 e3fe8f48c3163a21bcf3de5473dcd186 334 PIRSF PIRSF006268 1 333 7.1E-97 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VAB027_2928 e3fe8f48c3163a21bcf3de5473dcd186 334 SUPERFAMILY SSF143631 23 332 5.23E-105 T 14-10-2018 IPR003374 ApbE-like superfamily VAB027_2928 e3fe8f48c3163a21bcf3de5473dcd186 334 Gene3D G3DSA:3.10.520.20 18 334 1.4E-115 T 14-10-2018 VAB027_3589 4581a9405dc1f054682a1603981025a5 404 Pfam PF00534 Glycosyl transferases group 1 214 364 1.2E-8 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VAB027_3589 4581a9405dc1f054682a1603981025a5 404 Gene3D G3DSA:3.40.50.2000 193 386 2.4E-14 T 14-10-2018 VAB027_3589 4581a9405dc1f054682a1603981025a5 404 Gene3D G3DSA:3.40.50.2000 85 388 2.4E-14 T 14-10-2018 VAB027_3589 4581a9405dc1f054682a1603981025a5 404 SUPERFAMILY SSF53756 5 397 1.26E-19 T 14-10-2018 VAB027_3012 a3ac6a9e6d97d8cd3d4e6a7e486faece 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 4.7E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAB027_2499 e5cc0f268c08f4fe162b84d703d76bc4 258 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 1.9E-47 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAB027_1316 be772aa0775e8f880cf5a28e369b5995 237 Pfam PF10986 Protein of unknown function (DUF2796) 33 150 8.4E-29 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VAB027_1316 be772aa0775e8f880cf5a28e369b5995 237 Pfam PF10986 Protein of unknown function (DUF2796) 148 233 8.5E-20 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VAB027_698 7126e767bb0bcd7ca1a306043099977c 80 SUPERFAMILY SSF47598 4 45 2.33E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAB027_698 7126e767bb0bcd7ca1a306043099977c 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 1.7E-31 T 14-10-2018 IPR022789 Antitoxin ParD VAB027_698 7126e767bb0bcd7ca1a306043099977c 80 Gene3D G3DSA:1.10.8.1250 10 79 2.1E-26 T 14-10-2018 IPR038296 Antitoxin ParD superfamily VAB027_698 7126e767bb0bcd7ca1a306043099977c 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 79 1.6E-42 T 14-10-2018 IPR022789 Antitoxin ParD VAB027_839 a42e5995fc0d75b894b383447abe2735 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 5.4E-146 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAB027_839 a42e5995fc0d75b894b383447abe2735 442 PIRSF PIRSF004539 1 441 7.4E-182 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAB027_839 a42e5995fc0d75b894b383447abe2735 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.1E-148 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAB027_713 8c4373179d951d42816081ec03b0bd13 178 Pfam PF06042 Nucleotidyltransferase 20 176 1.8E-57 T 14-10-2018 IPR009267 Putative nucleotidyltransferase VAB027_2284 416764f91754601d60dab8ffb427dcdf 133 Gene3D G3DSA:3.10.450.40 68 123 3.6E-6 T 14-10-2018 VAB027_3730 c21f18297efc90a82ad5219a181f1638 144 Pfam PF00258 Flavodoxin 4 136 2.7E-22 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAB027_3730 c21f18297efc90a82ad5219a181f1638 144 SUPERFAMILY SSF52218 2 144 7.75E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_3730 c21f18297efc90a82ad5219a181f1638 144 Gene3D G3DSA:3.40.50.360 1 144 8.5E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_595 211dd6c8a6daff75190c6442be6fe929 356 Pfam PF13729 F plasmid transfer operon, TraF, protein 15 272 4.2E-79 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VAB027_3457 ecea5e003ec96f6cc445baed09fd2d15 153 Gene3D G3DSA:3.40.1550.10 1 153 3.5E-45 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_3457 ecea5e003ec96f6cc445baed09fd2d15 153 SUPERFAMILY SSF103039 1 153 1.31E-37 T 14-10-2018 IPR028976 CheC-like superfamily VAB027_3457 ecea5e003ec96f6cc445baed09fd2d15 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 7.5E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VAB027_2957 28b2443207f11df7b4fda871daa465e3 322 Gene3D G3DSA:1.50.10.150 5 319 8.1E-42 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VAB027_2957 28b2443207f11df7b4fda871daa465e3 322 Pfam PF03595 Voltage-dependent anion channel 19 307 8.8E-30 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VAB027_2304 090096713b3e554caf60990d47938f12 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 385 2.4E-12 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VAB027_975 c15fcb955ae3e9c37afe493a97a928b8 94 SUPERFAMILY SSF55729 4 90 2.7E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_975 c15fcb955ae3e9c37afe493a97a928b8 94 Pfam PF14542 GCN5-related N-acetyl-transferase 15 90 4.7E-23 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VAB027_975 c15fcb955ae3e9c37afe493a97a928b8 94 Gene3D G3DSA:3.40.630.30 2 93 1.2E-23 T 14-10-2018 VAB027_11 334b09828fb998ee000e743954402262 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 3.5E-20 T 14-10-2018 IPR001727 Gdt1 family VAB027_11 334b09828fb998ee000e743954402262 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.6E-20 T 14-10-2018 IPR001727 Gdt1 family VAB027_2520 54548f64fd6cc0df60ddc530785f3402 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.924 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VAB027_2520 54548f64fd6cc0df60ddc530785f3402 257 SUPERFAMILY SSF53448 3 246 2.48E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_2520 54548f64fd6cc0df60ddc530785f3402 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 8.3E-116 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VAB027_2520 54548f64fd6cc0df60ddc530785f3402 257 Pfam PF02348 Cytidylyltransferase 5 221 1.1E-65 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VAB027_2520 54548f64fd6cc0df60ddc530785f3402 257 Gene3D G3DSA:3.90.550.10 1 252 6.8E-100 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_1312 427bc9cb9be3054a5c14167b1288a950 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 6.8E-110 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VAB027_1312 427bc9cb9be3054a5c14167b1288a950 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 2.8E-86 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VAB027_335 0028e756c3d79845fcd9b1efe71650f8 247 SUPERFAMILY SSF89392 46 193 6.28E-5 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VAB027_335 0028e756c3d79845fcd9b1efe71650f8 247 PIRSF PIRSF028205 1 245 8.6E-110 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VAB027_335 0028e756c3d79845fcd9b1efe71650f8 247 Pfam PF17131 Outer membrane lipoprotein-sorting protein 69 240 3.0E-35 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VAB027_335 0028e756c3d79845fcd9b1efe71650f8 247 Gene3D G3DSA:2.50.20.10 20 242 7.1E-38 T 14-10-2018 VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 297 1.8E-39 T 14-10-2018 IPR000160 GGDEF domain VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 SUPERFAMILY SSF55785 17 132 2.09E-8 T 14-10-2018 IPR035965 PAS domain superfamily VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 294 1.8E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 SMART SM00267 127 299 7.9E-44 T 14-10-2018 IPR000160 GGDEF domain VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 SUPERFAMILY SSF55073 143 298 2.82E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 Gene3D G3DSA:3.30.450.20 6 135 1.8E-10 T 14-10-2018 VAB027_179 0eeb4f9710c0fae5ea35591abdf309a0 319 Gene3D G3DSA:3.30.70.270 136 302 2.4E-46 T 14-10-2018 VAB027_52 ad38f5e0c6c7f6e769b870dbff45dfc5 126 TIGRFAM TIGR00494 crcB: protein CrcB 9 120 1.5E-28 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VAB027_52 ad38f5e0c6c7f6e769b870dbff45dfc5 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 19.083 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VAB027_52 ad38f5e0c6c7f6e769b870dbff45dfc5 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 119 1.2E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VAB027_2445 7b7b483bed9e78ee6ffb35cf8454c96e 128 Gene3D G3DSA:2.40.50.200 31 126 6.5E-6 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VAB027_2445 7b7b483bed9e78ee6ffb35cf8454c96e 128 SUPERFAMILY SSF101756 41 123 1.19E-6 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VAB027_1199 af96d350bd2c316808c690b7f71997ef 198 Gene3D G3DSA:3.80.10.10 9 194 1.8E-8 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VAB027_763 906db6ab6168f9cde240a74a16797ece 166 Pfam PF03358 NADPH-dependent FMN reductase 1 115 2.9E-22 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VAB027_763 906db6ab6168f9cde240a74a16797ece 166 Gene3D G3DSA:3.40.50.360 1 166 6.3E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_763 906db6ab6168f9cde240a74a16797ece 166 SUPERFAMILY SSF52218 1 163 1.32E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VAB027_932 081ce74d51aebe9a383ff10504f8ce38 238 Gene3D G3DSA:3.90.79.10 3 158 4.0E-22 T 14-10-2018 VAB027_932 081ce74d51aebe9a383ff10504f8ce38 238 SUPERFAMILY SSF55811 2 156 5.49E-14 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAB027_1174 2727e52371da35a1dbe1010fba7e466e 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 99 189 2.4E-20 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VAB027_1174 2727e52371da35a1dbe1010fba7e466e 202 SMART SM00702 13 189 2.4E-47 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VAB027_1174 2727e52371da35a1dbe1010fba7e466e 202 Gene3D G3DSA:2.60.120.620 3 193 5.0E-54 T 14-10-2018 VAB027_2426 3d396c2e1ea2ed0ea7d26bf134d3f9e5 162 Gene3D G3DSA:1.25.40.10 7 155 7.