locus_tag old_locus_tag gene Name start end strand product note type ID NCBI VAA049_1 VAA049_1 dnaA dnaA 38 1441 + chromosomal replication initiator protein DnaA dnaA: chromosomal replication initiator protein DnaA~[L] COG0593 ATPase involved in DNA replication initiation gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1 VAA049_10 VAA049_10 glyQ glyQ 11621 12538 - glycine--tRNA ligase%2C alpha subunit glyQ: glycine--tRNA ligase%2C alpha subunit~[J] COG0752 Glycyl-tRNA synthetase%2C alpha subunit gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_10 VAA049_100 VAA049_100 hemN hemN 102751 104139 + oxygen-independent coproporphyrinogen III oxidase hemN: oxygen-independent coproporphyrinogen III oxidase~[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_100 VAA049_1000 VAA049_1000 VAA049_1000 1074400 1076334 - hypothetical protein prkA serine kinase C-terminal domain protein~[T] COG2766 Putative Ser protein kinase gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1000 VAA049_1001 VAA049_1001 VAA049_1001 1076575 1077075 - yfbU domain protein [S] COG3013 Uncharacterized conserved protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1001 VAA049_1002 VAA049_1002 VAA049_1002 1077196 1077858 - cobalt uptake substrate-specific transmembrane region family protein [S] COG3235 Predicted membrane protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1002 VAA049_1003 VAA049_1003 pflA pflA 1077924 1078664 - pyruvate formate-lyase 1-activating enzyme PFLA: pyruvate formate-lyase 1-activating enzyme~[O] COG1180 Pyruvate-formate lyase-activating enzyme gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1003 VAA049_1004 VAA049_1004 VAA049_1004 1078997 1080877 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1004 VAA049_1005 VAA049_1005 VAA049_1005 1080895 1081881 - hypothetical protein conserved hypothetical protein~[S] COG3528 Uncharacterized protein conserved in bacteria gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1005 VAA049_1006 VAA049_1006 pflB pflB 1082059 1084335 - formate acetyltransferase pyr_form_ly_1: formate acetyltransferase~[C] COG1882 Pyruvate-formate lyase gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1006 VAA049_1007 VAA049_1007 VAA049_1007 1084601 1086142 - hypothetical protein conserved hypothetical protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1007 VAA049_1008 VAA049_1008 VAA049_1008 1086468 1086638 + hypothetical protein conserved hypothetical protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1008 VAA049_1009 VAA049_1009 VAA049_1009 1086859 1087629 + ABC transporter family protein [E] COG4598 ABC-type histidine transport system%2C ATPase component gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1009 VAA049_101 VAA049_101 VAA049_101 104203 105399 - TPR repeat family protein [H] COG3071 Uncharacterized enzyme of heme biosynthesis gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_101 VAA049_1010 VAA049_1010 VAA049_1010 1087814 1088590 + lysine-arginine-ornithine-binding periplasmic family protein 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1010 VAA049_1011 VAA049_1011 VAA049_1011 1088738 1089478 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4215 ABC-type arginine transport system%2C permease component gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1011 VAA049_1012 VAA049_1012 VAA049_1012 1089481 1090158 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4160 ABC-type arginine/histidine transport system%2C permease component gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1012 VAA049_1013 VAA049_1013 xth xth 1090217 1091023 - exodeoxyribonuclease III exoDNase_III: exodeoxyribonuclease III~[L] COG0708 Exonuclease III gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1013 VAA049_1014 VAA049_1014 VAA049_1014 1091221 1093341 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1014 VAA049_1015 VAA049_1015 VAA049_1015 1093365 1093577 - hypothetical protein conserved hypothetical protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1015 VAA049_1016 VAA049_1016 VAA049_1016 1093578 1094126 - primosomal replication priB and priC family protein [L] COG3923 Primosomal replication protein N'' gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1016 VAA049_1017 VAA049_1017 VAA049_1017 1094126 1094902 - sulfite exporter TauE/SafE family protein [R] COG0730 Predicted permeases gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1017 VAA049_1018 VAA049_1018 VAA049_1018 1094943 1097018 - DEAD_2 family protein [KL] COG1199 Rad3-related DNA helicases gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1018 VAA049_1019 VAA049_1019 VAA049_1019 1097528 1098550 + gram-negative porin family protein gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1019 VAA049_102 VAA049_102 VAA049_102 105396 106595 - hemX family protein [H] COG2959 Uncharacterized enzyme of heme biosynthesis gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_102 VAA049_1020 VAA049_1020 VAA049_1020 1098625 1099236 + hypothetical protein conserved hypothetical protein~[S] COG3110 Uncharacterized protein conserved in bacteria gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1020 VAA049_1021 VAA049_1021 VAA049_1021 1099331 1100371 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1021 VAA049_1022 VAA049_1022 VAA049_1022 1100481 1100936 - SEC-C motif family protein [S] COG3012 Uncharacterized protein conserved in bacteria gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1022 VAA049_1023 VAA049_1023 VAA049_1023 1100998 1102212 - HDOD domain protein [T] COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1023 VAA049_1024 VAA049_1024 lpxH lpxH 1102308 1103048 - UDP-2%2C3-diacylglucosamine diphosphatase lipid_A_lpxH: UDP-2%2C3-diacylglucosamine diphosphatase~[S] COG2908 Uncharacterized protein conserved in bacteria gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1024 VAA049_1025 VAA049_1025 VAA049_1025 1103089 1103583 - cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1025 VAA049_1026 VAA049_1026 cysS cysS 1103729 1105108 + cysteine--tRNA ligase cysS: cysteine--tRNA ligase~[J] COG0215 Cysteinyl-tRNA synthetase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1026 VAA049_1027 VAA049_1027 ruvC ruvC 1105196 1105717 + crossover junction endodeoxyribonuclease RuvC ruvC: crossover junction endodeoxyribonuclease RuvC~[L] COG0817 Holliday junction resolvasome%2C endonuclease subunit gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1027 VAA049_1028 VAA049_1028 ruvA ruvA 1105811 1106425 + Holliday junction DNA helicase RuvA ruvA: Holliday junction DNA helicase RuvA~[L] COG0632 Holliday junction resolvasome%2C DNA-binding subunit gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1028 VAA049_1029 VAA049_1029 ruvB ruvB 1106481 1107485 + Holliday junction DNA helicase RuvB ruvB: Holliday junction DNA helicase RuvB~[L] COG2255 Holliday junction resolvasome%2C helicase subunit gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1029 VAA049_103 VAA049_103 VAA049_103 106579 107346 - uroporphyrinogen-III synthase HemD family protein [H] COG1587 Uroporphyrinogen-III synthase gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_103 VAA049_1030 VAA049_1030 VAA049_1030 1107944 1109530 + bacterial Cytochrome Ubiquinol Oxidase family protein [C] COG1271 Cytochrome bd-type quinol oxidase%2C subunit 1 gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1030 VAA049_1031 VAA049_1031 cydB cydB 1109548 1110684 + cytochrome d ubiquinol oxidase%2C subunit II cydB: cytochrome d ubiquinol oxidase%2C subunit II~[C] COG1294 Cytochrome bd-type quinol oxidase%2C subunit 2 gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1031 VAA049_1032 VAA049_1032 VAA049_1032 1110697 1110804 + cyd operon protein YbgT cyd_oper_ybgT: cyd operon protein YbgT~[S] COG4890 Predicted outer membrane lipoprotein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1032 VAA049_1033 VAA049_1033 ybgC ybgC 1111283 1111690 + tol-pal system-associated acyl-CoA thioesterase thio_ybgC: tol-pal system-associated acyl-CoA thioesterase~[R] COG0824 Predicted thioesterase gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1033 VAA049_1034 VAA049_1034 tolQ tolQ 1111680 1112363 + protein TolQ tolQ: protein TolQ~[U] COG0811 Biopolymer transport proteins gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1034 VAA049_1035 VAA049_1035 tolR tolR 1112366 1112806 + protein TolR tolR: protein TolR~[U] COG0848 Biopolymer transport protein gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1035 VAA049_1036 VAA049_1036 tolA tolA 1112824 1113894 + protein TolA tolA_full: protein TolA~[M] COG3064 Membrane protein involved in colicin uptake gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1036 VAA049_1037 VAA049_1037 tolB tolB 1113909 1115261 + Tol-Pal system beta propeller repeat protein TolB propeller_TolB: Tol-Pal system beta propeller repeat protein TolB~[U] COG0823 Periplasmic component of the Tol biopolymer transport system gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1037 VAA049_1038 VAA049_1038 pal pal 1115293 1115811 + peptidoglycan-associated lipoprotein pal_lipo: peptidoglycan-associated lipoprotein~[M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1038 VAA049_1039 VAA049_1039 ygbF ygbF 1115827 1116591 + tol-pal system protein YbgF tol_pal_ybgF: tol-pal system protein YbgF~[S] COG1729 Uncharacterized protein conserved in bacteria gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1039 VAA049_104 VAA049_104 hemC hemC 107423 108358 - hydroxymethylbilane synthase hemC: hydroxymethylbilane synthase~[H] COG0181 Porphobilinogen deaminase gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_104 VAA049_1040 VAA049_1040 nadA nadA 1116765 1117826 + quinolinate synthetase complex%2C A subunit nadA: quinolinate synthetase complex%2C A subunit~[H] COG0379 Quinolinate synthase gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1040 VAA049_1041 VAA049_1041 VAA049_1041 1117900 1118472 - yecA family protein ygfB_yecA: yecA family protein~[R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1041 VAA049_1042 VAA049_1042 VAA049_1042 1118686 1120890 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1042 VAA049_1043 VAA049_1043 VAA049_1043 1121234 1121686 + hypothetical protein conserved hypothetical protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1043 VAA049_1044 VAA049_1044 manA manA 1121806 1123026 - mannose-6-phosphate isomerase%2C class I manA: mannose-6-phosphate isomerase%2C class I~[G] COG1482 Phosphomannose isomerase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1044 VAA049_1045 VAA049_1045 fruA fruA 1123088 1124989 - PTS system%2C fructose subfamily%2C IIA component domain protein fruA: PTS system%2C fructose subfamily%2C IIA component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1045 VAA049_1046 VAA049_1046 VAA049_1046 1126192 1126968 - PTS HPr component phosphorylation site family protein [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1046 VAA049_1047 VAA049_1047 VAA049_1047 1125361 1126200 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1047 VAA049_1048 VAA049_1048 VAA049_1048 1126980 1127279 - PTS system%2C Fru family%2C IIB component domain protein FRU: PTS system%2C Fru family%2C IIB component domain protein~[G] COG1445 Phosphotransferase system fructose-specific component IIB gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1048 VAA049_1049 VAA049_1049 fruA fruA 1127509 1129374 + PTS system%2C fructose subfamily%2C IIA component domain protein fruA: PTS system%2C fructose subfamily%2C IIA component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1049 VAA049_105 VAA049_105 VAA049_105 108715 111246 + adenylate cyclase%2C class-I family protein [F] COG3072 Adenylate cyclase gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_105 VAA049_1050 VAA049_1050 VAA049_1050 1129450 1130853 - PTS system%2C Fru family%2C IIB component domain protein FRU: PTS system%2C Fru family%2C IIB component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1050 VAA049_1051 VAA049_1051 VAA049_1051 1130865 1131305 - phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 family protein [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1051 VAA049_1052 VAA049_1052 VAA049_1052 1131627 1133147 - aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1052 VAA049_1053 VAA049_1053 VAA049_1053 1133431 1135191 + bacterial regulatory%2C Fis family protein [QK] COG3284 Transcriptional activator of acetoin/glycerol metabolism gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1053 VAA049_1054 VAA049_1054 VAA049_1054 1135288 1135503 + hypothetical protein conserved hypothetical protein~[S] COG4628 Uncharacterized conserved protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1054 VAA049_1055 VAA049_1055 VAA049_1055 1135533 1136240 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1055 VAA049_1056 VAA049_1056 VAA049_1056 1136237 1137622 - cryptochrome%2C DASH family protein crypto_DASH: cryptochrome%2C DASH family protein~[L] COG0415 Deoxyribodipyrimidine photolyase gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1056 VAA049_1057 VAA049_1057 VAA049_1057 1137763 1138158 + hypothetical protein conserved hypothetical protein~[S] COG3011 Uncharacterized protein conserved in bacteria gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1057 VAA049_1058 VAA049_1058 VAA049_1058 1138752 1138955 - hypothetical protein conserved hypothetical protein gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1058 VAA049_1059 VAA049_1059 VAA049_1059 1138287 1138760 + NYN domain protein [S] COG1432 Uncharacterized conserved protein gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1059 VAA049_106 VAA049_106 cyaY cyaY 111352 111666 - iron donor protein CyaY feS_CyaY: iron donor protein CyaY~[P] COG1965 Protein implicated in iron transport%2C frataxin homolog gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_106 VAA049_1060 VAA049_1060 VAA049_1060 1139087 1139174 - tRNA-Ser tRNA gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1060 VAA049_1061 VAA049_1061 VAA049_1061 1139386 1142436 - acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1061 VAA049_1062 VAA049_1062 VAA049_1062 1142436 1143530 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1062 VAA049_1063 VAA049_1063 VAA049_1063 1143746 1144324 - hypothetical protein conserved hypothetical protein~[S] COG3009 Uncharacterized protein conserved in bacteria gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1063 VAA049_1064 VAA049_1064 VAA049_1064 1144321 1145949 - mce related family protein [R] COG3008 Paraquat-inducible protein B gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1064 VAA049_1065 VAA049_1065 VAA049_1065 1145964 1147205 - integral membrane%2C PqiA family protein pqiA_fam: integral membrane%2C PqiA family protein~[S] COG2995 Uncharacterized paraquat-inducible protein A gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1065 VAA049_1066 VAA049_1066 VAA049_1066 1147529 1148158 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1066 VAA049_1067 VAA049_1067 VAA049_1067 1149623 1149904 - hypothetical protein conserved hypothetical protein gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1067 VAA049_1068 VAA049_1068 VAA049_1068 1148191 1149642 + succinate-semialdehyde dehydrogenase family protein SSADH: succinate-semialdehyde dehydrogenase family protein~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1068 VAA049_1069 VAA049_1069 VAA049_1069 1149949 1150860 - pyridoxal-phosphate dependent enzyme family protein [E] COG2515 1-aminocyclopropane-1-carboxylate deaminase gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1069 VAA049_107 VAA049_107 lysA lysA 111891 113144 + diaminopimelate decarboxylase lysA: diaminopimelate decarboxylase~[E] COG0019 Diaminopimelate decarboxylase gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_107 VAA049_1070 VAA049_1070 VAA049_1070 1151393 1152019 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1070 VAA049_1071 VAA049_1071 VAA049_1071 1152075 1154357 + hypothetical protein acyl-CoA dehydrogenase%2C C-terminal domain protein~[I] COG1960 Acyl-CoA dehydrogenases gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1071 VAA049_1072 VAA049_1072 VAA049_1072 1154556 1155761 + NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein [S] COG3007 Uncharacterized paraquat-inducible protein B gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1072 VAA049_1073 VAA049_1073 infA infA 1156065 1156283 - translation initiation factor IF-1 infA: translation initiation factor IF-1~[J] COG0361 Translation initiation factor 1 (IF-1) gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1073 VAA049_1074 VAA049_1074 VAA049_1074 1156367 1157068 - hypothetical protein arginine-tRNA-transferase%2C N terminus family protein~[O] COG2935 Putative arginyl-tRNA:protein arginylyltransferase gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1074 VAA049_1075 VAA049_1075 aat aat 1157072 1157803 - leucyl/phenylalanyl-tRNA--protein transferase aat: leucyl/phenylalanyl-tRNA--protein transferase~[O] COG2360 Leu/Phe-tRNA-protein transferase gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1075 VAA049_1076 VAA049_1076 aroA aroA 1158070 1159350 + 3-phosphoshikimate 1-carboxyvinyltransferase aroA: 3-phosphoshikimate 1-carboxyvinyltransferase~[E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1076 VAA049_1077 VAA049_1077 VAA049_1077 1159441 1159689 - hypothetical protein conserved hypothetical protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1077 VAA049_1078 VAA049_1078 topA topA 1160027 1162657 + DNA topoisomerase I topA_bact: DNA topoisomerase I~[L] COG0550 Topoisomerase IA gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1078 VAA049_1079 VAA049_1079 glgC glgC 1163326 1164543 + glucose-1-phosphate adenylyltransferase glgC: glucose-1-phosphate adenylyltransferase~[G] COG0448 ADP-glucose pyrophosphorylase gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1079 VAA049_108 VAA049_108 dapF dapF 113156 113986 + diaminopimelate epimerase dapF: diaminopimelate epimerase~[E] COG0253 Diaminopimelate epimerase gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_108 VAA049_1080 VAA049_1080 glgA glgA 1164545 1165999 + glycogen/starch synthase%2C ADP-glucose type family protein glgA: glycogen/starch synthase%2C ADP-glucose type family protein~[G] COG0297 Glycogen synthase gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1080 VAA049_1081 VAA049_1081 VAA049_1081 1166187 1167005 + alpha/beta hydrolase family protein [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1081 VAA049_1082 VAA049_1082 VAA049_1082 1167010 1167321 - hypothetical protein conserved hypothetical protein gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1082 VAA049_1083 VAA049_1083 VAA049_1083 1167355 1168044 - hypothetical protein conserved hypothetical protein~[S] COG0398 Uncharacterized conserved protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1083 VAA049_1084 VAA049_1084 VAA049_1084 1168399 1168986 - hypothetical protein tfoX N-terminal domain protein~[K] COG3070 Regulator of competence-specific genes gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1084 VAA049_1085 VAA049_1085 VAA049_1085 1169345 1170355 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1085 VAA049_1086 VAA049_1086 VAA049_1086 1170762 1171424 - nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1086 VAA049_1087 VAA049_1087 VAA049_1087 1171649 1172353 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1087 VAA049_1088 VAA049_1088 VAA049_1088 1172454 1173275 - hypothetical protein conserved hypothetical protein~[S] COG1434 Uncharacterized conserved protein gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1088 VAA049_1089 VAA049_1089 VAA049_1089 1173392 1174174 + ubiE/COQ5 methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1089 VAA049_109 VAA049_109 VAA049_109 114000 114698 + hypothetical protein conserved hypothetical protein~[S] COG3159 Uncharacterized protein conserved in bacteria gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_109 VAA049_1090 VAA049_1090 VAA049_1090 1174186 1175523 + kicB killing factor family protein [D] COG3006 Uncharacterized protein involved in chromosome partitioning gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1090 VAA049_1091 VAA049_1091 VAA049_1091 1175504 1176226 + mukE-like family protein [D] COG3095 Uncharacterized protein involved in chromosome partitioning gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1091 VAA049_1092 VAA049_1092 VAA049_1092 1176223 1180698 + hypothetical protein mukB N-terminal family protein~[D] COG3096 Uncharacterized protein involved in chromosome partitioning gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1092 VAA049_1093 VAA049_1093 VAA049_1093 1180779 1181222 - asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1093 VAA049_1094 VAA049_1094 VAA049_1094 1181330 1181914 + lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1094 VAA049_1095 VAA049_1095 VAA049_1095 1182028 1184397 - radical SAM superfamily protein [C] COG1032 Fe-S oxidoreductase gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1095 VAA049_1096 VAA049_1096 VAA049_1096 1184677 1187133 + sensory box protein [T] COG2202 FOG: PAS/PAC domain gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1096 VAA049_1097 VAA049_1097 VAA049_1097 1187267 1190035 - insulinase family protein [R] COG0612 Predicted Zn-dependent peptidases gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1097 VAA049_1098 VAA049_1098 VAA049_1098 1190292 1190945 + putative membrane protein gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1098 VAA049_1099 VAA049_1099 VAA049_1099 1191060 1191260 + hypothetical protein conserved hypothetical protein gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1099 VAA049_11 VAA049_11 VAA049_11 12954 13508 + hypothetical protein conserved hypothetical protein~[S] COG2119 Predicted membrane protein gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_11 VAA049_110 VAA049_110 xerC xerC 114667 115602 + tyrosine recombinase XerC recomb_XerC: tyrosine recombinase XerC~[L] COG4973 Site-specific recombinase XerC gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_110 VAA049_1100 VAA049_1100 VAA049_1100 1191267 1192184 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1100 VAA049_1101 VAA049_1101 metE metE 1192580 1194865 + 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~[E] COG0620 Methionine synthase II (cobalamin-independent) gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1101 VAA049_1102 VAA049_1102 VAA049_1102 1195140 1195538 - hypothetical protein conserved hypothetical protein gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1102 VAA049_1103 VAA049_1103 VAA049_1103 1195540 1195836 - YCII-related domain protein [S] COG2350 Uncharacterized protein conserved in bacteria gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1103 VAA049_1104 VAA049_1104 VAA049_1104 1195911 1196330 - thioesterase superfamily protein [I] COG1607 Acyl-CoA hydrolase gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1104 VAA049_1105 VAA049_1105 ispZ ispZ 1196490 1197035 - intracellular septation protein A ispZ: intracellular septation protein A~[D] COG2917 Intracellular septation protein A gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1105 VAA049_1106 VAA049_1106 VAA049_1106 1197268 1197492 - hypothetical protein conserved hypothetical protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1106 VAA049_1107 VAA049_1107 VAA049_1107 1197692 1198336 - hypothetical protein conserved hypothetical protein~[S] COG1434 Uncharacterized conserved protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1107 VAA049_1108 VAA049_1108 VAA049_1108 1198329 1199159 - UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1108 VAA049_1109 VAA049_1109 VAA049_1109 1199263 1199496 - phosphate-starvation-inducible E family protein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1109 VAA049_111 VAA049_111 VAA049_111 115605 116324 + HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_111 VAA049_1110 VAA049_1110 focA focA 1199848 1200690 + formate transporter FocA formate_focA: formate transporter FocA~[P] COG2116 Formate/nitrite family of transporters gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1110 VAA049_1111 VAA049_1111 torE torE 1201357 1201539 + trimethylamine N-oxide reductase system%2C TorE protein TMAO_torE: trimethylamine N-oxide reductase system%2C TorE protein~[C] COG4459 Periplasmic nitrate reductase system%2C NapE component gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1111 VAA049_1112 VAA049_1112 torC torC 1201586 1202770 + trimethylamine-N-oxide reductase c-type cytochrome TorC torC: trimethylamine-N-oxide reductase c-type cytochrome TorC~[C] COG3005 Nitrate/TMAO reductases%2C membrane-bound tetraheme cytochrome c subunit gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1112 VAA049_1113 VAA049_1113 torA torA 1202794 1205256 + trimethylamine-N-oxide reductase TorA torA: trimethylamine-N-oxide reductase TorA~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1113 VAA049_1114 VAA049_1114 VAA049_1114 1205455 1207191 + glycosyl hydrolases 31 family protein [G] COG3345 Alpha-galactosidase gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1114 VAA049_1115 VAA049_1115 VAA049_1115 1207254 1208462 - hypothetical protein conserved hypothetical protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1115 VAA049_1116 VAA049_1116 VAA049_1116 1208648 1209553 + DHHA2 domain protein [C] COG1227 Inorganic pyrophosphatase/exopolyphosphatase gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1116 VAA049_1117 VAA049_1117 VAA049_1117 1209687 1210076 + hypothetical protein conserved hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1117 VAA049_1118 VAA049_1118 VAA049_1118 1210113 1210880 - hypothetical protein conserved hypothetical protein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1118 VAA049_1119 VAA049_1119 VAA049_1119 1210884 1211672 - ABC transporter family protein [V] COG4167 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1119 VAA049_112 VAA049_112 VAA049_112 116434 118923 + EAL domain protein [T] COG2199 FOG: GGDEF domain gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_112 VAA049_1120 VAA049_1120 VAA049_1120 1211669 1212664 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[V] COG4170 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1120 VAA049_1121 VAA049_1121 VAA049_1121 1212664 1213551 - binding--dependent transport system inner membrane component family protein [V] COG4171 ABC-type antimicrobial peptide transport system%2C permease component gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1121 VAA049_1122 VAA049_1122 VAA049_1122 1213538 1214500 - binding--dependent transport system inner membrane component family protein [V] COG4168 ABC-type antimicrobial peptide transport system%2C permease component gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1122 VAA049_1123 VAA049_1123 VAA049_1123 1214500 1216083 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1123 VAA049_1124 VAA049_1124 pspF pspF 1216236 1217255 - psp operon transcriptional activator phageshock_pspF: psp operon transcriptional activator~[KT] COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1124 VAA049_1125 VAA049_1125 pspA pspA 1217465 1218133 + phage shock protein A phageshock_pspA: phage shock protein A~[KT] COG1842 Phage shock protein A (IM30)%2C suppresses sigma54-dependent transcription gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1125 VAA049_1126 VAA049_1126 pspB pspB 1218147 1218380 + phage shock protein B phageshock_pspB: phage shock protein B gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1126 VAA049_1127 VAA049_1127 pspC pspC 1218373 1218762 + phage shock protein C phageshock_pspC: phage shock protein C~[KT] COG1983 Putative stress-responsive transcriptional regulator gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1127 VAA049_1128 VAA049_1128 VAA049_1128 1218934 1219965 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1128 VAA049_1129 VAA049_1129 VAA049_1129 1219967 1221046 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1129 VAA049_113 VAA049_113 VAA049_113 118956 119552 - DTW domain protein [S] COG3148 Uncharacterized conserved protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_113 VAA049_1130 VAA049_1130 VAA049_1130 1221039 1224137 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1130 VAA049_1131 VAA049_1131 VAA049_1131 1224224 1224805 + methyladenine glycosylase family protein [L] COG2818 3-methyladenine DNA glycosylase gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1131 VAA049_1132 VAA049_1132 metC metC 1224892 1226082 - cystathionine beta-lyase cysta_beta_ly_B: cystathionine beta-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1132 VAA049_1133 VAA049_1133 cls cls 1226187 1227641 - cardiolipin synthase bac_cardiolipin: cardiolipin synthase~[I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1133 VAA049_1134 VAA049_1134 VAA049_1134 1228050 1229336 + neurotransmitter symporter family protein sodium:neurotransmitter symporter family protein~[R] COG0733 Na+-dependent transporters of the SNF family gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1134 VAA049_1135 VAA049_1135 VAA049_1135 1229437 1230144 + RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1135 VAA049_1136 VAA049_1136 VAA049_1136 1230203 1230823 - CDP-alcohol phosphatidyltransferase family protein [I] COG0558 Phosphatidylglycerophosphate synthase gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1136 VAA049_1137 VAA049_1137 VAA049_1137 1230816 1231478 - ABC transporter family protein [R] COG4136 ABC-type uncharacterized transport system%2C ATPase component gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1137 VAA049_1138 VAA049_1138 VAA049_1138 1231444 1233144 - binding--dependent transport system inner membrane component family protein [R] COG4135 ABC-type uncharacterized transport system%2C permease component gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1138 VAA049_1139 VAA049_1139 VAA049_1139 1233158 1234306 - bacterial extracellular solute-binding family protein [R] COG4134 ABC-type uncharacterized transport system%2C periplasmic component gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1139 VAA049_114 VAA049_114 VAA049_114 119549 121093 - hypothetical protein conserved hypothetical protein~[S] COG3650 Predicted membrane protein gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_114 VAA049_1140 VAA049_1140 VAA049_1140 1234514 1234957 - META domain protein [O] COG3187 Heat shock protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1140 VAA049_1141 VAA049_1141 VAA049_1141 1235104 1235370 + hypothetical protein conserved hypothetical protein~[R] COG3313 Predicted Fe-S protein gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1141 VAA049_1142 VAA049_1142 VAA049_1142 1235376 1235591 - hypothetical protein conserved hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1142 VAA049_1143 VAA049_1143 VAA049_1143 1235756 1236853 - ABC-2 type transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1143 VAA049_1144 VAA049_1144 VAA049_1144 1236850 1237776 - ABC transporter family protein [V] COG1131 ABC-type multidrug transport system%2C ATPase component gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1144 VAA049_1145 VAA049_1145 VAA049_1145 1237786 1238733 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1145 VAA049_1146 VAA049_1146 VAA049_1146 1238902 1240155 - tryptophan/tyrosine permease family protein [E] COG0814 Amino acid permeases gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1146 VAA049_1147 VAA049_1147 VAA049_1147 1240339 1240464 - hypothetical protein conserved hypothetical protein gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1147 VAA049_1148 VAA049_1148 VAA049_1148 1240491 1241354 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1148 VAA049_1149 VAA049_1149 mgtE mgtE 1241437 1242789 - magnesium transporter mgtE: magnesium transporter~[P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1149 VAA049_115 VAA049_115 VAA049_115 121377 122204 - HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_115 VAA049_1150 VAA049_1150 VAA049_1150 1243583 1247023 + sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1150 VAA049_1151 VAA049_1151 VAA049_1151 1247028 1248782 + bacterial regulatory s%2C luxR family protein [T] COG2200 FOG: EAL domain gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1151 VAA049_1152 VAA049_1152 VAA049_1152 1248794 1250455 + response regulator gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1152 VAA049_1153 VAA049_1153 prt prt 1250489 1252936 - microbial collagenase gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1153 VAA049_1154 VAA049_1154 VAA049_1154 1253264 1254910 + GlyGly-CTERM domain protein glyGly_CTERM: GlyGly-CTERM domain protein~[O] COG5640 Secreted trypsin-like serine protease gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1154 VAA049_1155 VAA049_1155 VAA049_1155 1254991 1256754 - bacterial extracellular solute-binding s%2C 5 Middle family protein [R] COG4533 ABC-type uncharacterized transport system%2C periplasmic component gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1155 VAA049_1156 VAA049_1156 VAA049_1156 1256868 1257584 - transposase DDE domain protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1156 VAA049_1157 VAA049_1157 VAA049_1157 1257787 1257957 + hypothetical protein conserved hypothetical protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1157 VAA049_1158 VAA049_1158 VAA049_1158 1258047 1258211 + hypothetical protein conserved hypothetical protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1158 VAA049_1159 VAA049_1159 VAA049_1159 1258382 1258990 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1159 VAA049_116 VAA049_116 VAA049_116 122319 123335 - alpha/beta hydrolase family protein [I] COG2267 Lysophospholipase gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_116 VAA049_1160 VAA049_1160 VAA049_1160 1259107 1260297 - hypothetical protein conserved hypothetical protein gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1160 VAA049_1161 VAA049_1161 VAA049_1161 1260685 1262388 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1161 VAA049_1162 VAA049_1162 VAA049_1162 1262839 1263075 + ribosome recycling factor family protein gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1162 VAA049_1163 VAA049_1163 VAA049_1163 1263167 1263940 + EAL domain protein [T] COG2200 FOG: EAL domain gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1163 VAA049_1164 VAA049_1164 VAA049_1164 1264094 1264372 - ribosomal L25p family protein [J] COG1825 Ribosomal protein L25 (general stress protein Ctc) gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1164 VAA049_1165 VAA049_1165 VAA049_1165 1264529 1265902 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG0642 Signal transduction histidine kinase gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1165 VAA049_1166 VAA049_1166 VAA049_1166 1265892 1266551 - response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1166 VAA049_1167 VAA049_1167 VAA049_1167 1266563 1266964 - putative membrane protein [S] COG3212 Predicted membrane protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1167 VAA049_1168 VAA049_1168 VAA049_1168 1267235 1269019 - DEAD/DEAH box helicase family protein [KL] COG1061 DNA or RNA helicases of superfamily II gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1168 VAA049_1169 VAA049_1169 VAA049_1169 1269153 1269848 + pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1169 VAA049_117 VAA049_117 VAA049_117 123410 124027 + lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_117 VAA049_1170 VAA049_1170 VAA049_1170 1270168 1271373 + drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1170 VAA049_1171 VAA049_1171 VAA049_1171 1271373 1272032 + hypothetical protein conserved hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1171 VAA049_1172 VAA049_1172 VAA049_1172 1272119 1273555 - NAD dependent epimerase/dehydratase family protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1172 VAA049_1173 VAA049_1173 VAA049_1173 1273683 1275059 + MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1173 VAA049_1174 VAA049_1174 VAA049_1174 1275185 1275856 + ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1174 VAA049_1175 VAA049_1175 VAA049_1175 1275837 1278290 + ftsX-like permease family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1175 VAA049_1176 VAA049_1176 VAA049_1176 1278291 1279409 + hydroxyneurosporene synthase family protein [R] COG5621 Predicted secreted hydrolase gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1176 VAA049_1177 VAA049_1177 nhaA nhaA 1279688 1280836 + Na+/H+ antiporter NhaA nhaA: Na+/H+ antiporter NhaA~[P] COG3004 Na+/H+ antiporter gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1177 VAA049_1178 VAA049_1178 VAA049_1178 1281434 1284319 + 2%2C4-diaminobutyrate 4-transaminase family protein dat: 2%2C4-diaminobutyrate 4-transaminase family protein~[E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1178 VAA049_1179 VAA049_1179 VAA049_1179 1284333 1285577 + saccharopine dehydrogenase family protein [E] COG1748 Saccharopine dehydrogenase and related proteins gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1179 VAA049_118 VAA049_118 VAA049_118 124047 125273 + HDOD domain protein [T] COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_118 VAA049_1180 VAA049_1180 nspC nspC 1285843 1286976 + carboxynorspermidine decarboxylase nspC: carboxynorspermidine decarboxylase~[E] COG0019 Diaminopimelate decarboxylase gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1180 VAA049_1181 VAA049_1181 VAA049_1181 1287112 1287750 - ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1181 VAA049_1182 VAA049_1182 VAA049_1182 1287752 1289065 - type I secretion outer membrane%2C TolC family protein type_I_sec_TolC: type I secretion outer membrane%2C TolC family protein~[MU] COG1538 Outer membrane protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1182 VAA049_1183 VAA049_1183 VAA049_1183 1289486 1297507 + calx-beta domain protein gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1183 VAA049_1184 VAA049_1184 VAA049_1184 1297539 1302068 + hypothetical protein T1SS_VCA0849: type I secretion C-terminal target domain protein~[Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1184 VAA049_1185 VAA049_1185 VAA049_1185 1302176 1302724 - hypothetical protein conserved hypothetical protein~[S] COG3310 Uncharacterized protein conserved in bacteria gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1185 VAA049_1186 VAA049_1186 VAA049_1186 1302781 1303998 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1186 VAA049_1187 VAA049_1187 VAA049_1187 1304104 1304973 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1187 VAA049_1188 VAA049_1188 VAA049_1188 1305004 1305237 - glutaredoxin family protein [O] COG0695 Glutaredoxin and related proteins gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1188 VAA049_1189 VAA049_1189 VAA049_1189 1305411 1305917 + hypothetical protein conserved hypothetical protein~[R] COG1451 Predicted metal-dependent hydrolase gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1189 VAA049_119 VAA049_119 VAA049_119 125453 125923 - DPS family protein [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_119 VAA049_1190 VAA049_1190 VAA049_1190 1305914 1307002 + hypothetical protein conserved hypothetical protein~[R] COG3129 Predicted SAM-dependent methyltransferase gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1190 VAA049_1191 VAA049_1191 VAA049_1191 1307201 1307425 + hypothetical protein conserved hypothetical protein gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1191 VAA049_1192 VAA049_1192 pilF pilF 1307429 1308142 - type IV pilus biogenesis/stability protein PilW type_IV_pilW: type IV pilus biogenesis/stability protein PilW~[NU] COG3063 Tfp pilus assembly protein PilF gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1192 VAA049_1193 VAA049_1193 metA metA 1308351 1309292 - homoserine O-succinyltransferase metA: homoserine O-succinyltransferase~[E] COG1897 Homoserine trans-succinylase gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1193 VAA049_1194 VAA049_1194 VAA049_1194 1309433 1309807 + zeta toxin family protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1194 VAA049_1195 VAA049_1195 VAA049_1195 1309811 1310959 - ABC-2 type transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1195 VAA049_1196 VAA049_1196 VAA049_1196 1310956 1312104 - ABC-2 transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1196 VAA049_1197 VAA049_1197 VAA049_1197 1312123 1313097 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1197 VAA049_1198 VAA049_1198 VAA049_1198 1313109 1314539 - outer membrane efflux family protein [MU] COG1538 Outer membrane protein gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1198 VAA049_1199 VAA049_1199 VAA049_1199 1314707 1314940 - putative cation transport ATPase gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1199 VAA049_12 VAA049_12 VAA049_12 13614 13871 + putative glycyl-tRNA synthetase subunit alpha gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_12 VAA049_120 VAA049_120 VAA049_120 126093 126422 - hypothetical protein conserved hypothetical protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_120 VAA049_1200 VAA049_1200 VAA049_1200 1315270 1316886 + sensory box protein [T] COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1200 VAA049_1201 VAA049_1201 VAA049_1201 1316886 1317572 + response regulator [KT] COG4565 Response regulator of citrate/malate metabolism gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1201 VAA049_1202 VAA049_1202 VAA049_1202 1317638 1318414 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1202 VAA049_1203 VAA049_1203 VAA049_1203 1318442 1319419 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1203 VAA049_1204 VAA049_1204 VAA049_1204 1319551 1320354 + hypothetical protein conserved hypothetical protein gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1204 VAA049_1205 VAA049_1205 VAA049_1205 1320469 1321155 + GRF zinc finger family protein [L] COG0551 Zn-finger domain associated with topoisomerase type I gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1205 VAA049_1206 VAA049_1206 VAA049_1206 1321158 1322219 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1206 VAA049_1207 VAA049_1207 VAA049_1207 1322491 1322567 + tRNA-Val tRNA gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1207 VAA049_1208 VAA049_1208 VAA049_1208 1322589 1322665 + tRNA-Val tRNA gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1208 VAA049_1209 VAA049_1209 VAA049_1209 1322835 1323596 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1209 VAA049_121 VAA049_121 VAA049_121 126627 126995 + hypothetical protein conserved hypothetical protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_121 VAA049_1210 VAA049_1210 VAA049_1210 1323808 1325241 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1210 VAA049_1211 VAA049_1211 galT galT 1325685 1326749 + galactose-1-phosphate uridylyltransferase galT_1: galactose-1-phosphate uridylyltransferase~[C] COG1085 Galactose-1-phosphate uridylyltransferase gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1211 VAA049_1212 VAA049_1212 galK galK 1326815 1327981 + galactokinase gal_kin: galactokinase~[G] COG0153 Galactokinase gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1212 VAA049_1213 VAA049_1213 galM galM 1327984 1329036 + galactose mutarotase galM_Leloir: galactose mutarotase~[G] COG2017 Galactose mutarotase and related enzymes gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1213 VAA049_1214 VAA049_1214 VAA049_1214 1329054 1330274 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1214 VAA049_1215 VAA049_1215 VAA049_1215 1330426 1331280 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1215 VAA049_1216 VAA049_1216 VAA049_1216 1331518 1332276 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1216 VAA049_1217 VAA049_1217 alsS alsS 1332273 1333976 - acetolactate synthase%2C catabolic acolac_catab: acetolactate synthase%2C catabolic~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1217 VAA049_1218 VAA049_1218 budA budA 1334113 1334898 - alpha-acetolactate decarboxylase acetolac_decarb: alpha-acetolactate decarboxylase~[Q] COG3527 Alpha-acetolactate decarboxylase gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1218 VAA049_1219 VAA049_1219 VAA049_1219 1335850 1338423 - hypothetical protein conserved hypothetical protein~[S] COG3002 Uncharacterized protein conserved in bacteria gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1219 VAA049_122 VAA049_122 VAA049_122 127879 128502 + yhhN-like family protein [S] COG3714 Predicted membrane protein gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_122 VAA049_1220 VAA049_1220 VAA049_1220 1335022 1335885 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1220 VAA049_1221 VAA049_1221 VAA049_1221 1338420 1339913 - NADH-Ubiquinone/plastoquinone (complex I)%2C various chains family protein [CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter%2C MnhA subunit gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1221 VAA049_1222 VAA049_1222 VAA049_1222 1340089 1340961 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1222 VAA049_1223 VAA049_1223 VAA049_1223 1341025 1342695 + AMP-binding enzyme family protein [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1223 VAA049_1224 VAA049_1224 VAA049_1224 1342679 1342915 + hypothetical protein conserved hypothetical protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1224 VAA049_1225 VAA049_1225 VAA049_1225 1342917 1343738 + bacterial lipid A biosynthesis acyltransferase family protein [M] COG1560 Lauroyl/myristoyl acyltransferase gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1225 VAA049_1226 VAA049_1226 VAA049_1226 1343894 1344211 + ASCH domain protein [S] COG3097 Uncharacterized protein conserved in bacteria gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1226 VAA049_1227 VAA049_1227 VAA049_1227 1344241 1344699 + hypothetical protein conserved hypothetical protein~[S] COG3305 Predicted membrane protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1227 VAA049_1228 VAA049_1228 VAA049_1228 1344777 1345127 + hypothetical protein conserved hypothetical protein~[S] COG3169 Uncharacterized protein conserved in bacteria gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1228 VAA049_1229 VAA049_1229 VAA049_1229 1345272 1346657 - fumarase C family protein [C] COG0114 Fumarase gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1229 VAA049_123 VAA049_123 VAA049_123 128551 128817 - hypothetical protein conserved hypothetical protein~[S] COG3776 Predicted membrane protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_123 VAA049_1230 VAA049_1230 VAA049_1230 1346673 1347053 - hypothetical protein conserved hypothetical protein gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1230 VAA049_1231 VAA049_1231 VAA049_1231 1347576 1348913 + bacterial Cytochrome Ubiquinol Oxidase family protein [C] COG1271 Cytochrome bd-type quinol oxidase%2C subunit 1 gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1231 VAA049_1232 VAA049_1232 cydB cydB 1348910 1349902 + cytochrome d ubiquinol oxidase%2C subunit II cydB: cytochrome d ubiquinol oxidase%2C subunit II~[C] COG1294 Cytochrome bd-type quinol oxidase%2C subunit 2 gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1232 VAA049_1233 VAA049_1233 VAA049_1233 1349976 1350677 - ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1233 VAA049_1234 VAA049_1234 VAA049_1234 1350677 1351954 - ftsX-like permease family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1234 VAA049_1235 VAA049_1235 VAA049_1235 1351958 1353172 - ftsX-like permease family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1235 VAA049_1236 VAA049_1236 VAA049_1236 1353172 1354431 - outer membrane efflux family protein [MU] COG1538 Outer membrane protein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1236 VAA049_1237 VAA049_1237 VAA049_1237 1354424 1355557 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1237 VAA049_1238 VAA049_1238 VAA049_1238 1355734 1356858 - metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1238 VAA049_1239 VAA049_1239 VAA049_1239 1356970 1357899 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1239 VAA049_124 VAA049_124 rsmD rsmD 128814 129413 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [L] COG0742 N6-adenine-specific methylase gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_124 VAA049_1240 VAA049_1240 katG katG 1357964 1360138 - catalase/peroxidase HPI cat_per_HPI: catalase/peroxidase HPI~[P] COG0376 Catalase (peroxidase I) gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1240 VAA049_1241 VAA049_1241 VAA049_1241 1360551 1361987 + glycosyl hydrolase 1 family protein [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1241 VAA049_1242 VAA049_1242 VAA049_1242 1362050 1363057 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1242 VAA049_1243 VAA049_1243 VAA049_1243 1363192 1363554 + endoribonuclease L-PSP family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1243 VAA049_1244 VAA049_1244 VAA049_1244 1363565 1364035 + yhcH/YjgK/YiaL family protein [G] COG2731 Beta-galactosidase%2C beta subunit gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1244 VAA049_1245 VAA049_1245 VAA049_1245 1364111 1364821 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1245 VAA049_1246 VAA049_1246 VAA049_1246 1364852 1365613 - deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1246 VAA049_1247 VAA049_1247 VAA049_1247 1365634 1366806 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1247 VAA049_1248 VAA049_1248 VAA049_1248 1366796 1367638 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1248 VAA049_1249 VAA049_1249 VAA049_1249 1367648 1368529 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1249 VAA049_125 VAA049_125 ftsY ftsY 129617 130780 + signal recognition particle-docking protein FtsY ftsY: signal recognition particle-docking protein FtsY~[U] COG0552 Signal recognition particle GTPase gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_125 VAA049_1250 VAA049_1250 VAA049_1250 1368605 1369909 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1250 VAA049_1251 VAA049_1251 VAA049_1251 1370228 1370986 + hypothetical protein conserved hypothetical protein gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1251 VAA049_1252 VAA049_1252 VAA049_1252 1370986 1372359 + motA/TolQ/ExbB proton channel family protein [U] COG0811 Biopolymer transport proteins gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1252 VAA049_1253 VAA049_1253 VAA049_1253 1372369 1372908 + motA/TolQ/ExbB proton channel family protein [U] COG0811 Biopolymer transport proteins gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1253 VAA049_1254 VAA049_1254 VAA049_1254 1372905 1373309 + biopolymer transport ExbD/TolR family protein [U] COG0848 Biopolymer transport protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1254 VAA049_1255 VAA049_1255 VAA049_1255 1373309 1373929 + hypothetical protein tonB_Cterm: TonB family C-terminal domain protein~[M] COG0810 Periplasmic protein TonB%2C links inner and outer membranes gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1255 VAA049_1256 VAA049_1256 VAA049_1256 1373926 1375104 + TPR repeat family protein [R] COG0457 FOG: TPR repeat gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1256 VAA049_1257 VAA049_1257 VAA049_1257 1375407 1376255 + ATP dependent DNA ligase domain protein [L] COG1793 ATP-dependent DNA ligase gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1257 VAA049_1258 VAA049_1258 VAA049_1258 1376262 1377245 - hypothetical protein conserved hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1258 VAA049_1259 VAA049_1259 norM norM 1377449 1378822 - multidrug resistance protein norM [V] COG0534 Na+-driven multidrug efflux pump gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1259 VAA049_126 VAA049_126 ftsE ftsE 130829 131503 + cell division ATP-binding protein FtsE ftsE: cell division ATP-binding protein FtsE~[D] COG2884 Predicted ATPase involved in cell division gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_126 VAA049_1260 VAA049_1260 VAA049_1260 1379077 1379280 - cysteine-rich CPXCG family protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1260 VAA049_1261 VAA049_1261 VAA049_1261 1379438 1380304 - fructosamine kinase family protein [G] COG3001 Fructosamine-3-kinase gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1261 VAA049_1262 VAA049_1262 VAA049_1262 1380827 1381168 + hypothetical protein conserved hypothetical protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1262 VAA049_1263 VAA049_1263 VAA049_1263 1381179 1381679 - nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1263 VAA049_1264 VAA049_1264 VAA049_1264 1381768 1383789 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1264 VAA049_1265 VAA049_1265 VAA049_1265 1383791 1384582 - fatty acid hydroxylase superfamily protein [I] COG3000 Sterol desaturase gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1265 VAA049_1266 VAA049_1266 VAA049_1266 1384682 1385419 + DTW domain protein [S] COG3148 Uncharacterized conserved protein gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1266 VAA049_1267 VAA049_1267 VAA049_1267 1385583 1386491 + glucokinase family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1267 VAA049_1268 VAA049_1268 VAA049_1268 1386698 1386973 - hypothetical protein conserved hypothetical protein gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1268 VAA049_1269 VAA049_1269 VAA049_1269 1387189 1387968 + bacterial extracellular solute-binding s%2C 3 family protein gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1269 VAA049_127 VAA049_127 VAA049_127 131493 132485 + ftsX-like permease family protein [D] COG2177 Cell division protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_127 VAA049_1270 VAA049_1270 mobB mobB 1388058 1389878 - molybdopterin-guanine dinucleotide biosynthesis protein B mobB: molybdopterin-guanine dinucleotide biosynthesis protein B~[H] COG0303 Molybdopterin biosynthesis enzyme gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1270 VAA049_1271 VAA049_1271 mobA mobA 1389875 1390405 - molybdenum cofactor guanylyltransferase molyb_mobA: molybdenum cofactor guanylyltransferase~[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1271 VAA049_1272 VAA049_1272 VAA049_1272 1390440 1391162 - ABC transporter family protein [P] COG1122 ABC-type cobalt transport system%2C ATPase component gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1272 VAA049_1273 VAA049_1273 VAA049_1273 1391171 1391869 - binding--dependent transport system inner membrane component family protein [H] COG4662 ABC-type tungstate transport system%2C periplasmic component gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1273 VAA049_1274 VAA049_1274 VAA049_1274 1391876 1392691 - bacterial extracellular solute-binding family protein [H] COG2998 ABC-type tungstate transport system%2C permease component gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1274 VAA049_1275 VAA049_1275 VAA049_1275 1392995 1394449 + AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1275 VAA049_1276 VAA049_1276 VAA049_1276 1394439 1396472 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1276 VAA049_1277 VAA049_1277 ccmA ccmA 1396684 1398276 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1277 VAA049_1278 VAA049_1278 VAA049_1278 1398382 1399215 - fdhD/NarQ family protein [C] COG1526 Uncharacterized protein required for formate dehydrogenase activity gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1278 VAA049_1279 VAA049_1279 VAA049_1279 1399440 1399916 + hypothetical protein conserved hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1279 VAA049_128 VAA049_128 rpoH rpoH 132655 133515 + alternative sigma factor RpoH rpoH_proteo: alternative sigma factor RpoH~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_128 VAA049_1280 VAA049_1280 VAA049_1280 1399906 1400517 + hypothetical protein conserved hypothetical protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1280 VAA049_1281 VAA049_1281 VAA049_1281 1400715 1402376 + 4Fe-4S binding domain protein [C] COG1145 Ferredoxin gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1281 VAA049_1282 VAA049_1282 VAA049_1282 1402402 1403058 + nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1282 VAA049_1283 VAA049_1283 VAA049_1283 1403135 1403332 + Tat (twin-arginine translocation) pathway signal sequence domain protein TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1283 VAA049_1284 VAA049_1284 VAA049_1284 1403344 1406199 + Tat (twin-arginine translocation) pathway signal sequence domain protein TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1284 VAA049_1285 VAA049_1285 VAA049_1285 1406211 1406819 + 4Fe-4S dicluster domain protein [C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1285 VAA049_1286 VAA049_1286 VAA049_1286 1406826 1407893 + formate dehydrogenase%2C gamma subunit formate-DH-gamm: formate dehydrogenase%2C gamma subunit~[C] COG2864 Cytochrome b subunit of formate dehydrogenase gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1286 VAA049_1287 VAA049_1287 VAA049_1287 1407880 1408302 + hypothetical protein conserved hypothetical protein gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1287 VAA049_1288 VAA049_1288 VAA049_1288 1408439 1409179 + sir2 family protein [K] COG0846 NAD-dependent protein deacetylases%2C SIR2 family gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1288 VAA049_1289 VAA049_1289 VAA049_1289 1409351 1409833 - hypothetical protein conserved hypothetical protein~[S] COG1666 Uncharacterized protein conserved in bacteria gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1289 VAA049_129 VAA049_129 VAA049_129 133727 135127 - pyridine nucleotide-disulfide oxidoreductase family protein [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_129 VAA049_1290 VAA049_1290 VAA049_1290 1409845 1410906 - 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1290 VAA049_1291 VAA049_1291 VAA049_1291 1411651 1413000 - hypothetical protein conserved hypothetical protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1291 VAA049_1292 VAA049_1292 VAA049_1292 1411182 1411658 + hypothetical protein conserved hypothetical protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1292 VAA049_1293 VAA049_1293 VAA049_1293 1413102 1413935 + S1 domain protein [S] COG2996 Uncharacterized protein conserved in bacteria gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1293 VAA049_1294 VAA049_1294 VAA049_1294 1414117 1415538 - NOL1/NOP2/sun family RNA methylase domain protein nop2p: NOL1/NOP2/sun family RNA methylase domain protein~[J] COG0144 tRNA and rRNA cytosine-C5-methylases gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1294 VAA049_1295 VAA049_1295 VAA049_1295 1415785 1418424 - mce related family protein [R] COG3008 Paraquat-inducible protein B gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1295 VAA049_1296 VAA049_1296 VAA049_1296 1418434 1419678 - integral membrane%2C PqiA family protein pqiA_fam: integral membrane%2C PqiA family protein~[S] COG2995 Uncharacterized paraquat-inducible protein A gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1296 VAA049_1297 VAA049_1297 VAA049_1297 1419727 1421523 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1297 VAA049_1298 VAA049_1298 VAA049_1298 1421609 1422082 + GAF domain protein [T] COG1956 GAF domain-containing protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1298 VAA049_1299 VAA049_1299 VAA049_1299 1422183 1422809 + proQ/FINO family protein [T] COG3109 Activator of osmoprotectant transporter ProP gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1299 VAA049_13 VAA049_13 VAA049_13 13958 14206 - sulfurtransferase TusA family protein [O] COG0425 Predicted redox protein%2C regulator of disulfide bond formation gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_13 VAA049_130 VAA049_130 VAA049_130 135435 136076 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_130 VAA049_1300 VAA049_1300 VAA049_1300 1422827 1424824 + hypothetical protein prc: C-terminal processing peptidase family protein~[M] COG0793 Periplasmic protease gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1300 VAA049_1301 VAA049_1301 VAA049_1301 1424978 1425649 + hypothetical protein conserved hypothetical protein gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1301 VAA049_1302 VAA049_1302 pepN pepN 1425848 1428454 + aminopeptidase N pepN_proteo: aminopeptidase N~[E] COG0308 Aminopeptidase N gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1302 VAA049_1303 VAA049_1303 VAA049_1303 1428913 1433754 + bacterial NAD-glutamate dehydrogenase family protein [E] COG2902 NAD-specific glutamate dehydrogenase gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1303 VAA049_1304 VAA049_1304 pyrD pyrD 1433828 1434838 + dihydroorotate dehydrogenase pyrD_sub2: dihydroorotate dehydrogenase~[F] COG0167 Dihydroorotate dehydrogenase gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1304 VAA049_1305 VAA049_1305 VAA049_1305 1434993 1435535 + hypothetical protein conserved hypothetical protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1305 VAA049_1306 VAA049_1306 VAA049_1306 1435996 1438122 + ribosomal L11 methyltransferase family protein [L] COG0116 Predicted N6-adenine-specific DNA methylase gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1306 VAA049_1307 VAA049_1307 VAA049_1307 1438131 1438373 + glutaredoxin family protein [OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1307 VAA049_1308 VAA049_1308 ccmA ccmA 1438351 1440270 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1308 VAA049_1309 VAA049_1309 VAA049_1309 1440276 1441979 + GlyGly-CTERM domain protein glyGly_CTERM: GlyGly-CTERM domain protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1309 VAA049_131 VAA049_131 VAA049_131 136116 136487 + hypothetical protein conserved hypothetical protein gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_131 VAA049_1310 VAA049_1310 VAA049_1310 1442146 1442319 + ribosome modulation factor family protein [J] COG3130 Ribosome modulation factor gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1310 VAA049_1311 VAA049_1311 fabA fabA 1442403 1442921 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA~[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1311 VAA049_1312 VAA049_1312 VAA049_1312 1442986 1444635 - hypothetical protein lon protease (S16) C-terminal proteolytic domain protein~[O] COG1067 Predicted ATP-dependent protease gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1312 VAA049_1313 VAA049_1313 VAA049_1313 1444799 1445248 + organizer of macrodomain of Terminus of chromosome family protein [S] COG3120 Uncharacterized protein conserved in bacteria gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1313 VAA049_1314 VAA049_1314 VAA049_1314 1445268 1445585 + hypothetical protein conserved hypothetical protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1314 VAA049_1315 VAA049_1315 VAA049_1315 1445723 1446055 + hypothetical protein conserved hypothetical protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1315 VAA049_1316 VAA049_1316 VAA049_1316 1447088 1447741 - hypothetical protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1316 VAA049_1317 VAA049_1317 VAA049_1317 1447790 1448332 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1317 VAA049_1318 VAA049_1318 VAA049_1318 1449388 1450080 + phage/plasmid replication rep_II_X: phage/plasmid replication%2C gene II/X family protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1318 VAA049_1319 VAA049_1319 VAA049_1319 1450085 1450369 + hypothetical protein conserved hypothetical protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1319 VAA049_132 VAA049_132 trmA trmA 136524 137633 - tRNA (uracil(54)-C(5))-methyltransferase trmA_only: tRNA (uracil(54)-C(5))-methyltransferase~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_132 VAA049_1320 VAA049_1320 VAA049_1320 1450499 1451191 + helix-turn-helix family protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1320 VAA049_1321 VAA049_1321 VAA049_1321 1451269 1451436 + hypothetical protein gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1321 VAA049_1322 VAA049_1322 VAA049_1322 1451429 1452016 + helix-turn-helix family protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1322 VAA049_1323 VAA049_1323 VAA049_1323 1452007 1452171 + hypothetical protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1323 VAA049_1324 VAA049_1324 VAA049_1324 1453013 1453666 - hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1324 VAA049_1325 VAA049_1325 VAA049_1325 1453715 1454257 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1325 VAA049_1326 VAA049_1326 VAA049_1326 1455313 1456005 + phage/plasmid replication rep_II_X: phage/plasmid replication%2C gene II/X family protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1326 VAA049_1327 VAA049_1327 VAA049_1327 1456010 1456294 + hypothetical protein conserved hypothetical protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1327 VAA049_1328 VAA049_1328 VAA049_1328 1456424 1457116 + helix-turn-helix family protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1328 VAA049_1329 VAA049_1329 VAA049_1329 1457194 1457361 + hypothetical protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1329 VAA049_133 VAA049_133 VAA049_133 138031 139863 + tonB dependent receptor family protein [H] COG4206 Outer membrane cobalamin receptor protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_133 VAA049_1330 VAA049_1330 VAA049_1330 1457354 1457941 + helix-turn-helix family protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1330 VAA049_1331 VAA049_1331 VAA049_1331 1458408 1458620 - hypothetical protein conserved hypothetical protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1331 VAA049_1332 VAA049_1332 VAA049_1332 1458739 1460031 + phage/plasmid replication rep_II_X: phage/plasmid replication%2C gene II/X family protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1332 VAA049_1333 VAA049_1333 VAA049_1333 1460044 1460346 + helix-destabilising family protein gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1333 VAA049_1334 VAA049_1334 VAA049_1334 1460464 1460556 + putative membrane protein gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1334 VAA049_1335 VAA049_1335 VAA049_1335 1460685 1460939 + hypothetical protein gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1335 VAA049_1336 VAA049_1336 VAA049_1336 1461005 1462414 + hypothetical protein conserved hypothetical protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1336 VAA049_1337 VAA049_1337 VAA049_1337 1462417 1462737 + hypothetical protein gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1337 VAA049_1338 VAA049_1338 VAA049_1338 1462740 1464050 + zonular occludens toxin family protein gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1338 VAA049_1339 VAA049_1339 VAA049_1339 1464624 1464836 - hypothetical protein conserved hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1339 VAA049_134 VAA049_134 VAA049_134 139937 141577 - extracellular subtilisin-like serine proteinase [O] COG1404 Subtilisin-like serine proteases gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_134 VAA049_1340 VAA049_1340 VAA049_1340 1464955 1466248 + phage/plasmid replication pseudogene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1340 VAA049_1342 VAA049_1342 VAA049_1342 1466261 1466563 + helix-destabilising family protein gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1342 VAA049_1343 VAA049_1343 VAA049_1343 1466589 1466774 + hypothetical protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1343 VAA049_1344 VAA049_1344 