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2426 3d396c2e1ea2ed0ea7d26bf134d3f9e5 162 SUPERFAMILY SSF48452 35 135 7.59E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_251 5eef3a128bfb8287989437c9859daaba 84 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 1.1E-36 T 14-10-2018 IPR022072 Protein of unknown function DUF3624 VAB027_122 df3a14e0c86031663d37cbcc0836598c 207 Pfam PF07947 YhhN family 26 204 6.0E-33 T 14-10-2018 IPR012506 YhhN-like GO:0016021 VAB027_902 4cba6f88224ed4cd2df996ce0d13299d 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 6.1E-54 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAB027_3293 799aed8d21ffca4467cb064be3711123 86 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 86 34.98 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VAB027_3293 799aed8d21ffca4467cb064be3711123 86 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 83 2.5E-26 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAB027_3293 799aed8d21ffca4467cb064be3711123 86 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 3.3E-20 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 Gene3D G3DSA:2.40.420.20 28 324 9.1E-62 T 14-10-2018 VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 SUPERFAMILY SSF111369 37 268 4.05E-27 T 14-10-2018 VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 Gene3D G3DSA:1.10.287.470 87 154 9.1E-62 T 14-10-2018 VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 Gene3D G3DSA:2.40.30.170 37 267 9.1E-62 T 14-10-2018 VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 Gene3D G3DSA:2.40.50.100 49 189 9.1E-62 T 14-10-2018 VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 261 3.4E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAB027_527 98385b4eaf62f948c4cc47061ab6e969 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 328 1.9E-61 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAB027_3584 fdc606eca058d8143a3e24016b7886e6 412 Pfam PF00924 Mechanosensitive ion channel 143 397 1.9E-52 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAB027_3584 fdc606eca058d8143a3e24016b7886e6 412 SUPERFAMILY SSF50182 187 252 1.18E-10 T 14-10-2018 IPR010920 LSM domain superfamily VAB027_3584 fdc606eca058d8143a3e24016b7886e6 412 SUPERFAMILY SSF82689 326 394 6.28E-5 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VAB027_1711 02caae5827b0a27876b350c78cac3fb9 153 Gene3D G3DSA:3.90.1170.40 1 149 9.1E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VAB027_1711 02caae5827b0a27876b350c78cac3fb9 153 Pfam PF02391 MoaE protein 7 120 1.6E-37 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VAB027_1711 02caae5827b0a27876b350c78cac3fb9 153 SUPERFAMILY SSF54690 4 149 5.36E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VAB027_1536 001c294a0f940ca46b94225721bb76ac 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 518 1.3E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_1536 001c294a0f940ca46b94225721bb76ac 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 514 5.1E-36 T 14-10-2018 IPR000160 GGDEF domain VAB027_1536 001c294a0f940ca46b94225721bb76ac 521 SMART SM00267 351 521 3.0E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_1536 001c294a0f940ca46b94225721bb76ac 521 Gene3D G3DSA:3.30.70.270 358 521 4.9E-41 T 14-10-2018 VAB027_1536 001c294a0f940ca46b94225721bb76ac 521 SUPERFAMILY SSF55073 366 519 1.02E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_3253 865d7b869f756747fde5bf825a6fe297 167 SUPERFAMILY SSF55083 1 159 1.31E-54 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3253 865d7b869f756747fde5bf825a6fe297 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3253 865d7b869f756747fde5bf825a6fe297 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.6E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3253 865d7b869f756747fde5bf825a6fe297 167 Gene3D G3DSA:3.30.70.560 1 159 1.2E-57 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_3253 865d7b869f756747fde5bf825a6fe297 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.7E-45 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAB027_390 c57e1c0aba4156e07bea2caeb546468c 549 SUPERFAMILY SSF52540 229 409 2.58E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_390 c57e1c0aba4156e07bea2caeb546468c 549 Pfam PF09818 Predicted ATPase of the ABC class 2 436 6.3E-183 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative VAB027_2977 1bd44d61a8ba391fec504fbe682aa357 207 Pfam PF10144 Bacterial virulence factor haemolysin 6 151 3.6E-44 T 14-10-2018 IPR019305 Uncharacterised protein family Smp VAB027_2400 9abb2ba5378c97d30c43676df744e2a3 77 Pfam PF01313 Bacterial export proteins, family 3 3 71 1.4E-9 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAB027_1582 6c272b4bf474c74a0339ba729a038554 521 Gene3D G3DSA:3.40.50.300 7 193 5.6E-31 T 14-10-2018 VAB027_1582 6c272b4bf474c74a0339ba729a038554 521 Gene3D G3DSA:3.30.420.240 297 472 1.2E-9 T 14-10-2018 VAB027_1582 6c272b4bf474c74a0339ba729a038554 521 Pfam PF03237 Terminase-like family 29 258 4.6E-5 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type VAB027_1582 6c272b4bf474c74a0339ba729a038554 521 PIRSF PIRSF007056 1 511 3.1E-234 T 14-10-2018 IPR012036 Bacteriophage Mu, Gp28 VAB027_1475 5978d25bbbf2ea1b39e25ff313b56bda 147 Pfam PF10980 Protein of unknown function (DUF2787) 16 144 3.1E-51 T 14-10-2018 IPR021248 Protein of unknown function DUF2787 VAB027_1475 5978d25bbbf2ea1b39e25ff313b56bda 147 Gene3D G3DSA:3.10.450.430 1 146 3.9E-57 T 14-10-2018 VAB027_1160 03dfc7e513b157b2924e77ac83b14d00 391 Gene3D G3DSA:3.30.70.270 186 366 5.1E-50 T 14-10-2018 VAB027_1160 03dfc7e513b157b2924e77ac83b14d00 391 SMART SM00267 181 361 5.4E-54 T 14-10-2018 IPR000160 GGDEF domain VAB027_1160 03dfc7e513b157b2924e77ac83b14d00 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 357 6.5E-40 T 14-10-2018 IPR000160 GGDEF domain VAB027_1160 03dfc7e513b157b2924e77ac83b14d00 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 360 2.4E-41 T 14-10-2018 IPR000160 GGDEF domain VAB027_1160 03dfc7e513b157b2924e77ac83b14d00 391 SUPERFAMILY SSF55073 197 363 1.57E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_200 c08a812e6defbac13365b0110f27cb4d 161 Pfam PF04186 FxsA cytoplasmic membrane protein 8 113 1.6E-35 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VAB027_872 6b61326b33b8bb162ce297594c48ba43 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 9.4E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VAB027_872 6b61326b33b8bb162ce297594c48ba43 160 Gene3D G3DSA:2.40.440.10 13 160 3.0E-14 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAB027_872 6b61326b33b8bb162ce297594c48ba43 160 SUPERFAMILY SSF141523 24 158 4.05E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.7E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.7E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.7E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.7E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.7E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.7E-137 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 7.7E-119 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 SUPERFAMILY SSF160544 250 355 2.88E-38 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VAB027_2752 2371e209a6bbb249e0de3e322426fded 376 Gene3D G3DSA:3.40.1690.10 218 359 1.1E-55 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VAB027_3248 c05ab12ff731c0da4fde7c3a65ee7efc 441 SUPERFAMILY SSF53474 47 238 2.97E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_3248 c05ab12ff731c0da4fde7c3a65ee7efc 441 Pfam PF12697 Alpha/beta hydrolase family 69 352 5.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_1985 21931ec1696643209c052d793ac4c8d8 191 Gene3D G3DSA:3.40.630.30 13 190 3.5E-44 T 14-10-2018 VAB027_1985 21931ec1696643209c052d793ac4c8d8 191 Pfam PF13302 Acetyltransferase (GNAT) domain 18 160 9.8E-19 T 14-10-2018 IPR000182 GNAT domain VAB027_1985 21931ec1696643209c052d793ac4c8d8 191 SUPERFAMILY SSF55729 13 185 1.25E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_1200 fe0fbe153ae57f84c396ef10a2e140f7 100 Gene3D G3DSA:3.30.70.860 1 100 2.0E-45 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VAB027_1200 fe0fbe153ae57f84c396ef10a2e140f7 100 Pfam PF04175 Protein of unknown function (DUF406) 8 96 1.7E-28 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VAB027_3194 29a8cbebc5c3c6455ec1c29792545993 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAB027_3194 29a8cbebc5c3c6455ec1c29792545993 337 Pfam PF01136 Peptidase family U32 75 336 1.8E-70 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAB027_3256 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_3256 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_3256 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_3256 021be6b09b391dc380864082c8f66045 256 Pfam PF01061 ABC-2 type transporter 8 218 5.8E-40 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VAB027_3256 021be6b09b391dc380864082c8f66045 256 PIRSF PIRSF006648 8 252 1.2E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAB027_1096 7a532cf08b096ca18ac9043bb1f92c02 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 2.1E-36 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 VAB027_1968 b910bf95ecca8a3026cec7c56b10bfd0 