VAA049_1344 1466903 1467157 + hypothetical protein gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1344 VAA049_1345 VAA049_1345 VAA049_1345 1467223 1468632 + hypothetical protein conserved hypothetical protein gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1345 VAA049_1346 VAA049_1346 VAA049_1346 1468635 1468955 + hypothetical protein gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1346 VAA049_1347 VAA049_1347 VAA049_1347 1468958 1470268 + zonular occludens toxin family protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1347 VAA049_1348 VAA049_1348 VAA049_1348 1470842 1471054 - hypothetical protein conserved hypothetical protein gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1348 VAA049_1349 VAA049_1349 VAA049_1349 1471173 1472465 + phage/plasmid replication rep_II_X: phage/plasmid replication%2C gene II/X family protein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1349 VAA049_135 VAA049_135 VAA049_135 142733 143191 - RNA recognition motif family protein [R] COG0724 RNA-binding proteins (RRM domain) gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_135 VAA049_1350 VAA049_1350 VAA049_1350 1472478 1472780 + helix-destabilising family protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1350 VAA049_1351 VAA049_1351 VAA049_1351 1472898 1472990 + putative membrane protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1351 VAA049_1352 VAA049_1352 VAA049_1352 1473119 1473373 + hypothetical protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1352 VAA049_1353 VAA049_1353 VAA049_1353 1473439 1474848 + hypothetical protein conserved hypothetical protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1353 VAA049_1354 VAA049_1354 VAA049_1354 1474851 1475171 + hypothetical protein gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1354 VAA049_1355 VAA049_1355 VAA049_1355 1475174 1476484 + zonular occludens toxin family protein gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1355 VAA049_1356 VAA049_1356 VAA049_1356 1476938 1490575 - RTX toxin RtxA [Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1356 VAA049_1357 VAA049_1357 VAA049_1357 1490599 1490994 - RTX toxin acyltransferase family protein [O] COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein) gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1357 VAA049_1358 VAA049_1358 VAA049_1358 1491086 1491433 - putative peptide chain release factor 1 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1358 VAA049_1359 VAA049_1359 VAA049_1359 1492280 1493965 + type I secretion system ATPase family protein type_I_sec_HlyB: type I secretion system ATPase family protein~[V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1359 VAA049_136 VAA049_136 murI murI 141970 142767 + glutamate racemase glut_race: glutamate racemase~[M] COG0796 Glutamate racemase gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_136 VAA049_1360 VAA049_1360 VAA049_1360 1493962 1495323 + type I secretion membrane fusion%2C HlyD family protein type_I_hlyD: type I secretion membrane fusion%2C HlyD family protein~[M] COG0845 Membrane-fusion protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1360 VAA049_1361 VAA049_1361 VAA049_1361 1495324 1497489 + type I secretion system ATPase family protein type_I_sec_HlyB: type I secretion system ATPase family protein~[V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1361 VAA049_1362 VAA049_1362 VAA049_1362 1497550 1499262 - his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1362 VAA049_1363 VAA049_1363 VAA049_1363 1499265 1500452 - FIST N domain protein [S] COG3287 Uncharacterized conserved protein gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1363 VAA049_1364 VAA049_1364 VAA049_1364 1500551 1500907 - hypothetical protein conserved hypothetical protein gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1364 VAA049_1365 VAA049_1365 ccoN ccoN 1501166 1502593 + cytochrome c oxidase%2C cbb3-type%2C subunit I ccoN: cytochrome c oxidase%2C cbb3-type%2C subunit I~[O] COG3278 Cbb3-type cytochrome oxidase%2C subunit 1 gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1365 VAA049_1366 VAA049_1366 ccoO ccoO 1502607 1503227 + cytochrome c oxidase%2C cbb3-type%2C subunit II ccoO: cytochrome c oxidase%2C cbb3-type%2C subunit II~[C] COG2993 Cbb3-type cytochrome oxidase%2C cytochrome c subunit gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1366 VAA049_1367 VAA049_1367 VAA049_1367 1503239 1503403 + cbb3-type cytochrome oxidase component FixQ family protein [O] COG4736 Cbb3-type cytochrome oxidase%2C subunit 3 gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1367 VAA049_1368 VAA049_1368 ccoP ccoP 1503411 1504391 + cytochrome c oxidase%2C cbb3-type%2C subunit III ccoP: cytochrome c oxidase%2C cbb3-type%2C subunit III~[C] COG2010 Cytochrome c%2C mono- and diheme variants gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1368 VAA049_1369 VAA049_1369 VAA049_1369 1504470 1504946 + fixH family protein [S] COG3198 Uncharacterized protein conserved in bacteria gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1369 VAA049_137 VAA049_137 VAA049_137 143750 145280 + 16S ribosomal RNA rRNA gene136 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_137 VAA049_1370 VAA049_1370 VAA049_1370 1504951 1507323 + copper-translocating P-type ATPase ATPase-IB1_Cu: copper-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1370 VAA049_1371 VAA049_1371 ccoS ccoS 1507327 1507491 + cytochrome oxidase maturation protein%2C cbb3-type ccoS: cytochrome oxidase maturation protein%2C cbb3-type~[P] COG3197 Uncharacterized protein%2C possibly involved in nitrogen fixation gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1371 VAA049_1372 VAA049_1372 VAA049_1372 1507488 1508162 + cytochrome C biogenesis transmembrane region family protein [S] COG2836 Uncharacterized conserved protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1372 VAA049_1373 VAA049_1373 VAA049_1373 1508252 1509004 + bacterial regulatory s%2C crp family protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1373 VAA049_1374 VAA049_1374 VAA049_1374 1509134 1510081 + universal stress family protein [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1374 VAA049_1375 VAA049_1375 VAA049_1375 1510208 1511140 + PP-loop family protein [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1375 VAA049_1376 VAA049_1376 VAA049_1376 1511217 1511876 - hypothetical protein conserved hypothetical protein gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1376 VAA049_1377 VAA049_1377 VAA049_1377 1511878 1512678 - mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein [R] COG2992 Uncharacterized FlgJ-related protein gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1377 VAA049_1378 VAA049_1378 VAA049_1378 1512671 1513477 - hypothetical protein conserved hypothetical protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1378 VAA049_1379 VAA049_1379 VAA049_1379 1513820 1514935 + polyamine ABC transporter%2C ATP-binding family protein potA: polyamine ABC transporter%2C ATP-binding family protein~[E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1379 VAA049_138 VAA049_138 VAA049_138 145354 145429 + tRNA-Glu tRNA gene137 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_138 VAA049_1380 VAA049_1380 VAA049_1380 1514919 1515776 + binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1380 VAA049_1381 VAA049_1381 VAA049_1381 1515776 1516546 + binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1381 VAA049_1382 VAA049_1382 VAA049_1382 1516649 1517680 + bacterial extracellular solute-binding family protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1382 VAA049_1383 VAA049_1383 VAA049_1383 1517792 1518829 + bacterial extracellular solute-binding family protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1383 VAA049_1384 VAA049_1384 VAA049_1384 1518978 1519712 - hypothetical protein conserved hypothetical protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1384 VAA049_1385 VAA049_1385 VAA049_1385 1519729 1519887 - putative membrane protein gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1385 VAA049_1386 VAA049_1386 agcS agcS 1520390 1521766 + amino acid carrier family protein agcS: amino acid carrier family protein~[E] COG1115 Na+/alanine symporter gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1386 VAA049_1387 VAA049_1387 VAA049_1387 1521839 1522477 - lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1387 VAA049_1388 VAA049_1388 VAA049_1388 1522565 1523296 - hypothetical protein conserved hypothetical protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1388 VAA049_1389 VAA049_1389 VAA049_1389 1523293 1525422 - hypothetical protein conserved hypothetical protein gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1389 VAA049_139 VAA049_139 VAA049_139 145719 148603 + 23S ribosomal RNA rRNA gene138 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_139 VAA049_1390 VAA049_1390 VAA049_1390 1525419 1526207 - hypothetical protein conserved hypothetical protein gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1390 VAA049_1391 VAA049_1391 VAA049_1391 1526204 1528255 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1391 VAA049_1392 VAA049_1392 VAA049_1392 1528383 1528901 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1392 VAA049_1393 VAA049_1393 VAA049_1393 1529189 1530673 + carboxypeptidase Taq (M32) metallopeptidase family protein [E] COG2317 Zn-dependent carboxypeptidase gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1393 VAA049_1394 VAA049_1394 VAA049_1394 1530895 1532631 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1394 VAA049_1395 VAA049_1395 VAA049_1395 1532706 1534241 - drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein efflux_EmrB: drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1395 VAA049_1396 VAA049_1396 VAA049_1396 1534251 1535438 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[V] COG1566 Multidrug resistance efflux pump gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1396 VAA049_1397 VAA049_1397 VAA049_1397 1535452 1536906 - efflux transporter%2C outer membrane factor (OMF) lipo%2C NodT family protein outer_NodT: efflux transporter%2C outer membrane factor (OMF) lipo%2C NodT family protein~[MU] COG1538 Outer membrane protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1397 VAA049_1398 VAA049_1398 VAA049_1398 1537013 1537615 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1398 VAA049_1399 VAA049_1399 VAA049_1399 1537674 1538867 - hypothetical protein SNF2 family N-terminal domain protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1399 VAA049_14 VAA049_14 VAA049_14 14342 14527 + putative membrane protein gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_14 VAA049_140 VAA049_140 VAA049_140 148717 148831 + 5S ribosomal RNA rRNA gene139 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_140 VAA049_1400 VAA049_1400 VAA049_1400 1539049 1540347 - sensory box protein [T] COG2202 FOG: PAS/PAC domain gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1400 VAA049_1401 VAA049_1401 VAA049_1401 1540443 1542134 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1401 VAA049_1402 VAA049_1402 VAA049_1402 1542726 1544651 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1402 VAA049_1403 VAA049_1403 VAA049_1403 1544664 1546226 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1403 VAA049_1404 VAA049_1404 VAA049_1404 1546247 1547323 + cheB methylesterase family protein [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1404 VAA049_1405 VAA049_1405 VAA049_1405 1547310 1547966 + HEAT repeat family protein gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1405 VAA049_1406 VAA049_1406 VAA049_1406 1547977 1548822 + cheR methyltransferase%2C SAM binding domain protein [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1406 VAA049_1407 VAA049_1407 VAA049_1407 1548822 1549193 + response regulator [T] COG0784 FOG: CheY-like receiver gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1407 VAA049_1408 VAA049_1408 VAA049_1408 1549202 1551475 + cheW-like domain protein [NT] COG0643 Chemotaxis protein histidine kinase and related kinases gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1408 VAA049_1409 VAA049_1409 VAA049_1409 1551465 1551725 + hypothetical protein conserved hypothetical protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1409 VAA049_141 VAA049_141 VAA049_141 149196 150726 + 16S ribosomal RNA rRNA gene140 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_141 VAA049_1410 VAA049_1410 VAA049_1410 1551718 1552098 + response regulator [T] COG0784 FOG: CheY-like receiver gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1410 VAA049_1411 VAA049_1411 VAA049_1411 1552106 1553341 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1411 VAA049_1412 VAA049_1412 VAA049_1412 1553396 1553710 - small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1412 VAA049_1413 VAA049_1413 cry2 cry2 1553870 1555384 - cryptochrome-like protein cry2 [L] COG0415 Deoxyribodipyrimidine photolyase gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1413 VAA049_1414 VAA049_1414 VAA049_1414 1555540 1556946 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1414 VAA049_1415 VAA049_1415 VAA049_1415 1557033 1557983 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1415 VAA049_1416 VAA049_1416 VAA049_1416 1558370 1559386 - lipoyltransferase and lipoate-ligase family protein lipoyltrans: lipoyltransferase and lipoate-ligase family protein~[H] COG0095 Lipoate-protein ligase A gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1416 VAA049_1417 VAA049_1417 VAA049_1417 1559511 1560863 - hydantoinase/oxoprolinase family protein [O] COG0443 Molecular chaperone gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1417 VAA049_1418 VAA049_1418 VAA049_1418 1561081 1561563 - ompA-like transmembrane domain protein gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1418 VAA049_1419 VAA049_1419 hrpA hrpA 1561703 1565632 - RNA helicase HrpA DEAH_box_HrpA: RNA helicase HrpA~[L] COG1643 HrpA-like helicases gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1419 VAA049_142 VAA049_142 VAA049_142 150800 150875 + tRNA-Glu tRNA gene141 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_142 VAA049_1420 VAA049_1420 VAA049_1420 1565834 1566184 + hypothetical protein conserved hypothetical protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1420 VAA049_1421 VAA049_1421 VAA049_1421 1566237 1566695 + tellurite resistance TerB family protein [S] COG4103 Uncharacterized protein conserved in bacteria gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1421 VAA049_1422 VAA049_1422 VAA049_1422 1566797 1566925 - hypothetical protein conserved hypothetical protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1422 VAA049_1423 VAA049_1423 VAA049_1423 1566981 1567511 - exonuclease family protein [R] COG5018 Inhibitor of the KinA pathway to sporulation%2C predicted exonuclease gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1423 VAA049_1424 VAA049_1424 VAA049_1424 1567529 1569112 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG3614 Predicted periplasmic ligand-binding sensor domain gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1424 VAA049_1425 VAA049_1425 VAA049_1425 1569650 1570282 + hypothetical protein conserved hypothetical protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1425 VAA049_1426 VAA049_1426 VAA049_1426 1570282 1572204 + hsp70 family protein [O] COG0443 Molecular chaperone gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1426 VAA049_1427 VAA049_1427 VAA049_1427 1572439 1575267 + DNA-K related family protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1427 VAA049_1428 VAA049_1428 VAA049_1428 1575380 1576456 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1428 VAA049_1429 VAA049_1429 VAA049_1429 1576932 1577612 + hypothetical protein conserved hypothetical protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1429 VAA049_143 VAA049_143 VAA049_143 150895 150969 + tRNA-Lys tRNA gene142 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_143 VAA049_1430 VAA049_1430 VAA049_1430 1577663 1578994 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1430 VAA049_1431 VAA049_1431 VAA049_1431 1578991 1580007 - NMT1-like family protein [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1431 VAA049_1432 VAA049_1432 VAA049_1432 1580164 1580388 - hypothetical protein conserved hypothetical protein gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1432 VAA049_1433 VAA049_1433 queC queC 1582558 1583253 - queuosine biosynthesis protein QueC [R] COG0603 Predicted PP-loop superfamily ATPase gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1433 VAA049_1434 VAA049_1434 VAA049_1434 1580640 1582586 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[R] COG0457 FOG: TPR repeat gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1434 VAA049_1435 VAA049_1435 VAA049_1435 1583266 1583916 - putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE~[O] COG0602 Organic radical activating enzymes gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1435 VAA049_1436 VAA049_1436 VAA049_1436 1583981 1584133 + hypothetical protein gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1436 VAA049_1437 VAA049_1437 VAA049_1437 1584279 1585100 + HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1437 VAA049_1438 VAA049_1438 VAA049_1438 1585176 1586114 - hypothetical protein cysG_Nterm: siroheme synthase%2C N-terminal domain protein~[H] COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1438 VAA049_1439 VAA049_1439 VAA049_1439 1586570 1587598 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1439 VAA049_144 VAA049_144 VAA049_144 151000 151075 + tRNA-Val tRNA gene143 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_144 VAA049_1440 VAA049_1440 VAA049_1440 1587724 1588929 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4597 ABC-type amino acid transport system%2C permease component gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1440 VAA049_1441 VAA049_1441 VAA049_1441 1588932 1590029 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1441 VAA049_1442 VAA049_1442 VAA049_1442 1590052 1590807 + ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1442 VAA049_1443 VAA049_1443 VAA049_1443 1591052 1591723 + inhibitor of apoptosis-promoting Bax1 family protein [R] COG0670 Integral membrane protein%2C interacts with FtsH gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1443 VAA049_1444 VAA049_1444 tusE tusE 1591837 1592166 + sulfur relay%2C TusE/DsrC/DsvC family protein dsrC_tusE_dsvC: sulfur relay%2C TusE/DsrC/DsvC family protein~[P] COG2920 Dissimilatory sulfite reductase (desulfoviridin)%2C gamma subunit gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1444 VAA049_1445 VAA049_1445 VAA049_1445 1592232 1592507 - acylphosphatase family protein [C] COG1254 Acylphosphatases gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1445 VAA049_1446 VAA049_1446 VAA049_1446 1592754 1593947 + N2%2CN2-dimethylguanosine tRNA methyltransferase family protein [R] COG1092 Predicted SAM-dependent methyltransferases gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1446 VAA049_1447 VAA049_1447 VAA049_1447 1593989 1596919 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1447 VAA049_1448 VAA049_1448 VAA049_1448 1597570 1598043 + ahpC/TSA family protein [O] COG0678 Peroxiredoxin gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1448 VAA049_1449 VAA049_1449 VAA049_1449 1598149 1602144 - sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1449 VAA049_1450 VAA049_1450 maiA maiA 1603387 1604031 - maleylacetoacetate isomerase maiA: maleylacetoacetate isomerase~[O] COG0625 Glutathione S-transferase gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1450 VAA049_1451 VAA049_1451 VAA049_1451 1602266 1603405 + response regulator [KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1451 VAA049_1452 VAA049_1452 VAA049_1452 1604031 1605050 - fumarylacetoacetate (FAA) hydrolase family protein [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1452 VAA049_1453 VAA049_1453 VAA049_1453 1605057 1606193 - homogentisate 1%2C2-dioxygenase family protein [Q] COG3508 Homogentisate 1%2C2-dioxygenase gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1453 VAA049_1454 VAA049_1454 hppD hppD 1606186 1607259 - 4-hydroxyphenylpyruvate dioxygenase 4HPPD: 4-hydroxyphenylpyruvate dioxygenase~[ER] COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1454 VAA049_1455 VAA049_1455 VAA049_1455 1607719 1608825 + peptidase M20/M25/M40 family protein [E] COG2195 Di- and tripeptidases gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1455 VAA049_1456 VAA049_1456 VAA049_1456 1608891 1610288 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1456 VAA049_1457 VAA049_1457 VAA049_1457 1610369 1610845 - acetyltransferase [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1457 VAA049_1458 VAA049_1458 VAA049_1458 1611019 1612896 - AMP-binding enzyme family protein [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1458 VAA049_1459 VAA049_1459 prpF prpF 1612901 1614091 - putative AcnD-accessory protein PrpF prpF: putative AcnD-accessory protein PrpF~[S] COG2828 Uncharacterized protein conserved in bacteria gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1459 VAA049_146 VAA049_146 VAA049_146 151420 154304 + 23S ribosomal RNA rRNA gene144 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_146 VAA049_1460 VAA049_1460 acnD acnD 1614112 1616718 - 2-methylisocitrate dehydratase%2C Fe/S-dependent 2met_isocit_dHY: 2-methylisocitrate dehydratase%2C Fe/S-dependent~[C] COG1048 Aconitase A gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1460 VAA049_1461 VAA049_1461 VAA049_1461 1616828 1617961 - 2-methylcitrate synthase/citrate synthase II family protein cit_synth_II: 2-methylcitrate synthase/citrate synthase II family protein~[C] COG0372 Citrate synthase gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1461 VAA049_1462 VAA049_1462 prpB prpB 1618137 1619033 - methylisocitrate lyase prpB: methylisocitrate lyase~[G] COG2513 PEP phosphonomutase and related enzymes gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1462 VAA049_1463 VAA049_1463 VAA049_1463 1619044 1619748 - bacterial regulatory s%2C gntR family protein [K] COG1802 Transcriptional regulators gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1463 VAA049_1464 VAA049_1464 VAA049_1464 1620382 1621353 + tripartite tricarboxylate transporter receptor family protein [S] COG3181 Uncharacterized protein conserved in bacteria gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1464 VAA049_1465 VAA049_1465 VAA049_1465 1621605 1622102 + tripartite tricarboxylate transporter TctB family protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1465 VAA049_1466 VAA049_1466 VAA049_1466 1622112 1623641 + tripartite tricarboxylate transporter TctA family protein [S] COG3333 Uncharacterized protein conserved in bacteria gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1466 VAA049_1467 VAA049_1467 VAA049_1467 1623792 1624589 - hypothetical protein conserved hypothetical protein gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1467 VAA049_1468 VAA049_1468 VAA049_1468 1624940 1625578 - outer membrane beta-barrel domain protein gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1468 VAA049_1469 VAA049_1469 VAA049_1469 1625988 1626995 - branched-chain amino acid transport system / permease component family protein [G] COG4211 ABC-type glucose/galactose transport system%2C permease component gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1469 VAA049_147 VAA049_147 VAA049_147 154417 154531 + 5S ribosomal RNA rRNA gene145 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_147 VAA049_1470 VAA049_1470 VAA049_1470 1627006 1628514 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1470 VAA049_1471 VAA049_1471 VAA049_1471 1628719 1629693 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1471 VAA049_1472 VAA049_1472 VAA049_1472 1630192 1630674 + dinitrogenase iron-molybdenum cofactor family protein [S] COG1433 Uncharacterized conserved protein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1472 VAA049_1473 VAA049_1473 VAA049_1473 1630671 1630868 + hypothetical protein conserved hypothetical protein~[S] COG2991 Uncharacterized protein conserved in bacteria gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1473 VAA049_1474 VAA049_1474 VAA049_1474 1630950 1634021 - penicillin binding transpeptidase domain protein [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein) gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1474 VAA049_1475 VAA049_1475 VAA049_1475 1634397 1635101 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1475 VAA049_1476 VAA049_1476 VAA049_1476 1635127 1636449 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1476 VAA049_1477 VAA049_1477 ompV ompV 1636662 1637435 + outer membrane protein ompV [M] COG3713 Outer membrane protein V gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1477 VAA049_1478 VAA049_1478 VAA049_1478 1637533 1638453 + hypothetical protein conserved hypothetical protein~[S] COG2990 Uncharacterized protein conserved in bacteria gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1478 VAA049_1479 VAA049_1479 VAA049_1479 1638481 1638957 - response regulator [T] COG0784 FOG: CheY-like receiver gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1479 VAA049_148 VAA049_148 VAA049_148 154556 154632 + tRNA-Asp tRNA gene146 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_148 VAA049_1480 VAA049_1480 VAA049_1480 1638926 1640275 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG0642 Signal transduction histidine kinase gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1480 VAA049_1481 VAA049_1481 VAA049_1481 1640285 1641697 - transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1481 VAA049_1482 VAA049_1482 VAA049_1482 1642082 1643713 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1482 VAA049_1483 VAA049_1483 alr alr 1643825 1645048 + alanine racemase alr: alanine racemase~[M] COG0787 Alanine racemase gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1483 VAA049_1484 VAA049_1484 VAA049_1484 1645169 1646047 + eamA-like transporter family protein [R] COG5006 Predicted permease%2C DMT superfamily gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1484 VAA049_1485 VAA049_1485 VAA049_1485 1646115 1646588 - hypothetical protein conserved hypothetical protein gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1485 VAA049_1486 VAA049_1486 VAA049_1486 1646683 1647258 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1486 VAA049_1487 VAA049_1487 VAA049_1487 1647258 1648799 - TyrR family helix-turn-helix domain protein HTH_TypR: TyrR family helix-turn-helix domain protein~[KE] COG3283 Transcriptional regulator of aromatic amino acids metabolism gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1487 VAA049_1488 VAA049_1488 VAA049_1488 1648913 1649932 - hypothetical protein conserved hypothetical protein~[S] COG3768 Predicted membrane protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1488 VAA049_1489 VAA049_1489 VAA049_1489 1649929 1651302 - hypothetical protein conserved hypothetical protein~[R] COG3106 Predicted ATPase gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1489 VAA049_149 VAA049_149 add add 154875 155879 - adenosine deaminase aden_deam: adenosine deaminase~[F] COG1816 Adenosine deaminase gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_149 VAA049_1490 VAA049_1490 VAA049_1490 1651528 1651713 - putative membrane protein gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1490 VAA049_1491 VAA049_1491 VAA049_1491 1651867 1653384 - hydrolyase%2C tartrate alpha subunit/fumarate%2C Fe-S type domain protein ttdA_fumA_fumB: hydrolyase%2C tartrate alpha subunit/fumarate%2C Fe-S type domain protein~[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I%2C N-terminal domain gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1491 VAA049_1492 VAA049_1492 pabB pabB 1653560 1654936 + aminodeoxychorismate synthase%2C component I pabB: aminodeoxychorismate synthase%2C component I~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1492 VAA049_1493 VAA049_1493 VAA049_1493 1655259 1655873 + NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1493 VAA049_1494 VAA049_1494 VAA049_1494 1656172 1657404 + transmembrane amino acid transporter family protein [E] COG0814 Amino acid permeases gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1494 VAA049_1495 VAA049_1495 VAA049_1495 1657514 1658875 + L-serine ammonia-lyase sda_mono: L-serine ammonia-lyase~[E] COG1760 L-serine deaminase gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1495 VAA049_1496 VAA049_1496 queD queD 1658964 1659326 - queuosine biosynthesis protein QueD queuosine_QueD: queuosine biosynthesis protein QueD~[H] COG0720 6-pyruvoyl-tetrahydropterin synthase gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1496 VAA049_1497 VAA049_1497 VAA049_1497 1659766 1661397 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1497 VAA049_1498 VAA049_1498 asnS asnS 1661544 1662944 + asparagine--tRNA ligase asnS: asparagine--tRNA ligase~[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1498 VAA049_1499 VAA049_1499 thiD thiD 1663010 1663858 - hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase~[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1499 VAA049_15 VAA049_15 VAA049_15 14689 15669 - quinone oxidoreductase%2C YhdH/YhfP family protein oxido_YhdH: quinone oxidoreductase%2C YhdH/YhfP family protein~[CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_15 VAA049_150 VAA049_150 VAA049_150 155971 158502 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_150 VAA049_1500 VAA049_1500 VAA049_1500 1664394 1665845 + HAMP domain protein [KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1500 VAA049_1501 VAA049_1501 VAA049_1501 1666276 1667466 + aminotransferase class I and II family protein [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1501 VAA049_1502 VAA049_1502 VAA049_1502 1667782 1669671 + CBS domain protein [T] COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1502 VAA049_1503 VAA049_1503 VAA049_1503 1669677 1670378 + exonuclease family protein [L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1503 VAA049_1504 VAA049_1504 VAA049_1504 1670555 1672438 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1504 VAA049_1505 VAA049_1505 VAA049_1505 1672843 1674480 + periplasmic glucan biosynthesis%2C MdoG family protein [P] COG3131 Periplasmic glucans biosynthesis protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1505 VAA049_1506 VAA049_1506 VAA049_1506 1674499 1676664 + glycosyl transferase 21 family protein [M] COG2943 Membrane glycosyltransferase gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1506 VAA049_1507 VAA049_1507 VAA049_1507 1676811 1677833 - helix-turn-helix family protein [K] COG1609 Transcriptional regulators gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1507 VAA049_1508 VAA049_1508 VAA049_1508 1677934 1678692 - ydjC-like family protein [S] COG3394 Uncharacterized protein conserved in bacteria gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1508 VAA049_1509 VAA049_1509 VAA049_1509 1678715 1680037 - hypothetical protein family 4 glycosyl hydrolase C-terminal domain protein~[G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases%2C family 4 of glycosyl hydrolases gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1509 VAA049_151 VAA049_151 ntrC ntrC 158561 159961 - nitrogen regulation protein NR ntrC: nitrogen regulation protein NR~[T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_151 VAA049_1510 VAA049_1510 VAA049_1510 1680019 1680354 - PTS system%2C Lactose/Cellobiose specific IIA subunit [G] COG1447 Phosphotransferase system cellobiose-specific component IIA gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1510 VAA049_1511 VAA049_1511 VAA049_1511 1680401 1681732 - PTS system%2C lactose/cellobiose IIC component family protein lacE: PTS system%2C lactose/cellobiose IIC component family protein~[G] COG1455 Phosphotransferase system cellobiose-specific component IIC gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1511 VAA049_1512 VAA049_1512 VAA049_1512 1681821 1682126 - PTS system%2C Lactose/Cellobiose specific IIB subunit [G] COG1440 Phosphotransferase system cellobiose-specific component IIB gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1512 VAA049_1513 VAA049_1513 VAA049_1513 1682381 1683664 + polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1513 VAA049_1514 VAA049_1514 VAA049_1514 1683829 1685433 - transporter%2C betaine/carnitine/choline transporter family protein bcct: transporter%2C betaine/carnitine/choline transporter family protein~[M] COG1292 Choline-glycine betaine transporter gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1514 VAA049_1515 VAA049_1515 VAA049_1515 1685808 1686287 + iclR helix-turn-helix domain protein [K] COG1846 Transcriptional regulators gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1515 VAA049_1516 VAA049_1516 VAA049_1516 1686289 1686927 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1516 VAA049_1517 VAA049_1517 VAA049_1517 1686920 1688275 - histidine kinase family protein [T] COG4564 Signal transduction histidine kinase gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1517 VAA049_1518 VAA049_1518 VAA049_1518 1688383 1689666 - TRAP transporter%2C DctM subunit dctM: TRAP transporter%2C DctM subunit~[Q] COG4664 TRAP-type mannitol/chloroaromatic compound transport system%2C large permease component gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1518 VAA049_1519 VAA049_1519 VAA049_1519 1689676 1690209 - tripartite ATP-independent periplasmic transporter%2C DctQ component family protein [Q] COG4665 TRAP-type mannitol/chloroaromatic compound transport system%2C small permease component gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1519 VAA049_152 VAA049_152 VAA049_152 159971 161029 - sensory box protein [T] COG3852 Signal transduction histidine kinase%2C nitrogen specific gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_152 VAA049_1520 VAA049_1520 VAA049_1520 1690311 1691405 - bacterial extracellular solute-binding%2C 7 family protein [Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system%2C periplasmic component gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1520 VAA049_1521 VAA049_1521 VAA049_1521 1691791 1692189 - hypothetical protein conserved hypothetical protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1521 VAA049_1522 VAA049_1522 VAA049_1522 1693030 1693686 - beta-lactamase superfamily domain protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1522 VAA049_1523 VAA049_1523 VAA049_1523 1692362 1693036 + hypothetical protein conserved hypothetical protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1523 VAA049_1524 VAA049_1524 VAA049_1524 1693750 1694298 - Tat (twin-arginine translocation) pathway signal sequence domain protein TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein~[S] COG3108 Uncharacterized protein conserved in bacteria gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1524 VAA049_1525 VAA049_1525 VAA049_1525 1694444 1696015 - L%2CD-transpeptidase catalytic domain protein [S] COG2989 Uncharacterized protein conserved in bacteria gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1525 VAA049_1526 VAA049_1526 VAA049_1526 1696266 1697348 - hypothetical protein conserved hypothetical protein~[S] COG3490 Uncharacterized protein conserved in bacteria gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1526 VAA049_1527 VAA049_1527 VAA049_1527 1697329 1698336 - imelysin family protein [R] COG3489 Predicted periplasmic lipoprotein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1527 VAA049_1528 VAA049_1528 VAA049_1528 1698346 1699731 - cytochrome c family protein [C] COG3488 Predicted thiol oxidoreductase gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1528 VAA049_1529 VAA049_1529 VAA049_1529 1699938 1701200 - imelysin family protein [P] COG3487 Uncharacterized iron-regulated protein gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1529 VAA049_153 VAA049_153 VAA049_153 161168 161758 - hypothetical protein conserved hypothetical protein gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_153 VAA049_1530 VAA049_1530 VAA049_1530 1701380 1701976 - GTP cyclohydrolase II family protein [H] COG0807 GTP cyclohydrolase II gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1530 VAA049_1531 VAA049_1531 VAA049_1531 1702201 1702377 - putative 3-demethylubiquinone-9 3-methyltransferase gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1531 VAA049_1532 VAA049_1532 VAA049_1532 1702565 1703779 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1532 VAA049_1533 VAA049_1533 VAA049_1533 1704030 1704929 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1533 VAA049_1534 VAA049_1534 VAA049_1534 1704956 1705939 - rhodanese-like domain protein [R] COG1054 Predicted sulfurtransferase gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1534 VAA049_1535 VAA049_1535 gyrA gyrA 1706167 1708851 - DNA gyrase%2C A subunit gyrA: DNA gyrase%2C A subunit~[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1535 VAA049_1536 VAA049_1536 ubiG ubiG 1709203 1709940 + 3-demethylubiquinone-9 3-O-methyltransferase ubiG: 3-demethylubiquinone-9 3-O-methyltransferase~[H] COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1%2C4-benzoquinol methylase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1536 VAA049_1537 VAA049_1537 VAA049_1537 1710389 1712674 + ribonucleoside-diphosphate reductase%2C alpha subunit nrdE_NrdA: ribonucleoside-diphosphate reductase%2C alpha subunit~[F] COG0209 Ribonucleotide reductase%2C alpha subunit gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1537 VAA049_1538 VAA049_1538 VAA049_1538 1712770 1713903 + ribonucleotide reductase%2C small chain family protein [F] COG0208 Ribonucleotide reductase%2C beta subunit gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1538 VAA049_1539 VAA049_1539 VAA049_1539 1713903 1714181 + 2Fe-2S iron-sulfur cluster binding domain protein [C] COG0633 Ferredoxin gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1539 VAA049_154 VAA049_154 glnA glnA 161936 163345 - glutamine synthetase%2C type I glnA: glutamine synthetase%2C type I~[E] COG0174 Glutamine synthetase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_154 VAA049_1540 VAA049_1540 VAA049_1540 1714524 1714664 - hypothetical protein conserved hypothetical protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1540 VAA049_1541 VAA049_1541 VAA049_1541 1714914 1716152 - molybdenum cofactor synthesis domain protein molyb_syn: molybdenum cofactor synthesis domain protein~[R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1541 VAA049_1542 VAA049_1542 VAA049_1542 1716325 1717224 + hypothetical protein conserved hypothetical protein gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1542 VAA049_1543 VAA049_1543 VAA049_1543 1717490 1718002 + ACT domain protein [E] COG2716 Glycine cleavage system regulatory protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1543 VAA049_1544 VAA049_1544 VAA049_1544 1718233 1719843 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1544 VAA049_1545 VAA049_1545 VAA049_1545 1719936 1720286 + hypothetical protein conserved hypothetical protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1545 VAA049_1546 VAA049_1546 VAA049_1546 1720346 1721386 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1546 VAA049_1547 VAA049_1547 VAA049_1547 1721457 1721609 - hypothetical protein gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1547 VAA049_1548 VAA049_1548 VAA049_1548 1721745 1722383 - HD domain protein [R] COG1418 Predicted HD superfamily hydrolase gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1548 VAA049_1549 VAA049_1549 VAA049_1549 1722551 1722967 - hypothetical protein conserved hypothetical protein~[S] COG3755 Uncharacterized protein conserved in bacteria gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1549 VAA049_155 VAA049_155 VAA049_155 163490 163813 + hypothetical protein conserved hypothetical protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_155 VAA049_1550 VAA049_1550 VAA049_1550 1723106 1723390 - antibiotic biosynthesis monooxygenase family protein [S] COG1359 Uncharacterized conserved protein gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1550 VAA049_1551 VAA049_1551 VAA049_1551 1723621 1723782 - hypothetical protein conserved hypothetical protein gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1551 VAA049_1552 VAA049_1552 VAA049_1552 1724997 1725278 - putative nucleotide-binding containing TIR-like domain protein [K] COG4271 Predicted nucleotide-binding protein containing TIR -like domain gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1552 VAA049_1553 VAA049_1553 VAA049_1553 1725275 1726195 - transposase DDE domain protein gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1553 VAA049_1554 VAA049_1554 VAA049_1554 1726630 1726959 - putative nucleotide-binding domain protein gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1554 VAA049_1555 VAA049_1555 VAA049_1555 1727122 1727547 - hypothetical protein conserved hypothetical protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1555 VAA049_1556 VAA049_1556 VAA049_1556 1727816 1728181 - hypothetical protein conserved hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1556 VAA049_1557 VAA049_1557 VAA049_1557 1728397 1728642 + post-segregation antitoxin CcdA family protein [R] COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1557 VAA049_1558 VAA049_1558 ccdB ccdB 1728642 1728959 + ccdB gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1558 VAA049_1559 VAA049_1559 VAA049_1559 1729077 1729508 - hypothetical protein conserved hypothetical protein gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1559 VAA049_156 VAA049_156 typA typA 163832 165661 + GTP-binding protein TypA/BipA typA_BipA: GTP-binding protein TypA/BipA~[T] COG1217 Predicted membrane GTPase involved in stress response gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_156 VAA049_1560 VAA049_1560 VAA049_1560 1729653 1730405 - hypothetical protein conserved hypothetical protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1560 VAA049_1561 VAA049_1561 VAA049_1561 1730554 1730949 - hypothetical protein conserved hypothetical protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1561 VAA049_1562 VAA049_1562 VAA049_1562 1731119 1731544 - hypothetical protein conserved hypothetical protein gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1562 VAA049_1563 VAA049_1563 VAA049_1563 1731795 1732415 - hypothetical protein conserved hypothetical protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1563 VAA049_1564 VAA049_1564 VAA049_1564 1732560 1733192 - hypothetical protein gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1564 VAA049_1565 VAA049_1565 VAA049_1565 1733338 1734159 - hypothetical protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1565 VAA049_1566 VAA049_1566 VAA049_1566 1734769 1735449 - hypothetical protein conserved hypothetical protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1566 VAA049_1567 VAA049_1567 VAA049_1567 1735694 1736653 + integrase core domain protein [L] COG2826 Transposase and inactivated derivatives%2C IS30 family gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1567 VAA049_1568 VAA049_1568 VAA049_1568 1736684 1737238 - putative lipoprotein gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1568 VAA049_1569 VAA049_1569 VAA049_1569 1737914 1738309 - hypothetical protein conserved hypothetical protein gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1569 VAA049_157 VAA049_157 VAA049_157 165768 166298 + AAA domain protein [R] COG3911 Predicted ATPase gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_157 VAA049_1570 VAA049_1570 VAA049_1570 1739272 1739667 - hypothetical protein conserved hypothetical protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1570 VAA049_1571 VAA049_1571 VAA049_1571 1739835 1740458 - hypothetical protein conserved hypothetical protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1571 VAA049_1572 VAA049_1572 VAA049_1572 1740624 1740887 - addiction module toxin%2C Txe/YoeB family toxin_Txe_YoeB: addiction module toxin%2C Txe/YoeB family~[S] COG4115 Uncharacterized protein conserved in bacteria gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1572 VAA049_1573 VAA049_1573 VAA049_1573 1740880 1741134 - prevent-host-death family protein phd_fam: prevent-host-death family protein~[D] COG2161 Antitoxin of toxin-antitoxin stability system gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1573 VAA049_1574 VAA049_1574 VAA049_1574 1741990 1742211 - hypothetical protein conserved hypothetical protein~[R] COG3313 Predicted Fe-S protein gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1574 VAA049_1575 VAA049_1575 VAA049_1575 1742390 1742746 - hypothetical protein gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1575 VAA049_1576 VAA049_1576 VAA049_1576 1742886 1743311 - acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1576 VAA049_1577 VAA049_1577 VAA049_1577 1743444 1743902 - hypothetical protein conserved hypothetical protein gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1577 VAA049_1578 VAA049_1578 VAA049_1578 1744057 1744533 - acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1578 VAA049_1579 VAA049_1579 VAA049_1579 1744669 1745139 - hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1579 VAA049_158 VAA049_158 yihY yihY 166346 167254 + YihY family inner membrane domain protein yihY_not_rbn: YihY family inner membrane domain protein~[S] COG1295 Predicted membrane protein gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_158 VAA049_1580 VAA049_1580 VAA049_1580 1745289 1745525 - hypothetical protein conserved hypothetical protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1580 VAA049_1581 VAA049_1581 VAA049_1581 1745765 1746601 - putative aTP-dependent RNA helicase HrpA gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1581 VAA049_1582 VAA049_1582 VAA049_1582 1746737 1747219 - hypothetical protein conserved hypothetical protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1582 VAA049_1583 VAA049_1583 VAA049_1583 1747372 1747848 - acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1583 VAA049_1584 VAA049_1584 VAA049_1584 1747999 1748388 - glyoxalase-like domain protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1584 VAA049_1585 VAA049_1585 VAA049_1585 1748646 1748894 - hypothetical protein gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1585 VAA049_1586 VAA049_1586 VAA049_1586 1749976 1750464 - acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1586 VAA049_1587 VAA049_1587 VAA049_1587 1750596 1751132 - hypothetical protein conserved hypothetical protein~[S] COG3575 Uncharacterized protein conserved in bacteria gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1587 VAA049_1588 VAA049_1588 VAA049_1588 1751267 1751722 - acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1588 VAA049_1589 VAA049_1589 VAA049_1589 1751852 1752247 - hypothetical protein conserved hypothetical protein gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1589 VAA049_159 VAA049_159 dtd dtd 167226 167660 + D-tyrosyl-tRNA(Tyr) deacylase [J] COG1490 D-Tyr-tRNAtyr deacylase gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_159 VAA049_1590 VAA049_1590 VAA049_1590 1752411 1752875 - ASCH domain protein [S] COG4405 Uncharacterized protein conserved in bacteria gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1590 VAA049_1591 VAA049_1591 VAA049_1591 1753477 1754526 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG0642 Signal transduction histidine kinase gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1591 VAA049_1592 VAA049_1592 VAA049_1592 1754519 1755250 - hypothetical protein conserved hypothetical protein gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1592 VAA049_1593 VAA049_1593 VAA049_1593 1756520 1757683 - hypothetical protein conserved hypothetical protein gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1593 VAA049_1594 VAA049_1594 intIA intIA 1757939 1758901 + site-specific recombinase IntI4 [L] COG0582 Integrase gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1594 VAA049_1595 VAA049_1595 rplT rplT 1758983 1759336 - ribosomal protein L20 rplT_bact: ribosomal protein L20~[J] COG0292 Ribosomal protein L20 gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1595 VAA049_1596 VAA049_1596 rpmI rpmI 1759378 1759572 - ribosomal protein L35 rpmI_bact: ribosomal protein L35~[J] COG0291 Ribosomal protein L35 gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1596 VAA049_1597 VAA049_1597 infC infC 1759676 1760065 - translation initiation factor IF-3 infC: translation initiation factor IF-3~[J] COG0290 Translation initiation factor 3 (IF-3) gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1597 VAA049_1598 VAA049_1598 thrS thrS 1760231 1762159 - threonine--tRNA ligase thrS: threonine--tRNA ligase~[J] COG0441 Threonyl-tRNA synthetase gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1598 VAA049_1599 VAA049_1599 VAA049_1599 1762428 1762778 - hypothetical protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1599 VAA049_16 VAA049_16 ilvA ilvA 15917 17449 - threonine ammonia-lyase%2C biosynthetic ilvA_2Cterm: threonine ammonia-lyase%2C biosynthetic~[E] COG1171 Threonine dehydratase gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_16 VAA049_160 VAA049_160 VAA049_160 167733 168659 + putative thioesterase domain protein yiiD_Cterm: putative thioesterase domain protein~[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_160 VAA049_1600 VAA049_1600 VAA049_1600 1762780 1763451 - hypothetical protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1600 VAA049_1601 VAA049_1601 VAA049_1601 1763451 1763981 - PAAR motif family protein [S] COG4104 Uncharacterized conserved protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1601 VAA049_1602 VAA049_1602 VAA049_1602 1764502 1765659 - hypothetical protein conserved hypothetical protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1602 VAA049_1603 VAA049_1603 VAA049_1603 1766032 1767036 - phage late control protein [R] COG3500 Phage protein D gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1603 VAA049_1604 VAA049_1604 VAA049_1604 1767027 1767233 - phage Tail Protein X family protein [R] COG5004 P2-like prophage tail protein X gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1604 VAA049_1605 VAA049_1605 VAA049_1605 1767217 1767612 - phage P2 GpU family protein [R] COG3499 Phage protein U gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1605 VAA049_1606 VAA049_1606 VAA049_1606 1767612 1769393 - hypothetical protein conserved hypothetical protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1606 VAA049_1607 VAA049_1607 VAA049_1607 1769497 1769799 - mu-like prophage FluMu gp41 family protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1607 VAA049_1608 VAA049_1608 VAA049_1608 1769851 1770366 - phage tail tube FII family protein [R] COG3498 Phage tail tube protein FII gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1608 VAA049_1609 VAA049_1609 VAA049_1609 1770366 1771460 - phage tail sheath family protein [R] COG3497 Phage tail sheath protein FI gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1609 VAA049_161 VAA049_161 VAA049_161 168701 170587 - asmA family protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_161 VAA049_1610 VAA049_1610 VAA049_1610 1771549 1771896 - putative tail fiber assembly domain protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1610 VAA049_1611 VAA049_1611 VAA049_1611 1771886 1772935 - tail Collar domain protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1611 VAA049_1612 VAA049_1612 VAA049_1612 1772937 1773494 - phage tail protein I tail_P2_I: phage tail protein I~[R] COG4385 Bacteriophage P2-related tail formation protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1612 VAA049_1613 VAA049_1613 VAA049_1613 1773494 1774372 - baseplate J-like family protein [R] COG3948 Phage-related baseplate assembly protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1613 VAA049_1614 VAA049_1614 VAA049_1614 1774369 1774710 - lysozyme family protein [R] COG3628 Phage baseplate assembly protein W gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1614 VAA049_1615 VAA049_1615 VAA049_1615 1774712 1775359 - phage baseplate assembly V family protein phage_P2_V: phage baseplate assembly V family protein~[R] COG4540 Phage P2 baseplate assembly protein gpV gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1615 VAA049_1616 VAA049_1616 VAA049_1616 1775356 1775880 - hypothetical protein conserved hypothetical protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1616 VAA049_1617 VAA049_1617 VAA049_1617 1775873 1776478 - prophage minor tail Z family protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1617 VAA049_1618 VAA049_1618 VAA049_1618 1776441 1776791 - phage Head-Tail Attachment family protein gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1618 VAA049_1619 VAA049_1619 VAA049_1619 1776784 1777020 - hypothetical protein conserved hypothetical protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1619 VAA049_162 VAA049_162 pckA pckA 170774 172402 - phosphoenolpyruvate carboxykinase pckA: phosphoenolpyruvate carboxykinase~[C] COG1866 Phosphoenolpyruvate carboxykinase (ATP) gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_162 VAA049_1620 VAA049_1620 VAA049_1620 1777073 1779052 - phage major capsid protein%2C HK97 family major_cap_HK97: phage major capsid protein%2C HK97 family gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1620 VAA049_1621 VAA049_1621 VAA049_1621 1779009 1780577 - phage portal protein%2C lambda family portal_lambda: phage portal protein%2C lambda family~[R] COG5511 Bacteriophage capsid protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1621 VAA049_1622 VAA049_1622 VAA049_1622 1780577 1781104 - hypothetical protein gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1622 VAA049_1623 VAA049_1623 VAA049_1623 1781098 1782927 - phage terminase large subunit family protein [R] COG5525 Bacteriophage tail assembly protein gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1623 VAA049_1624 VAA049_1624 VAA049_1624 1783061 1783630 - phage DNA packaging Nu1 family protein [L] COG4220 Phage DNA packaging protein%2C Nu1 subunit of terminase gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1624 VAA049_1625 VAA049_1625 VAA049_1625 1784075 1785304 - phage integrase family protein [L] COG0582 Integrase gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1625 VAA049_1626 VAA049_1626 VAA049_1626 1785763 1786179 - hypothetical protein conserved hypothetical protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1626 VAA049_1627 VAA049_1627 VAA049_1627 1786130 1786657 - phage lysozyme family protein [R] COG3772 Phage-related lysozyme (muraminidase) gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1627 VAA049_1628 VAA049_1628 VAA049_1628 1786638 1786850 - hypothetical protein conserved hypothetical protein gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1628 VAA049_1629 VAA049_1629 VAA049_1629 1787147 1787770 + hypothetical protein conserved hypothetical protein gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1629 VAA049_163 VAA049_163 VAA049_163 172739 173614 - hsp33 family protein [O] COG1281 Disulfide bond chaperones of the HSP33 family gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_163 VAA049_1630 VAA049_1630 VAA049_1630 1787764 1788786 + hypothetical protein conserved hypothetical protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1630 VAA049_1631 VAA049_1631 VAA049_1631 1788857 1789441 - phage regulatory%2C Rha family protein phage_pRha: phage regulatory%2C Rha family protein~[S] COG3646 Uncharacterized phage-encoded protein gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1631 VAA049_1632 VAA049_1632 VAA049_1632 1789718 1790302 - hypothetical protein conserved hypothetical protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1632 VAA049_1633 VAA049_1633 VAA049_1633 1790304 1790936 - DNA N-6-adenine-methyltransferase family protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1633 VAA049_1634 VAA049_1634 VAA049_1634 1790936 1791355 - hypothetical protein conserved hypothetical protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1634 VAA049_1635 VAA049_1635 VAA049_1635 1791324 1792307 - hypothetical protein conserved hypothetical protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1635 VAA049_1636 VAA049_1636 VAA049_1636 1792304 1792438 - hypothetical protein conserved hypothetical protein gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1636 VAA049_1637 VAA049_1637 VAA049_1637 1792488 1793033 - hypothetical protein conserved hypothetical protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1637 VAA049_1638 VAA049_1638 VAA049_1638 1793103 1793297 - DNA-binding transcriptional regulator Cro family protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1638 VAA049_1639 VAA049_1639 VAA049_1639 1793372 1794088 + helix-turn-helix family protein [K] COG2932 Predicted transcriptional regulator gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1639 VAA049_164 VAA049_164 VAA049_164 173648 174025 - S4 domain protein [J] COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_164 VAA049_1640 VAA049_1640 VAA049_1640 1794236 1794505 + hypothetical protein conserved hypothetical protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1640 VAA049_1641 VAA049_1641 VAA049_1641 1794532 1794837 + hypothetical protein conserved hypothetical protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1641 VAA049_1642 VAA049_1642 VAA049_1642 1794992 1795300 + hypothetical protein conserved hypothetical protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1642 VAA049_1643 VAA049_1643 VAA049_1643 1796038 1797096 - beta family protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1643 VAA049_1644 VAA049_1644 VAA049_1644 1795408 1796094 + putative protein cII gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1644 VAA049_1645 VAA049_1645 VAA049_1645 1797093 1797605 - hypothetical protein conserved hypothetical protein~[E] COG2856 Predicted Zn peptidase gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1645 VAA049_1646 VAA049_1646 VAA049_1646 1797648 1798325 - hypothetical protein gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1646 VAA049_1647 VAA049_1647 VAA049_1647 1798388 1799578 - phage integrase family protein [L] COG0582 Integrase gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1647 VAA049_1648 VAA049_1648 gcvT gcvT 1800050 1801180 - glycine cleavage system T protein gcvT: glycine cleavage system T protein~[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase) gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1648 VAA049_1649 VAA049_1649 VAA049_1649 1801424 1802047 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1649 VAA049_165 VAA049_165 gspC gspC 174255 175172 + type II secretion system protein C typeII_sec_gspC: type II secretion system protein C~[U] COG3031 Type II secretory pathway%2C component PulC gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_165 VAA049_1650 VAA049_1650 VAA049_1650 1802435 1803742 + aminotransferase class I and II family protein [E] COG0112 Glycine/serine hydroxymethyltransferase gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1650 VAA049_1651 VAA049_1651 gcvH gcvH 1803779 1804159 + glycine cleavage system H protein gcvH: glycine cleavage system H protein~[E] COG0509 Glycine cleavage system H protein (lipoate-binding) gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1651 VAA049_1652 VAA049_1652 gcvP gcvP 1804303 1807167 + glycine dehydrogenase gcvP: glycine dehydrogenase~[E] COG1003 Glycine cleavage system protein P (pyridoxal-binding)%2C C-terminal domain gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1652 VAA049_1653 VAA049_1653 VAA049_1653 1807448 1808167 - eukaryotic-type carbonic anhydrase family protein [P] COG3338 Carbonic anhydrase gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1653 VAA049_1654 VAA049_1654 VAA049_1654 1808384 1808818 + hypothetical protein conserved hypothetical protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1654 VAA049_1655 VAA049_1655 VAA049_1655 1808913 1809260 - cro/C1-type HTH DNA-binding domain protein gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1655 VAA049_1656 VAA049_1656 VAA049_1656 1809438 1810565 - D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1656 VAA049_1657 VAA049_1657 VAA049_1657 1810772 1812445 - hypothetical protein conserved hypothetical protein~[E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1657 VAA049_1658 VAA049_1658 VAA049_1658 1812461 1814371 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1658 VAA049_1659 VAA049_1659 VAA049_1659 1814896 1815276 - hypothetical protein conserved hypothetical protein gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1659 VAA049_166 VAA049_166 gspD gspD 175218 177242 + type II secretion system protein D type_II_gspD: type II secretion system protein D~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_166 VAA049_1660 VAA049_1660 VAA049_1660 1815460 1816638 + methyltransferase small domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1660 VAA049_1661 VAA049_1661 VAA049_1661 1816649 1817191 + acetyltransferase family protein [R] COG3153 Predicted acetyltransferase gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1661 VAA049_1662 VAA049_1662 VAA049_1662 1817297 1817707 + hypothetical protein conserved hypothetical protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1662 VAA049_1663 VAA049_1663 VAA049_1663 1817817 1818341 + hypothetical protein conserved hypothetical protein~[P] COG4454 Uncharacterized copper-binding protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1663 VAA049_1664 VAA049_1664 VAA049_1664 1818536 1819048 + cupin domain protein [S] COG3837 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1664 VAA049_1665 VAA049_1665 VAA049_1665 1819151 1820605 + his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1665 VAA049_1666 VAA049_1666 VAA049_1666 1820602 1821252 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1666 VAA049_1667 VAA049_1667 VAA049_1667 1821249 1822079 + hypothetical protein conserved hypothetical protein gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1667 VAA049_1668 VAA049_1668 VAA049_1668 1822168 1824399 + glycosyl hydrolase gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1668 VAA049_1669 VAA049_1669 VAA049_1669 1824518 1825169 - hexapeptide repeat of succinyl-transferase family protein%3Bputative hexapeptide repeat-containing transferase pseudogene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1669 VAA049_167 VAA049_167 gspE gspE 177239 178750 + type II secretion system protein E type_II_gspE: type II secretion system protein E~[NU] COG2804 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_167 VAA049_1671 VAA049_1671 VAA049_1671 1825550 1826950 + alpha amylase%2C catalytic domain protein [G] COG0366 Glycosidases gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1671 VAA049_1672 VAA049_1672 VAA049_1672 1827123 1827656 + prokaryotic cytochrome b561 family protein [C] COG3038 Cytochrome B561 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1672 VAA049_1673 VAA049_1673 VAA049_1673 1827756 1828823 - beta-lactamase superfamily domain protein [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1673 VAA049_1674 VAA049_1674 ulaR ulaR 1828950 1829705 - HTH-type transcriptional regulator ulaR [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1674 VAA049_1675 VAA049_1675 VAA049_1675 1830071 1831831 + PTS system%2C Lactose/Cellobiose specific IIB subunit [S] COG3037 Uncharacterized protein conserved in bacteria gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1675 VAA049_1676 VAA049_1676 VAA049_1676 1831929 1832435 + phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 family protein [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1676 VAA049_1677 VAA049_1677 VAA049_1677 1832444 1833136 + hypothetical protein class II Aldolase and Adducin N-terminal domain protein~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1677 VAA049_1678 VAA049_1678 VAA049_1678 1833142 1833963 + HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1678 VAA049_1679 VAA049_1679 VAA049_1679 1833969 1834616 + hexulose-6-phosphate synthase SgbH%2C putative [G] COG0269 3-hexulose-6-phosphate synthase and related proteins gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1679 VAA049_168 VAA049_168 gspF gspF 178750 179970 + type II secretion system protein F gspF: type II secretion system protein F~[NU] COG1459 Type II secretory pathway%2C component PulF gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_168 VAA049_1680 VAA049_1680 VAA049_1680 1834630 1835514 + xylose isomerase-like TIM barrel family protein [G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1680 VAA049_1681 VAA049_1681 VAA049_1681 1835670 1836101 + hypothetical protein conserved hypothetical protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1681 VAA049_1682 VAA049_1682 VAA049_1682 1836104 1836778 - response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1682 VAA049_1683 VAA049_1683 VAA049_1683 1836759 1838369 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1683 VAA049_1684 VAA049_1684 VAA049_1684 1838641 1839210 + hypothetical protein conserved hypothetical protein~[S] COG4337 Uncharacterized protein conserved in bacteria gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1684 VAA049_1685 VAA049_1685 VAA049_1685 1839328 1839624 - hypothetical protein conserved hypothetical protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1685 VAA049_1686 VAA049_1686 ackA ackA 1842403 1843596 - acetate kinase ackA: acetate kinase~[C] COG0282 Acetate kinase gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1686 VAA049_1687 VAA049_1687 VAA049_1687 1843866 1844186 - hypothetical protein conserved hypothetical protein~[S] COG3553 Uncharacterized protein conserved in bacteria gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1687 VAA049_1688 VAA049_1688 VAA049_1688 1844244 1846223 - TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1688 VAA049_1689 VAA049_1689 VAA049_1689 1846310 1847326 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1689 VAA049_169 VAA049_169 gspG gspG 180011 180451 + type II secretion system protein G typeII_sec_gspG: type II secretion system protein G~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_169 VAA049_1690 VAA049_1690 VAA049_1690 1847373 1848137 - ABC transporter family protein [P] COG4604 ABC-type enterochelin transport system%2C ATPase component gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1690 VAA049_1691 VAA049_1691 VAA049_1691 1848140 1849090 - fecCD transport family protein [P] COG4605 ABC-type enterochelin transport system%2C permease component gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1691 VAA049_1692 VAA049_1692 VAA049_1692 1849080 1850018 - fecCD transport family protein [P] COG4606 ABC-type enterochelin transport system%2C permease component gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1692 VAA049_1693 VAA049_1693 VAA049_1693 1850071 1850982 - periplasmic binding family protein [P] COG4607 ABC-type enterochelin transport system%2C periplasmic component gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1693 VAA049_1694 VAA049_1694 VAA049_1694 1851388 1852146 - glutamine amidotransferases class-II family protein [R] COG0121 Predicted glutamine amidotransferase gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1694 VAA049_1695 VAA049_1695 VAA049_1695 1852235 1852435 - hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1695 VAA049_1696 VAA049_1696 VAA049_1696 1852638 1853354 + transposase DDE domain protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1696 VAA049_1697 VAA049_1697 VAA049_1697 1853802 1854074 + hypothetical protein conserved hypothetical protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1697 VAA049_1698 VAA049_1698 VAA049_1698 1854159 1856915 + M6 family metalloprotease domain protein M6dom_TIGR03296: M6 family metalloprotease domain protein~[S] COG4412 Uncharacterized protein conserved in bacteria gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1698 VAA049_1699 VAA049_1699 VAA049_1699 1856991 1857845 - proteobacterial lipase chaperone family protein [O] COG5380 Lipase chaperone gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1699 VAA049_17 VAA049_17 ilvD ilvD 17453 19294 - dihydroxy-acid dehydratase ilvD: dihydroxy-acid dehydratase~[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_17 VAA049_170 VAA049_170 epsH epsH 180485 181063 + general secretion pathway protein H [NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_170 VAA049_1700 VAA049_1700 VAA049_1700 1857855 1858793 - alpha/beta hydrolase family protein [R] COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1700 VAA049_1701 VAA049_1701 VAA049_1701 1859140 1860786 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1701 VAA049_1702 VAA049_1702 hlyA hlyA 1861087 1863312 - hemolysin gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1702 VAA049_1703 VAA049_1703 VAA049_1703 1864285 1865541 + thermolabile hemolysin [IR] COG3240 Phospholipase/lecithinase/hemolysin gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1703 VAA049_1704 VAA049_1704 VAA049_1704 1866732 1866998 - putative membrane protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1704 VAA049_1705 VAA049_1705 VAA049_1705 1865662 1866741 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1705 VAA049_1706 VAA049_1706 VAA049_1706 1867251 1868456 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1706 VAA049_1707 VAA049_1707 VAA049_1707 1868860 1870440 + na+/H+ antiporter family protein [C] COG1757 Na+/H+ antiporter gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1707 VAA049_1708 VAA049_1708 VAA049_1708 1870518 1871492 - putative aBC-type sugar transport system ATPase component gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1708 VAA049_1709 VAA049_1709 VAA049_1709 1871742 1873688 + his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1709 VAA049_171 VAA049_171 gspI gspI 181053 181406 + type II secretion system protein I gspI: type II secretion system protein I~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_171 VAA049_1710 VAA049_1710 VAA049_1710 1873746 1875287 - hypothetical protein conserved hypothetical protein~[KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1710 VAA049_1711 VAA049_1711 VAA049_1711 1875483 1876010 - cytidylyltransferase family protein [H] COG1057 Nicotinic acid mononucleotide adenylyltransferase gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1711 VAA049_1712 VAA049_1712 nadE nadE 1876113 1876943 + NH(3)-dependent NAD(+) synthetase [H] COG0171 NAD synthase gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1712 VAA049_1713 VAA049_1713 VAA049_1713 1877194 1878522 + transporter%2C anaerobic C4-dicarboxylate uptake family protein dcu: transporter%2C anaerobic C4-dicarboxylate uptake family protein~[R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1713 VAA049_1714 VAA049_1714 VAA049_1714 1878712 1880106 + hypothetical protein conserved hypothetical protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1714 VAA049_1715 VAA049_1715 VAA049_1715 1880110 1880214 - hypothetical protein conserved hypothetical protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1715 VAA049_1716 VAA049_1716 VAA049_1716 1880292 1880462 - hypothetical protein gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1716 VAA049_1717 VAA049_1717 VAA049_1717 1880662 1881378 - transposase DDE domain protein gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1717 VAA049_1718 VAA049_1718 VAA049_1718 1881581 1881715 + hypothetical protein gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1718 VAA049_1719 VAA049_1719 VAA049_1719 1882622 1883371 + scaI restriction endonuclease family protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1719 VAA049_172 VAA049_172 gspJ gspJ 181429 182058 + type II secretion system protein J gspJ: type II secretion system protein J~[U] COG4795 Type II secretory pathway%2C component PulJ gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_172 VAA049_1720 VAA049_1720 VAA049_1720 1883373 1884233 - DNA methylase family protein [L] COG0863 DNA modification methylase gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1720 VAA049_1721 VAA049_1721 guaC guaC 1884758 1885801 - guanosine monophosphate reductase GMP_reduct_1: guanosine monophosphate reductase~[F] COG0516 IMP dehydrogenase/GMP reductase gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1721 VAA049_1722 VAA049_1722 VAA049_1722 1886447 1886995 + outer membrane beta-barrel domain protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1722 VAA049_1723 VAA049_1723 VAA049_1723 1887061 1887903 + ion transport family protein [P] COG1226 Kef-type K+ transport systems%2C predicted NAD-binding component gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1723 VAA049_1724 VAA049_1724 VAA049_1724 1887905 1889188 - na+/H+ antiporter family protein [C] COG1757 Na+/H+ antiporter gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1724 VAA049_1725 VAA049_1725 VAA049_1725 1890415 1891887 - hydroxyethylthiazole kinase family protein [G] COG0063 Predicted sugar kinase gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1725 VAA049_1726 VAA049_1726 VAA049_1726 1889431 1890426 + D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1726 VAA049_1727 VAA049_1727 VAA049_1727 1891937 1892383 - PAS fold family protein [T] COG2202 FOG: PAS/PAC domain gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1727 VAA049_1728 VAA049_1728 VAA049_1728 1892383 1893387 - response regulator [NT] COG1776 Chemotaxis protein CheC%2C inhibitor of MCP methylation gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1728 VAA049_1729 VAA049_1729 VAA049_1729 1893474 1893713 - putative membrane protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1729 VAA049_173 VAA049_173 VAA049_173 182048 183058 + type II secretion system (T2SS)%2C K family protein [U] COG3156 Type II secretory pathway%2C component PulK gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_173 VAA049_1730 VAA049_1730 VAA049_1730 1893989 1894366 - putative membrane protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1730 VAA049_1731 VAA049_1731 VAA049_1731 1894754 1894981 - hypothetical protein domain of unknown function family protein~[S] COG3036 Uncharacterized protein conserved in bacteria gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1731 VAA049_1732 VAA049_1732 VAA049_1732 1895340 1895549 + 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1732 VAA049_1733 VAA049_1733 VAA049_1733 1895694 1896878 - globin family protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1733 VAA049_1734 VAA049_1734 VAA049_1734 1898665 1899540 - mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1734 VAA049_1735 VAA049_1735 luxO luxO 1897070 1898668 + regulatory protein luxO [KT] COG3604 Transcriptional regulator containing GAF%2C AAA-type ATPase%2C and DNA binding domains gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1735 VAA049_1736 VAA049_1736 pepT pepT 1899712 1900944 - peptidase T peptidase-T: peptidase T~[E] COG2195 Di- and tripeptidases gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1736 VAA049_1737 VAA049_1737 VAA049_1737 1901179 1902387 - nucleoside transporter%2C NupC family protein nupC: nucleoside transporter%2C NupC family protein~[F] COG1972 Nucleoside permease gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1737 VAA049_1738 VAA049_1738 VAA049_1738 1903034 1903687 + DSBA-like thioredoxin domain protein [Q] COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1738 VAA049_1739 VAA049_1739 VAA049_1739 1903960 1904160 - hypothetical protein conserved hypothetical protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1739 VAA049_174 VAA049_174 gspL gspL 183027 184238 + type II secretion system protein L typeII_sec_gspL: type II secretion system protein L~[U] COG3297 Type II secretory pathway%2C component PulL gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_174 VAA049_1740 VAA049_1740 VAA049_1740 1904220 1906136 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1740 VAA049_1741 VAA049_1741 VAA049_1741 1906438 1907394 + AAA domain family protein [R] COG0714 MoxR-like ATPases gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1741 VAA049_1742 VAA049_1742 VAA049_1742 1907398 1908330 + hypothetical protein conserved hypothetical protein~[R] COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1742 VAA049_1743 VAA049_1743 VAA049_1743 1908327 1908815 + hypothetical protein conserved hypothetical protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1743 VAA049_1744 VAA049_1744 VAA049_1744 1908832 1909758 + von Willebrand factor type A domain protein [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1744 VAA049_1745 VAA049_1745 VAA049_1745 1909760 1911649 + tetratricopeptide repeat family protein [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1745 VAA049_1746 VAA049_1746 VAA049_1746 1911643 1913295 + oxygen tolerance family protein gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1746 VAA049_1747 VAA049_1747 VAA049_1747 1913456 1914172 + hypothetical protein conserved hypothetical protein~[S] COG2859 Uncharacterized protein conserved in bacteria gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1747 VAA049_1748 VAA049_1748 VAA049_1748 1914461 1914673 - 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1748 VAA049_1749 VAA049_1749 VAA049_1749 1914919 1916997 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1749 VAA049_175 VAA049_175 epsM epsM 184248 184745 + general secretion pathway protein M [U] COG3149 Type II secretory pathway%2C component PulM gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_175 VAA049_1750 VAA049_1750 VAA049_1750 1917460 1917942 + L%2CD-transpeptidase catalytic domain protein [S] COG3034 Uncharacterized protein conserved in bacteria gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1750 VAA049_1751 VAA049_1751 VAA049_1751 1918012 1918224 - hypothetical protein conserved hypothetical protein~[S] COG3530 Uncharacterized protein conserved in bacteria gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1751 VAA049_1752 VAA049_1752 VAA049_1752 1918595 1918690 - hypothetical protein conserved hypothetical protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1752 VAA049_1753 VAA049_1753 tnaA tnaA 1919010 1920428 + tryptophanase tnaA_trp_ase: tryptophanase~[E] COG3033 Tryptophanase gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1753 VAA049_1754 VAA049_1754 VAA049_1754 1920528 1921742 + aromatic amino acid transport family protein araaP: aromatic amino acid transport family protein~[E] COG0814 Amino acid permeases gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1754 VAA049_1755 VAA049_1755 VAA049_1755 1921938 1922879 + universal stress family protein [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1755 VAA049_1756 VAA049_1756 VAA049_1756 1922954 1923151 + hypothetical protein conserved hypothetical protein gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1756 VAA049_1757 VAA049_1757 VAA049_1757 1923397 1925973 + NADH-Ubiquinone/plastoquinone (complex I)%2C various chains family protein [CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter%2C MnhA subunit gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1757 VAA049_1758 VAA049_1758 VAA049_1758 1925973 1926326 + NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein [P] COG1006 Multisubunit Na+/H+ antiporter%2C MnhC subunit gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1758 VAA049_1759 VAA049_1759 VAA049_1759 1926323 1927819 + NADH-Ubiquinone/plastoquinone (complex I)%2C various chains family protein [CP] COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter%2C MnhD subunit gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1759 VAA049_176 VAA049_176 VAA049_176 184747 185505 + type II secretion system (T2SS)%2C N family protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_176 VAA049_1760 VAA049_1760 VAA049_1760 1927816 1928292 + na+/H+ ion antiporter subunit [P] COG1863 Multisubunit Na+/H+ antiporter%2C MnhE subunit gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1760 VAA049_1761 VAA049_1761 VAA049_1761 1928285 1928563 + multiple resistance and pH regulation F family protein [P] COG2212 Multisubunit Na+/H+ antiporter%2C MnhF subunit gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1761 VAA049_1762 VAA049_1762 VAA049_1762 1928563 1928886 + monovalent cation/proton antiporter%2C MnhG/PhaG subunit CPA3_mnhG_phaG: monovalent cation/proton antiporter%2C MnhG/PhaG subunit~[P] COG1320 Multisubunit Na+/H+ antiporter%2C MnhG subunit gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1762 VAA049_1763 VAA049_1763 VAA049_1763 1928961 1930289 - FAD-binding domain protein [P] COG4097 Predicted ferric reductase gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1763 VAA049_1764 VAA049_1764 def def 1930439 1930945 - peptide deformylase pept_deformyl: peptide deformylase~[J] COG0242 N-formylmethionyl-tRNA deformylase gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1764 VAA049_1765 VAA049_1765 VAA049_1765 1931093 1934836 - peptidase M66 family protein gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1765 VAA049_1766 VAA049_1766 VAA049_1766 1935208 1936419 - FAD dependent oxidoreductase family protein [R] COG0579 Predicted dehydrogenase gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1766 VAA049_1767 VAA049_1767 VAA049_1767 1936416 1938557 - TRAP transporter%2C 4TM/12TM fusion family protein TRAP_fused: TRAP transporter%2C 4TM/12TM fusion family protein~[R] COG4666 TRAP-type uncharacterized transport system%2C fused permease components gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1767 VAA049_1768 VAA049_1768 VAA049_1768 1938729 1939736 - TRAP transporter solute receptor%2C TAXI family protein TRAP_TAXI: TRAP transporter solute receptor%2C TAXI family protein~[R] COG2358 TRAP-type uncharacterized transport system%2C periplasmic component gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1768 VAA049_1769 VAA049_1769 VAA049_1769 1940038 1941390 - AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1769 VAA049_177 VAA049_177 cysQ cysQ 185557 186384 - 3'(2')%2C5'-bisphosphate nucleotidase bisphos_cysQ: 3'(2')%2C5'-bisphosphate nucleotidase~[P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_177 VAA049_1770 VAA049_1770 VAA049_1770 1941587 1943608 + sensory box protein [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1770 VAA049_1771 VAA049_1771 VAA049_1771 1943722 1944891 - chitin binding domain protein [S] COG3397 Uncharacterized protein conserved in bacteria gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1771 VAA049_1772 VAA049_1772 VAA049_1772 1945338 1945685 + hypothetical protein conserved hypothetical protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1772 VAA049_1773 VAA049_1773 glpT glpT 1946110 1947468 + glycerol-3-phosphate transporter glpT: glycerol-3-phosphate transporter~[G] COG2271 Sugar phosphate permease gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1773 VAA049_1774 VAA049_1774 VAA049_1774 1947622 1948689 + glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1774 VAA049_1775 VAA049_1775 VAA049_1775 1948988 1950136 - eukaryotic aspartyl protease family protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1775 VAA049_1776 VAA049_1776 VAA049_1776 1950233 1951165 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1776 VAA049_1777 VAA049_1777 VAA049_1777 1951291 1952304 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1777 VAA049_1778 VAA049_1778 rbsK rbsK 1952315 1953235 - ribokinase D_ribokin_bact: ribokinase~[G] COG0524 Sugar kinases%2C ribokinase family gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1778 VAA049_1779 VAA049_1779 VAA049_1779 1953374 1954252 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1779 VAA049_178 VAA049_178 VAA049_178 186407 186955 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_178 VAA049_1780 VAA049_1780 VAA049_1780 1954313 1955296 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1780 VAA049_1781 VAA049_1781 ccmA ccmA 1955311 1956813 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1781 VAA049_1782 VAA049_1782 VAA049_1782 1956840 1957259 - rbsD / FucU transport family protein [G] COG1869 ABC-type ribose transport system%2C auxiliary component gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1782 VAA049_1783 VAA049_1783 VAA049_1783 1957543 1957803 + hypothetical protein conserved hypothetical protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1783 VAA049_1784 VAA049_1784 VAA049_1784 1957951 1958319 - hypothetical protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1784 VAA049_1785 VAA049_1785 VAA049_1785 1958539 1959579 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1785 VAA049_1786 VAA049_1786 VAA049_1786 1959679 1962582 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1786 VAA049_1787 VAA049_1787 VAA049_1787 1962820 1964082 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1787 VAA049_1788 VAA049_1788 VAA049_1788 1964133 1967678 - intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1788 VAA049_1789 VAA049_1789 VAA049_1789 1967694 1969103 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1789 VAA049_179 VAA049_179 VAA049_179 187094 187681 - nifU-like domain protein [S] COG0316 Uncharacterized conserved protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_179 VAA049_1790 VAA049_1790 VAA049_1790 1969113 1969769 - hypothetical protein conserved hypothetical protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1790 VAA049_1791 VAA049_1791 VAA049_1791 1969766 1971358 - AAA domain family protein [KT] COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1791 VAA049_1792 VAA049_1792 clpV clpV 1971361 1973970 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1792 VAA049_1793 VAA049_1793 VAA049_1793 1973996 1974769 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1793 VAA049_1794 VAA049_1794 VAA049_1794 1974772 1976106 - hypothetical protein GMP synthase C terminal domain protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1794 VAA049_1795 VAA049_1795 VAA049_1795 1976113 1976589 - type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1795 VAA049_1796 VAA049_1796 VAA049_1796 1976592 1978079 - FHA domain protein [T] COG3456 Uncharacterized conserved protein%2C contains FHA domain gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1796 VAA049_1797 VAA049_1797 VAA049_1797 1978082 1979098 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1797 VAA049_1798 VAA049_1798 VAA049_1798 1979062 1980831 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1798 VAA049_1799 VAA049_1799 VAA049_1799 1980837 1981274 - lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1799 VAA049_18 VAA049_18 ilvE ilvE 19304 20242 - branched-chain amino acid aminotransferase ilvE_I: branched-chain amino acid aminotransferase~[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_18 VAA049_180 VAA049_180 VAA049_180 187769 188257 - phosphoribosyl transferase domain protein [R] COG1040 Predicted amidophosphoribosyltransferases gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_180 VAA049_1800 VAA049_1800 VAA049_1800 1981277 1982755 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1800 VAA049_1801 VAA049_1801 VAA049_1801 1982796 1983302 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1801 VAA049_1802 VAA049_1802 VAA049_1802 1983734 1984738 - hypothetical protein conserved hypothetical protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1802 VAA049_1803 VAA049_1803 VAA049_1803 1984722 1985006 - PAAR motif family protein [S] COG4104 Uncharacterized conserved protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1803 VAA049_1804 VAA049_1804 VAA049_1804 1985779 1987458 + RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1804 VAA049_1805 VAA049_1805 VAA049_1805 1987500 1989260 - sulfate transporter family protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1805 VAA049_1806 VAA049_1806 VAA049_1806 1989468 1990118 + HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1806 VAA049_1807 VAA049_1807 VAA049_1807 1990312 1991850 + EAL domain protein [T] COG2200 FOG: EAL domain gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1807 VAA049_1808 VAA049_1808 VAA049_1808 1991865 1992221 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1808 VAA049_1809 VAA049_1809 VAA049_1809 1992258 1993298 - hypothetical protein oxidoreductase family%2C C-terminal alpha/beta domain protein~[R] COG0673 Predicted dehydrogenases and related proteins gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1809 VAA049_181 VAA049_181 bioH bioH 188559 189326 + pimelyl-[acyl-carrier protein] methyl ester esterase bioH: pimelyl-[acyl-carrier protein] methyl ester esterase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_181 VAA049_1810 VAA049_1810 pncB pncB 1993329 1994636 - nicotinate phosphoribosyltransferase NAPRTase: nicotinate phosphoribosyltransferase~[H] COG1488 Nicotinic acid phosphoribosyltransferase gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1810 VAA049_1811 VAA049_1811 VAA049_1811 1995035 1995751 + hypothetical protein conserved hypothetical protein~[F] COG1051 ADP-ribose pyrophosphatase gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1811 VAA049_1812 VAA049_1812 VAA049_1812 1995764 1997008 - proconvertase P-domain protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1812 VAA049_1813 VAA049_1813 VAA049_1813 1997051 1997740 - hypothetical protein conserved hypothetical protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1813 VAA049_1814 VAA049_1814 VAA049_1814 1998018 1998374 - hxlR-like helix-turn-helix family protein [K] COG1733 Predicted transcriptional regulators gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1814 VAA049_1815 VAA049_1815 VAA049_1815 1998873 1999502 + PGAP1-like family protein [R] COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1815 VAA049_1816 VAA049_1816 VAA049_1816 1999673 1999969 - helix-turn-helix family protein [R] COG1342 Predicted DNA-binding proteins gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1816 VAA049_1817 VAA049_1817 VAA049_1817 2000199 2001092 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1817 VAA049_1818 VAA049_1818 VAA049_1818 2001357 2002658 + dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[C] COG1301 Na+/H+-dicarboxylate symporters gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1818 VAA049_1819 VAA049_1819 VAA049_1819 2002787 2002921 - hypothetical protein conserved hypothetical protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1819 VAA049_182 VAA049_182 VAA049_182 189488 189958 + putative aTP-dependent Lon protease gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_182 VAA049_1820 VAA049_1820 VAA049_1820 2003025 2003375 - hypothetical protein conserved hypothetical protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1820 VAA049_1821 VAA049_1821 VAA049_1821 2003506 2004630 - major Facilitator Superfamily protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1821 VAA049_1822 VAA049_1822 soxR soxR 2004889 2005335 + redox-sensitive transcriptional activator SoxR soxR: redox-sensitive transcriptional activator SoxR~[K] COG0789 Predicted transcriptional regulators gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1822 VAA049_1823 VAA049_1823 VAA049_1823 2005377 2006588 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1823 VAA049_1824 VAA049_1824 VAA049_1824 2006678 2007565 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1824 VAA049_1825 VAA049_1825 VAA049_1825 2007623 2007727 - hypothetical protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1825 VAA049_1826 VAA049_1826 VAA049_1826 2007788 2009611 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1826 VAA049_1827 VAA049_1827 VAA049_1827 2009732 2010955 - peptidase M23 family protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1827 VAA049_1828 VAA049_1828 VAA049_1828 2011216 2011515 - putative 1%2C4-alpha-glucan branching enzyme gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1828 VAA049_1829 VAA049_1829 VAA049_1829 2011853 2013514 + sulfate permease family protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1829 VAA049_183 VAA049_183 VAA049_183 190053 192374 - S1 RNA binding domain protein [K] COG2183 Transcriptional accessory protein gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_183 VAA049_1830 VAA049_1830 VAA049_1830 2013950 2015326 + nucleoside recognition family protein [S] COG3314 Uncharacterized protein conserved in bacteria gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1830 VAA049_1831 VAA049_1831 VAA049_1831 2015617 2016084 + oxidoreductase molybdopterin binding domain protein [S] COG3915 Uncharacterized protein conserved in bacteria gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1831 VAA049_1832 VAA049_1832 VAA049_1832 2016081 2017181 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1832 VAA049_1833 VAA049_1833 pstB pstB 2017228 2017983 - phosphate ABC transporter%2C ATP-binding protein 3a0107s01c2: phosphate ABC transporter%2C ATP-binding protein~[P] COG1117 ABC-type phosphate transport system%2C ATPase component gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1833 VAA049_1834 VAA049_1834 pstA pstA 2018012 2018875 - phosphate ABC transporter%2C permease protein PstA 3a0107s02c: phosphate ABC transporter%2C permease protein PstA~[P] COG0581 ABC-type phosphate transport system%2C permease component gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1834 VAA049_1835 VAA049_1835 pstC pstC 2018881 2019801 - phosphate ABC transporter%2C permease protein PstC phosphate_pstC: phosphate ABC transporter%2C permease protein PstC~[P] COG0573 ABC-type phosphate transport system%2C permease component gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1835 VAA049_1836 VAA049_1836 pstS pstS 2019880 2020701 - phosphate binding family protein ptsS_2: phosphate binding family protein~[P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1836 VAA049_1837 VAA049_1837 VAA049_1837 2021072 2022715 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1837 VAA049_1838 VAA049_1838 VAA049_1838 2022849 2023409 - hypothetical protein conserved hypothetical protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1838 VAA049_1839 VAA049_1839 VAA049_1839 2023406 2024848 - hypothetical protein conserved hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1839 VAA049_184 VAA049_184 greB greB 192744 193226 + transcription elongation factor GreB greB: transcription elongation factor GreB~[K] COG0782 Transcription elongation factor gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_184 VAA049_1840 VAA049_1840 VAA049_1840 2024845 2027151 - fungalysin metallopeptidase family protein [O] COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1840 VAA049_1841 VAA049_1841 VAA049_1841 2027161 2029302 - TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1841 VAA049_1842 VAA049_1842 VAA049_1842 2029302 2031299 - alpha/beta hydrolase fold family protein [E] COG1770 Protease II gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1842 VAA049_1843 VAA049_1843 VAA049_1843 2031512 2032858 - hypothetical protein conserved hypothetical protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1843 VAA049_1844 VAA049_1844 VAA049_1844 2033400 2033648 + lipoleucine-zipper family protein [M] COG4238 Murein lipoprotein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1844 VAA049_1845 VAA049_1845 VAA049_1845 2033734 2034654 - L%2CD-transpeptidase catalytic domain protein [S] COG1376 Uncharacterized protein conserved in bacteria gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1845 VAA049_1846 VAA049_1846 phrA phrA 2034663 2036072 - deoxyribodipyrimidine photo-lyase [L] COG0415 Deoxyribodipyrimidine photolyase gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1846 VAA049_1847 VAA049_1847 VAA049_1847 2036082 2036879 - merR regulatory family protein [K] COG0789 Predicted transcriptional regulators gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1847 VAA049_1848 VAA049_1848 VAA049_1848 2036869 2037822 - hypothetical protein conserved hypothetical protein~[S] COG3272 Uncharacterized conserved protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1848 VAA049_1849 VAA049_1849 deoD deoD 2038144 2038854 + purine nucleoside phosphorylase deoD: purine nucleoside phosphorylase~[F] COG0813 Purine-nucleoside phosphorylase gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1849 VAA049_185 VAA049_185 VAA049_185 193268 194056 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_185 VAA049_1850 VAA049_1850 VAA049_1850 2038919 2040388 + hypothetical protein conserved hypothetical protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1850 VAA049_1851 VAA049_1851 VAA049_1851 2040543 2042030 + hypothetical protein conserved hypothetical protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1851 VAA049_1852 VAA049_1852 VAA049_1852 2042011 2043591 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1852 VAA049_1853 VAA049_1853 VAA049_1853 2043726 2044115 + hypothetical protein conserved hypothetical protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1853 VAA049_1854 VAA049_1854 VAA049_1854 2044115 2045245 + hlyD secretion family protein [V] COG1566 Multidrug resistance efflux pump gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1854 VAA049_1855 VAA049_1855 VAA049_1855 2045441 2048695 - hypothetical protein dipeptidyl peptidase IV (DPP IV) N-terminal region family protein~[M] COG0793 Periplasmic protease gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1855 VAA049_1856 VAA049_1856 VAA049_1856 2048928 2049212 - GCN5-related N-acetyl-transferase family protein [R] COG2388 Predicted acetyltransferase gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1856 VAA049_1857 VAA049_1857 VAA049_1857 2049344 2050102 + cyclic di-GMP binding protein cyclic di-GMP binding protein VCA0042 gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1857 VAA049_1858 VAA049_1858 gltS gltS 2050181 2051407 - sodium/glutamate symporter gltS: sodium/glutamate symporter~[E] COG0786 Na+/glutamate symporter gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1858 VAA049_1859 VAA049_1859 VAA049_1859 2051961 2052872 + hypothetical protein conserved hypothetical protein~[S] COG2035 Predicted membrane protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1859 VAA049_186 VAA049_186 VAA049_186 194346 195425 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_186 VAA049_1860 VAA049_1860 VAA049_1860 2053074 2053493 + hypothetical protein conserved hypothetical protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1860 VAA049_1861 VAA049_1861 VAA049_1861 2053490 2054071 + SCO1/SenC family protein [R] COG1999 Uncharacterized protein SCO1/SenC/PrrC%2C involved in biogenesis of respiratory and photosynthetic systems gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1861 VAA049_1862 VAA049_1862 VAA049_1862 2054085 2054537 + hypothetical protein conserved hypothetical protein~[S] COG2847 Uncharacterized protein conserved in bacteria gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1862 VAA049_1863 VAA049_1863 VAA049_1863 2054879 2056096 + dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[E] COG3633 Na+/serine symporter gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1863 VAA049_1864 VAA049_1864 VAA049_1864 2056150 2056902 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1864 VAA049_1865 VAA049_1865 VAA049_1865 2057132 2057962 + HDOD domain protein [T] COG1639 Predicted signal transduction protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1865 VAA049_1866 VAA049_1866 VAA049_1866 2058022 2059896 - hypothetical protein conserved hypothetical protein~[R] COG3211 Predicted phosphatase gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1866 VAA049_1867 VAA049_1867 VAA049_1867 2060300 2060860 + hypothetical protein conserved hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1867 VAA049_1868 VAA049_1868 VAA049_1868 2060958 2062523 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1868 VAA049_1869 VAA049_1869 VAA049_1869 2062644 2063480 - hypothetical protein conserved hypothetical protein gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1869 VAA049_187 VAA049_187 ccmA ccmA 195489 196970 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_187 VAA049_1870 VAA049_1870 VAA049_1870 2063487 2064221 - transcriptional regulator%2C putative [K] COG1414 Transcriptional regulator gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1870 VAA049_1871 VAA049_1871 VAA049_1871 2064587 2067133 - hypothetical protein chitinase A%2C N-terminal domain protein~[G] COG3325 Chitinase gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1871 VAA049_1872 VAA049_1872 VAA049_1872 2067565 2068200 + hypothetical protein conserved hypothetical protein~[S] COG3110 Uncharacterized protein conserved in bacteria gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1872 VAA049_1873 VAA049_1873 VAA049_1873 2068296 2069684 - transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1873 VAA049_1874 VAA049_1874 VAA049_1874 2069998 2070954 + membrane transport family protein [R] COG0679 Predicted permeases gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1874 VAA049_1875 VAA049_1875 VAA049_1875 2071085 2072110 + acyltransferase family protein [S] COG3274 Uncharacterized protein conserved in bacteria gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1875 VAA049_1876 VAA049_1876 VAA049_1876 2072283 2072684 - MAPEG family protein [R] COG3788 Uncharacterized relative of glutathione S-transferase%2C MAPEG superfamily gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1876 VAA049_1877 VAA049_1877 VAA049_1877 2072787 2073515 - hypothetical protein conserved hypothetical protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1877 VAA049_1878 VAA049_1878 VAA049_1878 2073516 2076776 - hypothetical protein conserved hypothetical protein gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1878 VAA049_1879 VAA049_1879 VAA049_1879 2076773 2077660 - hypothetical protein conserved hypothetical protein gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1879 VAA049_188 VAA049_188 VAA049_188 196985 197974 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_188 VAA049_1880 VAA049_1880 VAA049_1880 2077660 2079744 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1880 VAA049_1881 VAA049_1881 VAA049_1881 2079872 2080390 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1881 VAA049_1882 VAA049_1882 glgB glgB 2080785 2082974 - 1%2C4-alpha-glucan branching enzyme branching_enzym: 1%2C4-alpha-glucan branching enzyme~[G] COG0296 1%2C4-alpha-glucan branching enzyme gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1882 VAA049_1883 VAA049_1883 malQ malQ 2083180 2085360 - 4-alpha-glucanotransferase malQ: 4-alpha-glucanotransferase~[G] COG1640 4-alpha-glucanotransferase gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1883 VAA049_1884 VAA049_1884 glgP glgP 2085446 2087899 - glycogen/starch/alpha-glucan phosphorylases family protein P_ylase: glycogen/starch/alpha-glucan phosphorylases family protein~[G] COG0058 Glucan phosphorylase gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1884 VAA049_1885 VAA049_1885 VAA049_1885 2088476 2091184 + bacterial regulatory s%2C luxR family protein [K] COG2909 ATP-dependent transcriptional regulator gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1885 VAA049_1886 VAA049_1886 VAA049_1886 2091250 2091606 - hypothetical protein conserved hypothetical protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1886 VAA049_1887 VAA049_1887 VAA049_1887 2091885 2093546 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1887 VAA049_1888 VAA049_1888 VAA049_1888 2093650 2094525 - UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain protein [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1888 VAA049_1889 VAA049_1889 VAA049_1889 2094640 2095359 - transcriptional regulator family protein [S] COG0217 Uncharacterized conserved protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1889 VAA049_189 VAA049_189 VAA049_189 198004 199611 + hypothetical protein glycosyl hydrolase family 3 N terminal domain protein~[G] COG1472 Beta-glucosidase-related glycosidases gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_189 VAA049_1890 VAA049_1890 VAA049_1890 2095447 2095656 - hypothetical protein conserved hypothetical protein gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1890 VAA049_1891 VAA049_1891 VAA049_1891 2095819 2096016 - hypothetical protein conserved hypothetical protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1891 VAA049_1892 VAA049_1892 VAA049_1892 2096379 2096840 + hypothetical protein conserved hypothetical protein gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1892 VAA049_1893 VAA049_1893 VAA049_1893 2097060 2099036 - hypothetical protein conserved hypothetical protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1893 VAA049_1894 VAA049_1894 VAA049_1894 2100271 2101488 + ATPase MipZ family protein [D] COG1192 ATPases involved in chromosome partitioning gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1894 VAA049_1895 VAA049_1895 VAA049_1895 2101496 2102467 + ParB/RepB/Spo0J family partition domain protein parB_part: ParB/RepB/Spo0J family partition domain protein~[K] COG1475 Predicted transcriptional regulators gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1895 VAA049_1896 VAA049_1896 VAA049_1896 2102528 2103559 - bacterial extracellular solute-binding family protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1896 VAA049_1897 VAA049_1897 VAA049_1897 2103780 2105813 + acetyltransferase family protein [R] COG1444 Predicted P-loop ATPase fused to an acetyltransferase gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1897 VAA049_1898 VAA049_1898 VAA049_1898 2105987 2106589 + thermostable hemolysin family protein gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1898 VAA049_1899 VAA049_1899 VAA049_1899 2106600 2108123 + AMP-binding enzyme family protein [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1899 VAA049_19 VAA049_19 VAA049_19 20254 20538 - ACT domain protein [S] COG3978 Acetolactate synthase (isozyme II)%2C small (regulatory) subunit gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_19 VAA049_190 VAA049_190 VAA049_190 199744 201930 + carbohydrate binding domain protein [S] COG1652 Uncharacterized protein containing LysM domain gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_190 VAA049_1900 VAA049_1900 VAA049_1900 2108166 2108849 + heme oxygenase family protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1900 VAA049_1901 VAA049_1901 VAA049_1901 2108859 2109656 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1901 VAA049_1902 VAA049_1902 VAA049_1902 2109684 2110316 + tetratricopeptide repeat family protein gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1902 VAA049_1903 VAA049_1903 VAA049_1903 2110321 2110977 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1903 VAA049_1904 VAA049_1904 VAA049_1904 2111039 2112382 + his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1904 VAA049_1905 VAA049_1905 VAA049_1905 2112524 2114167 - hypothetical protein conserved hypothetical protein~[R] COG2194 Predicted membrane-associated%2C metal-dependent hydrolase gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1905 VAA049_1906 VAA049_1906 ccmA ccmA 2114431 2115813 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG1123 ATPase components of various ABC-type transport systems%2C contain duplicated ATPase gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1906 VAA049_1907 VAA049_1907 VAA049_1907 2115810 2116601 - binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1907 VAA049_1908 VAA049_1908 VAA049_1908 2116603 2117559 - binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1908 VAA049_1909 VAA049_1909 VAA049_1909 2117552 2119084 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1909 VAA049_191 VAA049_191 VAA049_191 201987 203372 - transposase Tn5 dimerization domain protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_191 VAA049_1910 VAA049_1910 VAA049_1910 2119354 2119623 + STAS domain protein [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1910 VAA049_1911 VAA049_1911 VAA049_1911 2119634 2119993 + response regulator [T] COG0784 FOG: CheY-like receiver gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1911 VAA049_1912 VAA049_1912 VAA049_1912 2120042 2122204 + cheW-like domain protein [NT] COG0643 Chemotaxis protein histidine kinase and related kinases gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1912 VAA049_1913 VAA049_1913 VAA049_1913 2122213 2122740 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1913 VAA049_1914 VAA049_1914 VAA049_1914 2122740 2123198 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1914 VAA049_1915 VAA049_1915 VAA049_1915 2123212 2125248 + sensory box protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1915 VAA049_1916 VAA049_1916 VAA049_1916 2125263 2126093 + cheR methyltransferase%2C SAM binding domain protein [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1916 VAA049_1917 VAA049_1917 VAA049_1917 2126080 2126733 + cheD chemotactic sensory transduction family protein [NT] COG1871 Chemotaxis protein%3B stimulates methylation of MCP proteins gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1917 VAA049_1918 VAA049_1918 VAA049_1918 2126730 2127770 + cheB methylesterase family protein [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1918 VAA049_1919 VAA049_1919 VAA049_1919 2127813 2128967 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1919 VAA049_192 VAA049_192 ompR ompR 203641 204363 + transcriptional regulatory protein ompR [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_192 VAA049_1920 VAA049_1920 VAA049_1920 2128977 2129276 + STAS domain protein [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1920 VAA049_1921 VAA049_1921 VAA049_1921 2129300 2131006 + stage II sporulation E family protein [TK] COG2208 Serine phosphatase RsbU%2C regulator of sigma subunit gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1921 VAA049_1922 VAA049_1922 VAA049_1922 2131265 2132935 + hypothetical protein conserved hypothetical protein~[L] COG1315 Predicted polymerase%2C most proteins contain PALM domain%2C HD hydrolase domain and Zn-ribbon domain gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1922 VAA049_1923 VAA049_1923 VAA049_1923 2133070 2135184 - type I secretion system ATPase family protein type_I_sec_LssB: type I secretion system ATPase family protein~[V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1923 VAA049_1924 VAA049_1924 VAA049_1924 2135199 2137109 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1924 VAA049_1925 VAA049_1925 VAA049_1925 2137115 2137777 - bacterial transglutaminase-like cysteine ase BTLCP family protein [S] COG3672 Predicted periplasmic protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1925 VAA049_1926 VAA049_1926 VAA049_1926 2137786 2139177 - type I secretion membrane fusion%2C HlyD family protein type_I_hlyD: type I secretion membrane fusion%2C HlyD family protein~[M] COG0845 Membrane-fusion protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1926 VAA049_1927 VAA049_1927 pdxH pdxH 2139401 2140036 + pyridoxamine 5'-phosphate oxidase pdxH: pyridoxamine 5'-phosphate oxidase~[H] COG0259 Pyridoxamine-phosphate oxidase gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1927 VAA049_1928 VAA049_1928 VAA049_1928 2140065 2140805 - sensory box protein [T] COG2202 FOG: PAS/PAC domain gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1928 VAA049_1929 VAA049_1929 VAA049_1929 2141124 2142941 - sulfatase-modifying factor enzyme 1 family protein [S] COG1262 Uncharacterized conserved protein gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1929 VAA049_193 VAA049_193 VAA049_193 204432 205748 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_193 VAA049_1930 VAA049_1930 VAA049_1930 2143101 2144207 - PEGA domain protein gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1930 VAA049_1931 VAA049_1931 VAA049_1931 2144599 2145462 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1931 VAA049_1932 VAA049_1932 VAA049_1932 2145802 2148921 + delta-1-pyrroline-5-carboxylate dehydrogenase D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase~[E] COG0506 Proline dehydrogenase gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1932 VAA049_1933 VAA049_1933 VAA049_1933 2148943 2149641 + aldehyde dehydrogenase family protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1933 VAA049_1934 VAA049_1934 putP putP 2149714 2151204 + sodium/proline symporter na_Pro_sym: sodium/proline symporter~[ER] COG0591 Na+/proline symporter gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1934 VAA049_1935 VAA049_1935 VAA049_1935 2151388 2151609 + hypothetical protein conserved hypothetical protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1935 VAA049_1936 VAA049_1936 VAA049_1936 2152006 2153871 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1936 VAA049_1937 VAA049_1937 VAA049_1937 2154068 2154550 + asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1937 VAA049_1938 VAA049_1938 VAA049_1938 2154726 2156168 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1938 VAA049_1939 VAA049_1939 VAA049_1939 2157151 2159313 + hypothetical protein orn/Lys/Arg decarboxylase%2C C-terminal domain protein~[E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1939 VAA049_194 VAA049_194 pbuX pbuX 205773 207173 - xanthine permease family protein pbuX: xanthine permease family protein~[F] COG2233 Xanthine/uracil permeases gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_194 VAA049_1940 VAA049_1940 potE potE 2159381 2160700 + putrescine-ornithine antiporter antiport_PotE: putrescine-ornithine antiporter~[E] COG0531 Amino acid transporters gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1940 VAA049_1941 VAA049_1941 ribB ribB 2161159 2161815 + 3%2C4-dihydroxy-2-butanone-4-phosphate synthase ribB: 3%2C4-dihydroxy-2-butanone-4-phosphate synthase~[H] COG0108 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1941 VAA049_1942 VAA049_1942 VAA049_1942 2161880 2162485 - hypothetical protein conserved hypothetical protein~[S] COG1901 Uncharacterized conserved protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1942 VAA049_1943 VAA049_1943 VAA049_1943 2162591 2163496 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1943 VAA049_1944 VAA049_1944 VAA049_1944 2163643 2164362 + short chain dehydrogenase family protein [R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1944 VAA049_1945 VAA049_1945 VAA049_1945 2164750 2167062 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1945 VAA049_1946 VAA049_1946 VAA049_1946 2167105 2167995 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1946 VAA049_1947 VAA049_1947 VAA049_1947 2168128 2168766 + NAD dependent epimerase/dehydratase family protein [R] COG2910 Putative NADH-flavin reductase gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1947 VAA049_1948 VAA049_1948 VAA049_1948 2168842 2169783 - helix-turn-helix domain protein [K] COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1948 VAA049_1949 VAA049_1949 VAA049_1949 2169885 2170421 + isochorismatase family protein [Q] COG1335 Amidases related to nicotinamidase gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1949 VAA049_195 VAA049_195 recG recG 207520 209598 - ATP-dependent DNA helicase RecG recG: ATP-dependent DNA helicase RecG~[LK] COG1200 RecG-like helicase gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_195 VAA049_1950 VAA049_1950 VAA049_1950 2170469 2170864 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1950 VAA049_1951 VAA049_1951 VAA049_1951 2170937 2171416 - winged helix DNA-binding domain protein [K] COG1846 Transcriptional regulators gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1951 VAA049_1952 VAA049_1952 VAA049_1952 2171565 2172470 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1952 VAA049_1953 VAA049_1953 VAA049_1953 2172638 2173360 + sulfite exporter TauE/SafE family protein [R] COG0730 Predicted permeases gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1953 VAA049_1954 VAA049_1954 VAA049_1954 2173864 2174730 - phage antirepressor KilAC domain protein gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1954 VAA049_1955 VAA049_1955 VAA049_1955 2173436 2173867 + hypothetical protein conserved hypothetical protein~[S] COG3304 Predicted membrane protein gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1955 VAA049_1956 VAA049_1956 VAA049_1956 2174748 2175668 - oxidoreductase%2C Gfo/Idh/MocA family [R] COG0673 Predicted dehydrogenases and related proteins gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1956 VAA049_1957 VAA049_1957 mtlR mtlR 2175784 2176314 - mannitol operon repressor [K] COG3722 Transcriptional regulator gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1957 VAA049_1958 VAA049_1958 VAA049_1958 2176414 2177568 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1958 VAA049_1959 VAA049_1959 mtlA mtlA 2177669 2179618 - PTS system%2C mannitol-specific IIC component family protein mtlA: PTS system%2C mannitol-specific IIC component family protein~[G] COG2213 Phosphotransferase system%2C mannitol-specific IIBC component gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1959 VAA049_196 VAA049_196 spoT spoT 209717 211834 - guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase [TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_196 VAA049_1960 VAA049_1960 VAA049_1960 2180292 2181995 - phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1960 VAA049_1961 VAA049_1961 VAA049_1961 2182108 2183004 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1961 VAA049_1962 VAA049_1962 VAA049_1962 2183019 2183855 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1962 VAA049_1963 VAA049_1963 VAA049_1963 2183906 2184703 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1963 VAA049_1964 VAA049_1964 VAA049_1964 2184703 2185416 - ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1964 VAA049_1965 VAA049_1965 VAA049_1965 2185724 2186776 + 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1965 VAA049_1966 VAA049_1966 VAA049_1966 2186870 2187118 - hypothetical protein conserved hypothetical protein gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1966 VAA049_1967 VAA049_1967 VAA049_1967 2187322 2189301 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1967 VAA049_1968 VAA049_1968 VAA049_1968 2189310 2190686 + bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1968 VAA049_1969 VAA049_1969 VAA049_1969 2190954 2191361 + hypothetical protein conserved hypothetical protein gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1969 VAA049_197 VAA049_197 rpoZ rpoZ 211866 212138 - DNA-directed RNA polymerase%2C omega subunit rpoZ: DNA-directed RNA polymerase%2C omega subunit~[K] COG1758 DNA-directed RNA polymerase%2C subunit K/omega gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_197 VAA049_1970 VAA049_1970 VAA049_1970 2191476 2193107 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1970 VAA049_1971 VAA049_1971 VAA049_1971 2193408 2193659 - hypothetical protein conserved hypothetical protein gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1971 VAA049_1972 VAA049_1972 glgX glgX 2193794 2195665 - glycogen debranching enzyme GlgX glgX_debranch: glycogen debranching enzyme GlgX~[G] COG1523 Type II secretory pathway%2C pullulanase PulA and related glycosidases gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1972 VAA049_1973 VAA049_1973 VAA049_1973 2196196 2197434 + lamB porin family protein [G] COG4580 Maltoporin (phage lambda and maltose receptor) gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1973 VAA049_1974 VAA049_1974 VAA049_1974 2197639 2198475 + maltose operon periplasmic family protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1974 VAA049_1975 VAA049_1975 VAA049_1975 2198628 2199785 + sel1 repeat family protein [R] COG0790 FOG: TPR repeat%2C SEL1 subfamily gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1975 VAA049_1976 VAA049_1976 nagB nagB 2199916 2200716 - glucosamine-6-phosphate deaminase nagB: glucosamine-6-phosphate deaminase~[G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1976 VAA049_1977 VAA049_1977 VAA049_1977 2201082 2201333 + hypothetical protein conserved hypothetical protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1977 VAA049_1978 VAA049_1978 VAA049_1978 2201460 2203451 - hypothetical protein conserved hypothetical protein~[S] COG3930 Uncharacterized protein conserved in bacteria gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1978 VAA049_1979 VAA049_1979 VAA049_1979 2203530 2203889 - hypothetical protein conserved hypothetical protein~[S] COG3085 Uncharacterized protein conserved in bacteria gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1979 VAA049_198 VAA049_198 gmk gmk 212246 212869 - guanylate kinase guanyl_kin: guanylate kinase~[F] COG0194 Guanylate kinase gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_198 VAA049_1980 VAA049_1980 VAA049_1980 2204040 2204924 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1980 VAA049_1981 VAA049_1981 VAA049_1981 2205001 2205444 - TQO small subunit DoxD family protein [S] COG2259 Predicted membrane protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1981 VAA049_1982 VAA049_1982 VAA049_1982 2205703 2207061 + helix-turn-helix domain protein [L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1982 VAA049_1983 VAA049_1983 VAA049_1983 2207062 2207535 + methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[L] COG0350 Methylated DNA-protein cysteine methyltransferase gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1983 VAA049_1984 VAA049_1984 VAA049_1984 2207546 2207947 + hypothetical protein conserved hypothetical protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1984 VAA049_1985 VAA049_1985 VAA049_1985 2208009 2209415 - transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1985 VAA049_1986 VAA049_1986 VAA049_1986 2209686 2211248 + histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1986 VAA049_1987 VAA049_1987 VAA049_1987 2211925 2213358 - citrate transporter family protein [P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1987 VAA049_1988 VAA049_1988 VAA049_1988 2211251 2211928 + response regulator [KT] COG4565 Response regulator of citrate/malate metabolism gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1988 VAA049_1989 VAA049_1989 VAA049_1989 2213750 2214481 + nucleoside recognition family protein [S] COG3314 Uncharacterized protein conserved in bacteria gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1989 VAA049_199 VAA049_199 VAA049_199 213237 213908 + hypothetical protein conserved hypothetical integral membrane family protein~[S] COG1738 Uncharacterized conserved protein gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_199 VAA049_1990 VAA049_1990 VAA049_1990 2214478 2214945 + nucleoside recognition family protein [S] COG0700 Uncharacterized membrane protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1990 VAA049_1991 VAA049_1991 VAA049_1991 2215159 2215776 - glutaredoxin family protein [O] COG0695 Glutaredoxin and related proteins gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1991 VAA049_1992 VAA049_1992 VAA049_1992 2215824 2216681 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1992 VAA049_1993 VAA049_1993 VAA049_1993 2216881 2217876 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1993 VAA049_1994 VAA049_1994 VAA049_1994 2218132 2218554 - organic hydroperoxide resistance protein%2C putative [O] COG1764 Predicted redox protein%2C regulator of disulfide bond formation gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1994 VAA049_1995 VAA049_1995 VAA049_1995 2218666 2219124 + winged helix DNA-binding domain protein [K] COG1846 Transcriptional regulators gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1995 VAA049_1996 VAA049_1996 VAA049_1996 2219240 2219854 + fumarylacetoacetate (FAA) hydrolase family protein [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1996 VAA049_1997 VAA049_1997 VAA049_1997 2219906 2220223 - branched-chain amino acid transport family protein [S] COG4392 Predicted membrane protein gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1997 VAA049_1998 VAA049_1998 VAA049_1998 2220220 2220939 - azlC family protein [E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1998 VAA049_1999 VAA049_1999 VAA049_1999 2221091 2221921 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_1999 VAA049_2 VAA049_2 dnaN dnaN 1499 2599 + DNA polymerase III%2C beta subunit dnan: DNA polymerase III%2C beta subunit~[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2 VAA049_20 VAA049_20 ilvB ilvB 20550 22196 - acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_20 VAA049_200 VAA049_200 VAA049_200 214006 215709 - putative sodium:solute symporter%2C subfamily protein na_symport_lg: putative sodium:solute symporter%2C VC_2705 subfamily protein~[R] COG4147 Predicted symporter gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_200 VAA049_2000 VAA049_2000 VAA049_2000 2222125 2222754 + lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2000 VAA049_2001 VAA049_2001 VAA049_2001 2222826 2223401 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2001 VAA049_2002 VAA049_2002 VAA049_2002 2223551 2224594 + flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2002 VAA049_2003 VAA049_2003 VAA049_2003 2224669 2225373 - hypothetical protein conserved hypothetical protein gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2003 VAA049_2004 VAA049_2004 VAA049_2004 2225525 2227384 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2004 VAA049_2005 VAA049_2005 VAA049_2005 2227750 2228721 + amidinotransferase family protein [S] COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2005 VAA049_2006 VAA049_2006 VAA049_2006 2228897 2230117 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2006 VAA049_2007 VAA049_2007 VAA049_2007 2230196 2231524 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2007 VAA049_2008 VAA049_2008 VAA049_2008 2231888 2233444 - sensory box protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2008 VAA049_2009 VAA049_2009 ppsA ppsA 2233627 2235999 - phosphoenolpyruvate synthase PEP_synth: phosphoenolpyruvate synthase~[G] COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2009 VAA049_201 VAA049_201 VAA049_201 215720 215986 - putative solute:sodium symporter small subunit domain protein na_symport_sm: putative solute:sodium symporter small subunit domain protein~[S] COG4327 Predicted membrane protein gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_201 VAA049_2010 VAA049_2010 VAA049_2010 2236177 2237004 + kinase/pyrophosphorylase family protein [S] COG1806 Uncharacterized protein conserved in bacteria gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2010 VAA049_2011 VAA049_2011 VAA049_2011 2237088 2239967 - 4Fe-4S dicluster domain protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2011 VAA049_2012 VAA049_2012 VAA049_2012 2240065 2241201 - IMP dehydrogenase / GMP reductase domain protein [C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2012 VAA049_2013 VAA049_2013 VAA049_2013 2241322 2243016 - transporter%2C lactate permease family protein lctP: transporter%2C lactate permease family protein~[C] COG1620 L-lactate permease gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2013 VAA049_2014 VAA049_2014 VAA049_2014 2243222 2244121 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2014 VAA049_2015 VAA049_2015 VAA049_2015 2244275 2245018 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2015 VAA049_2016 VAA049_2016 VAA049_2016 2245149 2246696 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2016 VAA049_2017 VAA049_2017 VAA049_2017 2246719 2247447 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2017 VAA049_2018 VAA049_2018 nikE nikE 2247614 2249233 - nickel import ATP-binding protein NikE nickel_nikE: nickel import ATP-binding protein NikE~[R] COG4172 ABC-type uncharacterized transport system%2C duplicated ATPase component gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2018 VAA049_2019 VAA049_2019 VAA049_2019 2249262 2249756 - hypothetical protein conserved hypothetical protein gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2019 VAA049_202 VAA049_202 VAA049_202 216365 218110 + trkA-C domain protein [P] COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_202 VAA049_2020 VAA049_2020 VAA049_2020 2249960 2252320 + hypothetical protein lon protease (S16) C-terminal proteolytic domain protein~[O] COG1067 Predicted ATP-dependent protease gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2020 VAA049_2021 VAA049_2021 VAA049_2021 2252592 2254220 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2021 VAA049_2022 VAA049_2022 VAA049_2022 2254253 2254426 - hypothetical protein conserved hypothetical protein gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2022 VAA049_2023 VAA049_2023 VAA049_2023 2254639 2255787 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2023 VAA049_2024 VAA049_2024 VAA049_2024 2255796 2256236 - hypothetical protein conserved hypothetical protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2024 VAA049_2025 VAA049_2025 VAA049_2025 2256775 2257062 + hypothetical protein conserved hypothetical protein~[S] COG3123 Uncharacterized protein conserved in bacteria gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2025 VAA049_2026 VAA049_2026 VAA049_2026 2257200 2258048 - pirin family protein [R] COG1741 Pirin-related protein gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2026 VAA049_2027 VAA049_2027 VAA049_2027 2258223 2258519 + hypothetical protein conserved hypothetical protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2027 VAA049_2028 VAA049_2028 VAA049_2028 2258522 2259697 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2028 VAA049_2029 VAA049_2029 VAA049_2029 2259864 2260769 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2029 VAA049_203 VAA049_203 VAA049_203 218209 218838 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_203 VAA049_2030 VAA049_2030 VAA049_2030 2260870 2261793 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2030 VAA049_2031 VAA049_2031 VAA049_2031 2261818 2263026 - hypothetical protein conserved hypothetical protein gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2031 VAA049_2032 VAA049_2032 VAA049_2032 2263316 2263924 - 2OG-Fe(II) oxygenase superfamily protein [L] COG3145 Alkylated DNA repair protein gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2032 VAA049_2033 VAA049_2033 VAA049_2033 2264266 2265639 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2033 VAA049_2034 VAA049_2034 VAA049_2034 2265919 2267352 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2034 VAA049_2035 VAA049_2035 VAA049_2035 2267585 2268163 + putative malate synthase [C] COG2225 Malate synthase gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2035 VAA049_2036 VAA049_2036 VAA049_2036 2268283 2269299 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2036 VAA049_2037 VAA049_2037 VAA049_2037 2269471 2269998 + winged helix DNA-binding domain protein [K] COG1846 Transcriptional regulators gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2037 VAA049_2038 VAA049_2038 VAA049_2038 2270074 2270949 - response regulator [NT] COG0835 Chemotaxis signal transduction protein gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2038 VAA049_2039 VAA049_2039 VAA049_2039 2271169 2271447 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2039 VAA049_204 VAA049_204 VAA049_204 219011 220813 - cytochrome C biogenesis transmembrane region family protein [OC] COG4232 Thiol:disulfide interchange protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_204 VAA049_2040 VAA049_2040 VAA049_2040 2272089 2272763 + transcriptional regulator%2C LuxR family [K] COG2771 DNA-binding HTH domain-containing proteins gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2040 VAA049_2041 VAA049_2041 VAA049_2041 2272937 2273257 - heavy-metal-binding family protein [S] COG0393 Uncharacterized conserved protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2041 VAA049_2042 VAA049_2042 VAA049_2042 2273473 2274081 + 2OG-Fe(II) oxygenase superfamily protein [O] COG3751 Predicted proline hydroxylase gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2042 VAA049_2043 VAA049_2043 VAA049_2043 2274219 2274464 - hypothetical protein modulator of Rho-dependent transcription termination family protein~[K] COG4568 Transcriptional antiterminator gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2043 VAA049_2044 VAA049_2044 VAA049_2044 2274469 2274990 - spermidine n1-acetyltransferase [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2044 VAA049_2045 VAA049_2045 VAA049_2045 2275213 2276334 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2045 VAA049_2046 VAA049_2046 VAA049_2046 2277007 2278188 + bacterial extracellular solute-binding family protein [G] COG2182 Maltose-binding periplasmic proteins/domains gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2046 VAA049_2047 VAA049_2047 VAA049_2047 2278263 2279837 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2047 VAA049_2048 VAA049_2048 VAA049_2048 2279849 2280739 + binding--dependent transport system inner membrane component family protein [G] COG3833 ABC-type maltose transport systems%2C permease component gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2048 VAA049_2049 VAA049_2049 VAA049_2049 2281062 2281313 - hypothetical protein conserved hypothetical protein gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2049 VAA049_205 VAA049_205 pulA pulA 220973 224578 - alpha-1%2C6-glucosidase%2C pullulanase-type domain protein pullul_strch: alpha-1%2C6-glucosidases%2C pullulanase-type domain protein~[G] COG1523 Type II secretory pathway%2C pullulanase PulA and related glycosidases gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_205 VAA049_2050 VAA049_2050 VAA049_2050 2281424 2281912 - thioesterase superfamily protein [I] COG1607 Acyl-CoA hydrolase gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2050 VAA049_2051 VAA049_2051 VAA049_2051 2282076 2282837 - deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2051 VAA049_2052 VAA049_2052 VAA049_2052 2282989 2283915 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2052 VAA049_2053 VAA049_2053 VAA049_2053 2284073 2284972 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2053 VAA049_2054 VAA049_2054 VAA049_2054 2285852 2286787 - zinc carboxypeptidase family protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2054 VAA049_2055 VAA049_2055 VAA049_2055 2285138 2285863 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2055 VAA049_2056 VAA049_2056 VAA049_2056 2287002 2287274 - hypothetical protein conserved hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2056 VAA049_2057 VAA049_2057 VAA049_2057 2287929 2288141 - 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2057 VAA049_2058 VAA049_2058 VAA049_2058 2288391 2288480 + hypothetical protein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2058 VAA049_2059 VAA049_2059 VAA049_2059 2288490 2289872 + HDIG domain protein HDIG: HDIG domain protein~[T] COG2206 HD-GYP domain gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2059 