233 Pfam PF00929 Exonuclease 45 214 2.3E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_1968 b910bf95ecca8a3026cec7c56b10bfd0 233 Gene3D G3DSA:3.30.420.10 39 221 2.2E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_1968 b910bf95ecca8a3026cec7c56b10bfd0 233 SUPERFAMILY SSF53098 37 221 6.15E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_1968 b910bf95ecca8a3026cec7c56b10bfd0 233 SMART SM00479 43 223 2.3E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAB027_269 0c1c36c60607992df5c62776c7e0c9dc 869 SUPERFAMILY SSF74853 39 132 2.75E-6 T 14-10-2018 IPR036415 Lamin tail domain superfamily VAB027_269 0c1c36c60607992df5c62776c7e0c9dc 869 Pfam PF00932 Lamin Tail Domain 26 134 4.5E-15 T 14-10-2018 IPR001322 Lamin tail domain VAB027_269 0c1c36c60607992df5c62776c7e0c9dc 869 SUPERFAMILY SSF56219 473 845 7.34E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAB027_1805 a5cd674f48dd25029a10c13013e65842 178 Pfam PF16036 Chalcone isomerase-like 37 174 3.0E-9 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 VAB027_2501 6ef7046434ad766386c20fe314eb17f7 61 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 1.2E-24 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VAB027_2943 50bafefac0d55f9f7c2d623d43ec8ae2 260 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 260 1.0E-98 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VAB027_2943 50bafefac0d55f9f7c2d623d43ec8ae2 260 Gene3D G3DSA:2.40.230.20 23 260 6.5E-78 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VAB027_2943 50bafefac0d55f9f7c2d623d43ec8ae2 260 SUPERFAMILY SSF111364 30 260 1.11E-85 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VAB027_486 23a3755bc7997036c105115e433cf5d5 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 1.1E-262 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 VAB027_486 23a3755bc7997036c105115e433cf5d5 591 SUPERFAMILY SSF53474 226 527 1.2E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_486 23a3755bc7997036c105115e433cf5d5 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 2.6E-73 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VAB027_486 23a3755bc7997036c105115e433cf5d5 591 Gene3D G3DSA:3.40.50.1820 226 409 1.3E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_340 94ea3d2e65af44f258159de929651cb8 326 SMART SM00267 133 303 3.5E-37 T 14-10-2018 IPR000160 GGDEF domain VAB027_340 94ea3d2e65af44f258159de929651cb8 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 1.0E-34 T 14-10-2018 IPR000160 GGDEF domain VAB027_340 94ea3d2e65af44f258159de929651cb8 326 Gene3D G3DSA:3.30.70.270 142 316 1.2E-46 T 14-10-2018 VAB027_340 94ea3d2e65af44f258159de929651cb8 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 143 302 3.5E-34 T 14-10-2018 IPR000160 GGDEF domain VAB027_340 94ea3d2e65af44f258159de929651cb8 326 SUPERFAMILY SSF55073 149 304 2.35E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VAB027_2748 bae4e0b244875c51e4f2ac0f1d30a75c 207 Pfam PF03458 UPF0126 domain 5 79 2.9E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VAB027_2748 bae4e0b244875c51e4f2ac0f1d30a75c 207 Pfam PF03458 UPF0126 domain 92 163 2.2E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VAB027_664 c96d6ed079f62eb8a692245ff00d5e6c 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.0E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_664 c96d6ed079f62eb8a692245ff00d5e6c 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 89 1.1E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAB027_664 c96d6ed079f62eb8a692245ff00d5e6c 92 Gene3D G3DSA:3.30.2310.20 1 90 1.8E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAB027_2368 304f14617c4831c648c0c61c60cad1f4 229 Pfam PF09335 SNARE associated Golgi protein 65 181 3.3E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein VAB027_1347 40742cd5c88a9212cf05cfb0afb48e94 212 Pfam PF05494 MlaC protein 34 199 5.0E-48 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VAB027_1347 40742cd5c88a9212cf05cfb0afb48e94 212 Gene3D G3DSA:3.10.450.710 25 204 2.5E-40 T 14-10-2018 VAB027_1347 40742cd5c88a9212cf05cfb0afb48e94 212 PIRSF PIRSF004649 1 211 4.0E-57 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VAB027_719 754ee31b5efe6796a33d2e57a86e4f4c 120 Pfam PF13642 protein structure with unknown function 20 118 4.0E-32 T 14-10-2018 IPR025284 Protein of unknown function DUF4144 VAB027_1410 00840c868af356928fbf6d015262827b 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 5.8E-35 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VAB027_1410 00840c868af356928fbf6d015262827b 64 SUPERFAMILY SSF140319 1 62 2.62E-28 T 14-10-2018 IPR036762 IscX-like superfamily VAB027_1410 00840c868af356928fbf6d015262827b 64 PIRSF PIRSF039003 1 64 4.8E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VAB027_1410 00840c868af356928fbf6d015262827b 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 7.7E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VAB027_1410 00840c868af356928fbf6d015262827b 64 Gene3D G3DSA:1.10.10.600 1 64 8.5E-30 T 14-10-2018 IPR036762 IscX-like superfamily VAB027_753 db764aed1207ed71e442da6f2ec5f9c8 244 Pfam PF15524 Novel toxin 17 169 232 1.1E-7 T 14-10-2018 IPR029117 Novel toxin 17 VAB027_601 32d92c68453fb67d28b4e1c6858935cd 92 Pfam PF10115 Transcriptional activator HlyU 2 91 2.7E-38 T 14-10-2018 IPR018772 Transcription activator HlyU VAB027_426 9bb93ff37875d79fc3493c2e5cd15434 384 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 31 359 7.0E-16 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB VAB027_426 9bb93ff37875d79fc3493c2e5cd15434 384 Gene3D G3DSA:1.20.1250.20 10 191 2.5E-16 T 14-10-2018 VAB027_426 9bb93ff37875d79fc3493c2e5cd15434 384 Gene3D G3DSA:1.20.1250.20 199 380 1.3E-13 T 14-10-2018 VAB027_426 9bb93ff37875d79fc3493c2e5cd15434 384 SUPERFAMILY SSF103473 15 375 6.93E-38 T 14-10-2018 IPR036259 MFS transporter superfamily VAB027_1646 e407b2d602906750edb8172b62d74ee0 156 Pfam PF07295 Zinc-ribbon containing domain 14 153 2.3E-49 T 14-10-2018 IPR009912 Zinc-ribbon containing domain VAB027_2531 367b1b8d0079c10b09f8f38a0cbd1747 254 Pfam PF10972 Peptidoglycan-binding protein, CsiV 7 252 2.7E-62 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VAB027_2161 4cc0057a9cb51eaf689c3d1422cc3bf3 218 Pfam PF02613 Nitrate reductase delta subunit 44 164 1.1E-34 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VAB027_2161 4cc0057a9cb51eaf689c3d1422cc3bf3 218 Gene3D G3DSA:1.10.3480.10 2 202 3.9E-45 T 14-10-2018 VAB027_2161 4cc0057a9cb51eaf689c3d1422cc3bf3 218 SUPERFAMILY SSF89155 9 199 2.88E-55 T 14-10-2018 IPR036411 TorD-like superfamily VAB027_3266 74887b1693742594d498bafea2b4e96a 189 SMART SM00749 50 113 14.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VAB027_3266 74887b1693742594d498bafea2b4e96a 189 SMART SM00749 127 189 0.0016 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VAB027_3266 74887b1693742594d498bafea2b4e96a 189 Pfam PF04972 BON domain 46 112 2.9E-9 T 14-10-2018 IPR007055 BON domain VAB027_3266 74887b1693742594d498bafea2b4e96a 189 Pfam PF04972 BON domain 122 188 5.9E-16 T 14-10-2018 IPR007055 BON domain VAB027_3580 e3df4a3b9fe543dd7da21d8750d754fa 733 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 43 718 5.5E-245 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VAB027_853 ee1385bd30ba4575db67dc6f953e83a9 75 Pfam PF03889 Domain of unknown function 23 59 9.6E-22 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 VAB027_2007 9a88e312f0f78d05caa67b6fe80b062c 212 Gene3D G3DSA:2.40.160.20 26 212 1.7E-10 T 14-10-2018 VAB027_2007 9a88e312f0f78d05caa67b6fe80b062c 212 SUPERFAMILY SSF56925 60 211 2.88E-9 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAB027_2007 9a88e312f0f78d05caa67b6fe80b062c 212 Pfam PF13505 Outer membrane protein beta-barrel domain 8 211 1.3E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VAB027_1026 937ba4024bba53668f226f336575fdf6 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 3.2E-4 T 14-10-2018 VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 Pfam PF00106 short chain dehydrogenase 7 198 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAB027_1026 937ba4024bba53668f226f336575fdf6 265 Gene3D G3DSA:3.40.50.720 1 262 4.0E-52 T 14-10-2018 VAB027_1026 937ba4024bba53668f226f336575fdf6 265 SUPERFAMILY SSF51735 1 261 3.66E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VAB027_2451 355d3a19650719da3ab43cbba1ffb81e 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 150 1.5E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VAB027_2357 5f052387df1dec5d08774ac9d4d94a10 194 Pfam PF01810 LysE type translocator 17 187 2.1E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_2346 9313200bda0b4a6df7948b9344370613 181 Pfam PF04279 Intracellular septation protein A 1 174 6.2E-69 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAB027_2346 9313200bda0b4a6df7948b9344370613 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.7E-64 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAB027_2346 9313200bda0b4a6df7948b9344370613 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.531 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAB027_832 b756f060b7bd679a2c5dfe87b67d8c83 526 Pfam PF03553 Na+/H+ antiporter family 165 491 3.9E-94 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAB027_2459 