VAA049_206 VAA049_206 VAA049_206 224972 226279 - transporter%2C anaerobic C4-dicarboxylate uptake family protein dcu: transporter%2C anaerobic C4-dicarboxylate uptake family protein~[R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_206 VAA049_2060 VAA049_2060 VAA049_2060 2289985 2290920 + hypothetical protein conserved hypothetical protein~[S] COG2354 Uncharacterized protein conserved in bacteria gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2060 VAA049_2061 VAA049_2061 rumB rumB 2291034 2292161 + 23S rRNA (uracil-5-)-methyltransferase RumB meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2061 VAA049_2062 VAA049_2062 VAA049_2062 2292228 2292737 - hypothetical protein conserved hypothetical protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2062 VAA049_2063 VAA049_2063 VAA049_2063 2292734 2293084 - hypothetical protein conserved hypothetical protein~[S] COG3152 Predicted membrane protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2063 VAA049_2064 VAA049_2064 VAA049_2064 2293249 2294292 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2064 VAA049_2065 VAA049_2065 pyrC pyrC 2294356 2295384 - dihydroorotase%2C homodimeric type pyrC_dimer: dihydroorotase%2C homodimeric type~[F] COG0418 Dihydroorotase gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2065 VAA049_2066 VAA049_2066 VAA049_2066 2295947 2297764 + MOSC domain protein [R] COG3217 Uncharacterized Fe-S protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2066 VAA049_2067 VAA049_2067 VAA049_2067 2297827 2299701 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2067 VAA049_2068 VAA049_2068 VAA049_2068 2299848 2300456 - putative araC-type DNA-binding domain-containing protein gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2068 VAA049_2069 VAA049_2069 VAA049_2069 2300634 2301740 + acyltransferase family protein gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2069 VAA049_207 VAA049_207 aspA aspA 226407 227858 - aspartate ammonia-lyase aspA: aspartate ammonia-lyase~[E] COG1027 Aspartate ammonia-lyase gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_207 VAA049_2070 VAA049_2070 VAA049_2070 2301801 2302397 - putative leucine-rich repeat protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2070 VAA049_2071 VAA049_2071 VAA049_2071 2302603 2302905 - hypothetical protein conserved hypothetical protein~[S] COG3691 Uncharacterized protein conserved in bacteria gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2071 VAA049_2072 VAA049_2072 VAA049_2072 2303428 2303889 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2072 VAA049_2073 VAA049_2073 hmuV hmuV 2304023 2304802 - hemin import ATP-binding protein HmuV [P] COG4559 ABC-type hemin transport system%2C ATPase component gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2073 VAA049_2074 VAA049_2074 VAA049_2074 2304802 2305833 - fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2074 VAA049_2075 VAA049_2075 VAA049_2075 2305845 2306678 - periplasmic binding family protein [P] COG4558 ABC-type hemin transport system%2C periplasmic component gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2075 VAA049_2076 VAA049_2076 VAA049_2076 2306689 2307105 - biopolymer transport ExbD/TolR family protein [U] COG0848 Biopolymer transport protein gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2076 VAA049_2077 VAA049_2077 VAA049_2077 2307102 2307788 - motA/TolQ/ExbB proton channel family protein [U] COG0811 Biopolymer transport proteins gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2077 VAA049_2078 VAA049_2078 VAA049_2078 2307788 2308522 - hypothetical protein tonB_Cterm: TonB family C-terminal domain protein~[M] COG0810 Periplasmic protein TonB%2C links inner and outer membranes gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2078 VAA049_2079 VAA049_2079 hutW hutW 2308800 2310161 + putative heme utilization radical SAM enzyme HutW rSAM_HutW: putative heme utilization radical SAM enzyme HutW~[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2079 VAA049_208 VAA049_208 VAA049_208 228103 229041 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_208 VAA049_2080 VAA049_2080 VAA049_2080 2310185 2310688 + hemin-degrading HemS.ChuX domain protein [P] COG3721 Putative heme iron utilization protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2080 VAA049_2081 VAA049_2081 hutZ hutZ 2310713 2311243 + heme utilization protein HutZ heme_HutZ: heme utilization protein HutZ~[P] COG0748 Putative heme iron utilization protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2081 VAA049_2082 VAA049_2082 VAA049_2082 2311545 2313281 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2082 VAA049_2083 VAA049_2083 VAA049_2083 2313422 2314561 + sugar diacid recognition family protein [KT] COG3835 Sugar diacid utilization regulator gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2083 VAA049_2084 VAA049_2084 VAA049_2084 2314720 2316072 + gntP permease family protein [GE] COG2610 H+/gluconate symporter and related permeases gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2084 VAA049_2085 VAA049_2085 VAA049_2085 2316091 2317224 + glycerate kinase family protein [G] COG1929 Glycerate kinase gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2085 VAA049_2086 VAA049_2086 VAA049_2086 2317360 2318196 + hypothetical protein conserved hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2086 VAA049_2087 VAA049_2087 VAA049_2087 2318229 2318795 - DSBA-like thioredoxin domain protein [O] COG3531 Predicted protein-disulfide isomerase gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2087 VAA049_2088 VAA049_2088 VAA049_2088 2318852 2319715 - metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2088 VAA049_2089 VAA049_2089 VAA049_2089 2320034 2320174 - hypothetical protein conserved hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2089 VAA049_209 VAA049_209 VAA049_209 229133 229618 + fxsA cytoplasmic membrane family protein [R] COG3030 Protein affecting phage T7 exclusion by the F plasmid gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_209 VAA049_2090 VAA049_2090 gnd gnd 2320327 2321775 - 6-phosphogluconate dehydrogenase gnd: 6-phosphogluconate dehydrogenase~[G] COG0362 6-phosphogluconate dehydrogenase gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2090 VAA049_2091 VAA049_2091 VAA049_2091 2321789 2322505 - devB protein [G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2091 VAA049_2092 VAA049_2092 zwf zwf 2322502 2324004 - glucose-6-phosphate dehydrogenase zwf: glucose-6-phosphate dehydrogenase~[G] COG0364 Glucose-6-phosphate 1-dehydrogenase gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2092 VAA049_2093 VAA049_2093 VAA049_2093 2324351 2327239 - GAF domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2093 VAA049_2094 VAA049_2094 VAA049_2094 2327464 2328210 + PHP domain protein [ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2094 VAA049_2095 VAA049_2095 VAA049_2095 2328287 2328670 + cytochrome b562 family protein [C] COG3783 Soluble cytochrome b562 gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2095 VAA049_2096 VAA049_2096 VAA049_2096 2328827 2329174 + hypothetical protein conserved hypothetical protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2096 VAA049_2097 VAA049_2097 VAA049_2097 2329284 2330696 + pepSY-associated TM helix family protein [S] COG3182 Uncharacterized iron-regulated membrane protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2097 VAA049_2098 VAA049_2098 VAA049_2098 2330774 2331157 - glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2098 VAA049_2099 VAA049_2099 VAA049_2099 2331151 2332089 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2099 VAA049_21 VAA049_21 VAA049_21 22732 24255 + sigma-54 interaction domain protein [O] COG0606 Predicted ATPase with chaperone activity gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_21 VAA049_210 VAA049_210 trmL trmL 229652 230128 - tRNA (cytidine(34)-2'-O)-methyltransferase tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase~[J] COG0219 Predicted rRNA methylase (SpoU class) gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_210 VAA049_2100 VAA049_2100 VAA049_2100 2332236 2333504 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein~[E] COG2873 O-acetylhomoserine sulfhydrylase gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2100 VAA049_2101 VAA049_2101 kbl kbl 2333859 2335052 + glycine C-acetyltransferase 2am3keto_CoA: glycine C-acetyltransferase~[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2101 VAA049_2102 VAA049_2102 tdh tdh 2335055 2336086 + L-threonine 3-dehydrogenase tdh: L-threonine 3-dehydrogenase~[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2102 VAA049_2103 VAA049_2103 VAA049_2103 2337172 2338233 - hypothetical protein conserved hypothetical protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2103 VAA049_2104 VAA049_2104 VAA049_2104 2338284 2339393 - hemolytic enterotoxin family protein gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2104 VAA049_2105 VAA049_2105 VAA049_2105 2339406 2340470 - hypothetical protein conserved hypothetical protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2105 VAA049_2106 VAA049_2106 VAA049_2106 2340482 2340877 - hypothetical protein conserved hypothetical protein gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2106 VAA049_2107 VAA049_2107 VAA049_2107 2340902 2341282 - hypothetical protein conserved hypothetical protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2107 VAA049_2108 VAA049_2108 VAA049_2108 2341962 2342138 - hypothetical protein gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2108 VAA049_2109 VAA049_2109 VAA049_2109 2342341 2343057 + transposase DDE domain protein gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2109 VAA049_211 VAA049_211 VAA049_211 230181 230798 - iron/manganese superoxide dismutase%2C alpha-hairpin domain protein [P] COG0605 Superoxide dismutase gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_211 VAA049_2110 VAA049_2110 VAA049_2110 2343242 2344627 + transposase Tn5 dimerization domain protein gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2110 VAA049_2111 VAA049_2111 VAA049_2111 2344919 2345995 - linear amide C-N hydrolase%2C choloylglycine hydrolase family protein [M] COG3049 Penicillin V acylase and related amidases gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2111 VAA049_2112 VAA049_2112 dsdC dsdC 2346296 2347240 - D-serine deaminase transcriptional activator dsdC: D-serine deaminase transcriptional activator~[K] COG0583 Transcriptional regulator gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2112 VAA049_2113 VAA049_2113 dsdA dsdA 2347451 2348773 + D-serine ammonia-lyase D_Ser_am_lyase: D-serine ammonia-lyase~[E] COG3048 D-serine dehydratase gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2113 VAA049_2114 VAA049_2114 VAA049_2114 2348990 2349193 - hypothetical protein conserved hypothetical protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2114 VAA049_2115 VAA049_2115 VAA049_2115 2349903 2350004 - cyd operon protein YbgT cyd_oper_ybgT: cyd operon protein YbgT gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2115 VAA049_2116 VAA049_2116 cydB cydB 2350015 2351151 - cytochrome d ubiquinol oxidase%2C subunit II cydB: cytochrome d ubiquinol oxidase%2C subunit II~[C] COG1294 Cytochrome bd-type quinol oxidase%2C subunit 2 gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2116 VAA049_2117 VAA049_2117 VAA049_2117 2351164 2352744 - bacterial Cytochrome Ubiquinol Oxidase family protein [C] COG1271 Cytochrome bd-type quinol oxidase%2C subunit 1 gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2117 VAA049_2118 VAA049_2118 VAA049_2118 2352885 2354303 - aminotransferase class I and II family protein [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2118 VAA049_2119 VAA049_2119 VAA049_2119 2354541 2355491 - D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2119 VAA049_212 VAA049_212 VAA049_212 230930 232324 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_212 VAA049_2120 VAA049_2120 VAA049_2120 2355738 2355902 - hypothetical protein conserved hypothetical protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2120 VAA049_2121 VAA049_2121 VAA049_2121 2355968 2356204 - hypothetical protein conserved hypothetical protein gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2121 VAA049_2122 VAA049_2122 VAA049_2122 2356445 2357098 + oprF membrane domain protein [M] COG3047 Outer membrane protein W gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2122 VAA049_2123 VAA049_2123 hap hap 2357519 2359348 + hemagglutinin/proteinase [E] COG3227 Zinc metalloprotease (elastase) gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2123 VAA049_2124 VAA049_2124 VAA049_2124 2359458 2360738 - sensory box protein [T] COG2202 FOG: PAS/PAC domain gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2124 VAA049_2125 VAA049_2125 VAA049_2125 2361217 2363607 - extracellular lipase%2C Pla-1/cef family protein lipase_Pla1_cef: extracellular lipase%2C Pla-1/cef family protein~[R] COG1073 Hydrolases of the alpha/beta superfamily gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2125 VAA049_2126 VAA049_2126 VAA049_2126 2363623 2364861 - outer membrane beta-barrel domain protein [I] COG2067 Long-chain fatty acid transport protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2126 VAA049_2127 VAA049_2127 VAA049_2127 2365396 2367468 - alpha amylase%2C catalytic domain protein [G] COG0366 Glycosidases gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2127 VAA049_2128 VAA049_2128 VAA049_2128 2367760 2368683 + aldo/keto reductase family protein [R] COG4989 Predicted oxidoreductase gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2128 VAA049_2129 VAA049_2129 VAA049_2129 2369098 2378883 + hypothetical protein T1SS_VCA0849: type I secretion C-terminal target domain protein~[Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2129 VAA049_213 VAA049_213 VAA049_213 232324 233010 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_213 VAA049_2130 VAA049_2130 VAA049_2130 2379014 2379994 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2130 VAA049_2131 VAA049_2131 VAA049_2131 2380037 2381281 - amino acid permease family protein [E] COG0531 Amino acid transporters gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2131 VAA049_2132 VAA049_2132 VAA049_2132 2381467 2382081 + lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2132 VAA049_2133 VAA049_2133 VAA049_2133 2382130 2382354 - hypothetical protein conserved hypothetical protein gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2133 VAA049_2134 VAA049_2134 gap gap 2382655 2384091 - glyceraldehyde-3-phosphate dehydrogenase%2C type I GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase%2C type I~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2134 VAA049_2135 VAA049_2135 VAA049_2135 2384840 2385325 - cytidine and deoxycytidylate deaminase zinc-binding region family protein [F] COG2131 Deoxycytidylate deaminase gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2135 VAA049_2136 VAA049_2136 VAA049_2136 2386218 2386622 + osmC-like family protein [O] COG1765 Predicted redox protein%2C regulator of disulfide bond formation gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2136 VAA049_2137 VAA049_2137 VAA049_2137 2386777 2388090 + CBS domain protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2137 VAA049_2138 VAA049_2138 VAA049_2138 2388234 2388806 + hexapeptide-repeat containing-acetyltransferase [R] COG0110 Acetyltransferase (isoleucine patch superfamily) gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2138 VAA049_2139 VAA049_2139 VAA049_2139 2388883 2389830 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2139 VAA049_214 VAA049_214 VAA049_214 233198 233701 + LTXXQ motif family protein [UNTP] COG3678 P pilus assembly/Cpx signaling pathway%2C periplasmic inhibitor/zinc-resistance associated protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_214 VAA049_2140 VAA049_2140 VAA049_2140 2389862 2390758 - cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG3965 Predicted Co/Zn/Cd cation transporters gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2140 VAA049_2141 VAA049_2141 VAA049_2141 2390952 2391830 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2141 VAA049_2142 VAA049_2142 VAA049_2142 2392026 2392604 + methyltransferase small domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2142 VAA049_2143 VAA049_2143 VAA049_2143 2392908 2393096 - hypothetical protein conserved hypothetical protein gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2143 VAA049_2144 VAA049_2144 VAA049_2144 2393104 2394021 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2144 VAA049_2145 VAA049_2145 VAA049_2145 2394152 2396131 - acetoacetate-CoA ligase ac_ac_CoA_syn: acetoacetate-CoA ligase~[I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2145 VAA049_2146 VAA049_2146 phhA phhA 2396365 2397159 + phenylalanine-4-hydroxylase phe4hydrox_mono: phenylalanine-4-hydroxylase~[E] COG3186 Phenylalanine-4-hydroxylase gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2146 VAA049_2147 VAA049_2147 VAA049_2147 2397149 2397478 + pterin 4 alpha carbinolamine dehydratase family protein [H] COG2154 Pterin-4a-carbinolamine dehydratase gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2147 VAA049_2148 VAA049_2148 ectA ectA 2398158 2398700 + diaminobutyrate acetyltransferase ectoine_EctA: diaminobutyrate acetyltransferase~[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2148 VAA049_2149 VAA049_2149 ectB ectB 2398724 2399989 + diaminobutyrate--2-oxoglutarate aminotransferase ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase~[E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2149 VAA049_215 VAA049_215 VAA049_215 233902 234807 + cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG0053 Predicted Co/Zn/Cd cation transporters gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_215 VAA049_2150 VAA049_2150 VAA049_2150 2400025 2400441 + ectoine synthase family protein gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2150 VAA049_2151 VAA049_2151 VAA049_2151 2400441 2401862 + amino acid kinase family protein [E] COG0527 Aspartokinases gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2151 VAA049_2152 VAA049_2152 VAA049_2152 2401943 2402149 - hypothetical protein conserved hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2152 VAA049_2153 VAA049_2153 groL groL 2402182 2403774 - chaperonin GroL groEL: chaperonin GroL~[O] COG0459 Chaperonin GroEL (HSP60 family) gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2153 VAA049_2154 VAA049_2154 groS groS 2403803 2404093 - 10 kDa chaperonin [O] COG0234 Co-chaperonin GroES (HSP10) gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2154 VAA049_2155 VAA049_2155 VAA049_2155 2404295 2405641 - magnesium transporter%2C putative [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2155 VAA049_2156 VAA049_2156 VAA049_2156 2405644 2406204 - mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2156 VAA049_2157 VAA049_2157 speA speA 2406651 2408561 + arginine decarboxylase speA: arginine decarboxylase~[E] COG1166 Arginine decarboxylase (spermidine biosynthesis) gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2157 VAA049_2158 VAA049_2158 speB speB 2408562 2409491 + agmatinase agmatinase: agmatinase~[E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase%2C arginase family gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2158 VAA049_2159 VAA049_2159 VAA049_2159 2409679 2411184 - bacterial leucyl aminopeptidase [R] COG2234 Predicted aminopeptidases gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2159 VAA049_216 VAA049_216 pfkA pfkA 235070 236032 + 6-phosphofructokinase PFKA_ATP: 6-phosphofructokinase~[G] COG0205 6-phosphofructokinase gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_216 VAA049_2160 VAA049_2160 VAA049_2160 2411219 2412646 - hypothetical protein bacterial pre-peptidase C-terminal domain protein~[E] COG3227 Zinc metalloprotease (elastase) gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2160 VAA049_2161 VAA049_2161 VAA049_2161 2412967 2414424 - chitin binding domain protein [S] COG3397 Uncharacterized protein conserved in bacteria gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2161 VAA049_2162 VAA049_2162 VAA049_2162 2414918 2416468 + FAD binding domain of DNA photolyase family protein [R] COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2162 VAA049_2163 VAA049_2163 VAA049_2163 2416763 2417434 + maoC like domain protein [I] COG2030 Acyl dehydratase gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2163 VAA049_2164 VAA049_2164 VAA049_2164 2417580 2418416 - ABC transporter%2C periplasmic substrate-binding protein [P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2164 VAA049_2165 VAA049_2165 VAA049_2165 2418624 2418977 + hypothetical protein conserved hypothetical protein gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2165 VAA049_2166 VAA049_2166 rnb rnb 2419072 2421108 - exoribonuclease II RNase_B: exoribonuclease II~[K] COG4776 Exoribonuclease II gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2166 VAA049_2167 VAA049_2167 VAA049_2167 2421482 2423413 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2167 VAA049_2168 VAA049_2168 VAA049_2168 2423557 2424549 + trypsin family protein [O] COG5640 Secreted trypsin-like serine protease gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2168 VAA049_2169 VAA049_2169 VAA049_2169 2424640 2426604 + type I phosphodiesterase / nucleotide pyrophosphatase family protein [M] COG1368 Phosphoglycerol transferase and related proteins%2C alkaline phosphatase superfamily gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2169 VAA049_217 VAA049_217 glpX glpX 236119 237126 - fructose-1%2C6-bisphosphatase%2C class II glpX: fructose-1%2C6-bisphosphatase%2C class II~[G] COG1494 Fructose-1%2C6-bisphosphatase/sedoheptulose 1%2C7-bisphosphatase and related proteins gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_217 VAA049_2170 VAA049_2170 VAA049_2170 2426699 2428003 - pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2170 VAA049_2171 VAA049_2171 VAA049_2171 2428122 2428604 - creA family protein [S] COG3045 Uncharacterized protein conserved in bacteria gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2171 VAA049_2172 VAA049_2172 VAA049_2172 2428926 2429432 + hypothetical protein conserved hypothetical protein gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2172 VAA049_2173 VAA049_2173 VAA049_2173 2429571 2430251 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2173 VAA049_2174 VAA049_2174 VAA049_2174 2430447 2430668 - putative transcription initiation factor TFIIIB Brf1 subunit/Transcription initiation factor TFIIB gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2174 VAA049_2175 VAA049_2175 VAA049_2175 2430721 2430849 - hypothetical protein gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2175 VAA049_2176 VAA049_2176 VAA049_2176 2430932 2431519 - hypothetical protein conserved hypothetical protein~[S] COG3647 Predicted membrane protein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2176 VAA049_2177 VAA049_2177 VAA049_2177 2431755 2432384 + dnaJ domain protein [O] COG2214 DnaJ-class molecular chaperone gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2177 VAA049_2178 VAA049_2178 VAA049_2178 2432542 2434191 - putative ATPase of the ABC class family protein [R] COG3044 Predicted ATPase of the ABC class gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2178 VAA049_2179 VAA049_2179 VAA049_2179 2434317 2436200 - GAF domain protein [T] COG2200 FOG: EAL domain gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2179 VAA049_218 VAA049_218 VAA049_218 237447 237689 + hypothetical protein conserved hypothetical protein~[S] COG3074 Uncharacterized protein conserved in bacteria gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_218 VAA049_2180 VAA049_2180 VAA049_2180 2436369 2437577 - NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein [S] COG3007 Uncharacterized paraquat-inducible protein B gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2180 VAA049_2181 VAA049_2181 VAA049_2181 2437667 2438164 - arylesterase [E] COG2755 Lysophospholipase L1 and related esterases gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2181 VAA049_2182 VAA049_2182 VAA049_2182 2438265 2438942 + ABC transporter family protein [Q] COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis%2C ATPase component gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2182 VAA049_2183 VAA049_2183 VAA049_2183 2438939 2441386 + ftsX-like permease family protein [Q] COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis%2C permease component gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2183 VAA049_2184 VAA049_2184 VAA049_2184 2441775 2442941 + nucleotide sugar dehydrogenase family protein NDP-sugDHase: nucleotide sugar dehydrogenase family protein~[M] COG1004 Predicted UDP-glucose 6-dehydrogenase gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2184 VAA049_2185 VAA049_2185 VAA049_2185 2443050 2444483 + pyridine nucleotide-disulfide oxidoreductase family protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2185 VAA049_2186 VAA049_2186 VAA049_2186 2444535 2445464 - hypothetical protein conserved hypothetical protein~[E] COG1984 Allophanate hydrolase subunit 2 gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2186 VAA049_2187 VAA049_2187 VAA049_2187 2445583 2446293 - allophanate hydrolase subunit 1 family protein [E] COG2049 Allophanate hydrolase subunit 1 gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2187 VAA049_2188 VAA049_2188 VAA049_2188 2446297 2447037 - lamB/YcsF family protein [R] COG1540 Uncharacterized proteins%2C homologs of lactam utilization protein B gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2188 VAA049_2189 VAA049_2189 galE galE 2447358 2448374 + UDP-glucose 4-epimerase GalE galE: UDP-glucose 4-epimerase GalE~[M] COG1087 UDP-glucose 4-epimerase gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2189 VAA049_219 VAA049_219 metF metF 237752 238639 - methylenetetrahydrofolate reductase [NAD(P)H] fadh2: methylenetetrahydrofolate reductase [NAD(P)H]~[E] COG0685 5%2C10-methylenetetrahydrofolate reductase gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_219 VAA049_2190 VAA049_2190 VAA049_2190 2448465 2449886 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2190 VAA049_2191 VAA049_2191 VAA049_2191 2450114 2451316 - aromatic amino acid transport family protein araaP: aromatic amino acid transport family protein~[E] COG0814 Amino acid permeases gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2191 VAA049_2192 VAA049_2192 VAA049_2192 2451680 2451799 + hypothetical protein conserved hypothetical protein gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2192 VAA049_2193 VAA049_2193 VAA049_2193 2451836 2452417 + hypothetical protein conserved hypothetical protein~[S] COG3124 Uncharacterized protein conserved in bacteria gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2193 VAA049_2194 VAA049_2194 VAA049_2194 2452454 2453722 + hypothetical protein SNF2 family N-terminal domain protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2194 VAA049_2195 VAA049_2195 VAA049_2195 2453823 2454557 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2195 VAA049_2196 VAA049_2196 VAA049_2196 2454661 2454969 - cytochrome c family protein [C] COG2863 Cytochrome c553 gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2196 VAA049_2197 VAA049_2197 VAA049_2197 2455097 2456104 - beta-eliminating lyase family protein [E] COG2008 Threonine aldolase gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2197 VAA049_2198 VAA049_2198 VAA049_2198 2456113 2456628 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2198 VAA049_2199 VAA049_2199 VAA049_2199 2456981 2458639 + AAA domain family protein [R] COG0714 MoxR-like ATPases gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2199 VAA049_22 VAA049_22 VAA049_22 24345 25229 + acyltransferase family protein [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_22 VAA049_220 VAA049_220 VAA049_220 238926 241337 - aspartate kinase domain protein asp_kinase: aspartate kinase domain protein~[E] COG0460 Homoserine dehydrogenase gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_220 VAA049_2200 VAA049_2200 VAA049_2200 2458648 2460093 + VWA domain containing CoxE-like family protein [R] COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2200 VAA049_2201 VAA049_2201 VAA049_2201 2460317 2460390 + tRNA-Cys tRNA gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2201 VAA049_2202 VAA049_2202 VAA049_2202 2460671 2461414 + ABC transporter family protein [E] COG4161 ABC-type arginine transport system%2C ATPase component gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2202 VAA049_2203 VAA049_2203 VAA049_2203 2461488 2462219 + lysine-arginine-ornithine-binding periplasmic family protein 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2203 VAA049_2204 VAA049_2204 VAA049_2204 2462221 2462910 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4215 ABC-type arginine transport system%2C permease component gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2204 VAA049_2205 VAA049_2205 VAA049_2205 2462907 2463575 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4160 ABC-type arginine/histidine transport system%2C permease component gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2205 VAA049_2206 VAA049_2206 VAA049_2206 2463628 2464533 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2206 VAA049_2207 VAA049_2207 VAA049_2207 2464708 2465208 + glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2207 VAA049_2208 VAA049_2208 VAA049_2208 2465426 2465512 + tRNA-Leu tRNA gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2208 VAA049_2209 VAA049_2209 VAA049_2209 2465536 2465609 + tRNA-Cys tRNA gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2209 VAA049_221 VAA049_221 metB metB 241350 242516 - O-succinylhomoserine (thiol)-lyase O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_221 VAA049_2210 VAA049_2210 VAA049_2210 2465642 2466430 - lipase family protein [I] COG3675 Predicted lipase gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2210 VAA049_2211 VAA049_2211 VAA049_2211 2466557 2467711 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2211 VAA049_2212 VAA049_2212 trxA trxA 2467900 2468334 - thioredoxin thioredoxin: thioredoxin~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2212 VAA049_2213 VAA049_2213 fabH fabH 2468495 2469583 + 3-oxoacyl-[acyl-carrier-] synthase III family protein fabH: 3-oxoacyl-[acyl-carrier-] synthase III family protein~[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2213 VAA049_2214 VAA049_2214 glpC glpC 2469724 2470965 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit~[C] COG0247 Fe-S oxidoreductase gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2214 VAA049_2215 VAA049_2215 glpB glpB 2470962 2472272 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit~[E] COG3075 Anaerobic glycerol-3-phosphate dehydrogenase gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2215 VAA049_2216 VAA049_2216 glpA glpA 2472269 2473912 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit~[C] COG0578 Glycerol-3-phosphate dehydrogenase gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2216 VAA049_2217 VAA049_2217 VAA049_2217 2474567 2475463 + major intrinsic family protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2217 VAA049_2218 VAA049_2218 VAA049_2218 2478046 2478711 - pilZ domain protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2218 VAA049_2219 VAA049_2219 luxQ luxQ 2475481 2478054 + autoinducer 2 sensor kinase/phosphatase luxQ [T] COG0642 Signal transduction histidine kinase gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2219 VAA049_222 VAA049_222 VAA049_222 242784 243101 + met Apo-repressor%2C MetJ family protein [KE] COG3060 Transcriptional regulator of met regulon gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_222 VAA049_2220 VAA049_2220 VAA049_2220 2478914 2479432 - hypothetical protein conserved hypothetical protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2220 VAA049_2221 VAA049_2221 VAA049_2221 2479670 2480068 - bacterial OB fold family protein [S] COG3111 Uncharacterized conserved protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2221 VAA049_2222 VAA049_2222 VAA049_2222 2480270 2480575 + hypothetical protein conserved hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2222 VAA049_2223 VAA049_2223 VAA049_2223 2480875 2483541 + PHP-associated family protein gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2223 VAA049_2224 VAA049_2224 cobQ cobQ 2484315 2485769 + cobyric acid synthase CobQ cobQ: cobyric acid synthase CobQ~[H] COG1492 Cobyric acid synthase gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2224 VAA049_2225 VAA049_2225 modA modA 2485781 2486539 + molybdate ABC transporter%2C periplasmic molybdate-binding protein modA: molybdate ABC transporter%2C periplasmic molybdate-binding protein~[P] COG0725 ABC-type molybdate transport system%2C periplasmic component gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2225 VAA049_2226 VAA049_2226 modB modB 2486543 2487238 + molybdate ABC transporter%2C permease protein modB_ABC: molybdate ABC transporter%2C permease protein~[P] COG4149 ABC-type molybdate transport system%2C permease component gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2226 VAA049_2227 VAA049_2227 modC modC 2487252 2488352 + molybdate ABC transporter%2C ATP-binding protein modC_ABC: molybdate ABC transporter%2C ATP-binding protein~[P] COG4148 ABC-type molybdate transport system%2C ATPase component gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2227 VAA049_2228 VAA049_2228 VAA049_2228 2488449 2489558 - hydroxymethylglutaryl-coenzyme A reductase family protein [I] COG1257 Hydroxymethylglutaryl-CoA reductase gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2228 VAA049_2229 VAA049_2229 VAA049_2229 2489789 2490079 - hypothetical protein conserved hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2229 VAA049_223 VAA049_223 VAA049_223 243212 244489 - malic enzyme%2C NAD binding domain protein [C] COG0281 Malic enzyme gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_223 VAA049_2230 VAA049_2230 VAA049_2230 2490136 2490360 - hypothetical protein conserved hypothetical protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2230 VAA049_2231 VAA049_2231 VAA049_2231 2490605 2491150 + heme NO binding family protein gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2231 VAA049_2232 VAA049_2232 VAA049_2232 2491147 2492094 + his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2232 VAA049_2233 VAA049_2233 VAA049_2233 2492104 2494269 - integral membrane%2C YccS/YhfK family protein YCCS_YHJK: integral membrane%2C YccS/YhfK family protein~[S] COG1289 Predicted membrane protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2233 VAA049_2234 VAA049_2234 VAA049_2234 2494468 2496531 + hypothetical protein uvrD/REP helicase N-terminal domain protein~[L] COG0210 Superfamily I DNA and RNA helicases gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2234 VAA049_2235 VAA049_2235 VAA049_2235 2496587 2497123 - prokaryotic cytochrome b561 family protein [C] COG3658 Cytochrome b gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2235 VAA049_2236 VAA049_2236 VAA049_2236 2497116 2497400 - peptidase propeptide and YPEB domain protein [S] COG5591 Uncharacterized conserved protein gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2236 VAA049_2237 VAA049_2237 VAA049_2237 2497573 2497929 - prokaryotic diacylglycerol kinase family protein [M] COG0818 Diacylglycerol kinase gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2237 VAA049_2238 VAA049_2238 VAA049_2238 2498234 2498854 + isochorismatase family protein [Q] COG1335 Amidases related to nicotinamidase gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2238 VAA049_2239 VAA049_2239 mgsA mgsA 2498923 2499378 - methylglyoxal synthase MGSA: methylglyoxal synthase~[G] COG1803 Methylglyoxal synthase gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2239 VAA049_224 VAA049_224 rpmE rpmE 244797 245015 - ribosomal protein L31 L31: ribosomal protein L31~[J] COG0254 Ribosomal protein L31 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_224 VAA049_2240 VAA049_2240 torT torT 2499433 2500425 - TMAO reductase system periplasmic protein TorT TMAO_TorT: TMAO reductase system periplasmic protein TorT~[G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2240 VAA049_2241 VAA049_2241 torS torS 2500513 2503467 + TMAO reductase sytem sensor TorS TMAO_torS: TMAO reductase sytem sensor TorS~[T] COG0642 Signal transduction histidine kinase gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2241 VAA049_2242 VAA049_2242 pyk pyk 2503587 2505047 - pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2242 VAA049_2243 VAA049_2243 VAA049_2243 2505169 2506548 - major Facilitator Superfamily protein [G] COG2271 Sugar phosphate permease gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2243 VAA049_2244 VAA049_2244 VAA049_2244 2506648 2506794 + hypothetical protein conserved hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2244 VAA049_2245 VAA049_2245 VAA049_2245 2506825 2508117 + bacterial extracellular solute-binding family protein [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2245 VAA049_2246 VAA049_2246 VAA049_2246 2508114 2510483 + HAMP domain protein [T] COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2246 VAA049_2247 VAA049_2247 VAA049_2247 2511717 2512334 - yhhN-like family protein [S] COG3714 Predicted membrane protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2247 VAA049_2248 VAA049_2248 VAA049_2248 2510458 2511720 + bacterial regulatory%2C Fis family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2248 VAA049_2249 VAA049_2249 VAA049_2249 2512473 2513621 - iron-containing alcohol dehydrogenase family protein [C] COG1979 Uncharacterized oxidoreductases%2C Fe-dependent alcohol dehydrogenase family gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2249 VAA049_225 VAA049_225 priA priA 245270 247474 + primosomal protein N' priA: primosomal protein N'~[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_225 VAA049_2250 VAA049_2250 endo I endo I 2514294 2517449 + chitodextrinase [R] COG3979 Uncharacterized protein contain chitin-binding domain type 3 gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2250 VAA049_2251 VAA049_2251 glgC glgC 2517716 2518939 - glucose-1-phosphate adenylyltransferase glgC: glucose-1-phosphate adenylyltransferase~[G] COG0448 ADP-glucose pyrophosphorylase gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2251 VAA049_2252 VAA049_2252 VAA049_2252 2519242 2521125 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2252 VAA049_2253 VAA049_2253 VAA049_2253 2521529 2522200 + bacterial SH3 domain protein gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2253 VAA049_2254 VAA049_2254 VAA049_2254 2522277 2522732 + hypothetical protein conserved hypothetical protein gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2254 VAA049_2255 VAA049_2255 secD secD 2522804 2524642 + export membrane protein SecD secD: -export membrane protein SecD~[U] COG0342 Preprotein translocase subunit SecD gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2255 VAA049_2256 VAA049_2256 secF secF 2524646 2525548 + export membrane protein SecF 3a0501s07: -export membrane protein SecF~[U] COG0341 Preprotein translocase subunit SecF gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2256 VAA049_2257 VAA049_2257 phbB phbB 2526219 2526959 + acetoacetyl-CoA reductase family protein acAcCoA_reduct: acetoacetyl-CoA reductase family protein~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2257 VAA049_2258 VAA049_2258 VAA049_2258 2526972 2528177 + acetyl-CoA C-acyltransferase family protein acCoA-C-Actrans: acetyl-CoA C-acyltransferase family protein~[I] COG0183 Acetyl-CoA acetyltransferase gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2258 VAA049_2259 VAA049_2259 VAA049_2259 2528207 2528554 + phasin family protein phasin_3: phasin family protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2259 VAA049_226 VAA049_226 VAA049_226 247780 248787 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_226 VAA049_2260 VAA049_2260 phaC phaC 2528612 2530387 + poly(R)-hydroxyalkanoic acid synthase%2C class I family protein PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase%2C class I family protein~[I] COG3243 Poly(3-hydroxyalkanoate) synthetase gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2260 VAA049_2261 VAA049_2261 VAA049_2261 2530471 2531526 - ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2261 VAA049_2262 VAA049_2262 VAA049_2262 2531538 2533607 - binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2262 VAA049_2263 VAA049_2263 VAA049_2263 2533744 2534778 - bacterial extracellular solute-binding family protein [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2263 VAA049_2264 VAA049_2264 VAA049_2264 2534891 2536201 - phosphoglycerate transporter family protein 2A0104: phosphoglycerate transporter family protein~[G] COG2271 Sugar phosphate permease gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2264 VAA049_2265 VAA049_2265 VAA049_2265 2536269 2537852 - histidine kinase family protein [T] COG3851 Signal transduction histidine kinase%2C glucose-6-phosphate specific gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2265 VAA049_2266 VAA049_2266 VAA049_2266 2537855 2538481 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2266 VAA049_2267 VAA049_2267 VAA049_2267 2538667 2539935 + HDIG domain protein HDIG: HDIG domain protein~[T] COG2206 HD-GYP domain gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2267 VAA049_2268 VAA049_2268 VAA049_2268 2539979 2540107 - hypothetical protein conserved hypothetical protein gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2268 VAA049_2269 VAA049_2269 VAA049_2269 2540119 2540694 - periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family protein napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family protein~[C] COG3005 Nitrate/TMAO reductases%2C membrane-bound tetraheme cytochrome c subunit gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2269 VAA049_227 VAA049_227 ftsN ftsN 248958 249509 + cell division protein FtsN ftsN: cell division protein FtsN~[D] COG3087 Cell division protein gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_227 VAA049_2270 VAA049_2270 VAA049_2270 2540712 2541167 - nitrate reductase cytochrome c-type subunit family protein [C] COG3043 Nitrate reductase cytochrome c-type subunit gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2270 VAA049_2271 VAA049_2271 napA napA 2541234 2543723 - periplasmic nitrate reductase%2C large subunit NAPA: periplasmic nitrate reductase%2C large subunit~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2271 VAA049_2272 VAA049_2272 VAA049_2272 2543720 2544040 - napD family protein [P] COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2272 VAA049_2273 VAA049_2273 napF napF 2544067 2544561 - ferredoxin-type protein NapF napF: ferredoxin-type protein NapF~[C] COG1145 Ferredoxin gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2273 VAA049_2274 VAA049_2274 VAA049_2274 2544794 2546482 + HAMP domain protein [T] COG3850 Signal transduction histidine kinase%2C nitrate/nitrite-specific gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2274 VAA049_2275 VAA049_2275 VAA049_2275 2546472 2547095 + bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2275 VAA049_2276 VAA049_2276 VAA049_2276 2547311 2548681 + L-serine ammonia-lyase sda_mono: L-serine ammonia-lyase~[E] COG1760 L-serine deaminase gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2276 VAA049_2277 VAA049_2277 VAA049_2277 2548779 2550146 - transporter%2C anaerobic C4-dicarboxylate uptake C family protein dcuC: transporter%2C anaerobic C4-dicarboxylate uptake C family protein~[C] COG3069 C4-dicarboxylate transporter gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2277 VAA049_2278 VAA049_2278 VAA049_2278 2550538 2552301 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2278 VAA049_2279 VAA049_2279 VAA049_2279 2552481 2553086 + HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2279 VAA049_228 VAA049_228 hslV hslV 249646 250203 + ATP-dependent protease HslVU%2C peptidase subunit ATP_dep_HslV: ATP-dependent protease HslVU%2C peptidase subunit~[O] COG5405 ATP-dependent protease HslVU (ClpYQ)%2C peptidase subunit gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_228 VAA049_2280 VAA049_2280 VAA049_2280 2553167 2553640 - domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2280 VAA049_2281 VAA049_2281 VAA049_2281 2553862 2554476 + ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2281 VAA049_2282 VAA049_2282 VAA049_2282 2554710 2556272 + sensory box protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2282 VAA049_2283 VAA049_2283 VAA049_2283 2556380 2557918 - FAD dependent oxidoreductase family protein [C] COG0578 Glycerol-3-phosphate dehydrogenase gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2283 VAA049_2284 VAA049_2284 VAA049_2284 2558315 2559235 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2284 VAA049_2285 VAA049_2285 VAA049_2285 2559357 2561003 - sucrose-6-phosphate hydrolase family protein scrB_fam: sucrose-6-phosphate hydrolase family protein~[G] COG1621 Beta-fructosidases (levanase/invertase) gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2285 VAA049_2286 VAA049_2286 VAA049_2286 2561079 2562071 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2286 VAA049_2287 VAA049_2287 VAA049_2287 2562373 2563812 + PTS system%2C sucrose-specific IIBC component PTS-II-BC-sucr: PTS system%2C sucrose-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2287 VAA049_2288 VAA049_2288 VAA049_2288 2563978 2564415 - hypothetical protein conserved hypothetical protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2288 VAA049_2289 VAA049_2289 VAA049_2289 2564687 2565268 + hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2289 VAA049_229 VAA049_229 hslU hslU 250269 251600 + ATP-dependent protease HslVU%2C ATPase subunit hslU: ATP-dependent protease HslVU%2C ATPase subunit~[O] COG1220 ATP-dependent protease HslVU (ClpYQ)%2C ATPase subunit gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_229 VAA049_2290 VAA049_2290 VAA049_2290 2565265 2566401 + putative d-alanine-D-alanine ligase gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2290 VAA049_2291 VAA049_2291 VAA049_2291 2566490 2567032 + hypothetical protein conserved hypothetical protein gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2291 VAA049_2292 VAA049_2292 VAA049_2292 2567032 2567778 + hypothetical protein conserved hypothetical protein gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2292 VAA049_2293 VAA049_2293 VAA049_2293 2567789 2568235 + YHS domain protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2293 VAA049_2294 VAA049_2294 VAA049_2294 2568235 2569977 + acyltransferase family protein [R] COG3176 Putative hemolysin gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2294 VAA049_2295 VAA049_2295 VAA049_2295 2570093 2570473 + glyoxalase-like domain protein [R] COG3324 Predicted enzyme related to lactoylglutathione lyase gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2295 VAA049_2296 VAA049_2296 VAA049_2296 2570567 2572270 - pyridine nucleotide-disulfide oxidoreductase family protein [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2296 VAA049_2297 VAA049_2297 VAA049_2297 2572336 2572521 - hypothetical protein conserved hypothetical protein~[P] COG0607 Rhodanese-related sulfurtransferase gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2297 VAA049_2298 VAA049_2298 bigR bigR 2572676 2572993 + biofilm growth-associated repressor [K] COG0640 Predicted transcriptional regulators gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2298 VAA049_2299 VAA049_2299 VAA049_2299 2573010 2573429 + sulfur transport family protein [R] COG2391 Predicted transporter component gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2299 VAA049_23 VAA049_23 dsbA dsbA 25306 25908 - disulfide interchange protein DsbA thiol:disulfide interchange protein DsbA~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_23 VAA049_230 VAA049_230 menA menA 251704 252621 + 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase menA: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~[H] COG1575 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_230 VAA049_2300 VAA049_2300 VAA049_2300 2573440 2573898 + sulfur transport family protein [R] COG2391 Predicted transporter component gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2300 VAA049_2301 VAA049_2301 VAA049_2301 2574008 2575012 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2301 VAA049_2302 VAA049_2302 VAA049_2302 2575014 2578172 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2302 VAA049_2303 VAA049_2303 VAA049_2303 2578540 2579193 + nitroreductase family protein [C] COG0778 Nitroreductase gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2303 VAA049_2304 VAA049_2304 VAA049_2304 2579484 2580425 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2304 VAA049_2305 VAA049_2305 VAA049_2305 2579197 2579487 + antibiotic biosynthesis monooxygenase family protein [S] COG1359 Uncharacterized conserved protein gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2305 VAA049_2306 VAA049_2306 VAA049_2306 2580435 2581160 - hypothetical protein conserved hypothetical protein~[R] COG2384 Predicted SAM-dependent methyltransferase gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2306 VAA049_2307 VAA049_2307 VAA049_2307 2581352 2581702 + glpM family protein [R] COG3136 Uncharacterized membrane protein required for alginate biosynthesis gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2307 VAA049_2308 VAA049_2308 VAA049_2308 2581742 2582191 + NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2308 VAA049_2309 VAA049_2309 VAA049_2309 2582224 2582739 + acetyltransferase family protein [R] COG3981 Predicted acetyltransferase gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2309 VAA049_231 VAA049_231 rraA rraA 252696 253211 + regulator of ribonuclease activity A rraA_entero: regulator of ribonuclease activity A~[H] COG0684 Demethylmenaquinone methyltransferase gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_231 VAA049_2310 VAA049_2310 VAA049_2310 2582755 2583726 + D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2310 VAA049_2311 VAA049_2311 VAA049_2311 2583739 2584779 + membrane AbrB duplication domain protein gneg_AbrB_dup: membrane AbrB duplication domain protein~[R] COG3180 Putative ammonia monooxygenase gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2311 VAA049_2312 VAA049_2312 VAA049_2312 2584981 2586546 + AAA domain protein [S] COG4938 Uncharacterized conserved protein gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2312 VAA049_2313 VAA049_2313 VAA049_2313 2586548 2587657 + hypothetical protein gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2313 VAA049_2314 VAA049_2314 VAA049_2314 2587922 2588434 - spoU rRNA Methylase family protein [J] COG0219 Predicted rRNA methylase (SpoU class) gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2314 VAA049_2315 VAA049_2315 VAA049_2315 2588579 2589964 - transposase Tn5 dimerization domain protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2315 VAA049_2316 VAA049_2316 tkt tkt 2590128 2592122 - transketolase tktlase_bact: transketolase~[G] COG0021 Transketolase gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2316 VAA049_2317 VAA049_2317 tal tal 2592219 2593169 - transaldolase talAB: transaldolase~[G] COG0176 Transaldolase gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2317 VAA049_2318 VAA049_2318 VAA049_2318 2593762 2594754 + putative sugar-binding domain protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2318 VAA049_2319 VAA049_2319 VAA049_2319 2594878 2596173 + glycosyl hydrolases 18 family protein [G] COG3325 Chitinase gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2319 VAA049_232 VAA049_232 VAA049_232 253268 254635 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_232 VAA049_2320 VAA049_2320 VAA049_2320 2596329 2597159 - rhodanese-like domain protein [P] COG2897 Rhodanese-related sulfurtransferase gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2320 VAA049_2321 VAA049_2321 VAA049_2321 2597181 2597549 - glyoxalase-like domain protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2321 VAA049_2322 VAA049_2322 moeB moeB 2597733 2598491 - molybdopterin synthase sulfurylase MoeB moeB: molybdopterin synthase sulfurylase MoeB~[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2322 VAA049_2323 VAA049_2323 VAA049_2323 2598500 2599735 - molybdenum cofactor synthesis domain protein molyb_syn: molybdenum cofactor synthesis domain protein~[H] COG0303 Molybdopterin biosynthesis enzyme gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2323 VAA049_2324 VAA049_2324 folE folE 2599887 2600540 + GTP cyclohydrolase I folE: GTP cyclohydrolase I~[H] COG0302 GTP cyclohydrolase I gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2324 VAA049_2325 VAA049_2325 msrA msrA 2600637 2601773 - peptide-methionine (S)-S-oxide reductase msrA: peptide-methionine (S)-S-oxide reductase~[O] COG0225 Peptide methionine sulfoxide reductase gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2325 VAA049_2326 VAA049_2326 VAA049_2326 2601949 2603697 - formate--tetrahydrofolate ligase family protein [F] COG2759 Formyltetrahydrofolate synthetase gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2326 VAA049_2327 VAA049_2327 mscL mscL 2603927 2604337 - large conductance mechanosensitive channel protein mscL: large conductance mechanosensitive channel protein~[M] COG1970 Large-conductance mechanosensitive channel gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2327 VAA049_2328 VAA049_2328 VAA049_2328 2604604 2605254 - DJ-1/PfpI family protein [Q] COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2328 VAA049_2329 VAA049_2329 VAA049_2329 2605259 2605435 - hypothetical protein conserved hypothetical protein gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2329 VAA049_233 VAA049_233 tpiA tpiA 254789 255562 - triose-phosphate isomerase tim: triose-phosphate isomerase~[G] COG0149 Triosephosphate isomerase gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_233 VAA049_2330 VAA049_2330 VAA049_2330 2605636 2606310 + noncanonical pyrimidine nucleotidase%2C YjjG family yjjG/YfnB: noncanonical pyrimidine nucleotidase%2C YjjG family~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2330 VAA049_2331 VAA049_2331 VAA049_2331 2606371 2606778 - hypothetical protein transcription elongation factor%2C GreA/GreB%2C C-term family protein~[K] COG0782 Transcription elongation factor gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2331 VAA049_2332 VAA049_2332 phnX phnX 2606943 2607755 - phosphonoacetaldehyde hydrolase phosphonatase: phosphonoacetaldehyde hydrolase~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2332 VAA049_2333 VAA049_2333 VAA049_2333 2607765 2609162 - aminotransferase class-III family protein [E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2333 VAA049_2334 VAA049_2334 phnW phnW 2609180 2610283 - 2-aminoethylphosphonate--pyruvate transaminase transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase~[E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2334 VAA049_2335 VAA049_2335 VAA049_2335 2610528 2611535 + putative 2-aminoethylphosphonate ABC transporter%2C periplasmic 2-aminoethylphosphonate-binding protein phnS2: putative 2-aminoethylphosphonate ABC transporter%2C periplasmic 2-aminoethylphosphonate-binding protein~[P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2335 VAA049_2336 VAA049_2336 VAA049_2336 2611672 2612874 + putative 2-aminoethylphosphonate ABC transporter%2C ATP-binding protein phnT2: putative 2-aminoethylphosphonate ABC transporter%2C ATP-binding protein~[E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2336 VAA049_2337 VAA049_2337 VAA049_2337 2612885 2614585 + putative 2-aminoethylphosphonate ABC transporter%2C permease protein phnU2: putative 2-aminoethylphosphonate ABC transporter%2C permease protein~[P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2337 VAA049_2338 VAA049_2338 phnR phnR 2614610 2615314 + phosphonate utilization transcriptional regulator PhnR phnR: phosphonate utilization transcriptional regulator PhnR~[K] COG2188 Transcriptional regulators gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2338 VAA049_2339 VAA049_2339 VAA049_2339 2615380 2616285 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2339 VAA049_234 VAA049_234 VAA049_234 255806 256156 + 5-carboxymethyl-2-hydroxymuconate isomerase family protein [E] COG3232 5-carboxymethyl-2-hydroxymuconate isomerase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_234 VAA049_2340 VAA049_2340 VAA049_2340 2616386 2617819 - amino acid/peptide transporter family protein yjdL_sub1_fam: amino acid/peptide transporter family protein~[E] COG3104 Dipeptide/tripeptide permease gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2340 VAA049_2341 VAA049_2341 VAA049_2341 2618077 2619006 + hypothetical protein conserved hypothetical protein~[S] COG1434 Uncharacterized conserved protein gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2341 VAA049_2342 VAA049_2342 VAA049_2342 2619088 2619339 - hypothetical protein conserved hypothetical protein~[R] COG3042 Putative hemolysin gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2342 VAA049_2343 VAA049_2343 VAA049_2343 2619580 2620512 + hypothetical protein conserved hypothetical protein~[R] COG0618 Exopolyphosphatase-related proteins gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2343 VAA049_2344 VAA049_2344 VAA049_2344 2620605 2621126 + NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2344 VAA049_2345 VAA049_2345 VAA049_2345 2621340 2623157 + bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2345 VAA049_2346 VAA049_2346 VAA049_2346 2623166 2624248 + binding--dependent transport system inner membrane component family protein [R] COG4174 ABC-type uncharacterized transport system%2C permease component gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2346 VAA049_2347 VAA049_2347 VAA049_2347 2624248 2625303 + binding--dependent transport system inner membrane component family protein [R] COG4239 ABC-type uncharacterized transport system%2C permease component gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2347 VAA049_2348 VAA049_2348 nikE nikE 2625300 2626892 + nickel import ATP-binding protein NikE nickel_nikE: nickel import ATP-binding protein NikE~[R] COG4172 ABC-type uncharacterized transport system%2C duplicated ATPase component gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2348 VAA049_2349 VAA049_2349 VAA049_2349 2626975 2627367 - hypothetical protein conserved hypothetical protein~[R] COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2349 VAA049_235 VAA049_235 VAA049_235 256176 256616 + hypothetical protein conserved hypothetical protein~[S] COG3152 Predicted membrane protein gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_235 VAA049_2350 VAA049_2350 VAA049_2350 2627364 2627960 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2350 VAA049_2351 VAA049_2351 VAA049_2351 2628062 2628673 + hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2351 VAA049_2352 VAA049_2352 VAA049_2352 2628685 2629353 + hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2352 VAA049_2353 VAA049_2353 VAA049_2353 2629439 2630224 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2353 VAA049_2354 VAA049_2354 VAA049_2354 2630340 2630831 + S4 domain protein [S] COG2501 Uncharacterized conserved protein gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2354 VAA049_2355 VAA049_2355 VAA049_2355 2630988 2631779 - peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2355 VAA049_2356 VAA049_2356 VAA049_2356 2631947 2632399 + hypothetical protein conserved hypothetical protein~[Q] COG2050 Uncharacterized protein%2C possibly involved in aromatic compounds catabolism gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2356 VAA049_2357 VAA049_2357 VAA049_2357 2632400 2632633 + hypothetical protein conserved hypothetical protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2357 VAA049_2358 VAA049_2358 VAA049_2358 2632714 2634411 + bacterial extracellular solute-binding s%2C 5 Middle family protein [R] COG4533 ABC-type uncharacterized transport system%2C periplasmic component gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2358 VAA049_2359 VAA049_2359 VAA049_2359 2634735 2636816 - TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2359 VAA049_236 VAA049_236 VAA049_236 256745 257104 - hypothetical protein conserved hypothetical protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_236 VAA049_2360 VAA049_2360 VAA049_2360 2637049 2637936 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2360 VAA049_2361 VAA049_2361 VAA049_2361 2637986 2640667 - acetyltransferase family protein [C] COG1042 Acyl-CoA synthetase (NDP forming) gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2361 VAA049_2362 VAA049_2362 VAA049_2362 2640886 2641461 + sporulation related domain protein [S] COG3266 Uncharacterized protein conserved in bacteria gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2362 VAA049_2363 VAA049_2363 VAA049_2363 2641612 2642616 + D-alanine--D-alanine ligase family protein D_ala_D_alaTIGR: D-alanine--D-alanine ligase family protein~[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2363 VAA049_2364 VAA049_2364 VAA049_2364 2642788 2643171 + hypothetical protein conserved hypothetical protein gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2364 VAA049_2365 VAA049_2365 VAA049_2365 2643179 2643490 + translation initiation factor SUI1 family protein [J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2365 VAA049_2366 VAA049_2366 VAA049_2366 2643793 2644161 - phage related family protein gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2366 VAA049_2367 VAA049_2367 VAA049_2367 2644281 2644484 + hypothetical protein conserved hypothetical protein gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2367 VAA049_2368 VAA049_2368 VAA049_2368 2644484 2645740 + replication initiation factor family protein [L] COG2946 Putative phage replication protein RstA gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2368 VAA049_2369 VAA049_2369 VAA049_2369 2645733 2646056 + CTX phage RstB family protein gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2369 VAA049_237 VAA049_237 VAA049_237 257243 257860 - deoR-like helix-turn-helix domain protein [K] COG2345 Predicted transcriptional regulator gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_237 VAA049_2370 VAA049_2370 VAA049_2370 2646060 2646290 + putative membrane protein gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2370 VAA049_2371 VAA049_2371 VAA049_2371 2646324 2646533 + hypothetical protein conserved hypothetical protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2371 VAA049_2372 VAA049_2372 VAA049_2372 2646668 2648083 + hypothetical protein conserved hypothetical protein gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2372 VAA049_2373 VAA049_2373 VAA049_2373 2648083 2648427 + putative accessory cholera enterotoxin gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2373 VAA049_2374 VAA049_2374 VAA049_2374 2648430 2649794 + zonular occludens toxin family protein [R] COG4128 Zonula occludens toxin gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2374 VAA049_2375 VAA049_2375 VAA049_2375 2649804 2649989 + hypothetical protein conserved hypothetical protein gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2375 VAA049_2376 VAA049_2376 VAA049_2376 2650431 2650802 - phage family protein gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2376 VAA049_2377 VAA049_2377 VAA049_2377 2651250 2651411 - hypothetical protein conserved hypothetical protein~[S] COG3140 Uncharacterized protein conserved in bacteria gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2377 VAA049_2378 VAA049_2378 VAA049_2378 2651452 2652522 - F plasmid transfer operon%2C TraF%2C family protein gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2378 VAA049_2379 VAA049_2379 VAA049_2379 2652679 2653563 - hypothetical protein conserved hypothetical protein gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2379 VAA049_238 VAA049_238 VAA049_238 258220 258510 + chaperonin 10 Kd subunit [O] COG0234 Co-chaperonin GroES (HSP10) gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_238 VAA049_2380 VAA049_2380 VAA049_2380 2653566 2654222 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2380 VAA049_2381 VAA049_2381 VAA049_2381 2654197 2655678 - his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2381 VAA049_2382 VAA049_2382 VAA049_2382 2655797 2657173 - NAD(P) transhydrogenase beta subunit [C] COG1282 NAD/NADP transhydrogenase beta subunit gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2382 VAA049_2383 VAA049_2383 pntA pntA 2657185 2658723 - NAD(P)(+) transhydrogenase (AB-specific)%2C alpha subunit pntA: NAD(P)(+) transhydrogenase (AB-specific)%2C alpha subunit~[C] COG3288 NAD/NADP transhydrogenase alpha subunit gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2383 VAA049_2384 VAA049_2384 VAA049_2384 2659016 2659294 - transcriptional activator HlyU family protein [S] COG5453 Uncharacterized conserved protein gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2384 VAA049_2385 VAA049_2385 VAA049_2385 2659304 2659678 - late competence development ComFB family protein gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2385 VAA049_2386 VAA049_2386 VAA049_2386 2661269 2662207 - hypothetical protein conserved hypothetical protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2386 VAA049_2387 VAA049_2387 VAA049_2387 2660034 2661272 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2387 VAA049_2388 VAA049_2388 VAA049_2388 2662327 2663895 - gamma-glutamyltranspeptidase family protein [E] COG0405 Gamma-glutamyltransferase gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2388 VAA049_2389 VAA049_2389 VAA049_2389 2663992 2664066 - tRNA-Gly tRNA gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2389 VAA049_239 VAA049_239 groL groL 258564 260198 + chaperonin GroL groEL: chaperonin GroL~[O] COG0459 Chaperonin GroEL (HSP60 family) gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_239 VAA049_2390 VAA049_2390 VAA049_2390 2664190 2665575 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2390 VAA049_2391 VAA049_2391 VAA049_2391 2665869 2666411 - hypothetical protein conserved hypothetical protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2391 VAA049_2392 VAA049_2392 VAA049_2392 2666834 2668066 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2392 VAA049_2393 VAA049_2393 VAA049_2393 2668417 2670774 + fatty acid cis/trans isomerase family protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2393 VAA049_2394 VAA049_2394 VAA049_2394 2670986 2671171 + hypothetical protein conserved hypothetical protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2394 VAA049_2395 VAA049_2395 VAA049_2395 2671225 2672307 - peptidase M50 family protein [R] COG1994 Zn-dependent proteases gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2395 VAA049_2396 VAA049_2396 VAA049_2396 2672500 2673066 + phnA Zinc-Ribbon family protein [P] COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2396 VAA049_2397 VAA049_2397 VAA049_2397 2673216 2673404 - hypothetical protein conserved hypothetical protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2397 VAA049_2398 VAA049_2398 VAA049_2398 2673708 2674664 - integral membrane%2C TerC family protein R_switched_Alx: integral membrane%2C TerC family protein~[P] COG0861 Membrane protein TerC%2C possibly involved in tellurium resistance gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2398 VAA049_2399 VAA049_2399 VAA049_2399 2674978 2675073 - putative membrane protein gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2399 VAA049_24 VAA049_24 VAA049_24 25939 26925 - phosphotransferase enzyme family protein [R] COG2334 Putative homoserine kinase type II (protein kinase fold) gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_24 VAA049_240 VAA049_240 VAA049_240 260409 260969 + hypothetical protein conserved hypothetical protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_240 VAA049_2400 VAA049_2400 VAA049_2400 2675223 2676965 - hypothetical protein 5'-nucleotidase%2C C-terminal domain protein~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2400 VAA049_2401 VAA049_2401 VAA049_2401 2677228 2678859 + hypothetical protein conserved hypothetical protein~[L] COG3593 Predicted ATP-dependent endonuclease of the OLD family gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2401 VAA049_2402 VAA049_2402 VAA049_2402 2679094 2679591 - hypothetical protein conserved hypothetical protein gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2402 VAA049_2403 VAA049_2403 VAA049_2403 2679768 2680673 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2403 VAA049_2404 VAA049_2404 focA focA 2680890 2682341 + formate transporter FocA formate_focA: formate transporter FocA~[P] COG2116 Formate/nitrite family of transporters gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2404 VAA049_2405 VAA049_2405 VAA049_2405 2682449 2683018 - yceI-like domain protein [S] COG2353 Uncharacterized conserved protein gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2405 VAA049_2406 VAA049_2406 VAA049_2406 2683015 2683560 - prokaryotic cytochrome b561 family protein [C] COG3038 Cytochrome B561 gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2406 VAA049_2407 VAA049_2407 VAA049_2407 2683947 2684582 + hypothetical protein conserved hypothetical protein gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2407 VAA049_2408 VAA049_2408 VAA049_2408 2684978 2685775 + EAL domain protein [T] COG2200 FOG: EAL domain gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2408 VAA049_2409 VAA049_2409 VAA049_2409 2685908 2686288 + hypothetical protein conserved hypothetical protein gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2409 VAA049_241 VAA049_241 epmB epmB 261007 262029 - EF-P beta-lysylation protein EpmB EFP_modif_epmB: EF-P beta-lysylation protein EpmB~[E] COG1509 Lysine 2%2C3-aminomutase gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_241 VAA049_2410 VAA049_2410 VAA049_2410 2686451 2687125 + hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2410 VAA049_2411 VAA049_2411 tatA tatA 2687341 2687577 - twin arginine-targeting translocase%2C TatA/E family protein tatAE: twin arginine-targeting translocase%2C TatA/E family protein~[U] COG1826 Sec-independent protein secretion pathway components gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2411 VAA049_2412 VAA049_2412 VAA049_2412 2687777 2688469 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2412 VAA049_2413 VAA049_2413 VAA049_2413 2688459 2689952 - his Kinase A domain protein [T] COG2205 Osmosensitive K+ channel histidine kinase gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2413 VAA049_2414 VAA049_2414 nifJ nifJ 2690055 2693294 + ferredoxin (flavodoxin) oxidoreductase pyruvate:ferredoxin (flavodoxin) oxidoreductase~pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase~[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C gamma subunit gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2414 VAA049_2415 VAA049_2415 kup kup 2693392 2695254 - potassium uptake protein kup: potassium uptake protein~[P] COG3158 K+ transporter gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2415 VAA049_2416 VAA049_2416 ylqF ylqF 2695576 2696520 + ribosome biogenesis GTP-binding protein YlqF GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF~[R] COG1161 Predicted GTPases gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2416 VAA049_2417 VAA049_2417 VAA049_2417 2696597 2697586 - type II/IV secretion system family protein [R] COG0523 Putative GTPases (G3E family) gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2417 VAA049_2418 VAA049_2418 VAA049_2418 2698053 2699459 + voltage gated chloride channel family protein [P] COG0038 Chloride channel protein EriC gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2418 VAA049_2419 VAA049_2419 VAA049_2419 2699606 2700568 + voltage-dependent anion channel family protein [P] COG1275 Tellurite resistance protein and related permeases gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2419 VAA049_242 VAA049_242 efp efp 262062 262628 + translation elongation factor P efp: translation elongation factor P~[J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_242 VAA049_2420 VAA049_2420 cqsA cqsA 2700765 2701934 + CAI-1 autoinducer synthase [H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2420 VAA049_2421 VAA049_2421 cqsS cqsS 2702037 2704019 - CAI-1 autoinducer sensor kinase/phosphatase CqsS [T] COG0642 Signal transduction histidine kinase gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2421 VAA049_2422 VAA049_2422 VAA049_2422 2704194 2707235 - AAA domain protein [L] COG0419 ATPase involved in DNA repair gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2422 VAA049_2423 VAA049_2423 sbcD sbcD 2707237 2708376 - exonuclease SbcCD%2C D subunit sbcd: exonuclease SbcCD%2C D subunit~[L] COG0420 DNA repair exonuclease gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2423 VAA049_2424 VAA049_2424 VAA049_2424 2708430 2709410 - D-fructose-responsive transcription factor family protein fruct_sucro_rep: D-fructose-responsive transcription factor family protein~[K] COG1609 Transcriptional regulators gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2424 VAA049_2425 VAA049_2425 VAA049_2425 2709749 2710936 + phosphocarrier%2C HPr family protein PTS_HPr_: phosphocarrier%2C HPr family protein~[G] COG4668 Mannitol/fructose-specific phosphotransferase system%2C IIA domain gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2425 VAA049_2426 VAA049_2426 pfkB pfkB 2710947 2711900 + 1-phosphofructokinase pfkB: 1-phosphofructokinase~[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2426 VAA049_2427 VAA049_2427 VAA049_2427 2711919 2713655 + PTS system%2C Fru family%2C IIB component domain protein FRU: PTS system%2C Fru family%2C IIB component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2427 VAA049_2428 VAA049_2428 VAA049_2428 2713889 2714572 - ATP-dependent zinc protease family protein [O] COG4067 Uncharacterized protein conserved in archaea gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2428 VAA049_2429 VAA049_2429 VAA049_2429 2714630 2715811 - aminotransferase class I and II family protein [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2429 VAA049_243 VAA049_243 VAA049_243 262742 263104 - fumarate reductase subunit D family protein [C] COG3080 Fumarate reductase subunit D gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_243 VAA049_2430 VAA049_2430 nrdG nrdG 2715933 2716400 - anaerobic ribonucleoside-triphosphate reductase activating protein nrdG: anaerobic ribonucleoside-triphosphate reductase activating protein~[O] COG0602 Organic radical activating enzymes gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2430 VAA049_2431 VAA049_2431 nrdD nrdD 2716405 2718525 - anaerobic ribonucleoside-triphosphate reductase nrdD: anaerobic ribonucleoside-triphosphate reductase~[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2431 VAA049_2432 VAA049_2432 VAA049_2432 2718988 2721783 - type I phosphodiesterase / nucleotide pyrophosphatase family protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2432 VAA049_2433 VAA049_2433 VAA049_2433 2722425 2723465 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2433 VAA049_2434 VAA049_2434 VAA049_2434 2723717 2724256 - histidine phosphatase super family protein [G] COG0406 Fructose-2%2C6-bisphosphatase gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2434 VAA049_2435 VAA049_2435 VAA049_2435 2724428 2724724 - stress responsive A/B Barrel domain protein gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2435 VAA049_2436 VAA049_2436 VAA049_2436 2724949 2725401 + hypothetical protein conserved hypothetical protein~[S] COG5642 Uncharacterized conserved protein gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2436 VAA049_2437 VAA049_2437 VAA049_2437 2725401 2725871 + RES domain protein [S] COG5654 Uncharacterized conserved protein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2437 VAA049_2438 VAA049_2438 VAA049_2438 2726003 2726521 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2438 VAA049_2439 VAA049_2439 VAA049_2439 2726677 2726964 - plasmid stabilization system family protein [R] COG3668 Plasmid stabilization system protein gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2439 VAA049_244 VAA049_244 VAA049_244 263115 263498 - fumarate reductase subunit C family protein [C] COG3029 Fumarate reductase subunit C gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_244 VAA049_2440 VAA049_2440 VAA049_2440 2726961 2727242 - prevent-host-death family protein phd_fam: prevent-host-death family protein~[D] COG2161 Antitoxin of toxin-antitoxin stability system gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2440 VAA049_2441 VAA049_2441 VAA049_2441 2727502 2727738 - hypothetical protein conserved hypothetical protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2441 VAA049_2442 VAA049_2442 VAA049_2442 2727978 2728331 - snoaL-like domain protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2442 VAA049_2443 VAA049_2443 VAA049_2443 2729074 2730033 + integrase core domain protein [L] COG2826 Transposase and inactivated derivatives%2C IS30 family gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2443 VAA049_2444 VAA049_2444 VAA049_2444 2730056 2730634 - DJ-1/PfpI family protein [R] COG0693 Putative intracellular protease/amidase gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2444 VAA049_2445 VAA049_2445 VAA049_2445 2730831 2731115 + relB antitoxin family protein gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2445 VAA049_2446 VAA049_2446 VAA049_2446 2731112 2731390 + addiction module toxin%2C RelE/StbE family protein relE_StbE: addiction module toxin%2C RelE/StbE family protein~[R] COG3668 Plasmid stabilization system protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2446 VAA049_2447 VAA049_2447 VAA049_2447 2731538 2731987 - integron cassette protein VCH-CASS2 [S] COG3708 Uncharacterized protein conserved in bacteria gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2447 VAA049_2448 VAA049_2448 VAA049_2448 2732123 2732611 - hypothetical protein conserved hypothetical protein gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2448 VAA049_2449 VAA049_2449 VAA049_2449 2732754 2733758 - LD-carboxypeptidase family protein [V] COG1619 Uncharacterized proteins%2C homologs of microcin C7 resistance protein MccF gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2449 VAA049_245 VAA049_245 VAA049_245 263501 264259 - succinate dehydrogenase and fumarate reductase iron-sulfur family protein dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein~[C] COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_245 VAA049_2450 VAA049_2450 VAA049_2450 2733966 2734391 - hypothetical protein conserved hypothetical protein gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2450 VAA049_2451 VAA049_2451 VAA049_2451 2734662 2735096 - acetyltransferase domain protein [R] COG0456 Acetyltransferases gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2451 VAA049_2452 VAA049_2452 VAA049_2452 2735253 2735666 - acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2452 VAA049_2453 VAA049_2453 VAA049_2453 2735825 2736334 - AAA domain protein [F] COG0563 Adenylate kinase and related kinases gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2453 VAA049_2454 VAA049_2454 VAA049_2454 2736471 2736974 - dinB family protein [S] COG2318 Uncharacterized protein conserved in bacteria gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2454 VAA049_2455 VAA049_2455 VAA049_2455 2737241 2737939 + helix-turn-helix domain protein [L] COG2826 Transposase and inactivated derivatives%2C IS30 family gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2455 VAA049_2456 VAA049_2456 VAA049_2456 2738066 2738371 + integrase core domain protein [L] COG2826 Transposase and inactivated derivatives%2C IS30 family gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2456 VAA049_2457 VAA049_2457 VAA049_2457 2738629 2739669 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2457 VAA049_2458 VAA049_2458 VAA049_2458 2739972 2740484 - hypothetical protein gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2458 VAA049_2459 VAA049_2459 VAA049_2459 2740635 2741060 - hypothetical protein conserved hypothetical protein gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2459 VAA049_246 VAA049_246 frdA frdA 264259 266067 - fumarate reductase%2C flavoprotein subunit fum_red_Fp: fumarate reductase%2C flavoprotein subunit~[C] COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_246 VAA049_2460 VAA049_2460 VAA049_2460 2741295 2741801 - acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2460 VAA049_2461 VAA049_2461 VAA049_2461 2741939 2742538 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2461 VAA049_2462 VAA049_2462 VAA049_2462 2742683 2742946 - ASCH domain protein [S] COG4405 Uncharacterized protein conserved in bacteria gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2462 VAA049_2463 VAA049_2463 VAA049_2463 2743012 2743173 - hypothetical protein conserved hypothetical protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2463 VAA049_2464 VAA049_2464 VAA049_2464 2743944 2744720 - FRG domain protein gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2464 VAA049_2465 VAA049_2465 VAA049_2465 2745437 2745739 - addiction module toxin%2C RelE/StbE family protein relE_StbE: addiction module toxin%2C RelE/StbE family protein~[R] COG3668 Plasmid stabilization system protein gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2465 VAA049_2466 VAA049_2466 VAA049_2466 2745727 2745984 - prevent-host-death family protein phd_fam: prevent-host-death family protein~[D] COG2161 Antitoxin of toxin-antitoxin stability system gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2466 VAA049_2467 VAA049_2467 VAA049_2467 2746175 2746561 - biphenyl-2%2C3-diol 1%2C2-dioxygenase III-related protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2467 VAA049_2468 VAA049_2468 VAA049_2468 2746744 2746950 - hypothetical protein conserved hypothetical protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2468 VAA049_2469 VAA049_2469 VAA049_2469 2747778 2748275 - hypothetical protein conserved hypothetical protein gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2469 VAA049_247 VAA049_247 VAA049_247 266376 267350 + EF-P lysine aminoacylase GenX genX: EF-P lysine aminoacylase GenX~[J] COG2269 Truncated%2C possibly inactive%2C lysyl-tRNA synthetase (class II) gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_247 VAA049_2470 VAA049_2470 VAA049_2470 2748513 2749472 + integrase core domain protein [L] COG2826 Transposase and inactivated derivatives%2C IS30 family gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2470 VAA049_2471 VAA049_2471 VAA049_2471 2749759 2750568 - hypothetical protein conserved hypothetical protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2471 VAA049_2472 VAA049_2472 VAA049_2472 2750944 2751345 - death-on-curing family protein DOC_P1: death-on-curing family protein~[R] COG3654 Prophage maintenance system killer protein gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2472 VAA049_2473 VAA049_2473 VAA049_2473 2751345 2751515 - hypothetical protein conserved hypothetical protein~[J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2473 VAA049_2474 VAA049_2474 VAA049_2474 2752253 2752807 - maltose acetyltransferase family protein [R] COG0110 Acetyltransferase (isoleucine patch superfamily) gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2474 VAA049_2475 VAA049_2475 VAA049_2475 2753498 2753914 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2475 VAA049_2476 VAA049_2476 VAA049_2476 2754063 2754497 - acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2476 VAA049_2477 VAA049_2477 VAA049_2477 2755359 2756318 + integrase core domain protein [L] COG2826 Transposase and inactivated derivatives%2C IS30 family gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2477 VAA049_2478 VAA049_2478 VAA049_2478 2756351 2756797 - hypothetical protein conserved hypothetical protein gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2478 VAA049_2479 VAA049_2479 VAA049_2479 2756934 2757386 - acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2479 VAA049_248 VAA049_248 VAA049_248 267480 267914 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_248 VAA049_2480 VAA049_2480 VAA049_2480 2757548 2757862 - hypothetical protein conserved hypothetical protein gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2480 VAA049_2481 VAA049_2481 VAA049_2481 2758000 2758494 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2481 VAA049_2482 VAA049_2482 VAA049_2482 2759167 2759655 - hypothetical protein conserved hypothetical protein gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2482 VAA049_2483 VAA049_2483 VAA049_2483 2759799 2760599 - phenazine biosynthesis%2C PhzF family protein phzF_: phenazine biosynthesis%2C PhzF family protein~[R] COG0384 Predicted epimerase%2C PhzC/PhzF homolog gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2483 VAA049_2484 VAA049_2484 VAA049_2484 2760816 2760977 - hypothetical protein conserved hypothetical protein gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2484 VAA049_2485 VAA049_2485 VAA049_2485 2761147 2761779 - hypothetical protein conserved hypothetical protein gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2485 VAA049_2486 VAA049_2486 VAA049_2486 2761926 2762378 - hypothetical protein gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2486 VAA049_2487 VAA049_2487 VAA049_2487 2762534 2762848 - hypothetical protein conserved hypothetical protein gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2487 VAA049_2488 VAA049_2488 VAA049_2488 2763495 2763890 - hypothetical protein conserved hypothetical protein gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2488 VAA049_2489 VAA049_2489 VAA049_2489 2764043 2764150 - hypothetical protein gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2489 VAA049_249 VAA049_249 secB secB 268081 268545 + protein-export chaperone SecB secB: protein-export chaperone SecB~[U] COG1952 Preprotein translocase subunit SecB gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_249 VAA049_2490 VAA049_2490 VAA049_2490 2764147 2765010 - hypothetical protein conserved hypothetical protein gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2490 VAA049_2491 VAA049_2491 VAA049_2491 2765263 2765541 - putative membrane protein gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2491 VAA049_2492 VAA049_2492 VAA049_2492 2766311 2766847 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2492 VAA049_2493 VAA049_2493 VAA049_2493 2766972 2767688 - transposase DDE domain protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2493 VAA049_2494 VAA049_2494 VAA049_2494 2768060 2768692 - HEPN domain protein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2494 VAA049_2495 VAA049_2495 VAA049_2495 2767891 2768100 + hypothetical protein gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2495 VAA049_2496 VAA049_2496 VAA049_2496 2768844 2769350 - acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2496 VAA049_2497 VAA049_2497 VAA049_2497 2769499 2769924 - hypothetical protein gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2497 VAA049_2498 VAA049_2498 VAA049_2498 2770087 2771127 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2498 VAA049_2499 VAA049_2499 VAA049_2499 2771438 2772247 - hypothetical protein conserved hypothetical protein gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2499 VAA049_25 VAA049_25 ccoG ccoG 26973 28397 - cytochrome c oxidase accessory protein CcoG ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG~[C] COG0348 Polyferredoxin gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_25 VAA049_250 VAA049_250 VAA049_250 268735 269769 + ketopantoate reductase PanE/ApbA family protein [C] COG0240 Glycerol-3-phosphate dehydrogenase gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_250 VAA049_2500 VAA049_2500 VAA049_2500 2772450 2773025 + phosphoribosyl-ATP pyrophosphohydrolase family protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2500 VAA049_2501 VAA049_2501 VAA049_2501 2773410 2774165 - ABC transporter family protein [H] COG4138 ABC-type cobalamin transport system%2C ATPase component gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2501 VAA049_2502 VAA049_2502 VAA049_2502 2774152 2775147 - fecCD transport family protein [H] COG4139 ABC-type cobalamin transport system%2C permease component gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2502 VAA049_2503 VAA049_2503 astE astE 2775228 2776256 - succinylglutamate desuccinylase [E] COG2988 Succinylglutamate desuccinylase gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2503 VAA049_2504 VAA049_2504 VAA049_2504 2776572 2777174 - histidine phosphatase super family protein [G] COG0406 Fructose-2%2C6-bisphosphatase gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2504 VAA049_2505 VAA049_2505 VAA049_2505 2777181 2777720 - cobinamide kinase / cobinamide phosphate guanyltransferase family protein [H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2505 VAA049_2506 VAA049_2506 cobS cobS 2777729 2778514 - cobalamin 5'-phosphate synthase cobS: cobalamin 5'-phosphate synthase~[H] COG0368 Cobalamin-5-phosphate synthase gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2506 VAA049_2507 VAA049_2507 cobT cobT 2778514 2779539 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~[H] COG2038 NaMN:DMB phosphoribosyltransferase gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2507 VAA049_2508 VAA049_2508 msrB msrB 2780024 2780470 - methionine-R-sulfoxide reductase [O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2508 VAA049_2509 VAA049_2509 VAA049_2509 2780816 2782189 + dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[R] COG1823 Predicted Na+/dicarboxylate symporter gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2509 VAA049_251 VAA049_251 cysE cysE 269842 270663 + serine O-acetyltransferase cysE: serine O-acetyltransferase~[E] COG1045 Serine acetyltransferase gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_251 VAA049_2510 VAA049_2510 VAA049_2510 2782333 2783757 + hypothetical protein exonuclease C-terminal family protein~[L] COG2925 Exonuclease I gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2510 VAA049_2511 VAA049_2511 VAA049_2511 2783786 2784160 + lrgA family protein [R] COG1380 Putative effector of murein hydrolase LrgA gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2511 VAA049_2512 VAA049_2512 VAA049_2512 2784151 2784825 + lrgB-like family protein [M] COG1346 Putative effector of murein hydrolase gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2512 VAA049_2513 VAA049_2513 cdd cdd 2784995 2785882 + cytidine deaminase cyt_deam_dimer: cytidine deaminase~[F] COG0295 Cytidine deaminase gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2513 VAA049_2514 VAA049_2514 VAA049_2514 2786041 2786916 + membrane transport family protein [R] COG0679 Predicted permeases gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2514 VAA049_2515 VAA049_2515 purT purT 2787070 2788245 + phosphoribosylglycinamide formyltransferase 2 purT: phosphoribosylglycinamide formyltransferase 2~[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2515 VAA049_2516 VAA049_2516 tmpT tmpT 2788338 2788994 - thiopurine S-methyltransferase%2C Se/Te detoxification family TMPT_Se_Te: thiopurine S-methyltransferase%2C Se/Te detoxification family~[QR] COG0500 SAM-dependent methyltransferases gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2516 VAA049_2517 VAA049_2517 VAA049_2517 2789292 2789396 + hypothetical protein conserved hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2517 VAA049_2518 VAA049_2518 VAA049_2518 2789463 2790242 + hypothetical protein region found in RelA / SpoT s family protein gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2518 VAA049_2519 VAA049_2519 ihfA ihfA 2790371 2790667 - integration host factor%2C alpha subunit himA: integration host factor%2C alpha subunit~[L] COG0776 Bacterial nucleoid DNA-binding protein gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2519 VAA049_252 VAA049_252 VAA049_252 270774 271313 - transcriptional regulator PadR-like family protein [K] COG1695 Predicted transcriptional regulators gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_252 VAA049_2520 VAA049_2520 pheT pheT 2791106 2793493 - phenylalanine--tRNA ligase%2C beta subunit pheT_bact: phenylalanine--tRNA ligase%2C beta subunit~[J] COG0072 Phenylalanyl-tRNA synthetase beta subunit gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2520 VAA049_2521 VAA049_2521 pheS pheS 2793520 2794503 - phenylalanine--tRNA ligase%2C alpha subunit pheS: phenylalanine--tRNA ligase%2C alpha subunit~[J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2521 VAA049_2522 VAA049_2522 VAA049_2522 2795276 2796394 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2522 VAA049_2523 VAA049_2523 VAA049_2523 2794794 2795279 + acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2523 VAA049_2524 VAA049_2524 VAA049_2524 2796642 2796717 - tRNA-Gly tRNA gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2524 VAA049_2525 VAA049_2525 VAA049_2525 2796728 2796814 - tRNA-Leu tRNA gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2525 VAA049_2526 VAA049_2526 VAA049_2526 2796879 2796954 - tRNA-Gly tRNA gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2526 VAA049_2527 VAA049_2527 VAA049_2527 2796957 2797030 - tRNA-Cys tRNA gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2527 VAA049_2528 VAA049_2528 pgsA pgsA 2797288 2797845 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~[I] COG0558 Phosphatidylglycerophosphate synthase gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2528 VAA049_2529 VAA049_2529 uvrC uvrC 2797893 2799725 - excinuclease ABC subunit C uvrC: excinuclease ABC subunit C~[L] COG0322 Nuclease subunit of the excinuclease complex gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2529 VAA049_253 VAA049_253 VAA049_253 271672 274302 - phosphoenolpyruvate carboxylase family protein [C] COG2352 Phosphoenolpyruvate carboxylase gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_253 VAA049_2530 VAA049_2530 VAA049_2530 2799725 2800369 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2530 VAA049_2531 VAA049_2531 VAA049_2531 2803080 2805179 - phosphotransferase system%2C EIIC family protein [G] COG1455 Phosphotransferase system cellobiose-specific component IIC gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2531 VAA049_2532 VAA049_2532 VAA049_2532 2800745 2803108 + DNA polymerase family B%2C exonuclease domain protein [L] COG0417 DNA polymerase elongation subunit (family B) gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2532 VAA049_2533 VAA049_2533 VAA049_2533 2805288 2806055 - nucleotidyltransferase domain protein gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2533 VAA049_2534 VAA049_2534 VAA049_2534 2806274 2806840 + elongation factor P (EF-P) OB domain protein [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2534 VAA049_2535 VAA049_2535 VAA049_2535 2806845 2807165 + hypothetical protein conserved hypothetical protein~[S] COG3099 Uncharacterized protein conserved in bacteria gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2535 VAA049_2536 VAA049_2536 VAA049_2536 2807304 2808251 + outer membrane beta-barrel domain protein gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2536 VAA049_2537 VAA049_2537 hutC hutC 2808366 2809076 + histidine utilization repressor his_ut_repres: histidine utilization repressor~[K] COG2188 Transcriptional regulators gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2537 VAA049_2538 VAA049_2538 hutI hutI 2809180 2810388 + imidazolonepropionase hutI: imidazolonepropionase~[Q] COG1228 Imidazolonepropionase and related amidohydrolases gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2538 VAA049_2539 VAA049_2539 hutG hutG 2810378 2811400 + formimidoylglutamase hutG: formimidoylglutamase~[E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase%2C arginase family gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2539 VAA049_254 VAA049_254 argE argE 274509 275645 - acetylornithine deacetylase acOrn-deacetyl: acetylornithine deacetylase~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_254 VAA049_2540 VAA049_2540 hutU hutU 2811419 2813116 + urocanate hydratase hutU: urocanate hydratase~[E] COG2987 Urocanate hydratase gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2540 VAA049_2541 VAA049_2541 hutH hutH 2813128 2814663 + histidine ammonia-lyase hutH: histidine ammonia-lyase~[E] COG2986 Histidine ammonia-lyase gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2541 VAA049_2542 VAA049_2542 VAA049_2542 2814812 2815537 + hypothetical protein conserved hypothetical protein gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2542 VAA049_2543 VAA049_2543 VAA049_2543 2815612 2816823 - GlyGly-CTERM domain protein glyGly_CTERM: GlyGly-CTERM domain protein~[O] COG5640 Secreted trypsin-like serine protease gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2543 VAA049_2544 VAA049_2544 VAA049_2544 2817073 2817534 - phospholipid methyltransferase family protein [O] COG2020 Putative protein-S-isoprenylcysteine methyltransferase gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2544 VAA049_2545 VAA049_2545 VAA049_2545 2817590 2820625 - hypothetical protein FAD linked oxidase%2C C-terminal domain protein~[C] COG0277 FAD/FMN-containing dehydrogenases gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2545 VAA049_2546 VAA049_2546 VAA049_2546 2820838 2821521 + chemotaxis phosphatase CheX family protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2546 VAA049_2547 VAA049_2547 VAA049_2547 2821652 2822335 + hypothetical protein conserved hypothetical protein gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2547 VAA049_2548 VAA049_2548 VAA049_2548 2822438 2823106 + glycine zipper 2TM domain protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2548 VAA049_2549 VAA049_2549 VAA049_2549 2823207 2824223 + sel1 repeat family protein [O] COG2214 DnaJ-class molecular chaperone gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2549 VAA049_255 VAA049_255 argC argC 275801 276802 + N-acetyl-gamma-glutamyl-phosphate reductase argC: N-acetyl-gamma-glutamyl-phosphate reductase~[E] COG0002 Acetylglutamate semialdehyde dehydrogenase gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_255 VAA049_2550 VAA049_2550 VAA049_2550 2824374 2824556 + hypothetical protein conserved hypothetical protein gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2550 VAA049_2551 VAA049_2551 VAA049_2551 2824847 2825245 + superfamily II DNA and RNA helicase gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2551 VAA049_2552 VAA049_2552 purC purC 2825411 2826517 + phosphoribosylaminoimidazole-succinocarboxamide synthase purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase~[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2552 VAA049_2553 VAA049_2553 VAA049_2553 2826719 2827069 - hypothetical protein conserved hypothetical protein gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2553 VAA049_2554 VAA049_2554 VAA049_2554 2827535 2829223 + malic enzyme%2C NAD binding domain protein [C] COG0281 Malic enzyme gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2554 VAA049_2555 VAA049_2555 VAA049_2555 2829266 2829595 + hypothetical protein conserved hypothetical protein gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2555 VAA049_2556 VAA049_2556 VAA049_2556 2829568 2830332 + hypothetical protein conserved hypothetical protein~[S] COG2949 Uncharacterized membrane protein gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2556 VAA049_2557 VAA049_2557 VAA049_2557 2830433 2831764 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2557 VAA049_2558 VAA049_2558 VAA049_2558 2832021 2833274 - cys/Met metabolism PLP-dependent enzyme family protein [E] COG0520 Selenocysteine lyase gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2558 VAA049_2559 VAA049_2559 VAA049_2559 2833258 2833914 - 2OG-Fe dioxygenase family protein [S] COG4340 Uncharacterized protein conserved in bacteria gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2559 VAA049_256 VAA049_256 argB argB 276812 277600 + acetylglutamate kinase argB: acetylglutamate kinase~[E] COG0548 Acetylglutamate kinase gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_256 VAA049_2560 VAA049_2560 trxB trxB 2834392 2835348 + thioredoxin-disulfide reductase TRX_reduct: thioredoxin-disulfide reductase~[O] COG0492 Thioredoxin reductase gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2560 VAA049_2561 VAA049_2561 cydD cydD 2835468 2837255 + thiol reductant ABC exporter%2C CydD subunit cydD: thiol reductant ABC exporter%2C CydD subunit~[CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis%2C ATPase and permease components gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2561 VAA049_2562 VAA049_2562 cydC cydC 2837248 2838969 + thiol reductant ABC exporter%2C CydC subunit cydC: thiol reductant ABC exporter%2C CydC subunit~[CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis%2C fused ATPase and permease components gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2562 VAA049_2563 VAA049_2563 VAA049_2563 2839103 2840068 - pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2563 VAA049_2564 VAA049_2564 VAA049_2564 2840201 2840821 - tRNA threonylcarbamoyl adenosine modification protein%2C Sua5/YciO/YrdC/YwlC family [J] COG0009 Putative translation factor (SUA5) gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2564 VAA049_2565 VAA049_2565 VAA049_2565 2840824 2841696 - PHP domain protein [R] COG0613 Predicted metal-dependent phosphoesterases (PHP family) gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2565 VAA049_2566 VAA049_2566 trpE trpE 2842032 2843603 + anthranilate synthase component I trpE_proteo: anthranilate synthase component I~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2566 VAA049_2567 VAA049_2567 VAA049_2567 2843606 2844211 + glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein trpG_papA: glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein~[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2567 VAA049_2568 VAA049_2568 trpD trpD 2844232 2845230 + anthranilate phosphoribosyltransferase trpD: anthranilate phosphoribosyltransferase~[E] COG0547 Anthranilate phosphoribosyltransferase gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2568 VAA049_2569 VAA049_2569 VAA049_2569 2845236 2846645 + indole-3-glycerol phosphate synthase family protein [E] COG0134 Indole-3-glycerol phosphate synthase gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2569 VAA049_257 VAA049_257 argG argG 277676 278890 + argininosuccinate synthase argG: argininosuccinate synthase~[E] COG0137 Argininosuccinate synthase gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_257 VAA049_2570 VAA049_2570 trpB trpB 2846686 2847876 + tryptophan synthase%2C beta subunit trpB: tryptophan synthase%2C beta subunit~[E] COG0133 Tryptophan synthase beta chain gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2570 VAA049_2571 VAA049_2571 trpA trpA 2847876 2848682 + tryptophan synthase%2C alpha subunit trpA: tryptophan synthase%2C alpha subunit~[E] COG0159 Tryptophan synthase alpha chain gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2571 VAA049_2572 VAA049_2572 VAA049_2572 2848998 2850254 + dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[C] COG1301 Na+/H+-dicarboxylate symporters gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2572 VAA049_2573 VAA049_2573 VAA049_2573 2850356 2850934 - thymidine kinase family protein [F] COG1435 Thymidine kinase gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2573 VAA049_2574 VAA049_2574 aspS aspS 2851031 2852806 - aspartate--tRNA ligase aspS_bact: aspartate--tRNA ligase~[J] COG0173 Aspartyl-tRNA synthetase gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2574 VAA049_2575 VAA049_2575 VAA049_2575 2853098 2853967 + hypothetical protein conserved hypothetical protein~[S] COG1801 Uncharacterized conserved protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2575 VAA049_2576 VAA049_2576 cmoA cmoA 2854105 2854833 + tRNA (cmo5U34)-methyltransferase [QR] COG0500 SAM-dependent methyltransferases gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2576 VAA049_2577 VAA049_2577 cmoB cmoB 2854945 2855916 + tRNA (mo5U34)-methyltransferase [QR] COG0500 SAM-dependent methyltransferases gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2577 VAA049_2578 VAA049_2578 VAA049_2578 2856036 2856773 + ATP-dependent zinc protease family protein [O] COG4067 Uncharacterized protein conserved in archaea gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2578 VAA049_2579 VAA049_2579 VAA049_2579 2856782 2858290 + 7 transmembrane helices usually fused to an inactive transglutaminase family protein gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2579 VAA049_258 VAA049_258 argH argH 279124 280500 + argininosuccinate lyase argH: argininosuccinate lyase~[E] COG0165 Argininosuccinate lyase gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_258 VAA049_2580 VAA049_2580 VAA049_2580 2858290 2859279 + prokaryotic glutathione synthetase%2C ATP-grasp domain protein gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2580 VAA049_2581 VAA049_2581 serC serC 2859360 2860454 - phosphoserine transaminase serC_1: phosphoserine transaminase~[HE] COG1932 Phosphoserine aminotransferase gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2581 VAA049_2582 VAA049_2582 VAA049_2582 2860576 2861841 - hypothetical protein conserved hypothetical protein~[S] COG5339 Uncharacterized protein conserved in bacteria gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2582 VAA049_2583 VAA049_2583 VAA049_2583 2862064 2864019 + his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2583 VAA049_2584 VAA049_2584 VAA049_2584 2864016 2864513 + response regulator [T] COG0784 FOG: CheY-like receiver gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2584 VAA049_2585 VAA049_2585 VAA049_2585 2864704 2865252 + hypothetical protein conserved hypothetical protein gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2585 VAA049_2586 VAA049_2586 VAA049_2586 2865348 2865935 - hypothetical protein tfoX N-terminal domain protein~[K] COG3070 Regulator of competence-specific genes gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2586 VAA049_2587 VAA049_2587 VAA049_2587 2866313 2867233 + HDOD domain protein [T] COG1639 Predicted signal transduction protein gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2587 VAA049_2588 VAA049_2588 VAA049_2588 2867254 2868159 + hypothetical protein conserved hypothetical protein~[S] COG2431 Predicted membrane protein gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2588 VAA049_2589 VAA049_2589 VAA049_2589 2868348 2868857 + hypothetical protein conserved hypothetical protein gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2589 VAA049_259 VAA049_259 VAA049_259 280751 281005 - hypothetical protein conserved hypothetical protein gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_259 VAA049_2590 VAA049_2590 panP panP 2868967 2870613 + putative pyridoxal-dependent aspartate 1-decarboxylase NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase~[E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2590 VAA049_2591 VAA049_2591 VAA049_2591 2870921 2871775 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2591 VAA049_2592 VAA049_2592 VAA049_2592 2871866 2873113 - iron-containing alcohol dehydrogenase family protein [C] COG1454 Alcohol dehydrogenase%2C class IV gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2592 VAA049_2593 VAA049_2593 grxA grxA 2873422 2873685 + glutaredoxin%2C GrxA family GRXA: glutaredoxin%2C GrxA family~[O] COG0695 Glutaredoxin and related proteins gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2593 VAA049_2594 VAA049_2594 VAA049_2594 2873887 2875563 + AspT/YidE/YbjL antiporter duplication domain protein yidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain protein~[R] COG2985 Predicted permease gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2594 VAA049_2595 VAA049_2595 clpA clpA 2875633 2877903 - ATP-dependent Clp protease ATP-binding subunit ClpA clpA: ATP-dependent Clp protease ATP-binding subunit ClpA~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2595 VAA049_2596 VAA049_2596 VAA049_2596 2877942 2878262 - ATP-dependent Clp protease adaptor ClpS family protein [S] COG2127 Uncharacterized conserved protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2596 VAA049_2597 VAA049_2597 cspD cspD 2878735 2878956 + cold shock domain protein CspD cspD: cold shock domain protein CspD~[K] COG1278 Cold shock proteins gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2597 VAA049_2598 VAA049_2598 VAA049_2598 2879055 2881280 - isocitrate dehydrogenase%2C NADP-dependent monomer_idh: isocitrate dehydrogenase%2C NADP-dependent~[C] COG2838 Monomeric isocitrate dehydrogenase gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2598 VAA049_2599 VAA049_2599 VAA049_2599 2881590 2882315 + pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2599 VAA049_26 VAA049_26 VAA049_26 28798 29064 - hypothetical protein conserved hypothetical protein~[S] COG3084 Uncharacterized protein conserved in bacteria gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_26 VAA049_260 VAA049_260 VAA049_260 281221 282675 - pyridine nucleotide-disulfide oxidoreductase family protein [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_260 VAA049_2600 VAA049_2600 hisE hisE 2882515 2883147 - phosphoribosyl-ATP diphosphatase histidine_hisI: phosphoribosyl-ATP diphosphatase~[E] COG0139 Phosphoribosyl-AMP cyclohydrolase gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2600 VAA049_2601 VAA049_2601 hisF hisF 2883144 2883917 - imidazoleglycerol phosphate synthase%2C cyclase subunit hisF: imidazoleglycerol phosphate synthase%2C cyclase subunit~[E] COG0107 Imidazoleglycerol-phosphate synthase gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2601 VAA049_2602 VAA049_2602 hisA hisA 2883899 2884636 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2602 VAA049_2603 VAA049_2603 hisH hisH 2884679 2885290 - imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit IMP_synth_hisH: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~[E] COG0118 Glutamine amidotransferase gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2603 VAA049_2604 VAA049_2604 hisB hisB 2885290 2886363 - histidinol-phosphatase hisB_Nterm: histidinol-phosphatase~[E] COG0131 Imidazoleglycerol-phosphate dehydratase gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2604 VAA049_2605 VAA049_2605 hisC hisC 2886415 2887455 - histidinol-phosphate transaminase hisC: histidinol-phosphate transaminase~[E] COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2605 VAA049_2606 VAA049_2606 hisD hisD 2887459 2888754 - histidinol dehydrogenase hisD: histidinol dehydrogenase~[E] COG0141 Histidinol dehydrogenase gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2606 VAA049_2607 VAA049_2607 hisG hisG 2888759 2889655 - ATP phosphoribosyltransferase hisG: ATP phosphoribosyltransferase~[E] COG0040 ATP phosphoribosyltransferase gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2607 VAA049_2608 VAA049_2608 VAA049_2608 2890064 2891665 - na+/H+ antiporter family protein [C] COG1757 Na+/H+ antiporter gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2608 VAA049_2609 VAA049_2609 VAA049_2609 2892359 2892766 + DNA-binding protein H-NS [R] COG2916 DNA-binding protein H-NS gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2609 VAA049_261 VAA049_261 VAA049_261 282747 283478 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0678 Peroxiredoxin gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_261 VAA049_2610 VAA049_2610 VAA049_2610 2892814 2894118 - pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2610 VAA049_2611 VAA049_2611 trmU trmU 2894383 2895498 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~[J] COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase%2C contains the PP-loop ATPase domain gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2611 VAA049_2612 VAA049_2612 VAA049_2612 2895521 2896138 + hypothetical protein conserved hypothetical protein~[R] COG2915 Uncharacterized protein involved in purine metabolism gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2612 VAA049_2613 VAA049_2613 purB purB 2896196 2897566 + adenylosuccinate lyase purB: adenylosuccinate lyase~[F] COG0015 Adenylosuccinate lyase gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2613 VAA049_2614 VAA049_2614 VAA049_2614 2897657 2898184 - hypothetical protein conserved hypothetical protein gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2614 VAA049_2615 VAA049_2615 VAA049_2615 2898181 2898717 - hypothetical protein conserved hypothetical protein gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2615 VAA049_2616 VAA049_2616 VAA049_2616 2898680 2899219 - hypothetical protein conserved hypothetical protein gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2616 VAA049_2617 VAA049_2617 VAA049_2617 2899222 2900463 - methyltransferase small domain protein [M] COG2230 Cyclopropane fatty acid synthase and related methyltransferases gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2617 VAA049_2618 VAA049_2618 VAA049_2618 2900453 2901262 - hypothetical protein conserved hypothetical protein~[S] COG3496 Uncharacterized conserved protein gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2618 VAA049_2619 VAA049_2619 VAA049_2619 2901262 2902539 - flavin containing amine oxidoreductase family protein [R] COG2907 Predicted NAD/FAD-binding protein gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2619 VAA049_262 VAA049_262 VAA049_262 283618 284511 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_262 VAA049_2620 VAA049_2620 VAA049_2620 2902553 2903278 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2620 VAA049_2621 VAA049_2621 VAA049_2621 2903275 2903694 - snoaL-like polyketide cyclase family protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2621 VAA049_2622 VAA049_2622 VAA049_2622 2903913 2904776 - peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2622 VAA049_2623 VAA049_2623 VAA049_2623 2905042 2905212 + putative heat shock protein HtpX gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2623 VAA049_2624 VAA049_2624 bioD bioD 2905293 2905988 - dethiobiotin synthase bioD: dethiobiotin synthase~[H] COG0132 Dethiobiotin synthetase gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2624 VAA049_2625 VAA049_2625 bioC bioC 2905985 2906788 - malonyl-acyl carrier protein O-methyltransferase BioC bioC: malonyl-acyl carrier protein O-methyltransferase BioC~[QR] COG0500 SAM-dependent methyltransferases gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2625 VAA049_2626 VAA049_2626 bioF bioF 2906785 2907939 - 8-amino-7-oxononanoate synthase bioF: 8-amino-7-oxononanoate synthase~[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2626 VAA049_2627 VAA049_2627 bioB bioB 2907923 2908975 - biotin synthase bioB: biotin synthase~[H] COG0502 Biotin synthase and related enzymes gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2627 VAA049_2628 VAA049_2628 bioA bioA 2909108 2910388 + adenosylmethionine-8-amino-7-oxononanoate transaminase bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase~[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2628 VAA049_2629 VAA049_2629 serS serS 2910496 2911803 - serine--tRNA ligase serS: serine--tRNA ligase~[J] COG0172 Seryl-tRNA synthetase gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2629 VAA049_263 VAA049_263 VAA049_263 284587 287064 - penicillin-binding%2C 1A family protein PBP_1a_fam: penicillin-binding%2C 1A family protein~[M] COG5009 Membrane carboxypeptidase/penicillin-binding protein gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_263 VAA049_2630 VAA049_2630 VAA049_2630 2911907 2913256 - sigma-54 interaction domain protein [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2630 VAA049_2631 VAA049_2631 lolA lolA 2913281 2913877 - outer membrane lipocarrier protein LolA lolA: outer membrane lipocarrier protein LolA~[M] COG2834 Outer membrane lipoprotein-sorting protein gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2631 VAA049_2632 VAA049_2632 VAA049_2632 2913973 2914593 - hypothetical protein conserved hypothetical protein~[R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2632 VAA049_2633 VAA049_2633 VAA049_2633 2914759 2915730 + dihydrouridine synthase family protein [J] COG0042 tRNA-dihydrouridine synthase gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2633 VAA049_2634 VAA049_2634 VAA049_2634 2915763 2917232 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2634 VAA049_2635 VAA049_2635 VAA049_2635 2917400 2918194 - ABC transporter family protein [R] COG1101 ABC-type uncharacterized transport system%2C ATPase component gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2635 VAA049_2636 VAA049_2636 VAA049_2636 2918191 2919135 - branched-chain amino acid transport system / permease component family protein [R] COG4120 ABC-type uncharacterized transport system%2C permease component gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2636 VAA049_2637 VAA049_2637 VAA049_2637 2919250 2920215 - ABC transporter substrate binding family protein [R] COG2984 ABC-type uncharacterized transport system%2C periplasmic component gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2637 VAA049_2638 VAA049_2638 VAA049_2638 2920782 2921192 + hypothetical protein conserved hypothetical protein~[S] COG4628 Uncharacterized conserved protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2638 VAA049_2639 VAA049_2639 VAA049_2639 2921315 2921767 - hypothetical protein conserved hypothetical protein~[S] COG3092 Uncharacterized protein conserved in bacteria gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2639 VAA049_264 VAA049_264 VAA049_264 287207 288223 + type IV pilus assembly PilM family protein pilM: type IV pilus assembly PilM family protein~[NU] COG4972 Tfp pilus assembly protein%2C ATPase PilM gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_264 VAA049_2640 VAA049_2640 ackA ackA 2922119 2923315 + acetate kinase ackA: acetate kinase~[C] COG0282 Acetate kinase gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2640 VAA049_2641 VAA049_2641 pta pta 2923451 2925595 + phosphate acetyltransferase pta: phosphate acetyltransferase~[C] COG0280 Phosphotransacetylase gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2641 VAA049_2642 VAA049_2642 VAA049_2642 2925819 2926766 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0435 Predicted glutathione S-transferase gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2642 VAA049_2643 VAA049_2643 VAA049_2643 2926916 2927908 - ABC transporter family protein pseudogene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2643 VAA049_2645 VAA049_2645 VAA049_2645 2927905 2928876 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2645 VAA049_2646 VAA049_2646 VAA049_2646 2928904 2929806 - binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2646 VAA049_2647 VAA049_2647 VAA049_2647 2929820 2930740 - binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2647 VAA049_2648 VAA049_2648 VAA049_2648 2930889 2932520 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2648 VAA049_2649 VAA049_2649 VAA049_2649 2933144 2933956 + ABC transporter%2C phosphonate%2C periplasmic substrate-binding family protein [P] COG3221 ABC-type phosphate/phosphonate transport system%2C periplasmic component gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2649 VAA049_265 VAA049_265 VAA049_265 288213 288797 + fimbrial assembly family protein [NU] COG3166 Tfp pilus assembly protein PilN gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_265 VAA049_2650 VAA049_2650 VAA049_2650 2933960 2935564 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2650 VAA049_2651 VAA049_2651 VAA049_2651 2935580 2936917 - response regulator [KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2651 VAA049_2652 VAA049_2652 VAA049_2652 2936940 2938550 - response regulator [T] COG2200 FOG: EAL domain gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2652 VAA049_2653 VAA049_2653 VAA049_2653 2938550 2939854 - his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2653 VAA049_2654 VAA049_2654 VAA049_2654 2939866 2941185 - sensory box sensor histidine kinase [T] COG0642 Signal transduction histidine kinase gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2654 VAA049_2655 VAA049_2655 VAA049_2655 2941196 2941780 - cheC-like family protein [NT] COG1776 Chemotaxis protein CheC%2C inhibitor of MCP methylation gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2655 VAA049_2656 VAA049_2656 VAA049_2656 2941777 2942142 - response regulator [T] COG0784 FOG: CheY-like receiver gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2656 VAA049_2657 VAA049_2657 VAA049_2657 2942177 2943319 - response regulator [T] COG1639 Predicted signal transduction protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2657 VAA049_2658 VAA049_2658 VAA049_2658 2943316 2943681 - hpt domain protein [T] COG2198 FOG: HPt domain gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2658 VAA049_2659 VAA049_2659 VAA049_2659 2943927 2944913 + tRNA threonylcarbamoyl adenosine modification protein%2C Sua5/YciO/YrdC/YwlC family [J] COG0009 Putative translation factor (SUA5) gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2659 VAA049_266 VAA049_266 VAA049_266 288790 289380 + pilus assembly%2C PilO family protein [NU] COG3167 Tfp pilus assembly protein PilO gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_266 VAA049_2660 VAA049_2660 VAA049_2660 2945177 2945665 + hypothetical protein conserved hypothetical protein gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2660 VAA049_2661 VAA049_2661 VAA049_2661 2945714 2946502 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2661 VAA049_2662 VAA049_2662 VAA049_2662 2946515 2947057 - phosphatidylethanolamine-binding family protein [R] COG1881 Phospholipid-binding protein gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2662 VAA049_2663 VAA049_2663 VAA049_2663 2947488 2948318 + CAAX protease self-immunity family protein [R] COG1266 Predicted metal-dependent membrane protease gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2663 VAA049_2664 VAA049_2664 VAA049_2664 2948408 2951587 - carbohydrate binding domain protein gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2664 VAA049_2665 VAA049_2665 VAA049_2665 2952238 2953467 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2665 VAA049_2666 VAA049_2666 VAA049_2666 2953512 2954009 - cyclin-dependent kinase inhibitor 3 family protein [T] COG2453 Predicted protein-tyrosine phosphatase gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2666 VAA049_2667 VAA049_2667 gap gap 2954023 2955024 - glyceraldehyde-3-phosphate dehydrogenase%2C type I GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase%2C type I~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2667 VAA049_2668 VAA049_2668 VAA049_2668 2955121 2955462 - bacterial regulatory%2C arsR family protein [K] COG0640 Predicted transcriptional regulators gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2668 VAA049_2669 VAA049_2669 VAA049_2669 2956251 2957615 - potassium uptake%2C TrkH family protein 2a38: potassium uptake%2C TrkH family protein~[P] COG0168 Trk-type K+ transport systems%2C membrane components gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2669 VAA049_267 VAA049_267 VAA049_267 289370 289888 + pilus assembly%2C PilP family protein [NU] COG3168 Tfp pilus assembly protein PilP gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_267 VAA049_2670 VAA049_2670 VAA049_2670 2957617 2958270 - trkA-N domain protein [P] COG0569 K+ transport systems%2C NAD-binding component gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2670 VAA049_2671 VAA049_2671 VAA049_2671 2958284 2959707 - trkH2%3Bcation transport family protein%3Btrk system potassium uptake TrkH domain protein pseudogene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2671 VAA049_2673 VAA049_2673 VAA049_2673 2959736 2960434 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2673 VAA049_2674 VAA049_2674 VAA049_2674 2960437 2961459 - his Kinase A domain protein [T] COG2205 Osmosensitive K+ channel histidine kinase gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2674 VAA049_2675 VAA049_2675 VAA049_2675 2961704 2962780 - cytochrome C biogenesis transmembrane region family protein [R] COG2215 ABC-type uncharacterized transport system%2C permease component gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2675 VAA049_2676 VAA049_2676 rcnR rcnR 2962914 2963186 + transcriptional repressor rcnR [S] COG1937 Uncharacterized protein conserved in bacteria gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2676 VAA049_2677 VAA049_2677 VAA049_2677 2963502 2964542 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2677 VAA049_2678 VAA049_2678 VAA049_2678 2964624 2965655 - hypothetical protein conserved hypothetical protein gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2678 VAA049_2679 VAA049_2679 accD accD 2965737 2966603 - acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit accD: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~[I] COG0777 Acetyl-CoA carboxylase beta subunit gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2679 VAA049_268 VAA049_268 pilQ pilQ 289914 291629 + type IV pilus secretin PilQ family protein IV_pilus_PilQ: type IV pilus secretin PilQ family protein~[U] COG4796 Type II secretory pathway%2C component HofQ gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_268 VAA049_2680 VAA049_2680 VAA049_2680 2966714 2967619 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2680 VAA049_2681 VAA049_2681 cas6f cas6f 2968118 2968756 - CRISPR-associated endoribonuclease Cas6/Csy4%2C subtype I-F/YPEST cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4%2C subtype I-F/YPEST gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2681 VAA049_2682 VAA049_2682 VAA049_2682 2969006 2969923 + transposase DDE domain protein gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2682 VAA049_2683 VAA049_2683 VAA049_2683 2970097 2970945 - integrase core domain protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2683 VAA049_2684 VAA049_2684 VAA049_2684 2971425 2971967 - hypothetical protein tnsA endonuclease N terminal family protein gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2684 VAA049_2685 VAA049_2685 VAA049_2685 2972354 2974375 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2685 VAA049_2686 VAA049_2686 VAA049_2686 2974522 2975265 - putative membrane protein gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2686 VAA049_2687 VAA049_2687 VAA049_2687 2975316 2975618 + 6-O-methylguanine DNA methyltransferase%2C DNA binding domain protein [L] COG3695 Predicted methylated DNA-protein cysteine methyltransferase gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2687 VAA049_2688 VAA049_2688 VAA049_2688 2975672 2976103 - type III secretion system lipochaperone family protein [S] COG3126 Uncharacterized protein conserved in bacteria gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2688 VAA049_2689 VAA049_2689 tesB tesB 2976254 2977114 + acyl-CoA thioesterase II tesB: acyl-CoA thioesterase II~[I] COG1946 Acyl-CoA thioesterase gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2689 VAA049_269 VAA049_269 VAA049_269 291816 292340 + adenylylsulfate kinase family protein [E] COG0703 Shikimate kinase gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_269 VAA049_2690 VAA049_2690 VAA049_2690 2977123 2977581 - asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2690 VAA049_2691 VAA049_2691 VAA049_2691 2977703 2978770 + pyridoxal-phosphate dependent enzyme family protein [E] COG0031 Cysteine synthase gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2691 VAA049_2692 VAA049_2692 VAA049_2692 2978895 2979956 - peptidase S49 family protein [OU] COG0616 Periplasmic serine proteases (ClpP class) gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2692 VAA049_2693 VAA049_2693 VAA049_2693 2980115 2980858 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2693 VAA049_2694 VAA049_2694 VAA049_2694 2980952 2981389 - putative zinc-/iron-chelating domain protein [S] COG2983 Uncharacterized conserved protein gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2694 VAA049_2695 VAA049_2695 VAA049_2695 2981531 2981779 + putative zinc-/iron-chelating domain protein [R] COG0727 Predicted Fe-S-cluster oxidoreductase gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2695 VAA049_2696 VAA049_2696 recR recR 2981888 2982490 - recombination protein RecR recR: recombination protein RecR~[L] COG0353 Recombinational DNA repair protein (RecF pathway) gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2696 VAA049_2697 VAA049_2697 VAA049_2697 2982505 2982834 - DNA-binding protein%2C YbaB/EbfC family DNA_YbaB_EbfC: DNA-binding protein%2C YbaB/EbfC family~[S] COG0718 Uncharacterized protein conserved in bacteria gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2697 VAA049_2698 VAA049_2698 dnaX dnaX 2982905 2984983 - DNA polymerase III%2C subunit gamma and tau dnaX_nterm: DNA polymerase III%2C subunit gamma and tau~[L] COG2812 DNA polymerase III%2C gamma/tau subunits gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2698 VAA049_2699 VAA049_2699 apt apt 2985002 2985547 - adenine phosphoribosyltransferase apt: adenine phosphoribosyltransferase~[F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2699 VAA049_27 VAA049_27 VAA049_27 29625 30416 + spoOM family protein [R] COG4326 Sporulation control protein gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_27 VAA049_270 VAA049_270 aroB aroB 292368 293453 + 3-dehydroquinate synthase aroB: 3-dehydroquinate synthase~[E] COG0337 3-dehydroquinate synthetase gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_270 VAA049_2700 VAA049_2700 VAA049_2700 2985679 2986077 - hypothetical protein conserved hypothetical protein~[S] COG2832 Uncharacterized protein conserved in bacteria gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2700 VAA049_2701 VAA049_2701 VAA049_2701 2986077 2986208 - putative membrane protein gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2701 VAA049_2702 VAA049_2702 VAA049_2702 2986378 2987469 - response regulator [T] COG0784 FOG: CheY-like receiver gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2702 VAA049_2703 VAA049_2703 VAA049_2703 2987717 2988592 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2703 VAA049_2704 VAA049_2704 VAA049_2704 2988669 2989217 - nitroreductase family protein [C] COG0778 Nitroreductase gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2704 VAA049_2705 VAA049_2705 fadJ fadJ 2989344 2991470 - fatty oxidation complex%2C alpha subunit FadJ fadJ: fatty oxidation complex%2C alpha subunit FadJ~[I] COG1250 3-hydroxyacyl-CoA dehydrogenase gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2705 VAA049_2706 VAA049_2706 fadI fadI 2991470 2992777 - acetyl-CoA C-acyltransferase FadI fadI: acetyl-CoA C-acyltransferase FadI~[I] COG0183 Acetyl-CoA acetyltransferase gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2706 VAA049_2707 VAA049_2707 VAA049_2707 2993301 2993864 + RNA polymerase sigma factor%2C sigma-70 family protein sigma70-ECF: RNA polymerase sigma factor%2C sigma-70 family protein~[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2707 VAA049_2708 VAA049_2708 VAA049_2708 2993857 2994588 + hypothetical protein conserved hypothetical protein gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2708 VAA049_2709 VAA049_2709 VAA049_2709 2994848 2996125 + outer membrane transport family protein [I] COG2067 Long-chain fatty acid transport protein gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2709 VAA049_271 VAA049_271 VAA049_271 293508 294983 + AAA domain protein [U] COG3267 Type II secretory pathway%2C component ExeA (predicted ATPase) gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_271 VAA049_2710 VAA049_2710 VAA049_2710 2996428 2997699 + hypothetical protein conserved hypothetical protein~[I] COG2067 Long-chain fatty acid transport protein gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2710 VAA049_2711 VAA049_2711 VAA049_2711 2997726 2998193 - low molecular weight phosphotyrosine phosphatase family protein [T] COG0394 Protein-tyrosine-phosphatase gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2711 VAA049_2712 VAA049_2712 cobO cobO 2998279 2998884 + cob(I)yrinic acid a%2Cc-diamide adenosyltransferase cobA: cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~[H] COG2109 ATP:corrinoid adenosyltransferase gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2712 VAA049_2713 VAA049_2713 VAA049_2713 2999051 2999854 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2713 VAA049_2714 VAA049_2714 VAA049_2714 3000169 3002280 - asmA family protein [M] COG2982 Uncharacterized protein involved in outer membrane biogenesis gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2714 VAA049_2715 VAA049_2715 udk udk 3002378 3003019 - uridine kinase udk: uridine kinase~[F] COG0572 Uridine kinase gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2715 VAA049_2716 VAA049_2716 VAA049_2716 3003196 3004272 - 4Fe-4S iron sulfur cluster binding s%2C NifH/frxC family protein [D] COG0489 ATPases involved in chromosome partitioning gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2716 VAA049_2717 VAA049_2717 metG metG 3004430 3006481 + methionine--tRNA ligase metG: methionine--tRNA ligase~[J] COG0143 Methionyl-tRNA synthetase gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2717 VAA049_2718 VAA049_2718 VAA049_2718 3006784 3007599 + hypothetical protein conserved hypothetical protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2718 VAA049_2719 VAA049_2719 udp udp 3007672 3008433 - uridine phosphorylase uridine-psphlse: uridine phosphorylase~[F] COG2820 Uridine phosphorylase gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2719 VAA049_272 VAA049_272 dam dam 295053 295886 + DNA adenine methylase family protein dam: DNA adenine methylase family protein~[L] COG0338 Site-specific DNA methylase gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_272 VAA049_2720 VAA049_2720 cadA cadA 3008899 3011205 - cadmium-translocating P-type ATPase ATPase-IB2_Cd: cadmium-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2720 VAA049_2721 VAA049_2721 VAA049_2721 3011318 3011734 - CBS domain protein [R] COG0517 FOG: CBS domain gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2721 VAA049_2722 VAA049_2722 VAA049_2722 3011963 3012937 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2722 VAA049_2723 VAA049_2723 VAA049_2723 3012943 3013404 - moaE family protein [H] COG0314 Molybdopterin