fd5cf02dca0f7ce9c0034f4b39177293 330 Pfam PF13280 WYL domain 152 326 3.6E-31 T 14-10-2018 IPR026881 WYL domain VAB027_3621 a4827d4dbd5e40601440ace861604ec1 314 Pfam PF07507 WavE lipopolysaccharide synthesis 9 307 1.3E-111 T 14-10-2018 IPR011122 WavE lipopolysaccharide synthesis VAB027_736 918b71011a3bad034bd6d840663fa21c 185 Gene3D G3DSA:3.40.630.30 2 162 4.3E-45 T 14-10-2018 VAB027_736 918b71011a3bad034bd6d840663fa21c 185 SUPERFAMILY SSF55729 2 159 3.29E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAB027_736 918b71011a3bad034bd6d840663fa21c 185 Pfam PF13302 Acetyltransferase (GNAT) domain 7 149 8.0E-35 T 14-10-2018 IPR000182 GNAT domain VAB027_3750 d1d901e693fb8f685e88fc8e3b990828 1147 Pfam PF07916 TraG-like protein, N-terminal region 6 465 1.5E-95 T 14-10-2018 IPR012931 TraG-like, N-terminal VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 SUPERFAMILY SSF53686 4 309 9.43E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 Gene3D G3DSA:3.40.50.1100 43 145 8.0E-125 T 14-10-2018 VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.5E-142 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 Gene3D G3DSA:3.40.50.1100 12 306 8.0E-125 T 14-10-2018 VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 4.6E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAB027_1656 2ca8dde79ba0c23b7902b81dfa04e056 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.0E-135 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAB027_2176 4c2c5f010c8008525c376127b7472dee 245 Pfam PF03942 DTW domain 29 215 1.1E-39 T 14-10-2018 IPR005636 DTW VAB027_2176 4c2c5f010c8008525c376127b7472dee 245 SMART SM01144 27 221 3.9E-63 T 14-10-2018 IPR005636 DTW VAB027_796 d0169784b8eabf57d4b3a0d81c9587c0 276 Pfam PF11060 Protein of unknown function (DUF2861) 36 276 4.2E-70 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 VAB027_3022 a7eed18b3b6aa854d7b1fd31602fce34 157 Pfam PF05258 Protein of unknown function (DUF721) 11 89 1.5E-11 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VAB027_1224 59c258eaf3be3be1ce296a50f29652f3 470 Pfam PF03929 PepSY-associated TM region 23 407 1.1E-64 T 14-10-2018 IPR005625 PepSY-associated TM protein VAB027_1254 7ef48e828f73e801b5fc55160c6ce8fa 167 Pfam PF03928 Haem-degrading 37 162 5.8E-26 T 14-10-2018 IPR005624 Haem-degrading VAB027_1254 7ef48e828f73e801b5fc55160c6ce8fa 167 SUPERFAMILY SSF143744 31 165 4.05E-34 T 14-10-2018 IPR038084 GlcG-like domain superfamily VAB027_1254 7ef48e828f73e801b5fc55160c6ce8fa 167 Gene3D G3DSA:3.30.450.150 24 167 1.8E-41 T 14-10-2018 IPR038084 GlcG-like domain superfamily VAB027_228 c7d0abc619a4939412373bdfd4e3d5a7 119 Pfam PF11333 Protein of unknown function (DUF3135) 14 93 4.5E-34 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 VAB027_3011 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 Pfam PF03458 UPF0126 domain 95 165 6.8E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VAB027_3011 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 Pfam PF03458 UPF0126 domain 8 81 3.7E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VAB027_2546 aa90f44c279651294810d7054856e879 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 3.1E-294 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VAB027_2546 aa90f44c279651294810d7054856e879 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 375.316 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VAB027_2546 aa90f44c279651294810d7054856e879 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 1.5E-299 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VAB027_2199 afd8154f7ae8c0468c7b7fe562c5fd46 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 2.3E-17 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAB027_2199 afd8154f7ae8c0468c7b7fe562c5fd46 120 SUPERFAMILY SSF55298 1 116 1.57E-26 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAB027_2199 afd8154f7ae8c0468c7b7fe562c5fd46 120 Gene3D G3DSA:3.30.1330.40 1 119 5.2E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAB027_905 add41edd38ea50e17c2f339c383b4b43 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 2.4E-18 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VAB027_905 add41edd38ea50e17c2f339c383b4b43 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 5.0E-19 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VAB027_1433 dfa6d2ca8a3c7d643d45b4842f68b707 350 SUPERFAMILY SSF81345 19 344 1.57E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1433 dfa6d2ca8a3c7d643d45b4842f68b707 350 Pfam PF01032 FecCD transport family 34 344 2.1E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_1433 dfa6d2ca8a3c7d643d45b4842f68b707 350 Gene3D G3DSA:1.10.3470.10 20 348 3.8E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1481 c09d687a6a71af27c3c5f191dd6e8b54 823 Pfam PF08665 PglZ domain 534 719 3.4E-6 T 14-10-2018 IPR013973 PglZ domain VAB027_2218 5f5e1043d450bdb9fb716c6420f786bb 78 SUPERFAMILY SSF47336 2 76 2.88E-5 T 14-10-2018 IPR036736 ACP-like superfamily VAB027_409 e09a12997b8449bc31b4b006c67bb097 102 Gene3D G3DSA:1.10.760.10 20 102 5.9E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_409 e09a12997b8449bc31b4b006c67bb097 102 SUPERFAMILY SSF46626 6 101 1.25E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAB027_409 e09a12997b8449bc31b4b006c67bb097 102 Pfam PF00034 Cytochrome c 32 100 3.7E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAB027_2336 fa1041ed38a06b807dd10a937a683ea0 402 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 400 2.4E-156 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter VAB027_3069 e20b8b6a9e1044f8dd2db13dae16cd87 420 Pfam PF01384 Phosphate transporter family 26 407 5.8E-112 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VAB027_1927 10ecf9c41b2a5dae52f484c5a170b0ee 299 Pfam PF13084 Domain of unknown function (DUF3943) 136 245 8.3E-38 T 14-10-2018 IPR025079 Domain of unknown function DUF3943 VAB027_114 d4610eb91b022d56f53a7b736dc95d08 514 PIRSF PIRSF028175 1 514 1.2E-304 T 14-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 VAB027_1478 29a84efa34a71b6be4a0f0b6573afd6b 58 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 1.3E-25 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VAB027_1478 29a84efa34a71b6be4a0f0b6573afd6b 58 Gene3D G3DSA:1.10.238.160 2 58 1.7E-5 T 14-10-2018 VAB027_351 36abf36a60715ec28728571e0ae05330 315 Pfam PF00892 EamA-like transporter family 12 141 1.6E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_351 36abf36a60715ec28728571e0ae05330 315 Pfam PF00892 EamA-like transporter family 163 289 1.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAB027_351 36abf36a60715ec28728571e0ae05330 315 SUPERFAMILY SSF103481 200 293 3.66E-6 T 14-10-2018 VAB027_1386 d5c49bf4f54eb6940c88e0be6ecf6060 548 Gene3D G3DSA:1.10.3720.10 277 541 2.5E-30 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1386 d5c49bf4f54eb6940c88e0be6ecf6060 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 535 1.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAB027_1386 d5c49bf4f54eb6940c88e0be6ecf6060 548 SUPERFAMILY SSF161098 259 529 1.83E-34 T 14-10-2018 IPR035906 MetI-like superfamily VAB027_1386 d5c49bf4f54eb6940c88e0be6ecf6060 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 279 539 8.5E-76 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VAB027_2457 76e5c47cd6dc5cc4694ecc0217179452 157 Pfam PF01936 NYN domain 3 151 2.8E-40 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type VAB027_2457 76e5c47cd6dc5cc4694ecc0217179452 157 Gene3D G3DSA:3.40.50.1010 1 157 6.1E-55 T 14-10-2018 VAB027_730 cb768bfec522d869b3d927a62d45cd13 89 Pfam PF13711 Domain of unknown function (DUF4160) 11 74 2.1E-18 T 14-10-2018 IPR025427 Protein of unknown function DUF4160 VAB027_924 11a37c5007de3ed48ec4d75962d7aba0 94 Gene3D G3DSA:2.60.200.60 2 94 1.7E-42 T 14-10-2018 VAB027_924 11a37c5007de3ed48ec4d75962d7aba0 94 Pfam PF05488 PAAR motif 19 85 3.8E-19 T 14-10-2018 IPR008727 PAAR motif VAB027_1613 c366fc23e582cba4297052fa3ffcc931 469 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 317 454 1.6E-8 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VAB027_1613 c366fc23e582cba4297052fa3ffcc931 469 Pfam PF13440 Polysaccharide biosynthesis protein 27 310 7.5E-24 T 14-10-2018 VAB027_1886 1fa28edd01281c628c5481f7cf3dcf55 315 SUPERFAMILY SSF56935 26 281 4.27E-5 T 14-10-2018 VAB027_1886 1fa28edd01281c628c5481f7cf3dcf55 315 Pfam PF11383 Protein of unknown function (DUF3187) 5 314 5.0E-126 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 VAB027_887 c7f16ba97aa6d1c39692a1f10b1551f2 403 SUPERFAMILY SSF51905 2 294 1.42E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAB027_887 c7f16ba97aa6d1c39692a1f10b1551f2 403 Pfam PF01266 FAD dependent oxidoreductase 4 395 7.7E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAB027_2515 fb7d103ab54f600570d83b1faccc8da1 220 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 204 1.7E-7 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 VAB027_1420 d12f6ead1a0fd40ed2288d7edb753e4f 294 SUPERFAMILY SSF55186 122 272 2.62E-11 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VAB027_1590 e7e42dee4c59bb09053c9328a06b4795 144 Pfam PF07030 Protein of unknown function (DUF1320) 4 125 1.8E-32 T 14-10-2018 IPR009752 Bacteriophage Mu, Gp36 VAB027_2581 d7ab4cf5424c18b5b62635b0c020c889 206 Pfam PF01810 LysE type translocator 15 203 8.5E-26 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_2581 d7ab4cf5424c18b5b62635b0c020c889 206 PIRSF PIRSF006324 1 206 6.3E-43 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAB027_3456 e3dc4a5f878cd8aa7db895e5106725d0 154 Gene3D G3DSA:1.10.10.10 3 89 7.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAB027_3456 e3dc4a5f878cd8aa7db895e5106725d0 154 Gene3D G3DSA:3.30.1490.190 90 151 8.9E-17 T 14-10-2018 VAB027_3456 e3dc4a5f878cd8aa7db895e5106725d0 154 SUPERFAMILY SSF46785 12 144 1.59E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_3456 e3dc4a5f878cd8aa7db895e5106725d0 154 Pfam PF01475 Ferric uptake regulator family 20 138 4.7E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VAB027_3431 60f1729e3889cb92a5fc8c3998175356 216 Pfam PF04612 Type II secretion system (T2SS), protein M 6 99 2.0E-8 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VAB027_337 d4f11dc26e063788afe4bc47c8573ed4 359 SUPERFAMILY SSF55874 206 336 4.85E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_337 d4f11dc26e063788afe4bc47c8573ed4 359 SMART SM00387 244 342 2.2E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAB027_337 d4f11dc26e063788afe4bc47c8573ed4 359 Gene3D G3DSA:3.30.565.10 221 343 1.0E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAB027_337 d4f11dc26e063788afe4bc47c8573ed4 359 Pfam PF06580 Histidine kinase 151 229 1.8E-22 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VAB027_1617 bb4afa8abfc058e700746d804a7306f9 358 Gene3D G3DSA:3.40.50.2000 32 348 9.8E-59 T 14-10-2018 VAB027_1617 bb4afa8abfc058e700746d804a7306f9 358 Gene3D G3DSA:3.40.50.2000 167 339 9.8E-59 T 14-10-2018 VAB027_1617 bb4afa8abfc058e700746d804a7306f9 358 SUPERFAMILY SSF53756 49 357 1.22E-65 T 14-10-2018 VAB027_1617 bb4afa8abfc058e700746d804a7306f9 358 Pfam PF00534 Glycosyl transferases group 1 181 333 2.3E-36 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VAB027_928 2e3314e3d272cc64f7ba7e16b2190d2b 512 Gene3D G3DSA:3.20.20.450 256 503 9.6E-67 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_928 2e3314e3d272cc64f7ba7e16b2190d2b 512 Pfam PF00563 EAL domain 264 488 5.7E-56 T 14-10-2018 IPR001633 EAL domain VAB027_928 2e3314e3d272cc64f7ba7e16b2190d2b 512 SMART SM00052 255 493 4.9E-75 T 14-10-2018 IPR001633 EAL domain VAB027_928 2e3314e3d272cc64f7ba7e16b2190d2b 512 SUPERFAMILY SSF141868 262 500 6.28E-68 T 14-10-2018 IPR035919 EAL domain superfamily VAB027_1602 790f3851f8fd43a5df2b509fd5fe676c 355 Pfam PF04865 Baseplate J-like protein 66 319 3.2E-57 T 14-10-2018 IPR006949 Baseplate protein J-like VAB027_1188 467578398cc8c2433e93d1e96e8b5b06 90 SUPERFAMILY SSF54403 5 56 2.3E-5 T 14-10-2018 VAB027_2512 9bb088856caf0306e0956b0a2f9da17c 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 325 1.8E-85 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 VAB027_2512 9bb088856caf0306e0956b0a2f9da17c 328 Gene3D G3DSA:2.40.128.140 21 326 4.6E-56 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily VAB027_781 104e102ddb5d3ffbabab66b70812f079 115 Gene3D G3DSA:1.10.260.40 2 89 2.7E-13 T 14-10-2018 VAB027_781 104e102ddb5d3ffbabab66b70812f079 115 SUPERFAMILY SSF47413 3 83 5.07E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAB027_1649 3c3193c806975cc808332f05303e10ce 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 144 3.7E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VAB027_1649 3c3193c806975cc808332f05303e10ce 154 SUPERFAMILY SSF55486 3 149 1.37E-49 T 14-10-2018 VAB027_1649 3c3193c806975cc808332f05303e10ce 154 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 1.0E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VAB027_1649 3c3193c806975cc808332f05303e10ce 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.537 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VAB027_1649 3c3193c806975cc808332f05303e10ce 154 Gene3D G3DSA:3.40.390.30 1 154 1.5E-59 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VAB027_1649 3c3193c806975cc808332f05303e10ce 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VAB027_1957 87915a0cd8705166a669f252f7702b6f 101 SUPERFAMILY SSF52794 1 101 2.2E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAB027_1957 87915a0cd8705166a669f252f7702b6f 101 Gene3D G3DSA:3.40.50.2300 2 101 5.8E-39 T 14-10-2018 VAB027_1957 87915a0cd8705166a669f252f7702b6f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 1.4E-24 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAB027_792 171e4d3a0441daa0b8f139df620909c1 169 SUPERFAMILY SSF49503 59 167 1.12E-23 T 14-10-2018 IPR008972 Cupredoxin VAB027_792 171e4d3a0441daa0b8f139df620909c1 169 Gene3D G3DSA:2.60.40.420 53 169 1.2E-19 T 14-10-2018 IPR008972 Cupredoxin VAB027_439 1a5c80ae8796e022ef0d4fa40f343932 101 Gene3D G3DSA:3.40.1440.10 5 100 5.5E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAB027_439 1a5c80ae8796e022ef0d4fa40f343932 101 SUPERFAMILY SSF82771 10 81 7.06E-13 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAB027_439 1a5c80ae8796e022ef0d4fa40f343932 101 Pfam PF01541 GIY-YIG catalytic domain 11 83 1.2E-14 T 14-10-2018 IPR000305 GIY-YIG endonuclease VAB027_2575 0bf46bc20c01e74ec129ed0ce613d33e 156 SUPERFAMILY SSF56524 35 154 8.11E-10 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VAB027_2795 b49c3785f6f9883596e80364316c7cff 138 Pfam PF09842 Predicted membrane protein (DUF2069) 11 113 1.2E-33 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VAB027_1942 e27bffd07a30758bfaf9a43651ef2a22 335 Gene3D G3DSA:1.20.1420.20 34 335 3.3E-70 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VAB027_1942 e27bffd07a30758bfaf9a43651ef2a22 335 Pfam PF09375 Imelysin 35 311 8.5E-38 T 14-10-2018 IPR018976 Imelysin-like domain VAB027_582 f9cf215d75924dac76de5cbed9b6aace 263 Gene3D G3DSA:3.30.2010.10 46 140 4.1E-8 T 14-10-2018 VAB027_582 f9cf215d75924dac76de5cbed9b6aace 263 Pfam PF01435 Peptidase family M48 60 246 1.2E-46 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VAB027_613 3968d38666e9065242e85f3dbef7781b 188 Pfam PF08274 PhnA Zinc-Ribbon 13 52 3.4E-9 T 14-10-2018 IPR013987 PhnA protein, N-terminal VAB027_613 3968d38666e9065242e85f3dbef7781b 188 SMART SM00782 6 52 4.9E-28 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VAB027_613 3968d38666e9065242e85f3dbef7781b 188 Pfam PF03831 PhnA domain 123 187 4.3E-25 T 14-10-2018 IPR013988 PhnA protein, C-terminal VAB027_613 3968d38666e9065242e85f3dbef7781b 188 Gene3D G3DSA:2.30.30.40 119 188 4.5E-26 T 14-10-2018 VAB027_613 3968d38666e9065242e85f3dbef7781b 188 SUPERFAMILY SSF82057 117 187 1.51E-22 T 14-10-2018 VAB027_2333 b3151e978a25f693b86b8f325d280e14 255 Pfam PF11150 Protein of unknown function (DUF2927) 27 226 2.0E-63 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 VAB027_3469 16dfa509caf1be88edde5bb835bc149b 62 Gene3D G3DSA:1.10.10.1100 1 57 3.1E-19 T 14-10-2018 VAB027_3469 16dfa509caf1be88edde5bb835bc149b 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 3.8E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VAB027_2860 1089f771f25e41c86ff80281707d0f30 288 Pfam PF01963 TraB family 23 276 3.4E-54 T 14-10-2018 IPR002816 Pheromone shutdown, TraB VAB027_1782 95630eb6f886808a18cfbdbcea6f8882 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 7.0E-123 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein VAB027_1782 95630eb6f886808a18cfbdbcea6f8882 321 Gene3D G3DSA:3.40.50.2300 143 315 1.1E-107 T 14-10-2018 VAB027_1782 95630eb6f886808a18cfbdbcea6f8882 321 SUPERFAMILY SSF53822 43 275 5.55E-19 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VAB027_1782 95630eb6f886808a18cfbdbcea6f8882 321 Gene3D G3DSA:3.40.50.2300 46 292 1.1E-107 T 14-10-2018 VAB027_2291 3140e4ed0a198c0e5c70caf11c1c1cb2 396 Pfam PF11301 Protein of unknown function (DUF3103) 42 395 4.2E-182 T 14-10-2018 IPR021452 Protein of unknown function DUF3103 VAB027_503 3486787cc98d7d0cfedf83f69ca5af8b 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 1.4E-143 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VAB027_503 3486787cc98d7d0cfedf83f69ca5af8b 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 3.9E-132 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VAB027_268 f712a85afca0b8edc5bc8f9cce6bb1a5 254 SUPERFAMILY SSF53850 21 249 7.17E-22 T 14-10-2018 VAB027_268 f712a85afca0b8edc5bc8f9cce6bb1a5 254 Gene3D G3DSA:3.40.190.10 114 207 1.2E-11 T 14-10-2018 VAB027_268 f712a85afca0b8edc5bc8f9cce6bb1a5 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 248 1.0E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAB027_268 f712a85afca0b8edc5bc8f9cce6bb1a5 254 Gene3D G3DSA:3.40.190.10 31 241 1.2E-11 T 14-10-2018 VAB027_596 6fa53874b79f0b633d64569f1cbd921e 294 Pfam PF11060 Protein of unknown function (DUF2861) 26 289 4.9E-94 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 VAB027_2778 054baa497d3da9ecbca56ffc17a11fcd 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.6E-53 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 VAB027_1245 8cf3d8fcac3dec12eaba7fc39cc5a85a 272 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 3 271 5.3E-68 T 14-10-2018 IPR013464 Conserved hypothetical protein CHP02642 VAB027_2863 7578b1dada4d4c7fded382d4ad81aae9 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.0E-15 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 VAB027_3160 c4d3bc7fdf147f38de689b0fd6f478a3 107 Pfam PF10973 Protein of unknown function (DUF2799) 22 102 7.9E-23 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VAB027_2925 9b38d1da25ab0ed4d998122b986b7dfe 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 3.4E-68 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 VAB027_70 f41811c854fd87bff7a0c17b79982caa 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 34.875 T 14-10-2018 IPR019598 Universal stress protein B VAB027_70 f41811c854fd87bff7a0c17b79982caa 107 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.2E-51 T 14-10-2018 IPR019598 Universal stress protein B VAB027_518 11859820d7465cefef2ef67b828c9edd 248 Pfam PF05742 Transport and Golgi organisation 2 15 118 9.6E-6 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 VAB027_1321 9db25bea095068a24ad7628b8ec9cfeb 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 917 1253 4.1E-62 T 14-10-2018 IPR007452 Translocation and assembly module TamB VAB027_1084 442a938f34b1c60389189dc6649b9a14 143 PIRSF PIRSF028777 2 139 6.3E-54 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VAB027_1084 442a938f34b1c60389189dc6649b9a14 143 Pfam PF03733 Inner membrane component domain 77 127 1.0E-18 T 14-10-2018 IPR005185 Inner membrane component domain VAB027_1084 442a938f34b1c60389189dc6649b9a14 143 Pfam PF03733 Inner membrane component domain 5 54 3.3E-15 T 14-10-2018 IPR005185 Inner membrane component domain VAB027_3756 30b8560fdbee1d7e324b7cf17492caa1 72 Pfam PF12728 Helix-turn-helix domain 20 70 6.4E-10 T 14-10-2018 VAB027_3756 30b8560fdbee1d7e324b7cf17492caa1 72 SUPERFAMILY SSF46955 19 70 2.2E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VAB027_210 4360b85734712fbfabb29b92472d2739 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.054 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VAB027_210 4360b85734712fbfabb29b92472d2739 80 Gene3D G3DSA:1.20.5.340 1 79 2.4E-28 T 14-10-2018 VAB027_210 4360b85734712fbfabb29b92472d2739 80 Pfam PF06005 Cell division protein ZapB 1 77 1.0E-25 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VAB027_473 c27eab0cf584c5d4e8fa0e54b437c22f 205 Pfam PF07947 YhhN family 24 203 4.0E-51 T 14-10-2018 IPR012506 YhhN-like GO:0016021 VAB027_3196 a740b25dff729da7351a97df6cbd84b3 444 Pfam PF01554 MatE 15 176 1.6E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_3196 a740b25dff729da7351a97df6cbd84b3 444 Pfam PF01554 MatE 246 397 9.1E-11 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_3196 a740b25dff729da7351a97df6cbd84b3 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 4.7E-49 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_3196 a740b25dff729da7351a97df6cbd84b3 444 PIRSF PIRSF006603 1 440 8.7E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAB027_1583 d806b4e97c8ecf56bdbb67ba98d857dd 519 Pfam PF06074 Protein of unknown function (DUF935) 5 516 6.5E-174 T 14-10-2018 IPR009279 Protein of unknown function DUF935 VAB027_1572 98c0297053f00a3ec0d5353fa8fa1574 181 Pfam PF06252 Protein of unknown function (DUF1018) 17 141 5.8E-30 T 14-10-2018 IPR009363 Bacteriophage Mu, Gp16 VAB027_3284 805c55af35823eab7be3067733dae812 264 Pfam PF01578 Cytochrome C assembly protein 37 262 2.0E-46 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VAB027_1434 d8003e04a974592d40994004435a6c6b 358 Gene3D G3DSA:1.10.3470.10 31 358 6.1E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1434 d8003e04a974592d40994004435a6c6b 358 SUPERFAMILY SSF81345 26 353 6.02E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VAB027_1434 d8003e04a974592d40994004435a6c6b 358 Pfam PF01032 FecCD transport family 45 353 3.7E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAB027_2109 aae72cf6af99b182db73b969bce70b61 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.5E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VAB027_2109 aae72cf6af99b182db73b969bce70b61 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 2 48 4.4E-15 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VAB027_3616 0f92cdb8149191ab6fb2a4fb8bffeaf0 260 Gene3D G3DSA:3.90.550.20 72 241 2.7E-16 T 14-10-2018 VAB027_3616 0f92cdb8149191ab6fb2a4fb8bffeaf0 260 SUPERFAMILY SSF53448 15 258 1.42E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAB027_3616 0f92cdb8149191ab6fb2a4fb8bffeaf0 260 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 71 154 5.3E-18 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif VAB027_1601 894202fecb50d2a0e5a634984c5718b9 149 Pfam PF07409 Phage protein GP46 26 140 1.5E-37 T 14-10-2018 IPR010877 Bacteriophage Mu, Gp46 VAB027_1593 236f8cad3dd3dc2a64a0cea5d6ee775c 66 Pfam PF10948 Protein of unknown function (DUF2635) 8 52 1.6E-16 T 14-10-2018 IPR024400 Protein of unknown function DUF2635 VAB027_1593 236f8cad3dd3dc2a64a0cea5d6ee775c 66 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 8 53 0.001 T 14-10-2018 IPR024400 Protein of unknown function DUF2635 VAB027_382 28eacf266f6d719fa2483152342a46e1 434 Pfam PF00294 pfkB family carbohydrate kinase 139 293 1.4E-9 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VAB027_382 28eacf266f6d719fa2483152342a46e1 434 SUPERFAMILY SSF53613 33 417 2.05E-43 T 14-10-2018 IPR029056 Ribokinase-like VAB027_695 e0f609aea0aa339eb8cf26cae7b3cd13 94 SUPERFAMILY SSF48431 6 90 3.14E-5 T 14-10-2018 IPR011030 Lipovitellin-phosvitin complex, superhelical domain Reactome: R-HSA-8866423|Reactome: R-HSA-8963888 VAB027_695 e0f609aea0aa339eb8cf26cae7b3cd13 94 Gene3D G3DSA:1.25.10.10 4 94 1.5E-8 T 14-10-2018 IPR011989 Armadillo-like helical VAB027_87 06fc9a6b98880fd9df4797d2ad555617 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 3.6E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VAB027_824 73dd08a6b52fa6c751f10b58ef3e28f1 312 Pfam PF00561 alpha/beta hydrolase fold 37 228 1.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAB027_824 73dd08a6b52fa6c751f10b58ef3e28f1 312 SUPERFAMILY SSF53474 32 309 5.65E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_824 73dd08a6b52fa6c751f10b58ef3e28f1 312 Gene3D G3DSA:3.40.50.1820 30 312 9.6E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VAB027_1107 41b24f639d37e3562c2c54f36e298d6f 83 Pfam PF11280 Protein of unknown function (DUF3081) 6 81 2.3E-29 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 VAB027_3749 f7582751fde590d4b7694560da067983 478 Pfam PF06122 Conjugative relaxosome accessory transposon protein 35 401 1.8E-93 T 14-10-2018 IPR010927 Type IV conjugative transfer system protein TraH VAB027_2518 8c5614edd334fea1d424fa00fd53b9a9 349 Pfam PF04285 Protein of unknown function (DUF444) 3 349 1.8E-157 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VAB027_1182 4799b3ec9acb58c3871e7ecebe395f3d 162 Pfam PF03061 Thioesterase superfamily 22 95 6.0E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAB027_1182 4799b3ec9acb58c3871e7ecebe395f3d 162 Gene3D G3DSA:3.10.129.10 2 160 1.4E-42 T 14-10-2018 VAB027_1182 4799b3ec9acb58c3871e7ecebe395f3d 162 SUPERFAMILY SSF54637 5 150 2.09E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VAB027_1117 0b966ee4ffd4adaa2b8a076df848183d 155 Pfam PF07670 Nucleoside recognition 31 124 9.2E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_3132 54f10992183a444584c0f0367b5b60f5 563 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 142 225 3.3E-13 T 14-10-2018 IPR013491 Caudovirus, tape measure, N-terminal VAB027_2163 62f56d917e1c02982cc4c4a5df3cf293 200 Pfam PF11748 Protein of unknown function (DUF3306) 7 113 1.9E-20 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 VAB027_2217 72b09f29e128434992fab92bcb3adc3f 273 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 273 1.8E-20 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAB027_811 140a4317990679e02fbcebed90ee1ad7 105 Gene3D G3DSA:2.40.360.20 5 88 1.3E-5 T 14-10-2018 VAB027_3563 8af77c7f8ac4a72b3e73da036d15e90c 225 Pfam PF16357 Putative PepSY_TM-like 33 219 2.7E-13 T 14-10-2018 IPR032307 Putative PepSY TM-like protein VAB027_3614 8f0110d9b84a1a0e8986fc10d6f5da94 242 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 178 2.0E-44 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 VAB027_519 4f4662e1e8b4d75327f396d698c20acc 148 Pfam PF04945 YHS domain 38 83 2.4E-15 T 14-10-2018 IPR007029 YHS domain VAB027_1578 ce91cc05b3e727d20c456ae3321eca77 76 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 43 74 6.1E-7 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VAB027_1578 ce91cc05b3e727d20c456ae3321eca77 76 Gene3D G3DSA:1.20.120.910 3 76 6.3E-12 T 14-10-2018 VAB027_1738 b5cb890561bbc839f51d242099503e65 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 60 2.0E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VAB027_2342 a49473da9a37daebade7d241867d7078 77 Pfam PF06146 Phosphate-starvation-inducible E 8 68 2.7E-12 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VAB027_2342 a49473da9a37daebade7d241867d7078 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.7E-39 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VAB027_1300 0e51f43497791e9b6cafd13a50d1f843 158 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 9 153 2.0E-33 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VAB027_1880 ac07908910191ccdc83f3b3fb13c6121 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 216 3.1E-97 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 VAB027_278 98ae38eeb16f4f0b5b9a39f1bdb68c95 116 Pfam PF00665 Integrase core domain 1 71 3.8E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAB027_278 98ae38eeb16f4f0b5b9a39f1bdb68c95 116 SUPERFAMILY SSF53098 1 110 2.88E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VAB027_278 98ae38eeb16f4f0b5b9a39f1bdb68c95 116 Gene3D G3DSA:3.30.420.10 1 111 4.0E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAB027_406 de289dff2e5f3c7023361b169c449b29 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.7E-28 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VAB027_406 de289dff2e5f3c7023361b169c449b29 193 PIRSF PIRSF011489 1 193 1.4E-85 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VAB027_1802 c4281855c95bcc0a6e7eb33858196ff4 269 Pfam PF07103 Protein of unknown function (DUF1365) 14 256 8.6E-70 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 VAB027_1488 3214050dcb961d56f47c64c53b977b34 31 Pfam PF13333 Integrase core domain 2 31 1.4E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAB027_2034 d541d459798e29a7d471e2496d6acd91 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.0E-44 T 14-10-2018 IPR006214 Bax inhibitor 1-related VAB027_2959 2622c25bfa14c1536c2279738ae17286 102 Pfam PF07130 YebG protein 1 72 1.7E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG VAB027_2959 2622c25bfa14c1536c2279738ae17286 102 Gene3D G3DSA:1.10.10.710 21 97 3.0E-8 T 14-10-2018 IPR038627 YebG-like superfamily VAB027_2686 80e8fe721a0fe7a68068a29eaec2373a 248 Pfam PF04333 MlaA lipoprotein 31 223 3.8E-64 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAB027_2686 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 51 67 8.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAB027_2686 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 102 119 8.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAB027_2686 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 139 156 8.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAB027_2686 80e8fe721a0fe7a68068a29eaec2373a 248 PRINTS PR01805 VacJ lipoprotein signature 33 46 8.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAB027_2763 e7d1614d8ffd6e4e25c6dff9f5f3ae0c 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 7.3E-9 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAB027_2763 e7d1614d8ffd6e4e25c6dff9f5f3ae0c 266 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 7.3E-9 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAB027_2763 e7d1614d8ffd6e4e25c6dff9f5f3ae0c 266 PRINTS PR01003 Flagellar assembly protein FliH signature 108 126 7.3E-9 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAB027_2763 e7d1614d8ffd6e4e25c6dff9f5f3ae0c 266 PRINTS PR01003 Flagellar assembly protein FliH signature 127 146 7.3E-9 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAB027_2763 e7d1614d8ffd6e4e25c6dff9f5f3ae0c 266 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 7.3E-9 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAB027_2763 e7d1614d8ffd6e4e25c6dff9f5f3ae0c 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 1.9E-34 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VAB027_3081 9c7e99a48747d577af151cf0bfa477e0 136 SUPERFAMILY SSF53850 16 123 1.16E-5 T 14-10-2018 VAB027_2927 b1cc3177487d44ef443f67d1a913e392 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.1E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VAB027_2323 ce06c26236039db469e32a24f3275172 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 4.4E-48 T 14-10-2018 IPR014320 Phage shock protein, PspC VAB027_2323 ce06c26236039db469e32a24f3275172 129 Pfam PF04024 PspC domain 4 61 5.6E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VAB027_2009 0599335e06215f53adf2328bc247198b 509 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 3.2E-141 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VAB027_998 f9a3fab419659d368986c4370b672bbe 318 Pfam PF03547 Membrane transport protein 169 307 1.9E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VAB027_1977 6618ba4c4ec1852cb408cfb9cf3197cc 417 Pfam PF01490 Transmembrane amino acid transporter protein 25 415 1.3E-7 T 14-10-2018 IPR013057 Amino acid transporter, transmembrane domain VAB027_1523 d8d12a259f5048326b3116c6c4f97bff 288 Pfam PF12069 Protein of unknown function (DUF3549) 3 286 3.5E-114 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 VAB027_1998 7048e64a0a66ba805a6edb2489b491c0 65 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 2.9E-22 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VAB027_1205 ed30ed571b4bdc38a08e0637444401ef 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 4.4E-21 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VAB027_1156 9f868f08f301fdfa818444ed049cea68 146 Pfam PF11012 Protein of unknown function (DUF2850) 38 116 3.0E-31 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VAB027_3657 9bf92cc1d216ad1556a9b42a61167d2b 183 SUPERFAMILY SSF46785 116 168 4.3E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAB027_626 22f1037ded62ab9f930d26e97ffd2725 224 Pfam PF09335 SNARE associated Golgi protein 48 172 1.8E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein VAB027_1595 6e07637432047391d832d7b46d96bdb1 117 Pfam PF10618 Phage tail tube protein 1 115 1.3E-27 T 14-10-2018 IPR019596 Bacteriophage Mu, GpM, tail tube VAB027_2784 3d4ba9f7d6ae6c128b00bb37f17b4390 70 Pfam PF11446 Protein of unknown function (DUF2897) 5 51 1.1E-17 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 VAB027_1101 a2ee08240a65728740d903237db7d0f6 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 1.7E-42 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 VAB027_3082 e844635629692a05bf120a1ddd1035b1 427 SUPERFAMILY SSF56935 28 427 9.68E-23 T 14-10-2018 VAB027_2540 99867843b66b55f23948961684fdd8f0 465 SUPERFAMILY SSF48452 59 259 1.97E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAB027_2104 c3cf1a6dfd3775b137c0e3a4e876b6ef 219 Pfam PF11205 Protein of unknown function (DUF2987) 22 165 7.7E-55 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 VAB027_3566 4a76bc2c8bdecc84e99465ee316d1624 445 Gene3D G3DSA:1.20.1740.10 1 438 2.2E-59 T 14-10-2018 VAB027_3566 4a76bc2c8bdecc84e99465ee316d1624 445 PIRSF PIRSF006060 1 433 1.3E-48 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_3566 4a76bc2c8bdecc84e99465ee316d1624 445 Pfam PF13520 Amino acid permease 8 421 1.7E-35 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAB027_1781 10252bcc19392a4d22cbb9052e5829e4 136 Gene3D G3DSA:1.10.720.30 19 78 1.2E-25 T 14-10-2018 IPR036361 SAP domain superfamily VAB027_1781 10252bcc19392a4d22cbb9052e5829e4 136 Pfam PF09905 DNA-binding protein VF530 11 73 2.3E-30 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VAB027_2696 2e601f0e842a02f8fcbcebf00585167c 159 Pfam PF10975 Protein of unknown function (DUF2802) 68 134 1.1E-22 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 VAB027_2747 84dfbdd9c6c1ad8462dc504675b0922f 176 Pfam PF04315 Elongation factor P hydroxylase 11 169 3.7E-74 T 14-10-2018 IPR007411 Elongation factor P hydroxylase VAB027_1623 6c6b20bbcd13279213969f74e513aef1 438 Pfam PF04932 O-Antigen ligase 217 359 1.6E-19 T 14-10-2018 IPR007016 O-antigen ligase-related VAB027_2002 ede7d6cff39b94bc6c38558b16bf9202 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 2.5E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAB027_1657 ac6aec25f92a82da4a257726975e1b50 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 28.223 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VAB027_1657 ac6aec25f92a82da4a257726975e1b50 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 6.2E-42 T 14-10-2018 VAB027_1950 7c7fdd55891368730d42eb7f1eb3d399 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 6.9E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VAB027_3645 a0d26e3462052f620de4add76fb3ec8b 81 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 26 75 1.8E-9 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VAB027_2483 6835d584631bfd821839a7c24c27a8e5 105 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 24 100 8.1E-31 T 14-10-2018 IPR011846 Cyd operon protein YbgE VAB027_2483 6835d584631bfd821839a7c24c27a8e5 105 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 12 103 4.6E-42 T 14-10-2018 IPR011846 Cyd operon protein YbgE VAB027_3162 2c8ebad8bab3f0d1f8121f06ee2d0f97 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.3E-97 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VAB027_3162 2c8ebad8bab3f0d1f8121f06ee2d0f97 316 Gene3D G3DSA:3.40.1010.20 97 198 9.2E-108 T 14-10-2018 VAB027_3162 2c8ebad8bab3f0d1f8121f06ee2d0f97 316 Gene3D G3DSA:3.40.50.11270 12 96 9.2E-108 T 14-10-2018 VAB027_3162 2c8ebad8bab3f0d1f8121f06ee2d0f97 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.967 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VAB027_3162 2c8ebad8bab3f0d1f8121f06ee2d0f97 316 Gene3D G3DSA:3.40.1010.20 6 283 9.2E-108 T 14-10-2018 VAB027_3162 2c8ebad8bab3f0d1f8121f06ee2d0f97 316 Pfam PF02401 LytB protein 3 284 2.4E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VAB027_2248 d90b5351ec09abc56d3efd8b64e28092 267 SUPERFAMILY SSF53850 36 246 2.53E-9 T 14-10-2018 VAB027_1023 c3ab78007c54e33be1ef59ce38e82b58 200 Pfam PF12261 Thermostable hemolysin 16 185 1.4E-59 T 14-10-2018 IPR022050 Thermostable hemolysin VAB027_3623 f51d67172c3cb19f28c291374a744e98 664 SUPERFAMILY SSF52266 534 660 1.45E-8 T 14-10-2018 VAB027_3623 f51d67172c3cb19f28c291374a744e98 664 Gene3D G3DSA:3.40.50.1110 522 664 1.7E-8 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VAB027_3623 f51d67172c3cb19f28c291374a744e98 664 Pfam PF01757 Acyltransferase family 7 334 5.4E-24 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VAB027_3733 f65153dc9b8a4c7bad5b95f1ecf5004c 329 SMART SM00382 123 255 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VAB027_3733 f65153dc9b8a4c7bad5b95f1ecf5004c 329 Gene3D G3DSA:3.40.50.300 81 268 6.0E-41 T 14-10-2018 VAB027_3733 f65153dc9b8a4c7bad5b95f1ecf5004c 329 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 127 252 2.6E-25 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAB027_3733 f65153dc9b8a4c7bad5b95f1ecf5004c 329 SUPERFAMILY SSF52540 86 322 2.07E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAB027_1911 1134084a1ec9d5f13c82e10c804380f0 224 Pfam PF04172 LrgB-like family 6 218 1.0E-73 T 14-10-2018 IPR007300 CidB/LrgB family VAB027_1688 10dc8b868a4240bf166a748d2005b14b 163 Pfam PF02674 Colicin V production protein 4 142 1.2E-35 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VAB027_3116 68366efc2c5f15e3149928986e884401 263 Pfam PF04784 Protein of unknown function, DUF547 86 198 1.7E-25 T 14-10-2018 IPR006869 Domain of unknown function DUF547 VAB027_3673 bb484d202a5c2aba46f4bd922e546c70 99 Pfam PF12305 Protein of unknown function (DUF3630) 5 97 7.5E-36 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 VAB027_1505 62249a10e546c3d5adb18d92499624a9 519 Pfam PF03806 AbgT putative transporter family 19 517 5.5E-220 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VAB027_2280 dd301f468136f3ab77aa4a1b28da4e5f 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 2.9E-88 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VAB027_1517 d6940b1017aff728894d3e27b4aaf05d 528 Pfam PF03806 AbgT putative transporter family 19 526 1.8E-231 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VAB027_2858 3dac68a5f9e11ece92271ad4702e3c3f 146 Pfam PF04214 Protein of unknown function, DUF 48 117 2.1E-32 T 14-10-2018 IPR007332 Protein of unknown function DUF411 VAB027_3071 b463b0bedbdd708da43f6e85d7ea41a0 256 Pfam PF16537 Type II secretion system protein B 191 250 4.0E-23 T 14-10-2018 IPR032389 Type II secretion system protein B VAB027_950 53f8ceb327dac5a055d7455b12fc7c1b 458 Pfam PF07670 Nucleoside recognition 144 237 3.2E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAB027_2352 5e10d929a3f3f0dbcddd845774189e39 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 8.0E-20 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VAB027_2363 60ee22ea0ecbf85207984a60d9e889ec 273 Pfam PF02698 DUF218 domain 80 242 5.4E-29 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VAB027_631 47c4ebddb9f3b639f6a3646b3af949ca 620 Pfam PF02705 K+ potassium transporter 13 542 1.4E-190 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 VAB027_631 47c4ebddb9f3b639f6a3646b3af949ca 620 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 4 620 30.535 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup VAB027_842 e76d4c195e6f1f15efd641e2d231af8f 287 Pfam PF08878 Domain of unknown function (DUF1837) 42 269 1.6E-46 T 14-10-2018 IPR014976 Protein of unknown function DUF1837 VAB027_1232 449adfb312d33e70a67dfaf0ae02268e 434 Pfam PF10117 McrBC 5-methylcytosine restriction system component 66 376 4.3E-12 T 14-10-2018 IPR019292 5-methylcytosine restriction system component VAB027_3660 297bb120bcc850311f9ce08127b3ed10 384 Pfam PF13391 HNH endonuclease 25 92 2.4E-5 T 14-10-2018 IPR003615 HNH nuclease VAB027_1082 7b3c531ba97d4af32944fbe2da0048f2 240 Pfam PF01925 Sulfite exporter TauE/SafE 12 232 1.2E-28 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAB027_1923 77d1a897c544a7acabf63a6d2daf4b45 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 6.0E-9 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VAB027_37 43a5aaaf5319d86d4428cf79592ea31b 157 Hamap MF_00598 Protein Smg [smg]. 1 157 32.843 T 14-10-2018 IPR007456 Smg VAB027_37 43a5aaaf5319d86d4428cf79592ea31b 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 5.1E-60 T 14-10-2018 IPR007456 Smg VAB027_2210 4ef749f9ac5afd19dcaa3647bbc7d76a 330 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 320 1.8E-79 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAB027_1630 789c89e6d7cacfa0f01e2443f64454a0 144 Pfam PF04892 VanZ like family 62 129 4.3E-7 T 14-10-2018 IPR006976 VanZ-like VAB027_516 7cc8c093b48755de44587c9609884ef0 378 SUPERFAMILY SSF56059 122 313 7.95E-8 T 14-10-2018 VAB027_797 49ab8c13f7c9f4487c7b393f04790718 743 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 376 699 1.0E-154 T 14-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 VAB027_1584 79ebc182a4212fa14ee092264986f84c 257 Pfam PF04233 Phage Mu protein F like protein 50 180 5.0E-18 T 14-10-2018 IPR006528 Phage head morphogenesis domain VAB027_883 87eefe45cd8d04fe0d27236f6dacba35 107 Pfam PF03334 Na+/H+ antiporter subunit 8 85 2.7E-24 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 VAB027_883 87eefe45cd8d04fe0d27236f6dacba35 107 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 95 2.1E-26 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 VAB027_2937 96e6cf50d894289f9644f7e755dbe21f 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.5E-52 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG VAB027_436 7564669b7008b960f45a8dc7e7a8a8f3 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.291 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VAB027_436 7564669b7008b960f45a8dc7e7a8a8f3 106 PIRSF PIRSF028773 1 104 1.1E-48 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VAB027_436 7564669b7008b960f45a8dc7e7a8a8f3 106 Pfam PF04363 Protein of unknown function (DUF496) 1 92 2.8E-43 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VAB027_436 7564669b7008b960f45a8dc7e7a8a8f3 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 4.0E-45 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VAB027_3725 85078db31ccfaca59f239927ef654a34 129 Pfam PF03899 ATP synthase I chain 15 111 4.2E-17 T 14-10-2018 IPR005598 ATP synthase protein I VAB027_3171 fe5e7ede353bacee739a1ceaeb51a036 382 Pfam PF02690 Na+/Pi-cotransporter 218 324 4.1E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VAB027_3171 fe5e7ede353bacee739a1ceaeb51a036 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 1.8E-22 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VAB027_1924 987e8026578ec1fff1e672f4ce9141ec 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.1E-33 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VAB027_1912 2dac0f9f09fce4cfdd996b4e13b01671 113 Pfam PF03788 LrgA family 9 100 4.6E-23 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 VAB027_1986 946078ef3aa7d26386e6119602112bfb 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.0E-71 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 VAB027_3009 006e7db7d862fd8bb131305928f074ac 317 Pfam PF03186 CobD/Cbib protein 19 289 3.0E-35 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VAB027_602 5c64a419a6e6ab7d68bb6b352fac8064 124 Pfam PF10719 Late competence development protein ComFB 8 83 3.4E-13 T 14-10-2018 IPR019657 Late competence development protein ComFB VAB027_3393 d4e05606b8d8c5b9efbfb1e5f1d209a6 253 Pfam PF06738 Putative threonine/serine exporter 10 247 1.1E-67 T 14-10-2018 IPR010619 Putative threonine/serine exporter VAB027_257 1e9d4c33813d95dff6087da5ec33d1a5 194 Pfam PF05137 Fimbrial assembly protein (PilN) 102 178 8.5E-16 T 14-10-2018 IPR007813 Fimbrial assembly PilN VAB027_865 e540d5eaf5a21390d23d1176631390cd 162 Pfam PF14316 Domain of unknown function (DUF4381) 10 146 1.4E-37 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VAB027_999 c75d0be264dd92810d52232f125d7167 341 Pfam PF01757 Acyltransferase family 8 323 2.5E-26 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VAB027_2215 d475742933fdd8791270e84420d043a3 152 Pfam PF09900 Predicted membrane protein (DUF2127) 7 143 2.9E-43 T 14-10-2018 IPR021125 Protein of unknown function DUF2127 VAB027_2663 9205d9ae7854a9c5eeb5345ba8fab6d8 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 2.4E-17 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VAB027_3595 bdb0ca8714ae715e1722070af6b1ec39 430 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 6 411 3.0E-11 T 14-10-2018 VAB027_2174 15c6a085e5f632c37b012ba49077f319 91 Pfam PF11173 Protein of unknown function (DUF2960) 1 75 2.1E-35 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 VAB027_27 aa2dd73d48ffa074ff4d385d8e4c3173 263 Pfam PF07070 SpoOM protein 4 219 4.1E-78 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VAB027_517 d666a86d08e38bbd910939acf5c88252 180 SUPERFAMILY SSF109854 17 164 3.97E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VAB027_787 a8b6fdde22a1582026fdec9e97841dc2 205 Pfam PF01810 LysE type translocator 16 200 2.7E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020