converting factor%2C large subunit gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2723 VAA049_2724 VAA049_2724 moaD moaD 3013406 3013651 - molybdopterin converting factor%2C subunit 1 moaD: molybdopterin converting factor%2C subunit 1~[H] COG1977 Molybdopterin converting factor%2C small subunit gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2724 VAA049_2725 VAA049_2725 moaC moaC 3013648 3014127 - molybdenum cofactor biosynthesis protein C moaC: molybdenum cofactor biosynthesis protein C~[H] COG0315 Molybdenum cofactor biosynthesis enzyme gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2725 VAA049_2726 VAA049_2726 moaB moaB 3014138 3014650 - molybdenum cofactor biosynthesis protein B moaB_proteo: molybdenum cofactor biosynthesis protein B~[H] COG0521 Molybdopterin biosynthesis enzymes gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2726 VAA049_2727 VAA049_2727 moaA moaA 3014710 3015699 - molybdenum cofactor biosynthesis protein A moaA: molybdenum cofactor biosynthesis protein A~[H] COG2896 Molybdenum cofactor biosynthesis enzyme gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2727 VAA049_2728 VAA049_2728 luxU luxU 3016885 3017226 - phosphorelay protein luxU gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2728 VAA049_2729 VAA049_2729 VAA049_2729 3016006 3016896 + hypothetical protein cofD_related: conserved hypothetical family protein~[S] COG0391 Uncharacterized conserved protein gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2729 VAA049_273 VAA049_273 rpe rpe 296013 296687 + ribulose-phosphate 3-epimerase rpe: ribulose-phosphate 3-epimerase~[G] COG0036 Pentose-5-phosphate-3-epimerase gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_273 VAA049_2730 VAA049_2730 luxO luxO 3017230 3018639 - regulatory protein luxO [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2730 VAA049_2731 VAA049_2731 uvrB uvrB 3019028 3021058 - excinuclease ABC subunit B uvrb: excinuclease ABC subunit B~[L] COG0556 Helicase subunit of the DNA excision repair complex gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2731 VAA049_2732 VAA049_2732 VAA049_2732 3021645 3021720 + tRNA-Asn tRNA gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2732 VAA049_2733 VAA049_2733 VAA049_2733 3021940 3022521 + electron transport complex%2C RnfABCDGE type%2C A subunit rnfA: electron transport complex%2C RnfABCDGE type%2C A subunit~[C] COG4657 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfA gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2733 VAA049_2734 VAA049_2734 VAA049_2734 3022521 3023108 + electron transport complex%2C RnfABCDGE type%2C B subunit rnfB: electron transport complex%2C RnfABCDGE type%2C B subunit~[C] COG2878 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfB gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2734 VAA049_2735 VAA049_2735 VAA049_2735 3023117 3025438 + electron transport complex%2C RnfABCDGE type%2C C subunit rnfC: electron transport complex%2C RnfABCDGE type%2C C subunit~[C] COG4656 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfC gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2735 VAA049_2736 VAA049_2736 VAA049_2736 3025438 3026484 + electron transport complex%2C RnfABCDGE type%2C D subunit rnfD: electron transport complex%2C RnfABCDGE type%2C D subunit~[C] COG4658 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfD gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2736 VAA049_2737 VAA049_2737 VAA049_2737 3026496 3027125 + electron transport complex%2C RnfABCDGE type%2C G subunit rnfG: electron transport complex%2C RnfABCDGE type%2C G subunit~[C] COG4659 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfG gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2737 VAA049_2738 VAA049_2738 VAA049_2738 3027127 3027819 + electron transport complex%2C RnfABCDGE type%2C E subunit rnfE: electron transport complex%2C RnfABCDGE type%2C E subunit~[C] COG4660 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfE gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2738 VAA049_2739 VAA049_2739 nth nth 3027846 3028487 + endonuclease III nth: endonuclease III~[L] COG0177 Predicted EndoIII-related endonuclease gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2739 VAA049_274 VAA049_274 gph gph 296707 297387 + phosphoglycolate phosphatase%2C bacterial PGP_bact: phosphoglycolate phosphatase%2C bacterial~[R] COG0546 Predicted phosphatases gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_274 VAA049_2740 VAA049_2740 gloA gloA 3028528 3028944 + lactoylglutathione lyase glyox_I: lactoylglutathione lyase~[E] COG0346 Lactoylglutathione lyase and related lyases gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2740 VAA049_2741 VAA049_2741 VAA049_2741 3029107 3029544 + hypothetical protein conserved hypothetical protein gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2741 VAA049_2742 VAA049_2742 motY motY 3029593 3030477 - component of sodium-driven polar flagellar motor [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2742 VAA049_2743 VAA049_2743 rnt rnt 3030751 3031425 + ribonuclease T RNaseT: ribonuclease T~[L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2743 VAA049_2744 VAA049_2744 VAA049_2744 3031526 3032851 + gntP permease family protein [R] COG2056 Predicted permease gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2744 VAA049_2745 VAA049_2745 purF purF 3032979 3034493 - amidophosphoribosyltransferase purF: amidophosphoribosyltransferase~[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2745 VAA049_2746 VAA049_2746 VAA049_2746 3034526 3035017 - colicin V production family protein [R] COG1286 Uncharacterized membrane protein%2C required for colicin V production gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2746 VAA049_2747 VAA049_2747 VAA049_2747 3035080 3035676 - sporulation related domain protein [S] COG3147 Uncharacterized protein conserved in bacteria gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2747 VAA049_2748 VAA049_2748 folC folC 3035677 3036942 - bifunctional FolC family protein folC: bifunctional FolC family protein~[H] COG0285 Folylpolyglutamate synthase gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2748 VAA049_2749 VAA049_2749 accD accD 3036987 3037913 - acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit accD: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~[I] COG0777 Acetyl-CoA carboxylase beta subunit gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2749 VAA049_275 VAA049_275 trpS trpS 297515 298531 + tryptophan--tRNA ligase trpS: tryptophan--tRNA ligase~[J] COG0180 Tryptophanyl-tRNA synthetase gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_275 VAA049_2750 VAA049_2750 truA truA 3038087 3038881 - tRNA pseudouridine(38-40) synthase hisT_truA: tRNA pseudouridine(38-40) synthase~[J] COG0101 Pseudouridylate synthase gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2750 VAA049_2751 VAA049_2751 fimV fimV 3039003 3043805 - FimV fimV_core: FimV N-terminal domain gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2751 VAA049_2752 VAA049_2752 glnS glnS 3044033 3045703 - glutamine--tRNA ligase glnS: glutamine--tRNA ligase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2752 VAA049_2753 VAA049_2753 nagE nagE 3045951 3047522 - PTS system%2C N-acetylglucosamine-specific IIBC component PTS-II-BC-nag: PTS system%2C N-acetylglucosamine-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2753 VAA049_2754 VAA049_2754 nagA nagA 3047991 3049127 + N-acetylglucosamine-6-phosphate deacetylase nagA: N-acetylglucosamine-6-phosphate deacetylase~[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2754 VAA049_2755 VAA049_2755 VAA049_2755 3049130 3050344 + marR family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2755 VAA049_2756 VAA049_2756 VAA049_2756 3050439 3052025 + trkA-N domain protein [P] COG4651 Kef-type K+ transport system%2C predicted NAD-binding component gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2756 VAA049_2757 VAA049_2757 asnB asnB 3052221 3053885 + asparagine synthase asn_synth_AEB: asparagine synthase~[E] COG0367 Asparagine synthase (glutamine-hydrolyzing) gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2757 VAA049_2758 VAA049_2758 rfaH rfaH 3054047 3054412 - transcription elongation factor/antiterminator RfaH rfaH: transcription elongation factor/antiterminator RfaH~[K] COG0250 Transcription antiterminator gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2758 VAA049_2759 VAA049_2759 VAA049_2759 3055052 3056533 + amino acid/peptide transporter family protein yjdL_sub1_fam: amino acid/peptide transporter family protein~[E] COG3104 Dipeptide/tripeptide permease gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2759 VAA049_276 VAA049_276 VAA049_276 298697 299461 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_276 VAA049_2760 VAA049_2760 hemH hemH 3056631 3057593 - ferrochelatase hemH: ferrochelatase~[H] COG0276 Protoheme ferro-lyase (ferrochelatase) gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2760 VAA049_2761 VAA049_2761 VAA049_2761 3057720 3058364 - adenylate kinase family protein adk: adenylate kinase family protein~[F] COG0563 Adenylate kinase and related kinases gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2761 VAA049_2762 VAA049_2762 VAA049_2762 3058696 3060603 - hsp90 family protein [O] COG0326 Molecular chaperone%2C HSP90 family gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2762 VAA049_2763 VAA049_2763 VAA049_2763 3060867 3061715 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2763 VAA049_2764 VAA049_2764 toxS toxS 3061725 3062246 + transmembrane regulatory protein toxS gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2764 VAA049_2765 VAA049_2765 VAA049_2765 3062287 3062580 + selT/selW/selH selenodomain protein CXXU_selWTH: selT/selW/selH selenodomain protein~[O] COG3526 Uncharacterized protein conserved in bacteria gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2765 VAA049_2766 VAA049_2766 VAA049_2766 3062661 3063209 - phosphodiesterase%2C family protein yfcE: phosphodiesterase%2C MJ0936 family protein~[R] COG0622 Predicted phosphoesterase gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2766 VAA049_2767 VAA049_2767 VAA049_2767 3063623 3064537 + rmlD substrate binding domain protein [R] COG1090 Predicted nucleoside-diphosphate sugar epimerase gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2767 VAA049_2768 VAA049_2768 VAA049_2768 3064580 3065407 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2768 VAA049_2769 VAA049_2769 VAA049_2769 3065836 3066690 + thioredoxin family protein [O] COG3118 Thioredoxin domain-containing protein gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2769 VAA049_277 VAA049_277 VAA049_277 299731 302340 + endonuclease/Exonuclease/phosphatase family protein [R] COG2374 Predicted extracellular nuclease gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_277 VAA049_2770 VAA049_2770 VAA049_2770 3067121 3068041 + SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2770 VAA049_2771 VAA049_2771 VAA049_2771 3068049 3068498 + hypothetical protein nfeD-like C-terminal%2C partner-binding family protein~[OU] COG1585 Membrane protein implicated in regulation of membrane protease activity gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2771 VAA049_2772 VAA049_2772 cueR cueR 3068542 3068961 - Cu(I)-responsive transcriptional regulator cueR: Cu(I)-responsive transcriptional regulator~[K] COG0789 Predicted transcriptional regulators gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2772 VAA049_2773 VAA049_2773 VAA049_2773 3069022 3069834 - hypothetical protein conserved hypothetical protein gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2773 VAA049_2774 VAA049_2774 VAA049_2774 3069914 3070957 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2774 VAA049_2775 VAA049_2775 ligA ligA 3071589 3073598 - DNA ligase%2C NAD-dependent dnlj: DNA ligase%2C NAD-dependent~[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2775 VAA049_2776 VAA049_2776 zipA zipA 3073731 3074591 - cell division protein ZipA septum_zipA: cell division protein ZipA~[D] COG3115 Cell division protein gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2776 VAA049_2777 VAA049_2777 VAA049_2777 3074821 3075573 + etoposide-induced 2.4 family protein [E] COG2981 Uncharacterized protein involved in cysteine biosynthesis gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2777 VAA049_2778 VAA049_2778 cysK cysK 3075696 3076664 + cysteine synthase A cysK: cysteine synthase A~[E] COG0031 Cysteine synthase gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2778 VAA049_2779 VAA049_2779 ptsH ptsH 3076962 3077219 + phosphocarrier protein HPr [G] COG1925 Phosphotransferase system%2C HPr-related proteins gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2779 VAA049_278 VAA049_278 rimO rimO 302414 303826 - ribosomal protein S12 methylthiotransferase RimO [J] COG0621 2-methylthioadenine synthetase gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_278 VAA049_2780 VAA049_2780 ptsP ptsP 3077353 3079074 + phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2780 VAA049_2781 VAA049_2781 crr crr 3079183 3079692 + glucose-specific phosphotransferase enzyme IIA component [G] COG2190 Phosphotransferase system IIA components gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2781 VAA049_2782 VAA049_2782 VAA049_2782 3079817 3080980 - ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein ubi-OHases: ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2782 VAA049_2783 VAA049_2783 miaB miaB 3081234 3082658 + tRNA-i(6)A37 thiotransferase enzyme MiaB miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB~[J] COG0621 2-methylthioadenine synthetase gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2783 VAA049_2784 VAA049_2784 VAA049_2784 3082726 3083829 + phoH-like family protein [T] COG1702 Phosphate starvation-inducible protein PhoH%2C predicted ATPase gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2784 VAA049_2785 VAA049_2785 VAA049_2785 3083826 3084290 + putative rRNA maturation factor YbeY [R] COG0319 Predicted metal-dependent hydrolase gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2785 VAA049_2786 VAA049_2786 VAA049_2786 3084360 3085235 + CBS domain protein [P] COG4535 Putative Mg2+ and Co2+ transporter CorC gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2786 VAA049_2787 VAA049_2787 lnt lnt 3085276 3086793 + apolipoprotein N-acyltransferase lnt: apolipoprotein N-acyltransferase~[M] COG0815 Apolipoprotein N-acyltransferase gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2787 VAA049_2788 VAA049_2788 VAA049_2788 3086849 3087319 - hypothetical protein conserved hypothetical protein gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2788 VAA049_2789 VAA049_2789 leuS leuS 3087449 3090025 + leucine--tRNA ligase leuS_bact: leucine--tRNA ligase~[J] COG0495 Leucyl-tRNA synthetase gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2789 VAA049_279 VAA049_279 VAA049_279 304080 304661 + glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein trpG_papA: glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein~[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_279 VAA049_2790 VAA049_2790 VAA049_2790 3090202 3090816 + lipopolysaccharide-assembly family protein [M] COG2980 Rare lipoprotein B gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2790 VAA049_2791 VAA049_2791 holA holA 3090822 3091850 + DNA polymerase III%2C delta subunit holA: DNA polymerase III%2C delta subunit~[L] COG1466 DNA polymerase III%2C delta subunit gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2791 VAA049_2792 VAA049_2792 rsfS rsfS 3091919 3092236 + ribosome silencing factor rsfS_iojap_ybeB: ribosome silencing factor~[S] COG0799 Uncharacterized homolog of plant Iojap protein gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2792 VAA049_2793 VAA049_2793 rlmH rlmH 3092239 3092709 + rRNA large subunit m3Psi methyltransferase RlmH tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH~[S] COG1576 Uncharacterized conserved protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2793 VAA049_2794 VAA049_2794 mrdA mrdA 3092716 3094632 + penicillin-binding protein 2 pbp2_mrdA: penicillin-binding protein 2~[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2794 VAA049_2795 VAA049_2795 mrdB mrdB 3094629 3095750 + rod shape-determining protein RodA rodA_shape: rod shape-determining protein RodA~[D] COG0772 Bacterial cell division membrane protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2795 VAA049_2796 VAA049_2796 rlpA rlpA 3095750 3096541 + rare lipoA family protein rlpA: rare lipoA family protein~[M] COG0797 Lipoproteins gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2796 VAA049_2797 VAA049_2797 VAA049_2797 3096633 3097808 + D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2797 VAA049_2798 VAA049_2798 VAA049_2798 3097973 3099358 + transposase Tn5 dimerization domain protein gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2798 VAA049_2799 VAA049_2799 VAA049_2799 3099462 3099740 + hypothetical protein conserved hypothetical protein~[S] COG2921 Uncharacterized conserved protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2799 VAA049_28 VAA049_28 VAA049_28 30500 31141 + channel%2C hemolysin III family protein hlyIII: channel%2C hemolysin III family protein~[R] COG1272 Predicted membrane protein%2C hemolysin III homolog gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_28 VAA049_280 VAA049_280 astC astC 305059 306270 + succinylornithine transaminase family protein arg_catab_astC: succinylornithine transaminase family protein~[E] COG4992 Ornithine/acetylornithine aminotransferase gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_280 VAA049_2800 VAA049_2800 lipB lipB 3099928 3100578 + lipoyl(octanoyl) transferase lipB: lipoyl(octanoyl) transferase~[H] COG0321 Lipoate-protein ligase B gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2800 VAA049_2801 VAA049_2801 lipA lipA 3100571 3101536 + lipoyl synthase lipA: lipoyl synthase~[H] COG0320 Lipoate synthase gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2801 VAA049_2802 VAA049_2802 VAA049_2802 3101732 3102058 + hypothetical protein conserved hypothetical protein gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2802 VAA049_2803 VAA049_2803 VAA049_2803 3102223 3103473 - beta-eliminating lyase family protein [E] COG0112 Glycine/serine hydroxymethyltransferase gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2803 VAA049_2804 VAA049_2804 VAA049_2804 3103814 3104410 + hypothetical protein conserved hypothetical protein~[S] COG1284 Uncharacterized conserved protein gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2804 VAA049_2805 VAA049_2805 VAA049_2805 3104561 3104995 - vanZ like family protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2805 VAA049_2806 VAA049_2806 VAA049_2806 3104974 3105684 - hypothetical protein conserved hypothetical protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2806 VAA049_2807 VAA049_2807 VAA049_2807 3105681 3107894 - capsular exopolysaccharide family domain protein eps_fam: capsular exopolysaccharide family domain protein~[M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2807 VAA049_2808 VAA049_2808 VAA049_2808 3107919 3108443 - polysaccharide biosynthesis/export family protein [M] COG1596 Periplasmic protein involved in polysaccharide export gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2808 VAA049_2809 VAA049_2809 VAA049_2809 3108450 3109646 - hypothetical protein conserved hypothetical protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2809 VAA049_281 VAA049_281 astA astA 306410 307429 + arginine N-succinyltransferase arg_catab_AstA: arginine N-succinyltransferase~[E] COG3138 Arginine/ornithine N-succinyltransferase beta subunit gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_281 VAA049_2810 VAA049_2810 VAA049_2810 3109717 3111111 - undecaprenyl-phosphate glucose phosphotransferase wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase~[M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2810 VAA049_2811 VAA049_2811 VAA049_2811 3111577 3112176 + hypothetical protein conserved hypothetical protein gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2811 VAA049_2812 VAA049_2812 VAA049_2812 3112352 3113668 + O-Antigen ligase family protein [M] COG3307 Lipid A core - O-antigen ligase and related enzymes gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2812 VAA049_2813 VAA049_2813 VAA049_2813 3113863 3116736 - repeat domain in Vibrio%2C Colwellia%2C Bradyrhizobium and Shewanella family protein gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2813 VAA049_2814 VAA049_2814 VAA049_2814 3117001 3118194 + hypothetical protein conserved hypothetical protein gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2814 VAA049_2815 VAA049_2815 VAA049_2815 3118425 3119216 - hypothetical protein conserved hypothetical protein gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2815 VAA049_2816 VAA049_2816 VAA049_2816 3119437 3120174 - glycosyltransferase%2C WecB/TagA/CpsF family protein wecG_tagA_cpsF: glycosyltransferase%2C WecB/TagA/CpsF family protein~[M] COG1922 Teichoic acid biosynthesis proteins gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2816 VAA049_2817 VAA049_2817 VAA049_2817 3120179 3121342 - hypothetical protein conserved hypothetical protein gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2817 VAA049_2818 VAA049_2818 VAA049_2818 3121339 3122400 - glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2818 VAA049_2819 VAA049_2819 VAA049_2819 3122397 3123545 - sugar-transfer associated ATP-grasp family protein gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2819 VAA049_282 VAA049_282 astD astD 307439 308896 + succinylglutamate-semialdehyde dehydrogenase arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_282 VAA049_2820 VAA049_2820 VAA049_2820 3123553 3124881 - AMP-binding enzyme family protein [H] COG1541 Coenzyme F390 synthetase gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2820 VAA049_2821 VAA049_2821 VAA049_2821 3124941 3126164 - putative membrane protein gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2821 VAA049_2822 VAA049_2822 VAA049_2822 3126161 3127570 - polysaccharide biosynthesis family protein [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2822 VAA049_2823 VAA049_2823 VAA049_2823 3127567 3128724 - glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2823 VAA049_2824 VAA049_2824 VAA049_2824 3128835 3130076 - nucleotide sugar dehydrogenase family protein NDP-sugDHase: nucleotide sugar dehydrogenase family protein~[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2824 VAA049_2825 VAA049_2825 VAA049_2825 3130096 3131214 - UDP-N-acetylglucosamine 2-epimerase wecB: UDP-N-acetylglucosamine 2-epimerase~[M] COG0381 UDP-N-acetylglucosamine 2-epimerase gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2825 VAA049_2826 VAA049_2826 VAA049_2826 3131570 3132028 - low molecular weight phosphotyrosine phosphatase family protein [T] COG0394 Protein-tyrosine-phosphatase gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2826 VAA049_2827 VAA049_2827 VAA049_2827 3132479 3135589 - MMPL family protein [V] COG0841 Cation/multidrug efflux pump gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2827 VAA049_2828 VAA049_2828 VAA049_2828 3135589 3136647 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2828 VAA049_2829 VAA049_2829 VAA049_2829 3136933 3137017 + tRNA-Tyr tRNA gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2829 VAA049_283 VAA049_283 VAA049_283 309039 309830 + hypothetical protein conserved hypothetical protein gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_283 VAA049_2830 VAA049_2830 VAA049_2830 3137103 3137187 + tRNA-Tyr tRNA gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2830 VAA049_2831 VAA049_2831 VAA049_2831 3137272 3137356 + tRNA-Tyr tRNA gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2831 VAA049_2832 VAA049_2832 VAA049_2832 3137441 3137525 + tRNA-Tyr tRNA gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2832 VAA049_2833 VAA049_2833 treC treC 3137704 3139392 - alpha%2Calpha-phosphotrehalase trehalose_treC: alpha%2Calpha-phosphotrehalase~[G] COG0366 Glycosidases gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2833 VAA049_2834 VAA049_2834 treP treP 3139472 3140896 - PTS system%2C trehalose-specific IIBC component PTS-IIBC-Tre: PTS system%2C trehalose-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2834 VAA049_2835 VAA049_2835 treR treR 3141145 3142095 - trehalose operon repressor trehalos_R_Ecol: trehalose operon repressor~[K] COG1609 Transcriptional regulators gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2835 VAA049_2836 VAA049_2836 gmhB gmhB 3142160 3142720 - D%2CD-heptose 1%2C7-bisphosphate phosphatase family protein gmhB_yaeD: D%2CD-heptose 1%2C7-bisphosphate phosphatase family protein~[E] COG0241 Histidinol phosphatase and related phosphatases gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2836 VAA049_2837 VAA049_2837 metN metN 3142956 3143990 + D-methionine ABC transporter%2C ATP-binding protein ABC_MetN: D-methionine ABC transporter%2C ATP-binding protein~[P] COG1135 ABC-type metal ion transport system%2C ATPase component gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2837 VAA049_2838 VAA049_2838 VAA049_2838 3143980 3144657 + binding--dependent transport system inner membrane component family protein [P] COG2011 ABC-type metal ion transport system%2C permease component gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2838 VAA049_2839 VAA049_2839 VAA049_2839 3144694 3145503 + methionine ABC transporter substrate-binding protein [P] COG1464 ABC-type metal ion transport system%2C periplasmic component/surface antigen gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2839 VAA049_284 VAA049_284 VAA049_284 309909 310541 - bacterial regulatory s%2C crp family protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_284 VAA049_2840 VAA049_2840 VAA049_2840 3145636 3146412 - hypothetical protein conserved hypothetical protein~[R] COG5595 Zn-ribbon-containing%2C possibly nucleic-acid-binding protein gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2840 VAA049_2841 VAA049_2841 VAA049_2841 3146414 3146962 - syd family protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2841 VAA049_2842 VAA049_2842 queF queF 3147059 3147904 + queuine synthase queF: queuine synthase~[R] COG0780 Enzyme related to GTP cyclohydrolase I gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2842 VAA049_2843 VAA049_2843 VAA049_2843 3147920 3150181 + tetratricopeptide repeat family protein [R] COG0457 FOG: TPR repeat gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2843 VAA049_2844 VAA049_2844 VAA049_2844 3150292 3151857 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2844 VAA049_2845 VAA049_2845 VAA049_2845 3152077 3153435 + hypothetical protein conserved hypothetical protein~[R] COG1611 Predicted Rossmann fold nucleotide-binding protein gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2845 VAA049_2846 VAA049_2846 VAA049_2846 3153546 3154325 + hypothetical protein 5'-3' exonuclease%2C C-terminal SAM fold family protein~[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI) gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2846 VAA049_2847 VAA049_2847 VAA049_2847 3154445 3154741 - hypothetical protein conserved hypothetical protein~[S] COG2363 Uncharacterized small membrane protein gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2847 VAA049_2848 VAA049_2848 VAA049_2848 3154763 3155683 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2848 VAA049_2849 VAA049_2849 thiI thiI 3156303 3157754 - tRNA sulfurtransferase ThiI [H] COG0301 Thiamine biosynthesis ATP pyrophosphatase gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2849 VAA049_285 VAA049_285 VAA049_285 310784 311653 - phosphoribulokinase / Uridine kinase family protein [C] COG3954 Phosphoribulokinase gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_285 VAA049_2850 VAA049_2850 VAA049_2850 3158058 3159014 - membrane MotB of proton-channel complex MotA/MotB family protein [N] COG1360 Flagellar motor protein gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2850 VAA049_2851 VAA049_2851 VAA049_2851 3159026 3159790 - motA/TolQ/ExbB proton channel family protein [N] COG1291 Flagellar motor component gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2851 VAA049_2852 VAA049_2852 xseB xseB 3160105 3160347 + exodeoxyribonuclease VII%2C small subunit xseB: exodeoxyribonuclease VII%2C small subunit~[L] COG1722 Exonuclease VII small subunit gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2852 VAA049_2853 VAA049_2853 VAA049_2853 3160390 3161274 + geranyltranstransferase [H] COG0142 Geranylgeranyl pyrophosphate synthase gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2853 VAA049_2854 VAA049_2854 dxs dxs 3161294 3163174 + 1-deoxy-D-xylulose-5-phosphate synthase dxs: 1-deoxy-D-xylulose-5-phosphate synthase~[HI] COG1154 Deoxyxylulose-5-phosphate synthase gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2854 VAA049_2855 VAA049_2855 VAA049_2855 3163269 3164006 - RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2855 VAA049_2856 VAA049_2856 VAA049_2856 3164007 3164318 - tRNA pseudouridine synthase C family protein [S] COG3098 Uncharacterized protein conserved in bacteria gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2856 VAA049_2857 VAA049_2857 VAA049_2857 3164407 3165444 + hypothetical protein conserved hypothetical protein gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2857 VAA049_2858 VAA049_2858 VAA049_2858 3165707 3166240 - acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2858 VAA049_2859 VAA049_2859 VAA049_2859 3165448 3165750 + hypothetical protein conserved hypothetical protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2859 VAA049_286 VAA049_286 VAA049_286 311750 311959 - hypothetical protein conserved hypothetical protein~[S] COG3089 Uncharacterized protein conserved in bacteria gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_286 VAA049_2860 VAA049_2860 VAA049_2860 3167094 3167393 + hypothetical protein conserved hypothetical protein gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2860 VAA049_2861 VAA049_2861 VAA049_2861 3167390 3167839 + hypothetical protein conserved hypothetical protein~[S] COG1671 Uncharacterized protein conserved in bacteria gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2861 VAA049_2862 VAA049_2862 VAA049_2862 3167905 3169491 - abgT transporter family protein [H] COG2978 Putative p-aminobenzoyl-glutamate transporter gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2862 VAA049_2863 VAA049_2863 rpmJ rpmJ 3169692 3169817 - ribosomal protein L36 rpmJ_bact: ribosomal protein L36~[J] COG0257 Ribosomal protein L36 gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2863 VAA049_2864 VAA049_2864 rpmE rpmE 3169814 3170071 - ribosomal protein L31 L31: ribosomal protein L31~[J] COG0254 Ribosomal protein L31 gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2864 VAA049_2865 VAA049_2865 tsaA tsaA 3170206 3170901 + tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA~[S] COG1720 Uncharacterized conserved protein gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2865 VAA049_2866 VAA049_2866 proS proS 3171127 3172842 + proline--tRNA ligase proS_fam_II: proline--tRNA ligase~[J] COG0442 Prolyl-tRNA synthetase gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2866 VAA049_2867 VAA049_2867 VAA049_2867 3173083 3173727 + hypothetical protein conserved hypothetical protein~[S] COG2979 Uncharacterized protein conserved in bacteria gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2867 VAA049_2868 VAA049_2868 VAA049_2868 3173830 3174033 + hypothetical protein conserved hypothetical protein gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2868 VAA049_2869 VAA049_2869 VAA049_2869 3174039 3174230 + hypothetical protein conserved hypothetical protein gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2869 VAA049_287 VAA049_287 VAA049_287 312088 313077 - alpha/beta hydrolase family protein [R] COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_287 VAA049_2870 VAA049_2870 purL purL 3174331 3178224 - phosphoribosylformylglycinamidine synthase FGAM_synt: phosphoribosylformylglycinamidine synthase~[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase%2C synthetase domain gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2870 VAA049_2871 VAA049_2871 VAA049_2871 3178534 3180126 + bacterial extracellular solute-binding s%2C 3 family protein [M] COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2871 VAA049_2872 VAA049_2872 VAA049_2872 3180305 3180436 + hypothetical protein conserved hypothetical protein gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2872 VAA049_2873 VAA049_2873 VAA049_2873 3180482 3181009 - cytidine and deoxycytidylate deaminase zinc-binding region family protein [FJ] COG0590 Cytosine/adenosine deaminases gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2873 VAA049_2874 VAA049_2874 VAA049_2874 3181132 3182691 - abgT transporter family protein [H] COG2978 Putative p-aminobenzoyl-glutamate transporter gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2874 VAA049_2875 VAA049_2875 VAA049_2875 3183089 3183502 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG4967 Tfp pilus assembly protein PilV gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2875 VAA049_2876 VAA049_2876 VAA049_2876 3183492 3184808 - hypothetical protein conserved hypothetical protein gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2876 VAA049_2877 VAA049_2877 VAA049_2877 3184805 3185395 - putative type 4 fimbrial biogenesis protein PilW gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2877 VAA049_2878 VAA049_2878 VAA049_2878 3185376 3185888 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG4970 Tfp pilus assembly protein FimT gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2878 VAA049_2879 VAA049_2879 VAA049_2879 3185985 3186434 + hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG4968 Tfp pilus assembly protein PilE gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2879 VAA049_288 VAA049_288 VAA049_288 313074 313559 - hypothetical protein conserved hypothetical protein~[S] COG5589 Uncharacterized conserved protein gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_288 VAA049_2880 VAA049_2880 dnaJ dnaJ 3186484 3187629 - chaperone protein DnaJ dnaJ_bact: chaperone protein DnaJ~[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2880 VAA049_2881 VAA049_2881 dnaK dnaK 3187830 3189737 - chaperone protein DnaK prok_dnaK: chaperone protein DnaK~[O] COG0443 Molecular chaperone gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2881 VAA049_2882 VAA049_2882 VAA049_2882 3190001 3190603 - grpE family protein [O] COG0576 Molecular chaperone GrpE (heat shock protein) gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2882 VAA049_2883 VAA049_2883 VAA049_2883 3190749 3191633 + ATP-NAD kinase family protein [G] COG0061 Predicted sugar kinase gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2883 VAA049_2884 VAA049_2884 recN recN 3191763 3193427 + DNA repair protein RecN recN: DNA repair protein RecN~[L] COG0497 ATPase involved in DNA repair gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2884 VAA049_2885 VAA049_2885 VAA049_2885 3193586 3193945 + smpA / OmlA family protein [J] COG2913 Small protein A (tmRNA-binding) gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2885 VAA049_2886 VAA049_2886 VAA049_2886 3194021 3194326 - rnfH Ubiquitin family protein [S] COG2914 Uncharacterized protein conserved in bacteria gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2886 VAA049_2887 VAA049_2887 VAA049_2887 3194329 3194763 - polyketide cyclase / dehydrase and lipid transport family protein [I] COG2867 Oligoketide cyclase/lipid transport protein gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2887 VAA049_2888 VAA049_2888 smpB smpB 3194947 3195432 + SsrA-binding protein smpB: SsrA-binding protein~[O] COG0691 tmRNA-binding protein gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2888 VAA049_2889 VAA049_2889 hsdR hsdR 3195973 3199245 - type I site-specific deoxyribonuclease%2C HsdR family protein hsdR: type I site-specific deoxyribonuclease%2C HsdR family protein~[V] COG0610 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2889 VAA049_289 VAA049_289 VAA049_289 313560 315476 - miro-like family protein [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_289 VAA049_2890 VAA049_2890 VAA049_2890 3199316 3200635 - type I restriction modification DNA specificity domain protein [V] COG0732 Restriction endonuclease S subunits gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2890 VAA049_2891 VAA049_2891 VAA049_2891 3200625 3202223 - N-6 DNA Methylase family protein [V] COG0286 Type I restriction-modification system methyltransferase subunit gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2891 VAA049_2892 VAA049_2892 VAA049_2892 3202371 3205682 - viral (Super1) RNA helicase family protein [L] COG1112 Superfamily I DNA and RNA helicases and helicase subunits gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2892 VAA049_2893 VAA049_2893 VAA049_2893 3206031 3206714 + intracellular septation A family protein gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2893 VAA049_2894 VAA049_2894 VAA049_2894 3206782 3208398 - FAD dependent oxidoreductase family protein [R] COG2509 Uncharacterized FAD-dependent dehydrogenases gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2894 VAA049_2895 VAA049_2895 VAA049_2895 3208637 3208960 + 4Fe-4S binding domain protein [C] COG1146 Ferredoxin gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2895 VAA049_2896 VAA049_2896 VAA049_2896 3209107 3209841 - spoU rRNA Methylase family protein [J] COG0566 rRNA methylases gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2896 VAA049_2897 VAA049_2897 VAA049_2897 3209955 3210353 - hypothetical protein conserved hypothetical protein~[S] COG3602 Uncharacterized protein conserved in bacteria gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2897 VAA049_2898 VAA049_2898 citG citG 3210700 3211641 - triphosphoribosyl-dephospho-CoA synthase CitG citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG~[H] COG1767 Triphosphoribosyl-dephospho-CoA synthetase gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2898 VAA049_2899 VAA049_2899 citX citX 3211619 3212155 - holo-ACP synthase CitX citrate_citX: holo-ACP synthase CitX~[HI] COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2899 VAA049_29 VAA049_29 VAA049_29 31180 31737 - hypothetical protein conserved hypothetical protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_29 VAA049_290 VAA049_290 VAA049_290 315608 316189 + NADPH-dependent FMN reductase family protein [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_290 VAA049_2900 VAA049_2900 citF citF 3212152 3213624 - citrate lyase%2C alpha subunit citF: citrate lyase%2C alpha subunit~[C] COG3051 Citrate lyase%2C alpha subunit gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2900 VAA049_2901 VAA049_2901 citE citE 3213692 3214567 - citrate (pro-3S)-lyase%2C beta subunit citE: citrate (pro-3S)-lyase%2C beta subunit~[G] COG2301 Citrate lyase beta subunit gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2901 VAA049_2902 VAA049_2902 citD citD 3214564 3214860 - citrate lyase acyl carrier protein citD: citrate lyase acyl carrier protein~[C] COG3052 Citrate lyase%2C gamma subunit gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2902 VAA049_2903 VAA049_2903 citC citC 3214912 3215967 - [citrate (pro-3S)-lyase] ligase cit_ly_ligase: [citrate (pro-3S)-lyase] ligase~[C] COG3053 Citrate lyase synthetase gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2903 VAA049_2904 VAA049_2904 citS citS 3216244 3217590 + citrate-sodium symporter [C] COG3493 Na+/citrate symporter gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2904 VAA049_2905 VAA049_2905 VAA049_2905 3217685 3217957 + sodium pump decarboxylase%2C gamma subunit oadG_fam: sodium pump decarboxylase%2C gamma subunit~[C] COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase%2C gamma subunit gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2905 VAA049_2906 VAA049_2906 oadA oadA 3217976 3219775 + oxaloacetate decarboxylase alpha subunit oadA: oxaloacetate decarboxylase alpha subunit~[C] COG5016 Pyruvate/oxaloacetate carboxyltransferase gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2906 VAA049_2907 VAA049_2907 VAA049_2907 3219791 3221092 + sodium ion-translocating decarboxylase%2C beta subunit na_pump_decarbB: sodium ion-translocating decarboxylase%2C beta subunit~[C] COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase%2C beta subunit gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2907 VAA049_2908 VAA049_2908 VAA049_2908 3221163 3222860 + histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2908 VAA049_2909 VAA049_2909 dpiA dpiA 3222874 3223557 + transcriptional regulatory protein DpiA [KT] COG4565 Response regulator of citrate/malate metabolism gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2909 VAA049_291 VAA049_291 VAA049_291 317810 318250 - hypothetical protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_291 VAA049_2910 VAA049_2910 VAA049_2910 3223591 3223863 - hypothetical protein conserved hypothetical protein gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2910 VAA049_2911 VAA049_2911 VAA049_2911 3224029 3224358 - dopa 4%2C5-dioxygenase family protein [Q] COG3805 Aromatic ring-cleaving dioxygenase gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2911 VAA049_2912 VAA049_2912 VAA049_2912 3224507 3225415 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2912 VAA049_2913 VAA049_2913 VAA049_2913 3225519 3226781 + ketopantoate reductase PanE/ApbA family protein [E] COG0665 Glycine/D-amino acid oxidases (deaminating) gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2913 VAA049_2914 VAA049_2914 agcS agcS 3227148 3228698 + amino acid carrier family protein agcS: amino acid carrier family protein~[E] COG1115 Na+/alanine symporter gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2914 VAA049_2915 VAA049_2915 sdsA1 sdsA1 3228778 3230760 - SDS hydrolase SdsA1 [Q] COG2015 Alkyl sulfatase and related hydrolases gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2915 VAA049_2916 VAA049_2916 VAA049_2916 3230979 3231899 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2916 VAA049_2917 VAA049_2917 VAA049_2917 3231915 3232628 - 4'-phosphopantetheinyl transferase superfamily protein [Q] COG2977 Phosphopantetheinyl transferase component of siderophore synthetase gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2917 VAA049_2918 VAA049_2918 VAA049_2918 3232631 3233470 - ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2918 VAA049_2919 VAA049_2919 VAA049_2919 3233586 3234662 - fecCD transport family protein [P] COG4779 ABC-type enterobactin transport system%2C permease component gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2919 VAA049_292 VAA049_292 VAA049_292 316170 317972 + transporter%2C monovalent cation:proton antiporter-2 family protein 2a37: transporter%2C monovalent cation:proton antiporter-2 family protein~[P] COG0475 Kef-type K+ transport systems%2C membrane components gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_292 VAA049_2920 VAA049_2920 VAA049_2920 3234641 3235693 - fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2920 VAA049_2921 VAA049_2921 VAA049_2921 3235690 3236649 - periplasmic binding family protein [P] COG4592 ABC-type Fe2+-enterobactin transport system%2C periplasmic component gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2921 VAA049_2922 VAA049_2922 VAA049_2922 3236851 3238161 + vibriobactin synthesis protein%2C putative [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2922 VAA049_2923 VAA049_2923 VAA049_2923 3238173 3238892 - 2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase dhbA_paeA: 2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2923 VAA049_2924 VAA049_2924 dhbC dhbC 3239135 3240316 + isochorismate synthase dhbC [HQ] COG1169 Isochorismate synthase gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2924 VAA049_2925 VAA049_2925 VAA049_2925 3240327 3241958 + (2%2C3-dihydroxybenzoyl)adenylate synthase DHB_AMP_lig: (2%2C3-dihydroxybenzoyl)adenylate synthase~[Q] COG1021 Peptide arylation enzymes gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2925 VAA049_2926 VAA049_2926 dhbB dhbB 3242060 3242941 - isochorismatase [Q] COG1535 Isochorismate hydrolase gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2926 VAA049_2927 VAA049_2927 VAA049_2927 3243253 3243846 - GPR1/FUN34/yaaH family protein [S] COG1584 Predicted membrane protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2927 VAA049_2928 VAA049_2928 VAA049_2928 3244036 3245757 - carbohydrate binding domain protein [R] COG3979 Uncharacterized protein contain chitin-binding domain type 3 gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2928 VAA049_2929 VAA049_2929 guaA guaA 3246014 3247567 - GMP synthase guaA_Nterm: GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain~[F] COG0519 GMP synthase%2C PP-ATPase domain/subunit gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2929 VAA049_293 VAA049_293 slyD slyD 318274 318879 + FKBP-type peptidyl-prolyl cis-trans isomerase slyD [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_293 VAA049_2930 VAA049_2930 guaB guaB 3247674 3249137 - inosine-5'-monophosphate dehydrogenase IMP_dehydrog: inosine-5'-monophosphate dehydrogenase~[F] COG0516 IMP dehydrogenase/GMP reductase gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2930 VAA049_2931 VAA049_2931 VAA049_2931 3250666 3250899 - NAD-dependent DNA ligase C4 zinc finger domain protein gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2931 VAA049_2932 VAA049_2932 xseA xseA 3249345 3250685 + exodeoxyribonuclease VII%2C large subunit xseA: exodeoxyribonuclease VII%2C large subunit~[L] COG1570 Exonuclease VII%2C large subunit gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2932 VAA049_2933 VAA049_2933 VAA049_2933 3251213 3252088 - putative alanyl-tRNA synthetase [R] COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2933 VAA049_2934 VAA049_2934 engA engA 3252142 3253626 - ribosome-associated GTPase EngA GTPase_EngA: ribosome-associated GTPase EngA~[R] COG1160 Predicted GTPases gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2934 VAA049_2935 VAA049_2935 yfgL yfgL 3253819 3254979 - outer membrane assembly lipoprotein YfgL assembly_YfgL: outer membrane assembly lipoprotein YfgL~[S] COG1520 FOG: WD40-like repeat gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2935 VAA049_2936 VAA049_2936 VAA049_2936 3254992 3255606 - tetratricopeptide repeat family protein [S] COG2976 Uncharacterized protein conserved in bacteria gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2936 VAA049_2937 VAA049_2937 hisS hisS 3255643 3256881 - histidine--tRNA ligase hisS: histidine--tRNA ligase~[J] COG0124 Histidyl-tRNA synthetase gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2937 VAA049_2938 VAA049_2938 ispG ispG 3256937 3258061 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~[I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2938 VAA049_2939 VAA049_2939 VAA049_2939 3258072 3259154 - helix-turn-helix family protein [S] COG1426 Uncharacterized protein conserved in bacteria gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2939 VAA049_294 VAA049_294 VAA049_294 319042 320022 + asparaginase family protein [E] COG1446 Asparaginase gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_294 VAA049_2940 VAA049_2940 rlmN rlmN 3259468 3260589 - 23S rRNA (adenine(2503)-C(2))-methyltransferase rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase~[R] COG0820 Predicted Fe-S-cluster redox enzyme gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2940 VAA049_2941 VAA049_2941 VAA049_2941 3260763 3261191 - nucleoside diphosphate kinase family protein [F] COG0105 Nucleoside diphosphate kinase gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2941 VAA049_2942 VAA049_2942 VAA049_2942 3261395 3262684 - peptidase family protein [E] COG0260 Leucyl aminopeptidase gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2942 VAA049_2943 VAA049_2943 iscX iscX 3262904 3263098 - FeS assembly protein IscX iscX_yfhJ: FeS assembly protein IscX~[S] COG2975 Uncharacterized protein conserved in bacteria gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2943 VAA049_2944 VAA049_2944 fdx fdx 3263147 3263485 - ferredoxin%2C 2Fe-2S type%2C ISC system fdx_isc: ferredoxin%2C 2Fe-2S type%2C ISC system~[C] COG0633 Ferredoxin gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2944 VAA049_2945 VAA049_2945 hscA hscA 3263499 3265349 - Fe-S protein assembly chaperone HscA hscA: Fe-S protein assembly chaperone HscA~[O] COG0443 Molecular chaperone gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2945 VAA049_2946 VAA049_2946 hscB hscB 3265373 3265888 - Fe-S protein assembly co-chaperone HscB hscB: Fe-S protein assembly co-chaperone HscB~[O] COG1076 DnaJ-domain-containing proteins 1 gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2946 VAA049_2947 VAA049_2947 iscA iscA 3265937 3266260 - iron-sulfur cluster assembly protein IscA iscA: iron-sulfur cluster assembly protein IscA~[S] COG0316 Uncharacterized conserved protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2947 VAA049_2948 VAA049_2948 iscU iscU 3266321 3266704 - FeS cluster assembly scaffold IscU iscU: FeS cluster assembly scaffold IscU~[C] COG0822 NifU homolog involved in Fe-S cluster formation gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2948 VAA049_2949 VAA049_2949 iscS iscS 3266741 3267955 - cysteine desulfurase IscS iscS: cysteine desulfurase IscS~[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2949 VAA049_295 VAA049_295 purA purA 320150 321448 + adenylosuccinate synthase purA: adenylosuccinate synthase~[F] COG0104 Adenylosuccinate synthase gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_295 VAA049_2950 VAA049_2950 iscR iscR 3267982 3268503 - iron-sulfur cluster assembly transcription factor IscR iscR: iron-sulfur cluster assembly transcription factor IscR~[K] COG1959 Predicted transcriptional regulator gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2950 VAA049_2951 VAA049_2951 VAA049_2951 3268618 3269349 - RNA methyltransferase%2C TrmH%2C group 1 family protein rRNA_methyl_1: RNA methyltransferase%2C TrmH%2C group 1 family protein~[J] COG0565 rRNA methylase gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2951 VAA049_2952 VAA049_2952 VAA049_2952 3269531 3270334 + inositol monophosphatase family protein [G] COG0483 Archaeal fructose-1%2C6-bisphosphatase and related enzymes of inositol monophosphatase family gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2952 VAA049_2953 VAA049_2953 secF secF 3270505 3271452 - export membrane protein SecF 3a0501s07: -export membrane protein SecF~[U] COG0341 Preprotein translocase subunit SecF gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2953 VAA049_2954 VAA049_2954 secD secD 3271467 3273320 - export membrane protein SecD secD: -export membrane protein SecD~[U] COG0342 Preprotein translocase subunit SecD gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2954 VAA049_2955 VAA049_2955 yajC yajC 3273342 3273674 - preprotein translocase%2C YajC subunit yajC: preprotein translocase%2C YajC subunit~[U] COG1862 Preprotein translocase subunit YajC gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2955 VAA049_2956 VAA049_2956 tgt tgt 3273779 3274918 - tRNA-guanine transglycosylase Q_tRNA_tgt: tRNA-guanine transglycosylase~[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2956 VAA049_2957 VAA049_2957 queA queA 3275147 3276205 - tRNA ribosyltransferase-isomerase S-adenosylmethionine:tRNA ribosyltransferase-isomerase~queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase~[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2957 VAA049_2958 VAA049_2958 VAA049_2958 3276509 3276958 + acetoin utilization protein AcuB%2C putative [R] COG0517 FOG: CBS domain gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2958 VAA049_2959 VAA049_2959 aceA aceA 3277111 3278424 - isocitrate lyase isocit_lyase: isocitrate lyase~[C] COG2224 Isocitrate lyase gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2959 VAA049_296 VAA049_296 VAA049_296 321656 322291 + sel1 repeat family protein [R] COG0790 FOG: TPR repeat%2C SEL1 subfamily gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_296 VAA049_2960 VAA049_2960 aceB aceB 3278554 3280191 - malate synthase A malate_syn_A: malate synthase A~[C] COG2225 Malate synthase gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2960 VAA049_2961 VAA049_2961 VAA049_2961 3280775 3281680 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2961 VAA049_2962 VAA049_2962 VAA049_2962 3281902 3282507 + hypothetical protein C-terminal domain of 1-Cys peroxiredoxin family protein~[O] COG0450 Peroxiredoxin gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2962 VAA049_2963 VAA049_2963 VAA049_2963 3282842 3283606 + cutC family protein [P] COG3142 Uncharacterized protein involved in copper resistance gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2963 VAA049_2964 VAA049_2964 ppk2 ppk2 3283809 3284585 + polyphosphate kinase 2 PPK2_P_aer: polyphosphate kinase 2~[S] COG2326 Uncharacterized conserved protein gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2964 VAA049_2965 VAA049_2965 phoU phoU 3284646 3285356 - phosphate transport system regulatory protein PhoU phoU_full: phosphate transport system regulatory protein PhoU~[P] COG0704 Phosphate uptake regulator gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2965 VAA049_2966 VAA049_2966 pstB pstB 3285390 3286211 - phosphate ABC transporter%2C ATP-binding protein 3a0107s01c2: phosphate ABC transporter%2C ATP-binding protein~[P] COG1117 ABC-type phosphate transport system%2C ATPase component gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2966 VAA049_2967 VAA049_2967 pstA pstA 3286214 3287860 - phosphate ABC transporter%2C permease protein PstA 3a0107s02c: phosphate ABC transporter%2C permease protein PstA~[P] COG4985 ABC-type phosphate transport system%2C auxiliary component gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2967 VAA049_2968 VAA049_2968 VAA049_2968 3287870 3290065 - binding--dependent transport system inner membrane component family protein [R] COG4590 ABC-type uncharacterized transport system%2C permease component gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2968 VAA049_2969 VAA049_2969 ppk1 ppk1 3290264 3292369 + polyphosphate kinase 1 poly_P_kin: polyphosphate kinase 1~[P] COG0855 Polyphosphate kinase gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2969 VAA049_297 VAA049_297 VAA049_297 322318 324147 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [R] COG3083 Predicted hydrolase of alkaline phosphatase superfamily gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_297 VAA049_2970 VAA049_2970 VAA049_2970 3292350 3293852 + ppx/GppA phosphatase family protein [FP] COG0248 Exopolyphosphatase gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2970 VAA049_2971 VAA049_2971 pstS pstS 3293920 3294867 - phosphate binding family protein ptsS_2: phosphate binding family protein~[P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2971 VAA049_2972 VAA049_2972 phoR phoR 3294894 3296195 - phosphate regulon sensor kinase PhoR phoR_proteo: phosphate regulon sensor kinase PhoR~[T] COG0642 Signal transduction histidine kinase gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2972 VAA049_2973 VAA049_2973 phoB phoB 3296217 3296906 - phosphate regulon transcriptional regulatory protein PhoB phoB: phosphate regulon transcriptional regulatory protein PhoB~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2973 VAA049_2974 VAA049_2974 VAA049_2974 3297142 3298056 + exonuclease%2C RdgC family protein [L] COG2974 DNA recombination-dependent growth factor C gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2974 VAA049_2975 VAA049_2975 VAA049_2975 3298207 3299607 + peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2975 VAA049_2976 VAA049_2976 VAA049_2976 3299610 3299864 + 4Fe-4S dicluster domain protein [C] COG1145 Ferredoxin gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2976 VAA049_2977 VAA049_2977 VAA049_2977 3299899 3300621 - nitroreductase family protein [C] COG0778 Nitroreductase gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2977 VAA049_2978 VAA049_2978 VAA049_2978 3300631 3300954 - hypothetical protein conserved hypothetical protein gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2978 VAA049_2979 VAA049_2979 VAA049_2979 3301141 3301217 - tRNA-Asp tRNA gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2979 VAA049_298 VAA049_298 rnr rnr 324330 326795 + ribonuclease R RNase_R: ribonuclease R~[K] COG0557 Exoribonuclease R gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_298 VAA049_2980 VAA049_2980 VAA049_2980 3301243 3301355 - 5S ribosomal RNA rRNA gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2980 VAA049_2981 VAA049_2981 VAA049_2981 3301489 3304371 - 23S ribosomal RNA rRNA gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2981 VAA049_2982 VAA049_2982 VAA049_2982 3304662 3304737 - tRNA-Glu tRNA gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2982 VAA049_2983 VAA049_2983 VAA049_2983 3304812 3306340 - 16S ribosomal RNA rRNA gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2983 VAA049_2984 VAA049_2984 clpB clpB 3306868 3309441 - ATP-dependent chaperone protein ClpB chaperone_ClpB: ATP-dependent chaperone protein ClpB~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2984 VAA049_2985 VAA049_2985 VAA049_2985 3309566 3310288 - multi-copper polyphenol oxidoreductase laccase family protein [S] COG1496 Uncharacterized conserved protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2985 VAA049_2986 VAA049_2986 VAA049_2986 3310291 3311265 - pseudouridine synthase%2C RluA family protein rluA_subfam: pseudouridine synthase%2C RluA family protein~[J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2986 VAA049_2987 VAA049_2987 yfiO yfiO 3311420 3312145 + outer membrane assembly lipoYfiO family protein OM_YfiO: outer membrane assembly lipoYfiO family protein~[R] COG4105 DNA uptake lipoprotein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2987 VAA049_2988 VAA049_2988 raiA raiA 3312547 3312873 + ribosomal subunit interface protein yfiA: ribosomal subunit interface protein~[J] COG1544 Ribosome-associated protein Y (PSrp-1) gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2988 VAA049_2989 VAA049_2989 VAA049_2989 3313112 3314287 + chorismate mutase CM_P_1: chorismate mutase~[E] COG0077 Prephenate dehydratase gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2989 VAA049_299 VAA049_299 VAA049_299 326803 327546 + RNA 2'-O ribose methyltransferase substrate binding family protein [J] COG0566 rRNA methylases gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_299 VAA049_2990 VAA049_2990 VAA049_2990 3314469 3315503 + bacterial extracellular solute-binding family protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2990 VAA049_2991 VAA049_2991 VAA049_2991 3315487 3317862 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2991 VAA049_2992 VAA049_2992 VAA049_2992 3317810 3318334 + hypothetical protein conserved hypothetical protein~[S] COG1986 Uncharacterized conserved protein gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2992 VAA049_2993 VAA049_2993 trpR trpR 3318412 3318723 - trp operon repressor trpR: trp operon repressor~[K] COG2973 Trp operon repressor gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2993 VAA049_2994 VAA049_2994 VAA049_2994 3318778 3320724 - soluble lytic murein transglycosylase L domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2994 VAA049_2995 VAA049_2995 ccmA ccmA 3321085 3322752 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2995 VAA049_2996 VAA049_2996 VAA049_2996 3322923 3323294 + pilZ domain protein gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2996 VAA049_2997 VAA049_2997 tyrA tyrA 3323361 3324488 - chorismate mutase CM_T: chorismate mutase~[E] COG0287 Prephenate dehydrogenase gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2997 VAA049_2998 VAA049_2998 VAA049_2998 3324501 3325574 - 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2998 VAA049_2999 VAA049_2999 VAA049_2999 3325816 3327492 + histidine kinase family protein [T] COG3275 Putative regulator of cell autolysis gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_2999 VAA049_3 VAA049_3 recF recF 2617 3708 + DNA replication and repair RecF family protein recf: DNA replication and repair RecF family protein~[L] COG1195 Recombinational DNA repair ATPase (RecF pathway) gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3 VAA049_30 VAA049_30 VAA049_30 31749 33194 - potassium uptake%2C TrkH family protein 2a38: potassium uptake%2C TrkH family protein~[P] COG0168 Trk-type K+ transport systems%2C membrane components gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_30 VAA049_300 VAA049_300 rpsJ rpsJ 328016 328327 + ribosomal protein S10 rpsJ_bact: ribosomal protein S10~[J] COG0051 Ribosomal protein S10 gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_300 VAA049_3000 VAA049_3000 VAA049_3000 3327502 3328215 + response regulator [KT] COG3279 Response regulator of the LytR/AlgR family gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3000 VAA049_3001 VAA049_3001 nagZ nagZ 3328242 3329234 - beta-hexosaminidase [G] COG1472 Beta-glucosidase-related glycosidases gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3001 VAA049_3002 VAA049_3002 VAA049_3002 3329340 3330452 + hypothetical protein conserved hypothetical protein~[O] COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3002 VAA049_3003 VAA049_3003 murQ murQ 3330470 3331393 + N-acetylmuramic acid 6-phosphate etherase [R] COG2103 Predicted sugar phosphate isomerase gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3003 VAA049_3004 VAA049_3004 VAA049_3004 3331417 3333213 - trkA-N domain protein [P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3004 VAA049_3005 VAA049_3005 VAA049_3005 3333232 3333555 - hypothetical protein conserved hypothetical protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3005 VAA049_3006 VAA049_3006 VAA049_3006 3333811 3335295 + carbon starvation CstA family protein [T] COG1966 Carbon starvation protein%2C predicted membrane protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3006 VAA049_3007 VAA049_3007 ispH ispH 3335432 3336382 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~[IM] COG0761 Penicillin tolerance protein gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3007 VAA049_3008 VAA049_3008 VAA049_3008 3336429 3336863 - FKBP-type peptidyl-prolyl cis-trans isomerase family protein [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3008 VAA049_3009 VAA049_3009 lspA lspA 3337026 3337541 - signal peptidase II lspA: signal peptidase II~[MU] COG0597 Lipoprotein signal peptidase gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3009 VAA049_301 VAA049_301 rplC rplC 328342 328971 + 50S ribosomal protein L3 L3_bact: 50S ribosomal protein L3~[J] COG0087 Ribosomal protein L3 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_301 VAA049_3010 VAA049_3010 ileS ileS 3337557 3340406 - isoleucine--tRNA ligase ileS: isoleucine--tRNA ligase~[J] COG0060 Isoleucyl-tRNA synthetase gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3010 VAA049_3011 VAA049_3011 ribF ribF 3340437 3341405 - riboflavin biosynthesis protein RibF ribF: riboflavin biosynthesis protein RibF~[H] COG0196 FAD synthase gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3011 VAA049_3012 VAA049_3012 mviN mviN 3341474 3343036 - murein biosynthesis integral membrane protein MurJ murJ_mviN: murein biosynthesis integral membrane protein MurJ~[R] COG0728 Uncharacterized membrane protein%2C putative virulence factor gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3012 VAA049_3013 VAA049_3013 rpsT rpsT 3343294 3343554 + ribosomal protein S20 S20: ribosomal protein S20~[J] COG0268 Ribosomal protein S20 gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3013 VAA049_3014 VAA049_3014 VAA049_3014 3343622 3343924 - transcriptional activator HlyU [K] COG0640 Predicted transcriptional regulators gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3014 VAA049_3015 VAA049_3015 VAA049_3015 3344147 3345037 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3015 VAA049_3016 VAA049_3016 VAA049_3016 3345432 3346580 + na+/Pi-cotransporter family protein [P] COG1283 Na+/phosphate symporter gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3016 VAA049_3017 VAA049_3017 thyA thyA 3346673 3347524 - thymidylate synthase thym_sym: thymidylate synthase~[F] COG0207 Thymidylate synthase gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3017 VAA049_3018 VAA049_3018 lgt lgt 3347534 3348349 - prolipoprotein diacylglyceryl transferase lgt: prolipoprotein diacylglyceryl transferase~[M] COG0682 Prolipoprotein diacylglyceryltransferase gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3018 VAA049_3019 VAA049_3019 VAA049_3019 3348378 3349172 - sulfite exporter TauE/SafE family protein [R] COG0730 Predicted permeases gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3019 VAA049_302 VAA049_302 rplD rplD 328988 329590 + 50S ribosomal protein L4 rplD_bact: 50S ribosomal protein L4~[J] COG0088 Ribosomal protein L4 gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_302 VAA049_3020 VAA049_3020 ptsP ptsP 3349182 3351428 - phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[T] COG3605 Signal transduction protein containing GAF and PtsI domains gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3020 VAA049_3021 VAA049_3021 VAA049_3021 3351431 3351949 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3021 VAA049_3022 VAA049_3022 mutH mutH 3352580 3353245 + DNA mismatch repair endonuclease MutH mutH_TIGR: DNA mismatch repair endonuclease MutH~[L] COG3066 DNA mismatch repair protein gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3022 VAA049_3023 VAA049_3023 VAA049_3023 3353461 3354495 + aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3023 VAA049_3024 VAA049_3024 VAA049_3024 3354533 3354784 - hypothetical protein conserved hypothetical protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3024 VAA049_3025 VAA049_3025 VAA049_3025 3355362 3356696 - bacterial regulatory%2C Fis family protein [KT] COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3025 VAA049_3026 VAA049_3026 lysS lysS 3356970 3358502 - lysine--tRNA ligase lysS_bact: lysine--tRNA ligase~[J] COG1190 Lysyl-tRNA synthetase (class II) gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3026 VAA049_3027 VAA049_3027 prfB prfB 3358533 3359432 - peptide chain release factor 2 prfB: peptide chain release factor 2~[J] COG1186 Protein chain release factor B gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3027 VAA049_3028 VAA049_3028 brnQ brnQ 3359801 3361114 - branched-chain amino acid transport system II carrier protein livcs: branched-chain amino acid transport system II carrier protein~[E] COG1114 Branched-chain amino acid permeases gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3028 VAA049_3029 VAA049_3029 VAA049_3029 3361495 3362145 + methyltransferase small domain protein [R] COG4123 Predicted O-methyltransferase gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3029 VAA049_303 VAA049_303 rplW rplW 329587 329889 + 50S ribosomal protein L23 [J] COG0089 Ribosomal protein L23 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_303 VAA049_3030 VAA049_3030 VAA049_3030 3362233 3363504 + hypothetical protein SNF2 family N-terminal domain protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3030 VAA049_3031 VAA049_3031 prfC prfC 3363626 3365215 - peptide chain release factor 3 prfC: peptide chain release factor 3~[J] COG4108 Peptide chain release factor RF-3 gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3031 VAA049_3032 VAA049_3032 rimI rimI 3367470 3367919 - ribosomal-protein-alanine acetyltransferase rimI: ribosomal-protein-alanine acetyltransferase~[R] COG0456 Acetyltransferases gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3032 VAA049_3033 VAA049_3033 VAA049_3033 3365424 3367481 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3033 VAA049_3034 VAA049_3034 VAA049_3034 3367916 3368323 - DNA polymerase III psi subunit [L] COG3050 DNA polymerase III%2C psi subunit gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3034 VAA049_3035 VAA049_3035 VAA049_3035 3368434 3368937 - acetyltransferase domain protein [R] COG3153 Predicted acetyltransferase gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3035 VAA049_3036 VAA049_3036 VAA049_3036 3368921 3369448 - SCP-2 sterol transfer family protein [I] COG3154 Putative lipid carrier protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3036 VAA049_3037 VAA049_3037 VAA049_3037 3369681 3371735 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3037 VAA049_3038 VAA049_3038 VAA049_3038 3371843 3372856 + peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3038 VAA049_3039 VAA049_3039 VAA049_3039 3372868 3373746 + peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3039 VAA049_304 VAA049_304 rplB rplB 329906 330730 + ribosomal protein L2 rplB_bact: ribosomal protein L2~[J] COG0090 Ribosomal protein L2 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_304 VAA049_3040 VAA049_3040 VAA049_3040 3373793 3375127 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3040 VAA049_3041 VAA049_3041 VAA049_3041 3375173 3375580 - hypothetical protein iron dependent repressor%2C N-terminal DNA binding domain protein~[K] COG1846 Transcriptional regulators gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3041 VAA049_3042 VAA049_3042 VAA049_3042 3375753 3377138 + transposase Tn5 dimerization domain protein gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3042 VAA049_3043 VAA049_3043 VAA049_3043 3377185 3378096 - tetratricopeptide repeat family protein [R] COG4785 Lipoprotein NlpI%2C contains TPR repeats gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3043 VAA049_3044 VAA049_3044 pnp pnp 3378212 3380338 - polyribonucleotide nucleotidyltransferase polynuc_phos: polyribonucleotide nucleotidyltransferase~[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3044 VAA049_3045 VAA049_3045 rpsO rpsO 3380701 3380970 - ribosomal protein S15 S15_bact: ribosomal protein S15~[J] COG0184 Ribosomal protein S15P/S13E gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3045 VAA049_3046 VAA049_3046 truB truB 3381112 3382050 - tRNA pseudouridine(55) synthase truB: tRNA pseudouridine(55) synthase~[J] COG0130 Pseudouridine synthase gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3046 VAA049_3047 VAA049_3047 rbfA rbfA 3382050 3382448 - ribosome-binding factor A rbfA: ribosome-binding factor A~[J] COG0858 Ribosome-binding factor A gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3047 VAA049_3048 VAA049_3048 infB infB 3382550 3385246 - translation initiation factor IF-2 IF-2: translation initiation factor IF-2~[J] COG0532 Translation initiation factor 2 (IF-2%3B GTPase) gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3048 VAA049_3049 VAA049_3049 nusA nusA 3385271 3386758 - Transcription elongation factor nusA_Cterm_rpt: transcription termination factor NusA%2C C-terminal duplication~[K] COG0195 Transcription elongation factor gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3049 VAA049_305 VAA049_305 rpsS rpsS 330751 331029 + ribosomal protein S19 rpsS_bact: ribosomal protein S19~[J] COG0185 Ribosomal protein S19 gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_305 VAA049_3050 VAA049_3050 VAA049_3050 3386777 3387232 - hypothetical protein conserved hypothetical protein~[S] COG0779 Uncharacterized protein conserved in bacteria gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3050 VAA049_3051 VAA049_3051 VAA049_3051 3387442 3387518 - tRNA-Met tRNA gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3051 VAA049_3052 VAA049_3052 VAA049_3052 3387572 3387655 - tRNA-Leu tRNA gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3052 VAA049_3053 VAA049_3053 secG secG 3387663 3387998 - preprotein translocase%2C SecG subunit secG: preprotein translocase%2C SecG subunit~[U] COG1314 Preprotein translocase subunit SecG gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3053 VAA049_3054 VAA049_3054 VAA049_3054 3388014 3388196 - hypothetical protein gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3054 VAA049_3055 VAA049_3055 glmM glmM 3388255 3389595 - phosphoglucosamine mutase glmM: phosphoglucosamine mutase~[G] COG1109 Phosphomannomutase gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3055 VAA049_3056 VAA049_3056 folP folP 3389621 3390457 - dihydropteroate synthase DHPS: dihydropteroate synthase~[H] COG0294 Dihydropteroate synthase and related enzymes gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3056 VAA049_3057 VAA049_3057 hflB hflB 3390524 3392470 - ATP-dependent metallopeptidase HflB family protein ftsH_fam: ATP-dependent metallopeptidase HflB family protein~[O] COG0465 ATP-dependent Zn proteases gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3057 VAA049_3058 VAA049_3058 VAA049_3058 3392580 3393209 - ftsJ-like methyltransferase family protein [J] COG0293 23S rRNA methylase gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3058 VAA049_3059 VAA049_3059 yhbY yhbY 3393329 3393625 + RNA-binding protein YhbY [J] COG1534 Predicted RNA-binding protein containing KH domain%2C possibly ribosomal protein gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3059 VAA049_306 VAA049_306 rplV rplV 331040 331372 + ribosomal protein L22 rplV_bact: ribosomal protein L22~[J] COG0091 Ribosomal protein L22 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_306 VAA049_3060 VAA049_3060 greA greA 3393702 3394175 - transcription elongation factor greA [K] COG0782 Transcription elongation factor gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3060 VAA049_3061 VAA049_3061 VAA049_3061 3394730 3395782 + gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3061 VAA049_3062 VAA049_3062 dacB dacB 3395880 3397325 + D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3062 VAA049_3063 VAA049_3063 tyrS tyrS 3397389 3398576 - tyrosine--tRNA ligase tyrS: tyrosine--tRNA ligase~[J] COG0162 Tyrosyl-tRNA synthetase gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3063 VAA049_3064 VAA049_3064 VAA049_3064 3398707 3400008 + peptidase M23 family protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3064 VAA049_3065 VAA049_3065 VAA049_3065 3400090 3403209 - acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3065 VAA049_3066 VAA049_3066 VAA049_3066 3403220 3404320 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3066 VAA049_3067 VAA049_3067 VAA049_3067 3404418 3404759 - iron-sulfur cluster assembly accessory family protein [S] COG0316 Uncharacterized conserved protein gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3067 VAA049_3068 VAA049_3068 hemL hemL 3405043 3406341 + glutamate-1-semialdehyde-2%2C1-aminomutase hemL: glutamate-1-semialdehyde-2%2C1-aminomutase~[H] COG0001 Glutamate-1-semialdehyde aminotransferase gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3068 VAA049_3069 VAA049_3069 VAA049_3069 3406403 3406558 - hypothetical protein conserved hypothetical protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3069 VAA049_307 VAA049_307 rpsC rpsC 331392 332093 + ribosomal protein S3 rpsC_bact: ribosomal protein S3~[J] COG0092 Ribosomal protein S3 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_307 VAA049_3070 VAA049_3070 VAA049_3070 3406595 3407680 + hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3070 VAA049_3071 VAA049_3071 VAA049_3071 3407753 3408775 + ribosomal L11 methyltransferase family protein [J] COG2813 16S RNA G1207 methylase RsmC gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3071 VAA049_3072 VAA049_3072 VAA049_3072 3408983 3412372 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3072 VAA049_3073 VAA049_3073 VAA049_3073 3413283 3414953 + peptide ABC transporter%2C periplasmic peptide-binding protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3073 VAA049_3074 VAA049_3074 VAA049_3074 3415123 3416109 + binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3074 VAA049_3075 VAA049_3075 VAA049_3075 3416112 3417137 + binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3075 VAA049_3076 VAA049_3076 VAA049_3076 3417140 3418123 + hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3076 VAA049_3077 VAA049_3077 VAA049_3077 3418166 3419161 + hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[E] COG4608 ABC-type oligopeptide transport system%2C ATPase component gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3077 VAA049_3078 VAA049_3078 VAA049_3078 3419218 3420942 + glycosyl hydrolase 9 family protein gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3078 VAA049_3079 VAA049_3079 VAA049_3079 3420939 3421823 + badF/BadG/BcrA/BcrD ATPase family protein [G] COG2971 Predicted N-acetylglucosamine kinase gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3079 VAA049_308 VAA049_308 rplP rplP 332105 332515 + ribosomal protein L16 rplP_bact: ribosomal protein L16~[J] COG0197 Ribosomal protein L16/L10E gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_308 VAA049_3080 VAA049_3080 exo I exo I 3421820 3423733 + beta-hexosaminidase [G] COG3525 N-acetyl-beta-hexosaminidase gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3080 VAA049_3081 VAA049_3081 VAA049_3081 3423852 3426257 + hypothetical protein conserved hypothetical protein~[G] COG3459 Cellobiose phosphorylase gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3081 VAA049_3082 VAA049_3082 VAA049_3082 3426380 3427792 + phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3082 VAA049_3083 VAA049_3083 VAA049_3083 3427923 3428954 - ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3083 VAA049_3084 VAA049_3084 VAA049_3084 3428954 3430579 - binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3084 VAA049_3085 VAA049_3085 VAA049_3085 3430663 3431676 - bacterial extracellular solute-binding family protein [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3085 VAA049_3086 VAA049_3086 amt amt 3431818 3433047 - ammonium transporter family protein amt: ammonium transporter family protein~[P] COG0004 Ammonia permease gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3086 VAA049_3087 VAA049_3087 VAA049_3087 3433069 3433407 - nitrogen regulatory P-II family protein [E] COG0347 Nitrogen regulatory protein PII gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3087 VAA049_3088 VAA049_3088 VAA049_3088 3433585 3433965 - hypothetical protein conserved hypothetical protein~[S] COG3112 Uncharacterized protein conserved in bacteria gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3088 VAA049_3089 VAA049_3089 acnB acnB 3434120 3436717 - aconitate hydratase 2 acnB: aconitate hydratase 2~[C] COG1049 Aconitase B gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3089 VAA049_309 VAA049_309 rpmC rpmC 332515 332706 + ribosomal protein L29 L29: ribosomal protein L29~[J] COG0255 Ribosomal protein L29 gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_309 VAA049_3090 VAA049_3090 VAA049_3090 3436870 3436968 - hypothetical protein conserved hypothetical protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3090 VAA049_3091 VAA049_3091 VAA049_3091 3436981 3439272 - surface antigen variable number repeat family protein [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3091 VAA049_3092 VAA049_3092 mrcB mrcB 3439512 3441845 - penicillin-binding protein 1B PBP_1b: penicillin-binding protein 1B~[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein) gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3092 VAA049_3093 VAA049_3093 hrpB hrpB 3441842 3444304 - ATP-dependent helicase HrpB DEAH_box_HrpB: ATP-dependent helicase HrpB~[L] COG1643 HrpA-like helicases gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3093 VAA049_3094 VAA049_3094 VAA049_3094 3444403 3445728 - alpha/beta hydrolase family protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3094 VAA049_3095 VAA049_3095 sfsA sfsA 3446002 3446736 + sugar fermentation stimulation protein sfsA: sugar fermentation stimulation protein~[R] COG1489 DNA-binding protein%2C stimulates sugar fermentation gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3095 VAA049_3096 VAA049_3096 dksA dksA 3446861 3447307 + RNA polymerase-binding protein DksA dksA: RNA polymerase-binding protein DksA~[T] COG1734 DnaK suppressor protein gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3096 VAA049_3097 VAA049_3097 gluQ gluQ 3447381 3448271 + glutamyl-queuosine tRNA(Asp) synthetase queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3097 VAA049_3098 VAA049_3098 pcnB pcnB 3448362 3449735 + poly(A) polymerase family protein pcnB: poly(A) polymerase family protein~[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3098 VAA049_3099 VAA049_3099 folK folK 3449732 3450235 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase~[H] COG0801 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3099 VAA049_31 VAA049_31 VAA049_31 33206 34582 - ketopantoate reductase PanE/ApbA family protein [P] COG0569 K+ transport systems%2C NAD-binding component gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_31 VAA049_310 VAA049_310 rpsQ rpsQ 332706 332960 + 30S ribosomal protein S17 S17_bact: 30S ribosomal protein S17~[J] COG0186 Ribosomal protein S17 gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_310 VAA049_3100 VAA049_3100 panB panB 3450238 3451032 + 3-methyl-2-oxobutanoate hydroxymethyltransferase panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase~[H] COG0413 Ketopantoate hydroxymethyltransferase gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3100 VAA049_3101 VAA049_3101 panC panC 3451043 3451924 + pantoate--beta-alanine ligase panC: pantoate--beta-alanine ligase~[H] COG0414 Panthothenate synthetase gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3101 VAA049_3102 VAA049_3102 VAA049_3102 3451988 3452758 - ABC-2 type transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3102 VAA049_3103 VAA049_3103 VAA049_3103 3452764 3453681 - ABC transporter family protein [V] COG1131 ABC-type multidrug transport system%2C ATPase component gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3103 VAA049_3104 VAA049_3104 VAA049_3104 3454062 3455708 - sulfate transporter family protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3104 VAA049_3105 VAA049_3105 VAA049_3105 3455856 3456524 + carbonic anhydrase family protein [P] COG0288 Carbonic anhydrase gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3105 VAA049_3106 VAA049_3106 hpt hpt 3456599 3457132 - hypoxanthine phosphoribosyltransferase HGPRTase: hypoxanthine phosphoribosyltransferase~[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3106 VAA049_3107 VAA049_3107 smcR smcR 3457428 3458039 + quorum-sensing regulator of virulence HapR [K] COG1309 Transcriptional regulator gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3107 VAA049_3108 VAA049_3108 rsmI rsmI 3458249 3459115 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [R] COG0313 Predicted methyltransferases gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3108 VAA049_3109 VAA049_3109 VAA049_3109 3459185 3460990 + lppC lipofamily protein [R] COG3107 Putative lipoprotein gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3109 VAA049_311 VAA049_311 rplN rplN 333123 333494 + ribosomal protein L14 rplN_bact: ribosomal protein L14~[J] COG0093 Ribosomal protein L14 gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_311 VAA049_3110 VAA049_3110 VAA049_3110 3461022 3461345 + hypothetical protein conserved hypothetical protein~[L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3110 VAA049_3111 VAA049_3111 VAA049_3111 3461349 3461939 + SIS domain protein [G] COG0279 Phosphoheptose isomerase gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3111 VAA049_3112 VAA049_3112 VAA049_3112 3461942 3462511 + BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3112 VAA049_3113 VAA049_3113 VAA049_3113 3462579 3463043 - stringent starvation B family protein [R] COG2969 Stringent starvation protein B gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3113 VAA049_3114 VAA049_3114 VAA049_3114 3463055 3463690 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3114 VAA049_3115 VAA049_3115 VAA049_3115 3463790 3464527 - cytochrome C1 family protein [C] COG2857 Cytochrome c1 gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3115 VAA049_3116 VAA049_3116 VAA049_3116 3464524 3465789 - hypothetical protein cytochrome b(C-terminal)/b6/petD family protein~[C] COG1290 Cytochrome b subunit of the bc complex gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3116 VAA049_3117 VAA049_3117 petA petA 3465789 3466382 - ubiquinol-cytochrome c reductase%2C iron-sulfur subunit rieske_proteo: ubiquinol-cytochrome c reductase%2C iron-sulfur subunit~[C] COG0723 Rieske Fe-S protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3117 VAA049_3118 VAA049_3118 rpsI rpsI 3466710 3467102 - 30S ribosomal protein S9 [J] COG0103 Ribosomal protein S9 gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3118 VAA049_3119 VAA049_3119 rplM rplM 3467118 3467546 - ribosomal protein L13 rplM_bact: ribosomal protein L13~[J] COG0102 Ribosomal protein L13 gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3119 VAA049_312 VAA049_312 rplX rplX 333507 333824 + ribosomal protein L24 rplX_bact: ribosomal protein L24~[J] COG0198 Ribosomal protein L24 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_312 VAA049_3120 VAA049_3120 VAA049_3120 3467770 3468873 - AFG1-like ATPase family protein [R] COG1485 Predicted ATPase gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3120 VAA049_3121 VAA049_3121 VAA049_3121 3469027 3469464 + hypothetical protein conserved hypothetical protein~[S] COG3105 Uncharacterized protein conserved in bacteria gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3121 VAA049_3122 VAA049_3122 VAA049_3122 3469596 3470963 + peptidase Do family protein degP_htrA_DO: peptidase Do family protein~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3122 VAA049_3123 VAA049_3123 degS degS 3471140 3472198 + periplasmic serine peptidase DegS protease_degS: periplasmic serine peptidase DegS~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3123 VAA049_3124 VAA049_3124 rplS rplS 3472319 3472672 - ribosomal protein L19 rplS_bact: ribosomal protein L19~[J] COG0335 Ribosomal protein L19 gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3124 VAA049_3125 VAA049_3125 trmD trmD 3472714 3473457 - tRNA (guanine(37)-N(1))-methyltransferase trmD: tRNA (guanine(37)-N(1))-methyltransferase~[J] COG0336 tRNA-(guanine-N1)-methyltransferase gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3125 VAA049_3126 VAA049_3126 rimM rimM 3473485 3474039 - 16S rRNA processing protein RimM 16S_RimM: 16S rRNA processing protein RimM~[J] COG0806 RimM protein%2C required for 16S rRNA processing gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3126 VAA049_3127 VAA049_3127 rpsP rpsP 3474067 3474315 - ribosomal protein S16 S16: ribosomal protein S16~[J] COG0228 Ribosomal protein S16 gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3127 VAA049_3128 VAA049_3128 ffh ffh 3474551 3475936 - signal recognition particle protein ffh: signal recognition particle protein~[U] COG0541 Signal recognition particle GTPase gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3128 VAA049_3129 VAA049_3129 VAA049_3129 3475951 3476046 - hypothetical protein gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3129 VAA049_313 VAA049_313 VAA049_313 333849 334388 + ribosomal L5 family protein [J] COG0094 Ribosomal protein L5 gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_313 VAA049_3130 VAA049_3130 VAA049_3130 3476149 3476943 + cytochrome C assembly family protein [R] COG4137 ABC-type uncharacterized transport system%2C permease component gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3130 VAA049_3131 VAA049_3131 VAA049_3131 3477026 3478306 + CBS domain protein [P] COG4536 Putative Mg2+ and Co2+ transporter CorB gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3131 VAA049_3132 VAA049_3132 VAA049_3132 3478376 3478894 - S-Ribosylhomocysteinase family protein [T] COG1854 LuxS protein involved in autoinducer AI2 synthesis gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3132 VAA049_3133 VAA049_3133 gshA gshA 3479141 3480712 - glutamate--cysteine ligase glu_cys_ligase: glutamate--cysteine ligase~[H] COG2918 Gamma-glutamylcysteine synthetase gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3133 VAA049_3134 VAA049_3134 VAA049_3134 3480824 3483679 - insulinase family protein [R] COG0612 Predicted Zn-dependent peptidases gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3134 VAA049_3135 VAA049_3135 VAA049_3135 3483689 3484150 - hypothetical protein conserved hypothetical protein~[S] COG1238 Predicted membrane protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3135 VAA049_3136 VAA049_3136 VAA049_3136 3484144 3485094 - zinc-binding dehydrogenase family protein [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3136 VAA049_3137 VAA049_3137 VAA049_3137 3485217 3486347 - sodium ion-translocating decarboxylase%2C beta subunit na_pump_decarbB: sodium ion-translocating decarboxylase%2C beta subunit~[C] COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase%2C beta subunit gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3137 VAA049_3138 VAA049_3138 oadA oadA 3486357 3488144 - oxaloacetate decarboxylase alpha subunit oadA: oxaloacetate decarboxylase alpha subunit~[C] COG5016 Pyruvate/oxaloacetate carboxyltransferase gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3138 VAA049_3139 VAA049_3139 VAA049_3139 3488179 3488439 - sodium pump decarboxylase%2C gamma subunit oadG_fam: sodium pump decarboxylase%2C gamma subunit~[C] COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase%2C gamma subunit gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3139 VAA049_314 VAA049_314 VAA049_314 334406 334711 + ribosomal S14p/S29e family protein [J] COG0199 Ribosomal protein S14 gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_314 VAA049_3140 VAA049_3140 VAA049_3140 3488806 3488882 - tRNA-Arg tRNA gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3140 VAA049_3141 VAA049_3141 VAA049_3141 3488954 3489030 - tRNA-Arg tRNA gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3141 VAA049_3142 VAA049_3142 VAA049_3142 3489086 3489162 - tRNA-Arg tRNA gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3142 VAA049_3143 VAA049_3143 VAA049_3143 3489235 3489311 - tRNA-Arg tRNA gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3143 VAA049_3144 VAA049_3144 VAA049_3144 3489367 3489443 - tRNA-Arg tRNA gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3144 VAA049_3145 VAA049_3145 VAA049_3145 3489510 3489602 - tRNA-Ser tRNA gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3145 VAA049_3146 VAA049_3146 VAA049_3146 3489625 3489701 - tRNA-Arg tRNA gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3146 VAA049_3147 VAA049_3147 VAA049_3147 3489735 3489827 - tRNA-Ser tRNA gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3147 VAA049_3148 VAA049_3148 csrA csrA 3490009 3490206 - carbon storage regulator csrA: carbon storage regulator~[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3148 VAA049_3149 VAA049_3149 VAA049_3149 3490298 3491425 - aspartate kinase domain protein asp_kinase: aspartate kinase domain protein~[E] COG0527 Aspartokinases gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3149 VAA049_315 VAA049_315 rpsH rpsH 334741 335133 + 30S ribosomal protein S8 [J] COG0096 Ribosomal protein S8 gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_315 VAA049_3150 VAA049_3150 alaS alaS 3491689 3494271 - alanine--tRNA ligase alaS: alanine--tRNA ligase~[J] COG0013 Alanyl-tRNA synthetase gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3150 VAA049_3151 VAA049_3151 VAA049_3151 3494444 3494902 - recX family protein [R] COG2137 Uncharacterized protein conserved in bacteria gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3151 VAA049_3152 VAA049_3152 recA recA 3495035 3496099 - protein RecA tigrfam_recA: protein RecA~[L] COG0468 RecA/RadA recombinase gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3152 VAA049_3153 VAA049_3153 VAA049_3153 3496233 3496739 - amidohydrolase%2C PncC family domain protein pncC_: amidohydrolase%2C PncC family domain protein~[R] COG1546 Uncharacterized protein (competence- and mitomycin-induced) gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3153 VAA049_3154 VAA049_3154 cysA cysA 3496906 3498036 - sulfate ABC transporter%2C ATP-binding family protein 3a0106s01: sulfate ABC transporter%2C ATP-binding family protein~[P] COG1118 ABC-type sulfate/molybdate transport systems%2C ATPase component gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3154 VAA049_3155 VAA049_3155 cysW cysW 3498033 3498896 - sulfate ABC transporter%2C permease protein CysW permease_CysW: sulfate ABC transporter%2C permease protein CysW~[P] COG4208 ABC-type sulfate transport system%2C permease component gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3155 VAA049_3156 VAA049_3156 cysT cysT 3498907 3499758 - sulfate ABC transporter%2C permease protein CysT permease_CysT: sulfate ABC transporter%2C permease protein CysT~[O] COG0555 ABC-type sulfate transport system%2C permease component gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3156 VAA049_3157 VAA049_3157 VAA049_3157 3499835 3500836 - sulfate ABC transporter%2C sulfate-binding family protein 3a0106s03: sulfate ABC transporter%2C sulfate-binding family protein~[P] COG4150 ABC-type sulfate transport system%2C periplasmic component gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3157 VAA049_3158 VAA049_3158 cysM cysM 3501093 3501980 + cysteine synthase B cysM: cysteine synthase B~[E] COG0031 Cysteine synthase gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3158 VAA049_3159 VAA049_3159 mutS mutS 3502251 3504836 + DNA mismatch repair protein MutS mutS1: DNA mismatch repair protein MutS~[L] COG0249 Mismatch repair ATPase (MutS family) gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3159 VAA049_316 VAA049_316 rplF rplF 335148 335681 + ribosomal protein L6 L6_bact: ribosomal protein L6~[J] COG0097 Ribosomal protein L6P/L9E gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_316 VAA049_3160 VAA049_3160 rpoS rpoS 3504930 3505937 - RNA polymerase sigma factor RpoS rpoS_proteo: RNA polymerase sigma factor RpoS~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3160 VAA049_3161 VAA049_3161 VAA049_3161 3506011 3506946 - lysM domain protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3161 VAA049_3162 VAA049_3162 pcm pcm 3506946 3507572 - protein-L-isoaspartate O-methyltransferase pimt: protein-L-isoaspartate O-methyltransferase~[O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3162 VAA049_3163 VAA049_3163 surE surE 3507565 3508317 - 5'/3'-nucleotidase SurE surE: 5'/3'-nucleotidase SurE~[R] COG0496 Predicted acid phosphatase gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3163 VAA049_3164 VAA049_3164 VAA049_3164 3508319 3509404 - tRNA pseudouridine synthase%2C TruD family protein tRNA_TruD_broad: tRNA pseudouridine synthase%2C TruD family protein~[S] COG0585 Uncharacterized conserved protein gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3164 VAA049_3165 VAA049_3165 ispF ispF 3509434 3509910 - 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase ispF: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~[I] COG0245 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3165 VAA049_3166 VAA049_3166 ispD ispD 3509907 3510605 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~[I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3166 VAA049_3167 VAA049_3167 ftsB ftsB 3510602 3510886 - cell division protein ftsB [D] COG2919 Septum formation initiator gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3167 VAA049_3168 VAA049_3168 uppP uppP 3511001 3511804 - undecaprenyl-diphosphatase UppP undec_PP_bacA: undecaprenyl-diphosphatase UppP~[V] COG1968 Uncharacterized bacitracin resistance protein gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3168 VAA049_3169 VAA049_3169 folK folK 3511801 3512307 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase~[H] COG0801 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3169 VAA049_317 VAA049_317 rplR rplR 335691 336044 + ribosomal protein L18 L18_bact: ribosomal protein L18~[J] COG0256 Ribosomal protein L18 gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_317 VAA049_3170 VAA049_3170 folB folB 3512304 3512657 - dihydroneopterin aldolase folB: dihydroneopterin aldolase~[H] COG1539 Dihydroneopterin aldolase gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3170 VAA049_3171 VAA049_3171 plsY plsY 3512846 3513472 + acyl-phosphate glycerol 3-phosphate acyltransferase [S] COG0344 Predicted membrane protein gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3171 VAA049_3172 VAA049_3172 VAA049_3172 3513521 3514333 - alpha/beta hydrolase family protein [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3172 VAA049_3173 VAA049_3173 tsaD tsaD 3514487 3515506 - tRNA threonylcarbamoyl adenosine modification protein TsaD T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD~[O] COG0533 Metal-dependent proteases with possible chaperone activity gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3173 VAA049_3174 VAA049_3174 rpsU rpsU 3515747 3515962 + ribosomal protein S21 S21p: ribosomal protein S21~[J] COG0828 Ribosomal protein S21 gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3174 VAA049_3175 VAA049_3175 VAA049_3175 3515992 3516435 + yqey-like family protein [S] COG1610 Uncharacterized conserved protein gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3175 VAA049_3176 VAA049_3176 dnaG dnaG 3516525 3518288 + DNA primase dnaG: DNA primase~[L] COG0358 DNA primase (bacterial type) gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3176 VAA049_3177 VAA049_3177 rpoD rpoD 3518387 3520264 + RNA polymerase sigma factor RpoD rpoD_Cterm: RNA polymerase sigma factor RpoD~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3177 VAA049_3178 VAA049_3178 VAA049_3178 3520409 3520484 + tRNA-Met tRNA gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3178 VAA049_3179 VAA049_3179 VAA049_3179 3520953 3522713 + acyltransferase family protein [R] COG3176 Putative hemolysin gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3179 VAA049_318 VAA049_318 rpsE rpsE 336059 336562 + ribosomal protein S5 rpsE_bact: ribosomal protein S5~[J] COG0098 Ribosomal protein S5 gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_318 VAA049_3180 VAA049_3180 VAA049_3180 3522970 3524049 + bacterial extracellular solute-binding%2C 7 family protein [Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system%2C periplasmic component gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3180 VAA049_3181 VAA049_3181 glmS glmS 3524110 3525942 - glutamine-fructose-6-phosphate transaminase glmS: glutamine-fructose-6-phosphate transaminase~[M] COG0449 Glucosamine 6-phosphate synthetase%2C contains amidotransferase and phosphosugar isomerase domains gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3181 VAA049_3182 VAA049_3182 VAA049_3182 3526005 3526775 - deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3182 VAA049_3183 VAA049_3183 pyk pyk 3527203 3528615 + pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3183 VAA049_3184 VAA049_3184 VAA049_3184 3528688 3528819 - putative membrane protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3184 VAA049_3185 VAA049_3185 VAA049_3185 3529150 3529845 - hypothetical protein conserved hypothetical protein~[S] COG2968 Uncharacterized conserved protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3185 VAA049_3186 VAA049_3186 argP argP 3529946 3530842 - transcriptional regulator%2C ArgP family protein argP: transcriptional regulator%2C ArgP family protein~[K] COG0583 Transcriptional regulator gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3186 VAA049_3187 VAA049_3187 VAA049_3187 3531007 3531642 + lysE type translocator family protein [R] COG1279 Lysine efflux permease gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3187 VAA049_3188 VAA049_3188 VAA049_3188 3531706 3532569 - mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3188 VAA049_3189 VAA049_3189 fbaA fbaA 3532865 3533941 - fructose-bisphosphate aldolase%2C class II fruBisAldo_II_A: fructose-bisphosphate aldolase%2C class II~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3189 VAA049_319 VAA049_319 rpmD rpmD 336569 336745 + ribosomal protein L30 rpmD_bact: ribosomal protein L30~[J] COG1841 Ribosomal protein L30/L7E gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_319 VAA049_3190 VAA049_3190 VAA049_3190 3534097 3535260 - phosphoglycerate kinase family protein [G] COG0126 3-phosphoglycerate kinase gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3190 VAA049_3191 VAA049_3191 epd epd 3535409 3536434 - erythrose-4-phosphate dehydrogenase E4PD_g-proteo: erythrose-4-phosphate dehydrogenase~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3191 VAA049_3192 VAA049_3192 VAA049_3192 3536586 3538529 - tonB dependent receptor family protein [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3192 VAA049_3193 VAA049_3193 VAA049_3193 3538674 3539570 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3193 VAA049_3194 VAA049_3194 tkt tkt 3539637 3541634 - transketolase tktlase_bact: transketolase~[G] COG0021 Transketolase gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3194 VAA049_3195 VAA049_3195 metK metK 3541964 3543121 + methionine adenosyltransferase metK: methionine adenosyltransferase~[H] COG0192 S-adenosylmethionine synthetase gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3195 VAA049_3196 VAA049_3196 VAA049_3196 3543243 3543731 + sprT-like family protein [S] COG3091 Uncharacterized protein conserved in bacteria gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3196 VAA049_3197 VAA049_3197 dns dns 3543859 3544554 + extracellular deoxyribonuclease [L] COG2356 Endonuclease I gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3197 VAA049_3198 VAA049_3198 VAA049_3198 3544693 3545424 + RNA methyltransferase%2C RsmE family protein [S] COG1385 Uncharacterized protein conserved in bacteria gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3198 VAA049_3199 VAA049_3199 gshB gshB 3545438 3546394 + glutathione synthase glut_syn: glutathione synthase~[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3199 VAA049_32 VAA049_32 rsmB rsmB 34644 35924 - 16S rRNA (cytosine(967)-C(5))-methyltransferase rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase~[J] COG0144 tRNA and rRNA cytosine-C5-methylases gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_32 VAA049_320 VAA049_320 rplO rplO 336751 337185 + ribosomal protein L15 rplO_bact: ribosomal protein L15~[J] COG0200 Ribosomal protein L15 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_320 VAA049_3200 VAA049_3200 VAA049_3200 3546430 3546993 + hypothetical protein conserved hypothetical protein~[K] COG1678 Putative transcriptional regulator gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3200 VAA049_3201 VAA049_3201 VAA049_3201 3547074 3547496 + hypothetical protein conserved hypothetical protein~[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3201 VAA049_3202 VAA049_3202 tyrS tyrS 3547534 3548814 - tyrosine--tRNA ligase tyrS: tyrosine--tRNA ligase~[J] COG0162 Tyrosyl-tRNA synthetase gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3202 VAA049_3203 VAA049_3203 VAA049_3203 3548923 3549720 - bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3203 VAA049_3204 VAA049_3204 VAA049_3204 3549839 3550945 - twitching motility family protein pilT_fam: twitching motility family protein~[NU] COG5008 Tfp pilus assembly protein%2C ATPase PilU gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3204 VAA049_3205 VAA049_3205 VAA049_3205 3550960 3551997 - twitching motility family protein pilT_fam: twitching motility family protein~[NU] COG2805 Tfp pilus assembly protein%2C pilus retraction ATPase PilT gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3205 VAA049_3206 VAA049_3206 VAA049_3206 3552023 3552733 + hypothetical protein alanine racemase%2C N-terminal domain protein~[R] COG0325 Predicted enzyme with a TIM-barrel fold gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3206 VAA049_3207 VAA049_3207 proC proC 3552786 3553604 + pyrroline-5-carboxylate reductase proC: pyrroline-5-carboxylate reductase~[E] COG0345 Pyrroline-5-carboxylate reductase gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3207 VAA049_3208 VAA049_3208 VAA049_3208 3553658 3554215 + YGGT family protein [S] COG0762 Predicted integral membrane protein gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3208 VAA049_3209 VAA049_3209 VAA049_3209 3554215 3554505 + hypothetical protein conserved hypothetical protein~[S] COG1872 Uncharacterized conserved protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3209 VAA049_321 VAA049_321 secY secY 337206 338540 + preprotein translocase%2C SecY subunit 3a0501s007: preprotein translocase%2C SecY subunit~[U] COG0201 Preprotein translocase subunit SecY gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_321 VAA049_3210 VAA049_3210 VAA049_3210 3554551 3554982 + hypothetical protein conserved hypothetical protein gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3210 VAA049_3211 VAA049_3211 rdgB rdgB 3555052 3555654 + non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family [F] COG0127 Xanthosine triphosphate pyrophosphatase gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3211 VAA049_3212 VAA049_3212 VAA049_3212 3555648 3556823 + radical SAM superfamily protein [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3212 VAA049_3213 VAA049_3213 glsA glsA 3557058 3557978 - glutaminase A gln_ase: glutaminase A~[E] COG2066 Glutaminase gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3213 VAA049_3214 VAA049_3214 trmB trmB 3558089 3558808 - tRNA (guanine-N(7)-)-methyltransferase [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3214 VAA049_3215 VAA049_3215 mutY mutY 3559048 3560109 + A/G-specific adenine glycosylase mutY: A/G-specific adenine glycosylase~[L] COG1194 A/G-specific DNA glycosylase gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3215 VAA049_3216 VAA049_3216 VAA049_3216 3560123 3560395 + putative Fe(2+)-trafficking protein [CO] COG2924 Fe-S cluster protector protein gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3216 VAA049_3217 VAA049_3217 VAA049_3217 3560497 3561624 + hypothetical protein conserved hypothetical protein~[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3217 VAA049_3218 VAA049_3218 VAA049_3218 3561734 3561809 + tRNA-Phe tRNA gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3218 VAA049_3219 VAA049_3219 VAA049_3219 3561858 3561933 + tRNA-Thr tRNA gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3219 VAA049_322 VAA049_322 rpmJ rpmJ 338579 338692 + ribosomal protein L36 rpmJ_bact: ribosomal protein L36~[J] COG0257 Ribosomal protein L36 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_322 VAA049_3220 VAA049_3220 VAA049_3220 3561944 3562019 + tRNA-Phe tRNA gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3220 VAA049_3221 VAA049_3221 VAA049_3221 3562057 3562132 + tRNA-Asn tRNA gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3221 VAA049_3222 VAA049_3222 VAA049_3222 3562388 3564013 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3222 VAA049_3223 VAA049_3223 VAA049_3223 3564428 3564503 + tRNA-Phe tRNA gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3223 VAA049_3224 VAA049_3224 VAA049_3224 3564545 3564620 + tRNA-Thr tRNA gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3224 VAA049_3225 VAA049_3225 VAA049_3225 3564636 3564711 + tRNA-Asn tRNA gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3225 VAA049_3226 VAA049_3226 VAA049_3226 3564740 3564815 + tRNA-Thr tRNA gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3226 VAA049_3227 VAA049_3227 VAA049_3227 3564830 3564905 + tRNA-Asn tRNA gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3227 VAA049_3228 VAA049_3228 VAA049_3228 3565060 3565914 - dnaJ domain protein [O] COG1076 DnaJ-domain-containing proteins 1 gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3228 VAA049_3229 VAA049_3229 VAA049_3229 3566073 3568424 + organic solvent tolerance family protein [M] COG1452 Organic solvent tolerance protein OstA gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3229 VAA049_323 VAA049_323 rpsM rpsM 338842 339198 + 30S ribosomal protein S13 bact_S13: 30S ribosomal protein S13~[J] COG0099 Ribosomal protein S13 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_323 VAA049_3230 VAA049_3230 VAA049_3230 3568477 3569772 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3230 VAA049_3231 VAA049_3231 pdxA pdxA 3569762 3570754 + 4-hydroxythreonine-4-phosphate dehydrogenase PdxA pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA~[H] COG1995 Pyridoxal phosphate biosynthesis protein gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3231 VAA049_3232 VAA049_3232 rsmA rsmA 3570768 3571583 + ribosomal RNA small subunit methyltransferase A ksgA: ribosomal RNA small subunit methyltransferase A~[J] COG0030 Dimethyladenosine transferase (rRNA methylation) gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3232 VAA049_3233 VAA049_3233 apaG apaG 3571655 3572035 + protein ApaG [P] COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3233 VAA049_3234 VAA049_3234 apaH apaH 3572046 3572855 + Diadenosine tetraphosphatase apaH: bis~[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases%3B bis gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3234 VAA049_3235 VAA049_3235 VAA049_3235 3573004 3573501 - dihydrofolate reductase family protein [H] COG0262 Dihydrofolate reductase gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3235 VAA049_3236 VAA049_3236 VAA049_3236 3573514 3573987 - hypothetical protein conserved hypothetical protein~[S] COG3610 Uncharacterized conserved protein gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3236 VAA049_3237 VAA049_3237 VAA049_3237 3573987 3574748 - hypothetical protein conserved hypothetical protein~[S] COG2966 Uncharacterized conserved protein gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3237 VAA049_3238 VAA049_3238 cgtA cgtA 3574870 3576042 - Obg family GTPase CgtA obg_CgtA: Obg family GTPase CgtA~[R] COG0536 Predicted GTPase gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3238 VAA049_3239 VAA049_3239 rpmA rpmA 3576244 3576504 - ribosomal protein L27 L27: ribosomal protein L27~[J] COG0211 Ribosomal protein L27 gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3239 VAA049_324 VAA049_324 rpsK rpsK 339218 339607 + 30S ribosomal protein S11 bact_S11: 30S ribosomal protein S11~[J] COG0100 Ribosomal protein S11 gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_324 VAA049_3240 VAA049_3240 rplU rplU 3576525 3576836 - ribosomal protein L21 L21: ribosomal protein L21~[J] COG0261 Ribosomal protein L21 gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3240 VAA049_3241 VAA049_3241 VAA049_3241 3577107 3578078 + polyprenyl synthetase family protein [H] COG0142 Geranylgeranyl pyrophosphate synthase gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3241 VAA049_3242 VAA049_3242 VAA049_3242 3578227 3579633 - transporter%2C basic amino acid/polyamine antiporter family protein 2A0302: transporter%2C basic amino acid/polyamine antiporter family protein~[E] COG0531 Amino acid transporters gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3242 VAA049_3243 VAA049_3243 mdh mdh 3580107 3581042 - malate dehydrogenase%2C NAD-dependent MDH_euk_gproteo: malate dehydrogenase%2C NAD-dependent~[C] COG0039 Malate/lactate dehydrogenases gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3243 VAA049_3244 VAA049_3244 argR argR 3581370 3581840 + arginine repressor argR_whole: arginine repressor~[K] COG1438 Arginine repressor gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3244 VAA049_3245 VAA049_3245 VAA049_3245 3582164 3583132 + TRAP transporter solute receptor%2C TAXI family protein TRAP_TAXI: TRAP transporter solute receptor%2C TAXI family protein~[R] COG2358 TRAP-type uncharacterized transport system%2C periplasmic component gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3245 VAA049_3246 VAA049_3246 VAA049_3246 3583303 3585867 + TRAP transporter%2C 4TM/12TM fusion family protein TRAP_fused: TRAP transporter%2C 4TM/12TM fusion family protein~[R] COG4666 TRAP-type uncharacterized transport system%2C fused permease components gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3246 VAA049_3247 VAA049_3247 VAA049_3247 3585989 3586426 + universal stress family protein [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3247 VAA049_3248 VAA049_3248 VAA049_3248 3586577 3586960 + hypothetical protein conserved hypothetical protein~[S] COG3205 Predicted membrane protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3248 VAA049_3249 VAA049_3249 VAA049_3249 3587029 3587826 - hypothetical protein conserved hypothetical protein gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3249 VAA049_325 VAA049_325 rpsD rpsD 339635 340255 + ribosomal protein S4 rpsD_bact: ribosomal protein S4~[J] COG0522 Ribosomal protein S4 and related proteins gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_325 VAA049_3250 VAA049_3250 VAA049_3250 3587973 3588395 - hypothetical protein conserved hypothetical protein~[S] COG3076 Uncharacterized protein conserved in bacteria gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3250 VAA049_3251 VAA049_3251 VAA049_3251 3588365 3588562 - hypothetical protein gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3251 VAA049_3252 VAA049_3252 arcA arcA 3589122 3590345 + arginine deiminase arcA: arginine deiminase~[E] COG2235 Arginine deiminase gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3252 VAA049_3253 VAA049_3253 VAA049_3253 3590441 3591886 - modulator of DNA gyrase family protein [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3253 VAA049_3254 VAA049_3254 VAA049_3254 3591886 3592713 - carbon-nitrogen hydrolase family protein [R] COG0388 Predicted amidohydrolase gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3254 VAA049_3255 VAA049_3255 VAA049_3255 3592722 3596561 - hypothetical protein conserved hypothetical protein~[S] COG3164 Predicted membrane protein gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3255 VAA049_3256 VAA049_3256 VAA049_3256 3596610 3598079 - ribonuclease%2C Rne/Rng family domain protein RNaseEG: ribonuclease%2C Rne/Rng family domain protein~[J] COG1530 Ribonucleases G and E gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3256 VAA049_3257 VAA049_3257 maf maf 3598105 3598668 - septum formation protein Maf maf: septum formation protein Maf~[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3257 VAA049_3258 VAA049_3258 mreD mreD 3598665 3599153 - rod shape-determining protein MreD shape_MreD: rod shape-determining protein MreD~[M] COG2891 Cell shape-determining protein gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3258 VAA049_3259 VAA049_3259 mreC mreC 3599140 3600030 - rod shape-determining protein MreC mreC: rod shape-determining protein MreC~[M] COG1792 Cell shape-determining protein gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3259 VAA049_326 VAA049_326 rpoA rpoA 340280 341272 + DNA-directed RNA polymerase%2C alpha subunit rpoA: DNA-directed RNA polymerase%2C alpha subunit~[K] COG0202 DNA-directed RNA polymerase%2C alpha subunit/40 kD subunit gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_326 VAA049_3260 VAA049_3260 mreB mreB 3600087 3601130 - rod shape-determining protein mreB [D] COG1077 Actin-like ATPase involved in cell morphogenesis gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3260 VAA049_3261 VAA049_3261 VAA049_3261 3601298 3605044 - putative mshQ gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3261 VAA049_3262 VAA049_3262 VAA049_3262 3605037 3605456 - putative mshP protein gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3262 VAA049_3263 VAA049_3263 VAA049_3263 3605428 3606198 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3263 VAA049_3264 VAA049_3264 VAA049_3264 3606198 3606767 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3264 VAA049_3265 VAA049_3265 VAA049_3265 3606757 3607245 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3265 VAA049_3266 VAA049_3266 VAA049_3266 3607282 3607809 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3266 VAA049_3267 VAA049_3267 VAA049_3267 3607844 3608398 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3267 VAA049_3268 VAA049_3268 VAA049_3268 3608479 3608931 - putative mSHA biogenesis protein MshF gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3268 VAA049_3269 VAA049_3269 VAA049_3269 3608934 3610157 - type II secretion system (T2SS)%2C F family protein [NU] COG1459 Type II secretory pathway%2C component PulF gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3269 VAA049_327 VAA049_327 rplQ rplQ 341299 341685 + ribosomal protein L17 L17: ribosomal protein L17~[J] COG0203 Ribosomal protein L17 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_327 VAA049_3270 VAA049_3270 VAA049_3270 3610166 3611891 - type II/IV secretion system family protein pseudogene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3270 VAA049_3272 VAA049_3272 VAA049_3272 3611881 3613032 - TPR repeat family protein gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3272 VAA049_3273 VAA049_3273 VAA049_3273 3613029 3613874 - hypothetical protein conserved hypothetical protein~[U] COG3267 Type II secretory pathway%2C component ExeA (predicted ATPase) gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3273 VAA049_3274 VAA049_3274 VAA049_3274 3613879 3615558 - pilus (MSHA type) biogenesis protein MshL pilus_MshL: pilus (MSHA type) biogenesis protein MshL~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3274 VAA049_3275 VAA049_3275 VAA049_3275 3615573 3615890 - type IV pilus biogenesis family protein gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3275 VAA049_3276 VAA049_3276 VAA049_3276 3615883 3616533 - type II secretion system (T2SS)%2C M family protein gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3276 VAA049_3277 VAA049_3277 VAA049_3277 3616530 3617969 - putative mSHA biogenesis protein MshI gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3277 VAA049_3278 VAA049_3278 VAA049_3278 3617982 3619994 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3278 VAA049_3279 VAA049_3279 ssb ssb 3620118 3620654 - single-stranded DNA-binding protein [L] COG0629 Single-stranded DNA-binding protein gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3279 VAA049_328 VAA049_328 VAA049_328 341829 342305 - hypothetical protein conserved hypothetical protein gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_328 VAA049_3280 VAA049_3280 VAA049_3280 3620946 3621590 + bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3280 VAA049_3281 VAA049_3281 galU galU 3621763 3622635 + UTP--glucose-1-phosphate uridylyltransferase galU: UTP--glucose-1-phosphate uridylyltransferase~[M] COG1210 UDP-glucose pyrophosphorylase gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3281 VAA049_3282 VAA049_3282 uvrA uvrA 3622791 3625613 + excinuclease ABC subunit A uvra: excinuclease ABC subunit A~[L] COG0178 Excinuclease ATPase subunit gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3282 VAA049_3283 VAA049_3283 VAA049_3283 3625678 3627462 + hypothetical protein conserved hypothetical protein~[M] COG3307 Lipid A core - O-antigen ligase and related enzymes gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3283 VAA049_3284 VAA049_3284 VAA049_3284 3627541 3628659 - aminotransferase class-V family protein [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3284 VAA049_3285 VAA049_3285 VAA049_3285 3629123 3630478 + aspartate kinase%2C monofunctional class asp_kin_monofn: aspartate kinase%2C monofunctional class~[E] COG0527 Aspartokinases gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3285 VAA049_3286 VAA049_3286 metH metH 3631018 3634698 - methionine synthase metH: methionine synthase~[E] COG1410 Methionine synthase I%2C cobalamin-binding domain gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3286 VAA049_3287 VAA049_3287 VAA049_3287 3634895 3636229 + sodium/hydrogen exchanger family protein [P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3287 VAA049_3288 VAA049_3288 VAA049_3288 3636723 3636799 - tRNA-Asp tRNA gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3288 VAA049_3289 VAA049_3289 VAA049_3289 3636825 3636937 - 5S ribosomal RNA rRNA gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3289 VAA049_329 VAA049_329 VAA049_329 342447 343067 - domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_329 VAA049_3290 VAA049_3290 VAA049_3290 3637071 3639953 - 23S ribosomal RNA rRNA gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3290 VAA049_3291 VAA049_3291 VAA049_3291 3640244 3640319 - tRNA-Ala tRNA gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3291 VAA049_3292 VAA049_3292 VAA049_3292 3640325 3640400 - tRNA-Val tRNA gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3292 VAA049_3293 VAA049_3293 VAA049_3293 3640431 3640505 - tRNA-Lys tRNA gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3293 VAA049_3294 VAA049_3294 VAA049_3294 3640525 3640600 - tRNA-Glu tRNA gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3294 VAA049_3295 VAA049_3295 VAA049_3295 3640675 3642203 - 16S ribosomal RNA rRNA gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3295 VAA049_3296 VAA049_3296 VAA049_3296 3642570 3642682 - 5S ribosomal RNA rRNA gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3296 VAA049_3297 VAA049_3297 VAA049_3297 3642816 3645698 - 23S ribosomal RNA rRNA gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3297 VAA049_3298 VAA049_3298 VAA049_3298 3645989 3646064 - tRNA-Ala tRNA gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3298 VAA049_3299 VAA049_3299 VAA049_3299 3646073 3646149 - tRNA-Ile tRNA gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3299 VAA049_33 VAA049_33 fmt fmt 35980 36927 - methionyl-tRNA formyltransferase fmt: methionyl-tRNA formyltransferase~[J] COG0223 Methionyl-tRNA formyltransferase gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_33 VAA049_330 VAA049_330 VAA049_330 343809 344702 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_330 VAA049_3300 VAA049_3300 VAA049_3300 3646218 3647746 - 16S ribosomal RNA rRNA gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3300 VAA049_3301 VAA049_3301 cysH cysH 3648309 3649070 - phosphoadenosine phosphosulfate reductase PAPS_reductase: phosphoadenosine phosphosulfate reductase~[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3301 VAA049_3302 VAA049_3302 cysI cysI 3649063 3650796 - sulfite reductase (NADPH) hemoprotein%2C beta-component cysI: sulfite reductase (NADPH) hemoprotein%2C beta-component~[P] COG0155 Sulfite reductase%2C beta subunit (hemoprotein) gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3302 VAA049_3303 VAA049_3303 VAA049_3303 3650796 3652619 - sulfite reductase [NADPH] flavoprotein%2C alpha-component cysJ: sulfite reductase [NADPH] flavoprotein%2C alpha-component~[P] COG0369 Sulfite reductase%2C alpha subunit (flavoprotein) gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3303 VAA049_3304 VAA049_3304 VAA049_3304 3652726 3652956 - putative thymidylate kinase gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3304 VAA049_3305 VAA049_3305 VAA049_3305 3653077 3653742 - outer membrane family protein OMP_w_GlyGly: outer membrane family protein gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3305 VAA049_3306 VAA049_3306 pspG pspG 3653831 3654043 - phage shock protein G phageshock_pspG: phage shock protein G gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3306 VAA049_3307 VAA049_3307 dusA dusA 3654203 3655186 - tRNA dihydrouridine synthase A family protein yjbN: tRNA dihydrouridine synthase A family protein~[J] COG0042 tRNA-dihydrouridine synthase gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3307 VAA049_3308 VAA049_3308 VAA049_3308 3655544 3656008 + ferric uptake regulator family protein [P] COG0735 Fe2+/Zn2+ uptake regulation proteins gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3308 VAA049_3309 VAA049_3309 VAA049_3309 3656018 3656479 + cheC domain protein [N] COG1406 Predicted inhibitor of MCP methylation%2C homolog of CheC gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3309 VAA049_331 VAA049_331 VAA049_331 343293 343859 + hypothetical protein opacity-associated A N-terminal motif family protein~[M] COG3061 Cell envelope opacity-associated protein A gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_331 VAA049_3310 VAA049_3310 VAA049_3310 3656596 3657774 - beta-lactamase superfamily domain protein [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3310 VAA049_3311 VAA049_3311 VAA049_3311 3657977 3659629 - phosphoglucose isomerase family protein [G] COG0166 Glucose-6-phosphate isomerase gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3311 VAA049_3312 VAA049_3312 VAA049_3312 3659914 3660333 + hypothetical protein conserved hypothetical protein~[S] COG0432 Uncharacterized conserved protein gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3312 VAA049_3313 VAA049_3313 alr alr 3660417 3661511 - alanine racemase alr: alanine racemase~[M] COG0787 Alanine racemase gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3313 VAA049_3314 VAA049_3314 dnaB dnaB 3661516 3662922 - replicative DNA helicase dnaB: replicative DNA helicase~[L] COG0305 Replicative DNA helicase gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3314 VAA049_3315 VAA049_3315 VAA049_3315 3663093 3663857 + hypothetical protein conserved hypothetical protein~[M] COG3137 Putative salt-induced outer membrane protein gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3315 VAA049_3316 VAA049_3316 rplI rplI 3663920 3664369 - ribosomal protein L9 L9: ribosomal protein L9~[J] COG0359 Ribosomal protein L9 gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3316 VAA049_3317 VAA049_3317 rpsR rpsR 3664403 3664630 - ribosomal protein S18 S18: ribosomal protein S18~[J] COG0238 Ribosomal protein S18 gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3317 VAA049_3318 VAA049_3318 VAA049_3318 3664646 3664948 - single-strand binding family protein [L] COG2965 Primosomal replication protein N gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3318 VAA049_3319 VAA049_3319 rpsF rpsF 3664956 3665324 - ribosomal protein S6 S6: ribosomal protein S6~[J] COG0360 Ribosomal protein S6 gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3319 VAA049_332 VAA049_332 VAA049_332 344705 345154 - acetyltransferase family protein [R] COG2153 Predicted acyltransferase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_332 VAA049_3320 VAA049_3320 bfr bfr 3665536 3666012 - bacterioferritin bfr: bacterioferritin~[P] COG2193 Bacterioferritin (cytochrome b1) gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3320 VAA049_3321 VAA049_3321 bfd bfd 3666082 3666270 - bacterioferritin-associated ferredoxin [P] COG2906 Bacterioferritin-associated ferredoxin gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3321 VAA049_3322 VAA049_3322 tuf tuf 3666574 3667758 - translation elongation factor Tu EF-Tu: translation elongation factor Tu~[J] COG0050 GTPases - translation elongation factors gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3322 VAA049_3323 VAA049_3323 fusA fusA 3667881 3669977 - translation elongation factor G EF-G: translation elongation factor G~[J] COG0480 Translation elongation factors (GTPases) gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3323 VAA049_3324 VAA049_3324 rpsG rpsG 3670053 3670523 - ribosomal protein S7 rpsG_bact: ribosomal protein S7~[J] COG0049 Ribosomal protein S7 gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3324 VAA049_3325 VAA049_3325 rpsL rpsL 3670639 3671013 - ribosomal protein S12 rpsL_bact: ribosomal protein S12~[J] COG0048 Ribosomal protein S12 gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3325 VAA049_3326 VAA049_3326 dsrH dsrH 3671198 3671473 - sulfur relay protein TusB/DsrH sulf_tusB_dsrH: sulfur relay protein TusB/DsrH~[P] COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3326 VAA049_3327 VAA049_3327 tusC tusC 3671483 3671839 - sulfur relay protein TusC/DsrF sulf_tusC_dsrF: sulfur relay protein TusC/DsrF~[P] COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3327 VAA049_3328 VAA049_3328 VAA049_3328 3671836 3672231 - dsrE/DsrF-like family protein [P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3328 VAA049_3329 VAA049_3329 VAA049_3329 3672228 3672944 - HTH domain protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3329 VAA049_333 VAA049_333 VAA049_333 345380 346762 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_333 VAA049_3330 VAA049_3330 VAA049_3330 3673149 3673928 - domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3330 VAA049_3331 VAA049_3331 VAA049_3331 3674068 3675048 + WD domain%2C G-beta repeat family protein [R] COG2319 FOG: WD40 repeat gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3331 VAA049_3332 VAA049_3332 VAA049_3332 3675051 3675278 + slyX family protein [S] COG2900 Uncharacterized protein conserved in bacteria gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3332 VAA049_3333 VAA049_3333 VAA049_3333 3675319 3675507 - hypothetical protein conserved hypothetical protein~[S] COG3242 Uncharacterized protein conserved in bacteria gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3333 VAA049_3334 VAA049_3334 hflC hflC 3675568 3676548 - HflC protein hflC: HflC protein~[O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3334 VAA049_3335 VAA049_3335 hflK hflK 3676551 3677738 - HflK protein hflK: HflK protein~[O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3335 VAA049_3336 VAA049_3336 hflX hflX 3677784 3679073 - GTP-binding protein HflX GTP_HflX: GTP-binding protein HflX~[R] COG2262 GTPases gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3336 VAA049_3337 VAA049_3337 hfq hfq 3679078 3679368 - RNA chaperone Hfq hfq: RNA chaperone Hfq~[R] COG1923 Uncharacterized host factor I protein gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3337 VAA049_3338 VAA049_3338 miaA miaA 3679540 3680487 - tRNA dimethylallyltransferase miaA: tRNA dimethylallyltransferase~[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3338 VAA049_3339 VAA049_3339 mutL mutL 3680484 3682445 - DNA mismatch repair MutL family protein mutl: DNA mismatch repair MutL family protein~[L] COG0323 DNA mismatch repair enzyme (predicted ATPase) gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3339 VAA049_334 VAA049_334 VAA049_334 346765 347334 - cyclic nucleotide-binding domain protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_334 VAA049_3340 VAA049_3340 VAA049_3340 3682452 3684170 - N-acetylmuramoyl-L-alanine amidase family protein [M] COG0860 N-acetylmuramoyl-L-alanine amidase gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3340 VAA049_3341 VAA049_3341 VAA049_3341 3684164 3684628 - tRNA threonylcarbamoyl adenosine modification protein YjeE T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE~[R] COG0802 Predicted ATPase or kinase gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3341 VAA049_3342 VAA049_3342 queG queG 3684833 3685942 + epoxyqueuosine reductase [C] COG1600 Uncharacterized Fe-S protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3342 VAA049_3343 VAA049_3343 VAA049_3343 3686512 3686588 - tRNA-Met tRNA gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3343 VAA049_3344 VAA049_3344 VAA049_3344 3686631 3686707 - tRNA-Met tRNA gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3344 VAA049_3345 VAA049_3345 VAA049_3345 3686750 3686826 - tRNA-Met tRNA gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3345 VAA049_3346 VAA049_3346 VAA049_3346 3687013 3687088 - tRNA-Gly tRNA gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3346 VAA049_3347 VAA049_3347 VAA049_3347 3687123 3687199 - tRNA-Met tRNA gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3347 VAA049_3348 VAA049_3348 VAA049_3348 3687363 3687438 - tRNA-Gly tRNA gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3348 VAA049_3349 VAA049_3349 VAA049_3349 3687596 3687671 - tRNA-Gly tRNA gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3349 VAA049_335 VAA049_335 cpdB cpdB 347454 349415 - 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase cycNucDiestase: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_335 VAA049_3350 VAA049_3350 VAA049_3350 3687826 3687901 - tRNA-Gly tRNA gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3350 VAA049_3351 VAA049_3351 VAA049_3351 3688058 3688133 - tRNA-Gly tRNA gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3351 VAA049_3352 VAA049_3352 VAA049_3352 3688292 3688837 - exonuclease family protein [A] COG1949 Oligoribonuclease (3'->5' exoribonuclease) gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3352 VAA049_3353 VAA049_3353 rsgA rsgA 3688960 3690021 + ribosome small subunit-dependent GTPase A [R] COG1162 Predicted GTPases gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3353 VAA049_3354 VAA049_3354 psd psd 3690117 3690974 + phosphatidylserine decarboxylase PS_decarb: phosphatidylserine decarboxylase~[I] COG0688 Phosphatidylserine decarboxylase gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3354 VAA049_3355 VAA049_3355 VAA049_3355 3691183 3692598 + transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3355 VAA049_3356 VAA049_3356 VAA049_3356 3692750 3693637 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3356 VAA049_3357 VAA049_3357 gpmI gpmI 3693780 3695312 + phosphoglycerate mutase pgm_bpd_ind: phosphoglycerate mutase~[G] COG0696 Phosphoglyceromutase gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3357 VAA049_3358 VAA049_3358 VAA049_3358 3696626 3697585 - hypothetical protein conserved hypothetical protein gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3358 VAA049_3359 VAA049_3359 VAA049_3359 3695481 3696629 + peptidase M23 family protein [D] COG4942 Membrane-bound metallopeptidase gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3359 VAA049_336 VAA049_336 cobA cobA 349732 350598 + uroporphyrinogen-III C-methyltransferase cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase~[H] COG0007 Uroporphyrinogen-III methylase gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_336 VAA049_3360 VAA049_3360 VAA049_3360 3697672 3698286 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3360 VAA049_3361 VAA049_3361 hemE hemE 3698406 3699473 - uroporphyrinogen decarboxylase hemE: uroporphyrinogen decarboxylase~[H] COG0407 Uroporphyrinogen-III decarboxylase gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3361 VAA049_3362 VAA049_3362 VAA049_3362 3699726 3700502 - NADH pyrophosphatase zinc ribbon domain protein [L] COG2816 NTP pyrophosphohydrolases containing a Zn-finger%2C probably nucleic-acid-binding gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3362 VAA049_3363 VAA049_3363 VAA049_3363 3700686 3701174 + regulator of RNA polymerase sigma(70) subunit%2C Rsd/AlgQ family protein [K] COG3160 Regulator of sigma D gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3363 VAA049_3364 VAA049_3364 VAA049_3364 3701279 3705484 - DNA-directed RNA polymerase%2C beta'' subunit rpoC2_cyan: DNA-directed RNA polymerase%2C beta'' subunit~[K] COG0086 DNA-directed RNA polymerase%2C beta' subunit/160 kD subunit gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3364 VAA049_3365 VAA049_3365 rpoB rpoB 3705589 3709614 - DNA-directed RNA polymerase%2C beta subunit rpoB: DNA-directed RNA polymerase%2C beta subunit~[K] COG0085 DNA-directed RNA polymerase%2C beta subunit/140 kD subunit gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3365 VAA049_3366 VAA049_3366 rplL rplL 3709855 3710220 - ribosomal protein L7/L12 L12: ribosomal protein L7/L12~[J] COG0222 Ribosomal protein L7/L12 gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3366 VAA049_3367 VAA049_3367 VAA049_3367 3710287 3710775 - ribosomal L10 family protein [J] COG0244 Ribosomal protein L10 gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3367 VAA049_3368 VAA049_3368 rplA rplA 3711045 3711746 - ribosomal protein L1 rplA_bact: ribosomal protein L1~[J] COG0081 Ribosomal protein L1 gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3368 VAA049_3369 VAA049_3369 rplK rplK 3711751 3712179 - ribosomal protein L11 L11_bact: ribosomal protein L11~[J] COG0080 Ribosomal protein L11 gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3369 VAA049_337 VAA049_337 cysD cysD 350701 351609 + sulfate adenylyltransferase%2C small subunit cysD: sulfate adenylyltransferase%2C small subunit~[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_337 VAA049_3370 VAA049_3370 nusG nusG 3712310 3712858 - Transcription antiterminator nusG: transcription termination/antitermination factor NusG~[K] COG0250 Transcription antiterminator gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3370 VAA049_3371 VAA049_3371 secE secE 3712874 3713254 - preprotein translocase%2C SecE subunit secE_bact: preprotein translocase%2C SecE subunit~[U] COG0690 Preprotein translocase subunit SecE gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3371 VAA049_3372 VAA049_3372 tuf tuf 3713478 3714662 - translation elongation factor Tu EF-Tu: translation elongation factor Tu~[J] COG0050 GTPases - translation elongation factors gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3372 VAA049_3373 VAA049_3373 VAA049_3373 3714775 3714850 - tRNA-Thr tRNA gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3373 VAA049_3374 VAA049_3374 VAA049_3374 3714864 3714938 - tRNA-Gly tRNA gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3374 VAA049_3375 VAA049_3375 VAA049_3375 3714974 3715058 - tRNA-Tyr tRNA gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3375 VAA049_3376 VAA049_3376 VAA049_3376 3715094 3715169 - tRNA-Thr tRNA gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3376 VAA049_3377 VAA049_3377 coaA coaA 3715378 3716301 + pantothenate kinase panK_bact: pantothenate kinase~[H] COG1072 Panthothenate kinase gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3377 VAA049_3378 VAA049_3378 VAA049_3378 3716351 3717313 - biotin--[acetyl-CoA-carboxylase] ligase birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase~[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3378 VAA049_3379 VAA049_3379 murB murB 3717310 3718353 - UDP-N-acetylenolpyruvoylglucosamine reductase murB: UDP-N-acetylenolpyruvoylglucosamine reductase~[M] COG0812 UDP-N-acetylmuramate dehydrogenase gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3379 VAA049_338 VAA049_338 cysN cysN 351627 353057 + sulfate adenylyltransferase%2C large subunit cysN: sulfate adenylyltransferase%2C large subunit~[P] COG2895 GTPases - Sulfate adenylate transferase subunit 1 gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_338 VAA049_3380 VAA049_3380 VAA049_3380 3718420 3718842 + acetyltransferase family protein gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3380 VAA049_3381 VAA049_3381 VAA049_3381 3718937 3720277 + phospholipase D family protein [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3381 VAA049_3382 VAA049_3382 VAA049_3382 3720568 3720644 - tRNA-Asp tRNA gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3382 VAA049_3383 VAA049_3383 VAA049_3383 3720719 3720831 - 5S ribosomal RNA rRNA gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3383 VAA049_3384 VAA049_3384 VAA049_3384 3720965 3723847 - 23S ribosomal RNA rRNA gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3384 VAA049_3385 VAA049_3385 VAA049_3385 3724138 3724213 - tRNA-Ala tRNA gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3385 VAA049_3386 VAA049_3386 VAA049_3386 3724222 3724298 - tRNA-Ile tRNA gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3386 VAA049_3387 VAA049_3387 VAA049_3387 3724367 3725895 - 16S ribosomal RNA rRNA gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3387 VAA049_3388 VAA049_3388 fre fre 3726481 3727191 - NAD(P)H-flavin reductase [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3388 VAA049_3389 VAA049_3389 VAA049_3389 3727207 3727476 - 2Fe-2S iron-sulfur cluster binding domain protein [C] COG0633 Ferredoxin gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3389 VAA049_339 VAA049_339 cysC cysC 353068 353715 + adenylyl-sulfate kinase apsK: adenylyl-sulfate kinase~[P] COG0529 Adenylylsulfate kinase and related kinases gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_339 VAA049_3390 VAA049_3390 VAA049_3390 3727473 3729314 - decarboxylase%2C UbiD family protein [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3390 VAA049_3391 VAA049_3391 VAA049_3391 3729396 3730388 - hypothetical protein conserved hypothetical protein gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3391 VAA049_3392 VAA049_3392 rho rho 3730487 3731746 - transcription termination factor Rho rho: transcription termination factor Rho~[K] COG1158 Transcription termination factor gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3392 VAA049_3393 VAA049_3393 trxA trxA 3731945 3732271 - thioredoxin thioredoxin: thioredoxin~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3393 VAA049_3394 VAA049_3394 VAA049_3394 3732383 3733699 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3394 VAA049_3395 VAA049_3395 VAA049_3395 3733707 3735200 + ppx/GppA phosphatase family protein [FP] COG0248 Exopolyphosphatase gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3395 VAA049_3396 VAA049_3396 VAA049_3396 3735323 3738766 - sensory box protein [ER] COG0591 Na+/proline symporter gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3396 VAA049_3397 VAA049_3397 VAA049_3397 3738859 3740049 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3397 VAA049_3398 VAA049_3398 VAA049_3398 3740309 3742132 + CBS domain protein [T] COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3398 VAA049_3399 VAA049_3399 VAA049_3399 3742141 3742770 + exonuclease family protein [L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3399 VAA049_34 VAA049_34 def def 36945 37454 - peptide deformylase pept_deformyl: peptide deformylase~[J] COG0242 N-formylmethionyl-tRNA deformylase gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_34 VAA049_340 VAA049_340 VAA049_340 353787 354686 - hypothetical protein conserved hypothetical protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_340 VAA049_3400 VAA049_3400 acs acs 3742973 3744922 + acetate--CoA ligase ac_CoA_lig_AcsA: acetate--CoA ligase~[I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3400 VAA049_3401 VAA049_3401 aroQ aroQ 3745302 3745754 + 3-dehydroquinate dehydratase%2C type II aroQ: 3-dehydroquinate dehydratase%2C type II~[E] COG0757 3-dehydroquinate dehydratase II gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3401 VAA049_3402 VAA049_3402 accB accB 3745811 3746272 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein BCCP: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~[I] COG0511 Biotin carboxyl carrier protein gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3402 VAA049_3403 VAA049_3403 accC accC 3746287 3747630 + acetyl-CoA carboxylase%2C biotin carboxylase subunit accC: acetyl-CoA carboxylase%2C biotin carboxylase subunit~[I] COG0439 Biotin carboxylase gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3403 VAA049_3404 VAA049_3404 prmA prmA 3747839 3748726 + ribosomal protein L11 methyltransferase prmA: ribosomal protein L11 methyltransferase~[J] COG2264 Ribosomal protein L11 methylase gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3404 VAA049_3405 VAA049_3405 VAA049_3405 3748971 3749834 + TIM-barrel%2C nifR3 family protein nifR3_yhdG: TIM-barrel%2C nifR3 family protein~[J] COG0042 tRNA-dihydrouridine synthase gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3405 VAA049_3406 VAA049_3406 fis fis 3749858 3750154 + DNA-binding protein fis [KL] COG2901 Factor for inversion stimulation Fis%2C transcriptional activator gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3406 VAA049_3407 VAA049_3407 VAA049_3407 3750291 3751274 - fic/DOC family protein [S] COG3177 Uncharacterized conserved protein gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3407 VAA049_3408 VAA049_3408 VAA049_3408 3751511 3752509 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3408 VAA049_3409 VAA049_3409 edd edd 3752586 3754382 - phosphogluconate dehydratase edd: phosphogluconate dehydratase~[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3409 VAA049_341 VAA049_341 VAA049_341 354997 355518 - hypothetical protein conserved hypothetical protein~[S] COG3495 Uncharacterized protein conserved in bacteria gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_341 VAA049_3410 VAA049_3410 VAA049_3410 3754379 3754894 - carbohydrate kinase%2C thermoresistant glucokinase family protein therm_gnt_kin: carbohydrate kinase%2C thermoresistant glucokinase family protein~[G] COG3265 Gluconate kinase gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3410 VAA049_3411 VAA049_3411 VAA049_3411 3755048 3756424 + transporter%2C gluconate:H+ symporter family protein gntP: transporter%2C gluconate:H+ symporter family protein~[GE] COG2610 H+/gluconate symporter and related permeases gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3411 VAA049_3412 VAA049_3412 eda eda 3756437 3757042 + 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein~[G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3412 VAA049_3413 VAA049_3413 VAA049_3413 3757265 3759307 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3413 VAA049_3414 VAA049_3414 VAA049_3414 3759328 3760005 + pepSY-associated TM helix family protein [S] COG3295 Uncharacterized protein conserved in bacteria gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3414 VAA049_3415 VAA049_3415 VAA049_3415 3760270 3761910 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3415 VAA049_3416 VAA049_3416 VAA049_3416 3762032 3764167 - hypothetical protein orn/Lys/Arg decarboxylase%2C C-terminal domain protein~[E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3416 VAA049_3417 VAA049_3417 VAA049_3417 3764277 3765614 - amino acid permease family protein [E] COG0531 Amino acid transporters gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3417 VAA049_3418 VAA049_3418 VAA049_3418 3766440 3767999 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3418 VAA049_3419 VAA049_3419 zntR zntR 3768226 3768624 - Zn(II)-responsive transcriptional regulator zntR: Zn(II)-responsive transcriptional regulator~[K] COG0789 Predicted transcriptional regulators gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3419 VAA049_342 VAA049_342 VAA049_342 355571 356830 - ftsX-like permease family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_342 VAA049_3420 VAA049_3420 purH purH 3768913 3770505 + phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~[F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3420 VAA049_3421 VAA049_3421 purD purD 3770564 3771853 + phosphoribosylamine--glycine ligase purD: phosphoribosylamine--glycine ligase~[F] COG0151 Phosphoribosylamine-glycine ligase gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3421 VAA049_3422 VAA049_3422 VAA049_3422 3771934 3772623 - hypothetical protein conserved hypothetical protein gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3422 VAA049_3423 VAA049_3423 hupA hupA 3772669 3772941 - DNA-binding protein HU-alpha [L] COG0776 Bacterial nucleoid DNA-binding protein gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3423 VAA049_3424 VAA049_3424 VAA049_3424 3773313 3774371 + CBS domain protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3424 VAA049_3425 VAA049_3425 VAA049_3425 3774719 3775606 - glucokinase family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3425 VAA049_3426 VAA049_3426 manA manA 3775665 3776864 - mannose-6-phosphate isomerase%2C class I manA: mannose-6-phosphate isomerase%2C class I~[G] COG1482 Phosphomannose isomerase gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3426 VAA049_3427 VAA049_3427 VAA049_3427 3777226 3777813 - hypothetical protein conserved hypothetical protein~[S] COG3068 Uncharacterized protein conserved in bacteria gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3427 VAA049_3428 VAA049_3428 VAA049_3428 3777887 3778810 + D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3428 VAA049_3429 VAA049_3429 VAA049_3429 3778810 3779382 + uracil DNA glycosylase superfamily protein [L] COG1573 Uracil-DNA glycosylase gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3429 VAA049_343 VAA049_343 VAA049_343 356827 357543 - ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_343 VAA049_3430 VAA049_3430 VAA049_3430 3779437 3780675 + mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3430 VAA049_3431 VAA049_3431 VAA049_3431 3780871 3781191 - nucleotidyltransferase domain protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3431 VAA049_3432 VAA049_3432 VAA049_3432 3781181 3781591 - nucleotidyltransferase substrate binding%2C family protein nucleotidyltransferase substrate binding%2C HI0074 family protein~HI0074: nucleotidyltransferase substrate binding%2C HI0074 family protein gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3432 VAA049_3433 VAA049_3433 VAA049_3433 3781786 3783102 - RNA-metabolising metallo-beta-lactamase family protein [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3433 VAA049_3434 VAA049_3434 VAA049_3434 3783296 3783850 - bacterial sugar transferase family protein [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3434 VAA049_3435 VAA049_3435 VAA049_3435 3783858 3784829 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3435 VAA049_3436 VAA049_3436 VAA049_3436 3784982 3786847 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3436 VAA049_3437 VAA049_3437 VAA049_3437 3786855 3787961 + glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3437 VAA049_3438 VAA049_3438 VAA049_3438 3787964 3789154 - glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3438 VAA049_3439 VAA049_3439 VAA049_3439 3789144 3790028 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3439 VAA049_344 VAA049_344 VAA049_344 357625 358383 - hypothetical protein conserved hypothetical protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_344 VAA049_3440 VAA049_3440 gmd gmd 3790110 3791147 - GDP-mannose 4%2C6-dehydratase gmd: GDP-mannose 4%2C6-dehydratase~[M] COG1089 GDP-D-mannose dehydratase gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3440 VAA049_3441 VAA049_3441 VAA049_3441 3791150 3791515 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3441 VAA049_3442 VAA049_3442 VAA049_3442 3791519 3792439 - glycosyl transferase 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3442 VAA049_3443 VAA049_3443 VAA049_3443 3792436 3793410 - oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3443 VAA049_3444 VAA049_3444 VAA049_3444 3793401 3794168 - NDP-hexose 2%2C3-dehydratase family protein gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3444 VAA049_3445 VAA049_3445 VAA049_3445 3794172 3795305 - aminotransferase class I and II family protein [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3445 VAA049_3446 VAA049_3446 VAA049_3446 3795422 3796780 - AMP-binding enzyme family protein [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3446 VAA049_3447 VAA049_3447 VAA049_3447 3796777 3797478 - rmlD substrate binding domain protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3447 VAA049_3448 VAA049_3448 VAA049_3448 3797489 3797776 - hypothetical protein conserved hypothetical protein gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3448 VAA049_3449 VAA049_3449 VAA049_3449 3797787 3798530 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3449 VAA049_345 VAA049_345 VAA049_345 358432 358722 - hypothetical protein conserved hypothetical protein gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_345 VAA049_3450 VAA049_3450 VAA049_3450 3798540 3798758 - phosphopantetheine attachment site family protein [IQ] COG0236 Acyl carrier protein gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3450 VAA049_3451 VAA049_3451 VAA049_3451 3798772 3799836 - 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3451 VAA049_3452 VAA049_3452 VAA049_3452 3799845 3800387 - acetyltransferase domain protein gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3452 VAA049_3453 VAA049_3453 rfbA rfbA 3800390 3801256 - glucose-1-phosphate thymidylyltransferase rmlA: glucose-1-phosphate thymidylyltransferase~[M] COG1209 dTDP-glucose pyrophosphorylase gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3453 VAA049_3454 VAA049_3454 rfbB rfbB 3801253 3802317 - dTDP-glucose 4%2C6-dehydratase dTDP_gluc_dehyt: dTDP-glucose 4%2C6-dehydratase~[M] COG1088 dTDP-D-glucose 4%2C6-dehydratase gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3454 VAA049_3455 VAA049_3455 VAA049_3455 3802314 3804275 - putative membrane protein [M] COG1368 Phosphoglycerol transferase and related proteins%2C alkaline phosphatase superfamily gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3455 VAA049_3456 VAA049_3456 VAA049_3456 3804272 3806752 - glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3456 VAA049_3457 VAA049_3457 VAA049_3457 3806749 3806976 - hypothetical protein gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3457 VAA049_3458 VAA049_3458 VAA049_3458 3806969 3808207 - ABC transporter family protein [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system%2C ATPase component gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3458 VAA049_3459 VAA049_3459 VAA049_3459 3808204 3808998 - ABC-2 type transporter family protein [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems%2C permease component gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3459 VAA049_346 VAA049_346 VAA049_346 358955 359506 - hypothetical protein conserved hypothetical protein~[R] COG3054 Predicted transcriptional regulator gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_346 VAA049_3460 VAA049_3460 VAA049_3460 3809036 3810418 - phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3460 VAA049_3461 VAA049_3461 VAA049_3461 3810420 3811817 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~[M] COG0836 Mannose-1-phosphate guanylyltransferase gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3461 VAA049_3462 VAA049_3462 rfaD rfaD 3812260 3813204 + ADP-glyceromanno-heptose 6-epimerase heptose_epim: ADP-glyceromanno-heptose 6-epimerase~[MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3462 VAA049_3463 VAA049_3463 VAA049_3463 3813309 3815081 + polysaccharide deacetylase family protein [M] COG0438 Glycosyltransferase gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3463 VAA049_3464 VAA049_3464 VAA049_3464 3815095 3815655 + bacterial transferase hexapeptide family protein [R] COG0110 Acetyltransferase (isoleucine patch superfamily) gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3464 VAA049_3465 VAA049_3465 VAA049_3465 3815657 3816856 + O-Antigen ligase family protein [M] COG3307 Lipid A core - O-antigen ligase and related enzymes gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3465 VAA049_3466 VAA049_3466 waaF waaF 3816856 3817893 + lipopolysaccharide heptosyltransferase II heptsyl_trn_II: lipopolysaccharide heptosyltransferase II~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3466 VAA049_3467 VAA049_3467 VAA049_3467 3817890 3818939 + glycosyltransferase 9 family protein [M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3467 VAA049_3468 VAA049_3468 VAA049_3468 3818942 3819724 + glycosyltransferase sugar-binding region containing DXD motif family protein [M] COG3774 Mannosyltransferase OCH1 and related enzymes gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3468 VAA049_3469 VAA049_3469 VAA049_3469 3819724 3821004 + glycosyl transferases group 1 family protein [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3469 VAA049_347 VAA049_347 msrA msrA 359588 360226 - peptide-methionine (S)-S-oxide reductase msrA: peptide-methionine (S)-S-oxide reductase~[O] COG0225 Peptide methionine sulfoxide reductase gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_347 VAA049_3470 VAA049_3470 VAA049_3470 3821001 3821381 + capsule biosynthesis phosphatase family protein ecbF-BcbF: capsule biosynthesis phosphatase family protein gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3470 VAA049_3471 VAA049_3471 VAA049_3471 3821372 3822955 + putative aDP-L-glycero-D-mannoheptose-6-epimerase gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3471 VAA049_3472 VAA049_3472 VAA049_3472 3822952 3823695 + putative wcnJ gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3472 VAA049_3473 VAA049_3473 VAA049_3473 3823692 3824621 + wavE lipopolysaccharide synthesis family protein gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3473 VAA049_3474 VAA049_3474 VAA049_3474 3824625 3825584 - wavE lipopolysaccharide synthesis family protein gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3474 VAA049_3475 VAA049_3475 VAA049_3475 3825588 3826295 - kinase domain protein [RTKL] COG0515 Serine/threonine protein kinase gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3475 VAA049_3476 VAA049_3476 VAA049_3476 3826435 3827496 + glycosyltransferase 9 family protein [M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3476 VAA049_3477 VAA049_3477 VAA049_3477 3827539 3828318 + glycosyl transferase 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3477 VAA049_3478 VAA049_3478 VAA049_3478 3828380 3829417 - glycosyltransferase 9 family protein [M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3478 VAA049_3479 VAA049_3479 coaD coaD 3829528 3830022 + pantetheine-phosphate adenylyltransferase coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase~[H] COG0669 Phosphopantetheine adenylyltransferase gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3479 VAA049_348 VAA049_348 VAA049_348 360405 362120 + surface antigen variable number repeat family protein [M] COG0729 Outer membrane protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_348 VAA049_3480 VAA049_3480 mutM mutM 3830119 3830928 - DNA-formamidopyrimidine glycosylase fpg: DNA-formamidopyrimidine glycosylase~[L] COG0266 Formamidopyrimidine-DNA glycosylase gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3480 VAA049_3481 VAA049_3481 VAA049_3481 3830938 3831420 - hypothetical protein conserved hypothetical protein gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3481 VAA049_3482 VAA049_3482 rpmG rpmG 3831647 3831814 - ribosomal protein L33 rpmG_bact: ribosomal protein L33~[J] COG0267 Ribosomal protein L33 gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3482 VAA049_3483 VAA049_3483 rpmB rpmB 3831828 3832064 - ribosomal protein L28 L28: ribosomal protein L28~[J] COG0227 Ribosomal protein L28 gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3483 VAA049_3484 VAA049_3484 VAA049_3484 3832359 3833033 - DNA repair RadC family protein radc: DNA repair RadC family protein~[L] COG2003 DNA repair proteins gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3484 VAA049_3485 VAA049_3485 VAA049_3485 3833145 3834824 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3485 VAA049_3486 VAA049_3486 coaBC coaBC 3835007 3836206 + phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase~[H] COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3486 VAA049_3487 VAA049_3487 VAA049_3487 3836365 3836955 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3487 VAA049_3488 VAA049_3488 lpxL lpxL 3836961 3837908 + lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein~[M] COG1560 Lauroyl/myristoyl acyltransferase gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3488 VAA049_3489 VAA049_3489 msbB msbB 3837919 3838896 + lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase~[M] COG1560 Lauroyl/myristoyl acyltransferase gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3489 VAA049_349 VAA049_349 VAA049_349 362117 365881 + hypothetical protein conserved hypothetical protein~[S] COG2911 Uncharacterized protein conserved in bacteria gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_349 VAA049_3490 VAA049_3490 pyrE pyrE 3838982 3839623 - orotate phosphoribosyltransferase pyrE: orotate phosphoribosyltransferase~[F] COG0461 Orotate phosphoribosyltransferase gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3490 VAA049_3491 VAA049_3491 rph rph 3839989 3840705 - ribonuclease PH RNasePH: ribonuclease PH~[J] COG0689 RNase PH gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3491 VAA049_3492 VAA049_3492 VAA049_3492 3840869 3841735 + hypothetical protein conserved hypothetical protein~[S] COG1561 Uncharacterized stress-induced protein gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3492 VAA049_3493 VAA049_3493 VAA049_3493 3841801 3842289 + hypothetical protein conserved hypothetical protein~[S] COG2862 Predicted membrane protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3493 VAA049_3494 VAA049_3494 VAA049_3494 3842378 3843823 - phosphotransferase system%2C EIIB family protein [G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3494 VAA049_3495 VAA049_3495 murQ murQ 3843847 3844749 - N-acetylmuramic acid 6-phosphate etherase [R] COG2103 Predicted sugar phosphate isomerase gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3495 VAA049_3496 VAA049_3496 VAA049_3496 3844980 3845828 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3496 VAA049_3497 VAA049_3497 VAA049_3497 3845855 3847816 - fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3497 VAA049_3498 VAA049_3498 VAA049_3498 3847813 3848772 - periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3498 VAA049_3499 VAA049_3499 VAA049_3499 3848763 3849548 - ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3499 VAA049_35 VAA049_35 VAA049_35 37594 38721 + lysM domain protein [S] COG1652 Uncharacterized protein containing LysM domain gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_35 VAA049_350 VAA049_350 VAA049_350 365892 366239 + AIG2-like family protein [S] COG2105 Uncharacterized conserved protein gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_350 VAA049_3500 VAA049_3500 VAA049_3500 3849679 3851778 - TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3500 VAA049_3501 VAA049_3501 VAA049_3501 3851913 3853742 + ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3501 VAA049_3502 VAA049_3502 VAA049_3502 3853778 3854140 - hypothetical protein conserved hypothetical protein gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3502 VAA049_3503 VAA049_3503 VAA049_3503 3854312 3854611 - hypothetical protein conserved hypothetical protein gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3503 VAA049_3504 VAA049_3504 recQ recQ 3854604 3856439 - ATP-dependent DNA helicase RecQ recQ: ATP-dependent DNA helicase RecQ~[L] COG0514 Superfamily II DNA helicase gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3504 VAA049_3505 VAA049_3505 VAA049_3505 3856606 3857508 + eamA-like transporter family protein [R] COG2962 Predicted permeases gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3505 VAA049_3506 VAA049_3506 ggt ggt 3857682 3859436 + gamma-glutamyltransferase g_glut_trans: gamma-glutamyltransferase~[E] COG0405 Gamma-glutamyltransferase gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3506 VAA049_3507 VAA049_3507 VAA049_3507 3859593 3860396 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3507 VAA049_3508 VAA049_3508 VAA049_3508 3860471 3861139 + lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3508 VAA049_3509 VAA049_3509 uvrD uvrD 3861971 3864142 - DNA helicase II uvrD: DNA helicase II~[L] COG0210 Superfamily I DNA and RNA helicases gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3509 VAA049_351 VAA049_351 ppa ppa 366299 366829 - inorganic pyrophosphatase [C] COG0221 Inorganic pyrophosphatase gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_351 VAA049_3510 VAA049_3510 VAA049_3510 3864279 3866321 - peptidase M3 family protein [E] COG0339 Zn-dependent oligopeptidases gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3510 VAA049_3511 VAA049_3511 VAA049_3511 3866601 3867440 + ribosomal RNA small subunit methyltransferase D%2C RsmJ family protein [R] COG2961 Protein involved in catabolism of external DNA gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3511 VAA049_3512 VAA049_3512 gor gor 3867546 3868901 + glutathione-disulfide reductase gluta_reduc_1: glutathione-disulfide reductase~[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3512 VAA049_3513 VAA049_3513 VAA049_3513 3868996 3869943 - hypothetical protein conserved hypothetical protein gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3513 VAA049_3514 VAA049_3514 VAA049_3514 3870118 3871056 - binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3514 VAA049_3515 VAA049_3515 VAA049_3515 3871059 3872036 - binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3515 VAA049_3516 VAA049_3516 VAA049_3516 3872191 3873747 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3516 VAA049_3517 VAA049_3517 nikE nikE 3873839 3875554 - nickel import ATP-binding protein NikE nickel_nikE: nickel import ATP-binding protein NikE~[R] COG1123 ATPase components of various ABC-type transport systems%2C contain duplicated ATPase gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3517 VAA049_3518 VAA049_3518 VAA049_3518 3876290 3876366 - tRNA-Pro tRNA gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3518 VAA049_3519 VAA049_3519 VAA049_3519 3876428 3876503 - tRNA-His tRNA gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3519 VAA049_352 VAA049_352 VAA049_352 366999 368009 - fructose-1-6-bisphosphatase family protein [G] COG0158 Fructose-1%2C6-bisphosphatase gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_352 VAA049_3520 VAA049_3520 VAA049_3520 3876574 3876650 - tRNA-Pro tRNA gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3520 VAA049_3521 VAA049_3521 VAA049_3521 3876712 3876787 - tRNA-His tRNA gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3521 VAA049_3522 VAA049_3522 VAA049_3522 3876823 3876899 - tRNA-Arg tRNA gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3522 VAA049_3523 VAA049_3523 VAA049_3523 3877195 3877596 + cytochrome c family protein [C] COG3245 Cytochrome c5 gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3523 VAA049_3524 VAA049_3524 rep rep 3877664 3879679 - ATP-dependent DNA helicase Rep rep: ATP-dependent DNA helicase Rep~[L] COG0210 Superfamily I DNA and RNA helicases gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3524 VAA049_3525 VAA049_3525 VAA049_3525 3879840 3880421 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3525 VAA049_3526 VAA049_3526 VAA049_3526 3880461 3881546 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3526 VAA049_3527 VAA049_3527 VAA049_3527 3881558 3884668 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3527 VAA049_3528 VAA049_3528 VAA049_3528 3884784 3885035 + membrane fusogenic activity family protein [S] COG2960 Uncharacterized protein conserved in bacteria gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3528 VAA049_3529 VAA049_3529 ilvC ilvC 3885162 3886646 - ketol-acid reductoisomerase ilvC: ketol-acid reductoisomerase~[EH] COG0059 Ketol-acid reductoisomerase gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3529 VAA049_353 VAA049_353 mpl mpl 368315 369670 + L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase~mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase~[M] COG0773 UDP-N-acetylmuramate-alanine ligase gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_353 VAA049_3530 VAA049_3530 VAA049_3530 3886784 3887680 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3530 VAA049_3531 VAA049_3531 VAA049_3531 3887791 3887881 - tRNA-Ser tRNA gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3531 VAA049_3532 VAA049_3532 VAA049_3532 3887929 3888041 - 5S ribosomal RNA rRNA gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3532 VAA049_3533 VAA049_3533 VAA049_3533 3888175 3891057 - 23S ribosomal RNA rRNA gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3533 VAA049_3534 VAA049_3534 VAA049_3534 3891348 3891423 - tRNA-Ala tRNA gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3534 VAA049_3535 VAA049_3535 VAA049_3535 3891432 3891508 - tRNA-Ile tRNA gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3535 VAA049_3536 VAA049_3536 VAA049_3536 3891577 3893105 - 16S ribosomal RNA rRNA gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3536 VAA049_3537 VAA049_3537 VAA049_3537 3893472 3893584 - 5S ribosomal RNA rRNA gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3537 VAA049_3538 VAA049_3538 VAA049_3538 3893718 3896600 - 23S ribosomal RNA rRNA gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3538 VAA049_354 VAA049_354 VAA049_354 369683 370312 + polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein~[H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_354 VAA049_3540 VAA049_3540 VAA049_3540 3896946 3897021 - tRNA-Val tRNA gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3540 VAA049_3541 VAA049_3541 VAA049_3541 3897052 3897126 - tRNA-Lys tRNA gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3541 VAA049_3542 VAA049_3542 VAA049_3542 3897146 3897221 - tRNA-Glu tRNA gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3542 VAA049_3543 VAA049_3543 VAA049_3543 3897296 3898824 - 16S ribosomal RNA rRNA gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3543 VAA049_3544 VAA049_3544 VAA049_3544 3899298 3899822 - flavodoxin domain protein [CH] COG4635 Flavodoxin gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3544 VAA049_3545 VAA049_3545 VAA049_3545 3899845 3901302 - potassium uptake%2C TrkH family protein 2a38: potassium uptake%2C TrkH family protein~[P] COG0168 Trk-type K+ transport systems%2C membrane components gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3545 VAA049_3546 VAA049_3546 VAA049_3546 3901322 3901954 - hypothetical protein conserved hypothetical protein~[S] COG1739 Uncharacterized conserved protein gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3546 VAA049_3547 VAA049_3547 fadB fadB 3902165 3904336 + fatty oxidation complex%2C alpha subunit FadB fadB: fatty oxidation complex%2C alpha subunit FadB~[I] COG1250 3-hydroxyacyl-CoA dehydrogenase gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3547 VAA049_3548 VAA049_3548 fadA fadA 3904362 3905525 + acetyl-CoA C-acyltransferase FadA fadA: acetyl-CoA C-acyltransferase FadA~[I] COG0183 Acetyl-CoA acetyltransferase gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3548 VAA049_3549 VAA049_3549 VAA049_3549 3905592 3906497 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3549 VAA049_355 VAA049_355 thiB thiB 370574 371566 + thiamin/thiamine pyrophosphate ABC transporter%2C thiamin/thiamine pyrophospate-binding protein thiB: thiamin/thiamin pyrophosphate ABC transporter%2C thiamin/thiamin pyrophospate-binding protein~[H] COG4143 ABC-type thiamine transport system%2C periplasmic component gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_355 VAA049_3550 VAA049_3550 VAA049_3550 3906656 3907858 + drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3550 VAA049_3551 VAA049_3551 glmU glmU 3907914 3909278 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase~[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3551 VAA049_3552 VAA049_3552 atpC atpC 3909525 3909947 - ATP synthase F1%2C epsilon subunit ATP_synt_epsi: ATP synthase F1%2C epsilon subunit~[C] COG0355 F0F1-type ATP synthase%2C epsilon subunit (mitochondrial delta subunit) gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3552 VAA049_3553 VAA049_3553 atpD atpD 3909966 3911369 - ATP synthase F1%2C beta subunit atpD: ATP synthase F1%2C beta subunit~[C] COG0055 F0F1-type ATP synthase%2C beta subunit gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3553 VAA049_3554 VAA049_3554 atpG atpG 3911404 3912270 - ATP synthase F1%2C gamma subunit ATPsyn_F1gamma: ATP synthase F1%2C gamma subunit~[C] COG0224 F0F1-type ATP synthase%2C gamma subunit gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3554 VAA049_3555 VAA049_3555 atpA atpA 3912315 3913856 - ATP synthase F1%2C alpha subunit atpA: ATP synthase F1%2C alpha subunit~[C] COG0056 F0F1-type ATP synthase%2C alpha subunit gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3555 VAA049_3556 VAA049_3556 atpH atpH 3913870 3914403 - ATP synthase F1%2C delta subunit ATP_synt_delta: ATP synthase F1%2C delta subunit~[C] COG0712 F0F1-type ATP synthase%2C delta subunit (mitochondrial oligomycin sensitivity protein) gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3556 VAA049_3557 VAA049_3557 atpF atpF 3914418 3914882 - ATP synthase F0%2C B subunit ATP_synt_b: ATP synthase F0%2C B subunit~[C] COG0711 F0F1-type ATP synthase%2C subunit b gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3557 VAA049_3558 VAA049_3558 atpE atpE 3914962 3915219 - ATP synthase F0%2C C subunit ATP_synt_c: ATP synthase F0%2C C subunit~[C] COG0636 F0F1-type ATP synthase%2C subunit c/Archaeal/vacuolar-type H+-ATPase%2C subunit K gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3558 VAA049_3559 VAA049_3559 atpB atpB 3915263 3916075 - ATP synthase F0%2C A subunit ATP_synt_6_or_A: ATP synthase F0%2C A subunit~[C] COG0356 F0F1-type ATP synthase%2C subunit a gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3559 VAA049_356 VAA049_356 thiP thiP 371576 373168 + thiamine/thiamine pyrophosphate ABC transporter%2C permease protein thiP: thiamine/thiamine pyrophosphate ABC transporter%2C permease protein~[P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_356 VAA049_3560 VAA049_3560 VAA049_3560 3916084 3916473 - ATP synthase I chain family protein [C] COG3312 F0F1-type ATP synthase%2C subunit I gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3560 VAA049_3561 VAA049_3561 VAA049_3561 3916663 3917544 - ParB/RepB/Spo0J family partition domain protein parB_part: ParB/RepB/Spo0J family partition domain protein~[K] COG1475 Predicted transcriptional regulators gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3561 VAA049_3562 VAA049_3562 VAA049_3562 3917571 3918344 - hypothetical protein conserved hypothetical ATP binding family protein~[D] COG1192 ATPases involved in chromosome partitioning gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3562 VAA049_3563 VAA049_3563 rsmG rsmG 3918359 3918991 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG~[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3563 VAA049_3564 VAA049_3564 gidA gidA 3918991 3920886 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3564 VAA049_3565 VAA049_3565 VAA049_3565 3921360 3921794 - flavodoxin family protein [C] COG0716 Flavodoxins gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3565 VAA049_3566 VAA049_3566 trmE trmE 3921804 3923165 - tRNA modification GTPase TrmE mnmE_trmE_thdF: tRNA modification GTPase TrmE~[R] COG0486 Predicted GTPase gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3566 VAA049_3567 VAA049_3567 yidC yidC 3923259 3924884 - Preprotein translocase subunit YidC yidC_nterm: membrane protein insertase%2C YidC/Oxa1 family%2C N-terminal domain~[U] COG0706 Preprotein translocase subunit YidC gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3567 VAA049_3568 VAA049_3568 rnpA rnpA 3925111 3925434 - ribonuclease P protein component rnpA: ribonuclease P protein component~[J] COG0594 RNase P protein component gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3568 VAA049_3569 VAA049_3569 VAA049_3569 3925859 3926596 - ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3569 VAA049_357 VAA049_357 thiQ thiQ 373180 373896 + thiamine ABC transporter%2C ATP-binding protein thiQ: thiamine ABC transporter%2C ATP-binding protein~[H] COG3840 ABC-type thiamine transport system%2C ATPase component gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_357 VAA049_3570 VAA049_3570 VAA049_3570 3926593 3927264 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3570 VAA049_3571 VAA049_3571 VAA049_3571 3927337 3928083 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_3571 VAA049_358 VAA049_358 VAA049_358 373999 374568 - hypothetical protein conserved hypothetical protein~[S] COG3028 Uncharacterized protein conserved in bacteria gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_358 VAA049_359 VAA049_359 VAA049_359 374679 376022 + modulator of DNA gyrase family protein [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_359 VAA049_36 VAA049_36 dprA dprA 38721 39836 + DNA protecting protein DprA dprA: DNA protecting protein DprA~[LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_36 VAA049_360 VAA049_360 mgtE mgtE 376095 377456 - magnesium transporter mgtE: magnesium transporter~[P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_360 VAA049_361 VAA049_361 VAA049_361 377617 377895 - phosphocarrier%2C HPr family protein PTS_HPr_: phosphocarrier%2C HPr family protein~[G] COG1925 Phosphotransferase system%2C HPr-related proteins gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_361 VAA049_362 VAA049_362 VAA049_362 377904 378764 - P-loop ATPase family protein [R] COG1660 Predicted P-loop-containing kinase gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_362 VAA049_363 VAA049_363 ptsN ptsN 378777 379223 - PTS IIA-like nitrogen-regulatory protein PtsN nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN~[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_363 VAA049_364 VAA049_364 raiA raiA 379226 379513 - ribosomal subunit interface protein yfiA: ribosomal subunit interface protein~[J] COG1544 Ribosome-associated protein Y (PSrp-1) gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_364 VAA049_365 VAA049_365 rpoN rpoN 379538 381001 - RNA polymerase sigma-54 factor rpoN_sigma: RNA polymerase sigma-54 factor~[K] COG1508 DNA-directed RNA polymerase specialized sigma subunit%2C sigma54 homolog gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_365 VAA049_366 VAA049_366 lptB lptB 381057 381782 - LPS export ABC transporter ATP-binding protein LPS_export_lptB: LPS export ABC transporter ATP-binding protein~[R] COG1137 ABC-type (unclassified) transport system%2C ATPase component gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_366 VAA049_367 VAA049_367 lptA lptA 381785 382279 - lipopolysaccharide transport periplasmic protein LptA outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA~[S] COG1934 Uncharacterized protein conserved in bacteria gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_367 VAA049_368 VAA049_368 lptC lptC 382260 382823 - LPS export ABC transporter periplasmic protein LptC lptC_YrbK: LPS export ABC transporter periplasmic protein LptC~[S] COG3117 Uncharacterized protein conserved in bacteria gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_368 VAA049_369 VAA049_369 VAA049_369 382820 383377 - hypothetical protein conserved hypothetical protein~[R] COG1778 Low specificity phosphatase (HAD superfamily) gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_369 VAA049_37 VAA049_37 VAA049_37 39842 40315 + hypothetical protein conserved hypothetical protein~[S] COG2922 Uncharacterized protein conserved in bacteria gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_37 VAA049_370 VAA049_370 VAA049_370 383377 384351 - sugar isomerase%2C KpsF/GutQ family protein kpsF: sugar isomerase%2C KpsF/GutQ family protein~[M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_370 VAA049_371 VAA049_371 VAA049_371 384407 385369 - sodium/calcium exchanger family protein [P] COG0530 Ca2+/Na+ antiporter gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_371 VAA049_372 VAA049_372 VAA049_372 385961 386764 + ABC transporter family protein [Q] COG1127 ABC-type transport system involved in resistance to organic solvents%2C ATPase component gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_372 VAA049_373 VAA049_373 VAA049_373 386754 387545 + ABC transport permease subunit [Q] COG0767 ABC-type transport system involved in resistance to organic solvents%2C permease component gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_373 VAA049_374 VAA049_374 mlaD mlaD 387548 388039 + outer membrane lipid asymmetry maintenance protein MlaD OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD~[Q] COG1463 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_374 VAA049_375 VAA049_375 VAA049_375 388043 388681 + toluene tolerance%2C Ttg2 family protein [Q] COG2854 ABC-type transport system involved in resistance to organic solvents%2C auxiliary component gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_375 VAA049_376 VAA049_376 VAA049_376 388678 389007 + STAS domain protein [R] COG3113 Predicted NTP binding protein (contains STAS domain) gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_376 VAA049_377 VAA049_377 VAA049_377 389000 389254 + bolA-like family protein [K] COG5007 Predicted transcriptional regulator%2C BolA superfamily gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_377 VAA049_378 VAA049_378 murA murA 389262 390521 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_378 VAA049_379 VAA049_379 VAA049_379 390600 391328 + 1-acylglycerol-3-phosphate O-acyltransferases domain protein AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases domain protein~[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_379 VAA049_38 VAA049_38 VAA049_38 40331 40897 + NAD-dependent DNA ligase C4 zinc finger domain protein [L] COG0551 Zn-finger domain associated with topoisomerase type I gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_38 VAA049_380 VAA049_380 VAA049_380 391409 391798 - reactive intermediate/imine deaminase family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_380 VAA049_381 VAA049_381 pyrI pyrI 391903 392370 - aspartate carbamoyltransferase%2C regulatory subunit ATCase_reg: aspartate carbamoyltransferase%2C regulatory subunit~[F] COG1781 Aspartate carbamoyltransferase%2C regulatory subunit gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_381 VAA049_382 VAA049_382 pyrB pyrB 392382 393311 - aspartate carbamoyltransferase asp_carb_tr: aspartate carbamoyltransferase~[F] COG0540 Aspartate carbamoyltransferase%2C catalytic chain gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_382 VAA049_383 VAA049_383 argF argF 393561 394565 - ornithine carbamoyltransferase orni_carb_tr: ornithine carbamoyltransferase~[E] COG0078 Ornithine carbamoyltransferase gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_383 VAA049_384 VAA049_384 VAA049_384 394715 396091 - phoH-like family protein [T] COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_384 VAA049_385 VAA049_385 VAA049_385 396513 399422 + DEAD/DEAH box helicase family protein [KL] COG0553 Superfamily II DNA/RNA helicases%2C SNF2 family gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_385 VAA049_386 VAA049_386 VAA049_386 399519 400256 + RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_386 VAA049_387 VAA049_387 VAA049_387 400296 401273 + D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_387 VAA049_388 VAA049_388 valS valS 401360 404221 - valine--tRNA ligase valS: valine--tRNA ligase~[J] COG0525 Valyl-tRNA synthetase gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_388 VAA049_389 VAA049_389 VAA049_389 404315 404764 - DNA polymerase III chi subunit%2C HolC family protein [L] COG2927 DNA polymerase III%2C chi subunit gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_389 VAA049_39 VAA049_39 purK purK 40970 42103 - phosphoribosylaminoimidazole carboxylase%2C ATPase subunit purK: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_39 VAA049_390 VAA049_390 VAA049_390 404849 406360 - hypothetical protein cytosol aminopeptidase family%2C N-terminal domain protein~[E] COG0260 Leucyl aminopeptidase gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_390 VAA049_391 VAA049_391 lptF lptF 406554 407654 + LPS export ABC transporter permease LptF lptF_YjgP: LPS export ABC transporter permease LptF~[R] COG0795 Predicted permeases gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_391 VAA049_392 VAA049_392 lptG lptG 407658 408728 + LPS export ABC transporter permease LptG lptG_lptG: LPS export ABC transporter permease LptG~[R] COG0795 Predicted permeases gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_392 VAA049_393 VAA049_393 VAA049_393 408835 409311 - RDD family protein [S] COG1714 Predicted membrane protein/domain gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_393 VAA049_394 VAA049_394 VAA049_394 409499 409583 + tRNA-Leu tRNA gene392 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_394 VAA049_395 VAA049_395 VAA049_395 409742 410995 + HDIG domain protein HDIG: HDIG domain protein~[T] COG2206 HD-GYP domain gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_395 VAA049_396 VAA049_396 VAA049_396 411516 413046 + 16S ribosomal RNA rRNA gene394 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_396 VAA049_397 VAA049_397 VAA049_397 413114 413190 + tRNA-Ile tRNA gene395 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_397 VAA049_398 VAA049_398 VAA049_398 413199 413274 + tRNA-Ala tRNA gene396 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_398 VAA049_399 VAA049_399 VAA049_399 413564 416448 + 23S ribosomal RNA rRNA gene397 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_399 VAA049_4 VAA049_4 gyrB gyrB 3729 6146 + DNA gyrase%2C B subunit gyrB: DNA gyrase%2C B subunit~[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_4 VAA049_40 VAA049_40 purE purE 42107 42592 - phosphoribosylaminoimidazole carboxylase%2C catalytic subunit purE: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_40 VAA049_400 VAA049_400 VAA049_400 416580 416694 + 5S ribosomal RNA rRNA gene398 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_400 VAA049_402 VAA049_402 VAA049_402 416742 416817 + tRNA-Thr tRNA gene399 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_402 VAA049_403 VAA049_403 VAA049_403 416862 416976 + 5S ribosomal RNA rRNA gene400 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_403 VAA049_404 VAA049_404 VAA049_404 417034 417825 - hypothetical protein conserved hypothetical protein gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_404 VAA049_405 VAA049_405 leuD leuD 417926 418528 - 3-isopropylmalate dehydratase%2C small subunit leuD: 3-isopropylmalate dehydratase%2C small subunit~[E] COG0066 3-isopropylmalate dehydratase small subunit gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_405 VAA049_406 VAA049_406 leuC leuC 418544 419947 - 3-isopropylmalate dehydratase%2C large subunit leuC: 3-isopropylmalate dehydratase%2C large subunit~[E] COG0065 3-isopropylmalate dehydratase large subunit gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_406 VAA049_407 VAA049_407 leuB leuB 420005 421096 - 3-isopropylmalate dehydrogenase leuB: 3-isopropylmalate dehydrogenase~[CE] COG0473 Isocitrate/isopropylmalate dehydrogenase gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_407 VAA049_408 VAA049_408 leuA leuA 421208 422758 - 2-isopropylmalate synthase leuA_bact: 2-isopropylmalate synthase~[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_408 VAA049_409 VAA049_409 VAA049_409 423141 423776 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_409 VAA049_41 VAA049_41 VAA049_41 42759 43316 + tRNA threonylcarbamoyl adenosine modification protein%2C Sua5/YciO/YrdC/YwlC family [J] COG0009 Putative translation factor (SUA5) gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_41 VAA049_410 VAA049_410 VAA049_410 423906 424439 + PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_410 VAA049_411 VAA049_411 VAA049_411 424436 425524 + hypothetical protein MJ1255: conserved hypothetical domain protein~[GC] COG1819 Glycosyl transferases%2C related to UDP-glucuronosyltransferase gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_411 VAA049_412 VAA049_412 VAA049_412 425830 426789 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_412 VAA049_413 VAA049_413 VAA049_413 426965 428770 + AMP-binding enzyme family protein [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_413 VAA049_414 VAA049_414 ilvB ilvB 429261 430976 + acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_414 VAA049_415 VAA049_415 ilvN ilvN 430978 431472 + acetolactate synthase%2C small subunit acolac_sm: acetolactate synthase%2C small subunit~[E] COG0440 Acetolactate synthase%2C small (regulatory) subunit gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_415 VAA049_416 VAA049_416 VAA049_416 431706 432935 - ACT domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_416 VAA049_417 VAA049_417 rpiA rpiA 433189 433845 - ribose 5-phosphate isomerase A rpiA: ribose 5-phosphate isomerase A~[G] COG0120 Ribose 5-phosphate isomerase gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_417 VAA049_418 VAA049_418 VAA049_418 433955 434539 - 5-formyltetrahydrofolate cyclo-ligase MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase~[H] COG0212 5-formyltetrahydrofolate cyclo-ligase gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_418 VAA049_419 VAA049_419 zapA zapA 434739 435047 - cell division protein ZapA [S] COG3027 Uncharacterized protein conserved in bacteria gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_419 VAA049_42 VAA049_42 VAA049_42 43335 44252 + coproporphyrinogen III oxidase family protein [H] COG0408 Coproporphyrinogen III oxidase gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_42 VAA049_420 VAA049_420 VAA049_420 435289 435864 + yecA family protein ygfB_yecA: yecA family protein~[S] COG3079 Uncharacterized protein conserved in bacteria gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_420 VAA049_421 VAA049_421 ubiH ubiH 435885 437093 + 2-polyprenyl-6-methoxyphenol 4-hydroxylase ubiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_421 VAA049_422 VAA049_422 VAA049_422 437108 438334 + ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein ubi-OHases: ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_422 VAA049_423 VAA049_423 VAA049_423 438435 438641 - hypothetical protein conserved hypothetical protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_423 VAA049_424 VAA049_424 VAA049_424 439275 440246 - aminomethyltransferase folate-binding domain protein [R] COG0354 Predicted aminomethyltransferase related to GcvT gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_424 VAA049_425 VAA049_425 VAA049_425 440399 440659 + hypothetical protein conserved hypothetical protein~[S] COG2938 Uncharacterized conserved protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_425 VAA049_426 VAA049_426 VAA049_426 440709 441053 + hypothetical protein conserved hypothetical protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_426 VAA049_427 VAA049_427 nadB nadB 441078 442685 - L-aspartate oxidase nadB: L-aspartate oxidase~[H] COG0029 Aspartate oxidase gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_427 VAA049_428 VAA049_428 rpoE rpoE 443192 443764 + RNA polymerase sigma factor RpoE rpoE_Sigma70: RNA polymerase sigma factor RpoE~[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_428 VAA049_429 VAA049_429 VAA049_429 443796 444416 + hypothetical protein anti sigma-E RseA%2C N-terminal domain protein~[T] COG3073 Negative regulator of sigma E activity gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_429 VAA049_43 VAA049_43 aroE aroE 44314 45150 + shikimate dehydrogenase [E] COG0169 Shikimate 5-dehydrogenase gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_43 VAA049_430 VAA049_430 VAA049_430 444413 445378 + mucB/RseB family protein [T] COG3026 Negative regulator of sigma E activity gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_430 VAA049_431 VAA049_431 VAA049_431 445375 445845 + positive regulator of sigma(E)%2C RseC/MucC family protein [T] COG3086 Positive regulator of sigma E activity gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_431 VAA049_432 VAA049_432 lepA lepA 445958 447751 + elongation factor 4 lepA: elongation factor 4~[M] COG0481 Membrane GTPase LepA gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_432 VAA049_433 VAA049_433 lepB lepB 447843 448739 + signal peptidase I sigpep_I_bact: signal peptidase I~[U] COG0681 Signal peptidase I gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_433 VAA049_434 VAA049_434 rnc rnc 448783 449448 + ribonuclease III RNaseIII: ribonuclease III~[K] COG0571 dsRNA-specific ribonuclease gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_434 VAA049_435 VAA049_435 era era 449441 450415 + GTP-binding protein Era era: GTP-binding protein Era~[R] COG1159 GTPase gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_435 VAA049_436 VAA049_436 recO recO 450485 451210 + DNA repair protein RecO reco: DNA repair protein RecO~[L] COG1381 Recombinational DNA repair protein (RecF pathway) gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_436 VAA049_437 VAA049_437 pdxJ pdxJ 451207 451938 + pyridoxine 5'-phosphate synthase pdxJ: pyridoxine 5'-phosphate synthase~[H] COG0854 Pyridoxal phosphate biosynthesis protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_437 VAA049_438 VAA049_438 acpS acpS 451942 452322 + holo-[acyl-carrier-protein] synthase acpS: holo-[acyl-carrier-protein] synthase~[I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_438 VAA049_439 VAA049_439 VAA049_439 452579 453871 + hypothetical protein conserved hypothetical protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_439 VAA049_44 VAA049_44 VAA049_44 45403 45954 - hexapeptide repeat of succinyl-transferase family protein [R] COG0663 Carbonic anhydrases/acetyltransferases%2C isoleucine patch superfamily gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_44 VAA049_440 VAA049_440 VAA049_440 453881 454291 + hypothetical protein conserved hypothetical protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_440 VAA049_441 VAA049_441 VAA049_441 455564 458311 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_441 VAA049_442 VAA049_442 VAA049_442 454284 455576 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_442 VAA049_443 VAA049_443 rumA rumA 458516 459838 + 23S rRNA (uracil-5-)-methyltransferase RumA rumA: 23S rRNA (uracil-5-)-methyltransferase RumA~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_443 VAA049_444 VAA049_444 VAA049_444 459902 462118 + RelA/SpoT family protein spoT_relA: RelA/SpoT family protein~[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_444 VAA049_445 VAA049_445 VAA049_445 462218 463033 + MazG family protein mazG: MazG family protein~[R] COG1694 Predicted pyrophosphatase gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_445 VAA049_446 VAA049_446 pyrG pyrG 463308 464945 + CTP synthase pyrG: CTP synthase~[F] COG0504 CTP synthase (UTP-ammonia lyase) gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_446 VAA049_447 VAA049_447 eno eno 465024 466325 + phosphopyruvate hydratase eno: phosphopyruvate hydratase~[G] COG0148 Enolase gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_447 VAA049_448 VAA049_448 VAA049_448 466428 467639 - poly A polymerase head domain protein [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_448 VAA049_449 VAA049_449 VAA049_449 467732 469321 + ATPase associated with various cellular activities family protein [U] COG3267 Type II secretory pathway%2C component ExeA (predicted ATPase) gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_449 VAA049_45 VAA049_45 VAA049_45 45147 45422 + hypothetical protein conserved hypothetical protein gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_45 VAA049_450 VAA049_450 VAA049_450 469321 470091 + putative general secretion pathway protein B gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_450 VAA049_451 VAA049_451 VAA049_451 470165 470773 - bacterial SH3 domain protein [T] COG3103 SH3 domain protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_451 VAA049_452 VAA049_452 VAA049_452 470940 472202 - phosphate transporter family protein [P] COG0306 Phosphate/sulphate permeases gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_452 VAA049_453 VAA049_453 VAA049_453 472345 473025 - hypothetical protein conserved hypothetical protein~[P] COG1392 Phosphate transport regulator (distant homolog of PhoU) gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_453 VAA049_454 VAA049_454 VAA049_454 473231 474748 + CHAD domain protein [S] COG3025 Uncharacterized conserved protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_454 VAA049_455 VAA049_455 VAA049_455 475025 475156 - hypothetical protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_455 VAA049_456 VAA049_456 VAA049_456 475233 476489 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_456 VAA049_457 VAA049_457 VAA049_457 476613 479459 + glutamate-ammonia ligase adenylyltransferase family protein [OT] COG1391 Glutamine synthetase adenylyltransferase gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_457 VAA049_458 VAA049_458 rfaE1 rfaE1 479523 480953 + bifunctional protein RfaE%2C domain I rfaE_dom_I: bifunctional protein RfaE%2C domain I~[M] COG2870 ADP-heptose synthase%2C bifunctional sugar kinase/adenylyltransferase gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_458 VAA049_459 VAA049_459 VAA049_459 481071 482387 - type I secretion outer membrane%2C TolC family protein type_I_sec_TolC: type I secretion outer membrane%2C TolC family protein~[MU] COG1538 Outer membrane protein gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_459 VAA049_46 VAA049_46 VAA049_46 46469 47999 + 16S ribosomal RNA rRNA gene45 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_46 VAA049_460 VAA049_460 VAA049_460 482619 483245 + nudix-type nucleoside diphosphatase%2C YffH/AdpP family protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_460 VAA049_461 VAA049_461 VAA049_461 483252 483698 + hypothetical protein conserved hypothetical protein~[S] COG3151 Uncharacterized protein conserved in bacteria gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_461 VAA049_462 VAA049_462 VAA049_462 483723 484541 + calcineurin-like phosphoesterase family protein [R] COG1409 Predicted phosphohydrolases gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_462 VAA049_463 VAA049_463 VAA049_463 484543 485130 + alpha/beta hydrolase family protein [R] COG3150 Predicted esterase gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_463 VAA049_464 VAA049_464 parE parE 485459 487339 + DNA topoisomerase IV%2C B subunit parE_Gneg: DNA topoisomerase IV%2C B subunit~[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_464 VAA049_465 VAA049_465 parC parC 487343 489628 + DNA topoisomerase IV%2C A subunit parC_Gneg: DNA topoisomerase IV%2C A subunit~[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_465 VAA049_466 VAA049_466 VAA049_466 489677 489874 - hypothetical protein conserved hypothetical protein~[S] COG3024 Uncharacterized protein conserved in bacteria gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_466 VAA049_467 VAA049_467 VAA049_467 490016 490756 - hypothetical protein conserved hypothetical protein~[S] COG4582 Uncharacterized protein conserved in bacteria gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_467 VAA049_468 VAA049_468 coaE coaE 490788 491396 - dephospho-CoA kinase [H] COG0237 Dephospho-CoA kinase gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_468 VAA049_469 VAA049_469 VAA049_469 491393 492268 - type IV leader peptidase family protein [NOU] COG1989 Type II secretory pathway%2C prepilin signal peptidase PulO and related peptidases gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_469 VAA049_47 VAA049_47 VAA049_47 48067 48142 + tRNA-Ala tRNA gene46 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_47 VAA049_470 VAA049_470 VAA049_470 492326 493552 - type II secretion system (T2SS)%2C F family protein [NU] COG1459 Type II secretory pathway%2C component PulF gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_470 VAA049_471 VAA049_471 pilB pilB 493595 495283 - type IV-A pilus assembly ATPase PilB type_IV_pilB: type IV-A pilus assembly ATPase PilB~[NU] COG2804 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_471 VAA049_472 VAA049_472 VAA049_472 495292 495756 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG4969 Tfp pilus assembly protein%2C major pilin PilA gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_472 VAA049_473 VAA049_473 nadC nadC 496001 496891 - nicotinate-nucleotide diphosphorylase nadC: nicotinate-nucleotide diphosphorylase~[H] COG0157 Nicotinate-nucleotide pyrophosphorylase gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_473 VAA049_474 VAA049_474 VAA049_474 497189 497734 + N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_474 VAA049_475 VAA049_475 VAA049_475 497885 498403 - flavodoxin flav_long: flavodoxin~[C] COG0716 Flavodoxins gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_475 VAA049_476 VAA049_476 xerD xerD 498541 499449 + tyrosine recombinase XerD recomb_XerD: tyrosine recombinase XerD~[L] COG4974 Site-specific recombinase XerD gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_476 VAA049_477 VAA049_477 VAA049_477 499466 500218 + DSBA-like thioredoxin domain protein [O] COG1651 Protein-disulfide isomerase gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_477 VAA049_478 VAA049_478 recJ recJ 500277 502016 + single-stranded-DNA-specific exonuclease RecJ recJ: single-stranded-DNA-specific exonuclease RecJ~[L] COG0608 Single-stranded DNA-specific exonuclease gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_478 VAA049_479 VAA049_479 VAA049_479 502061 503965 - hypothetical protein 5'-nucleotidase%2C C-terminal domain protein~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_479 VAA049_48 VAA049_48 VAA049_48 48432 51316 + 23S ribosomal RNA rRNA gene47 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_48 VAA049_480 VAA049_480 VAA049_480 504449 505219 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_480 VAA049_481 VAA049_481 aceE aceE 505269 507929 + pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type aceE: pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type~[C] COG2609 Pyruvate dehydrogenase complex%2C dehydrogenase (E1) component gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_481 VAA049_482 VAA049_482 aceF aceF 507948 509834 + dihydrolipoyllysine-residue acetyltransferase PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase~[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase (E2) component%2C and related enzymes gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_482 VAA049_483 VAA049_483 lpdA lpdA 510102 511529 + dihydrolipoyl dehydrogenase lipoamide_DH: dihydrolipoyl dehydrogenase~[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_483 VAA049_484 VAA049_484 rsmH rsmH 512287 513237 + 16S rRNA (cytosine(1402)-N(4))-methyltransferase [M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_484 VAA049_485 VAA049_485 ftsL ftsL 513247 513567 + cell division protein FtsL ftsL_broad: cell division protein FtsL~[D] COG3116 Cell division protein gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_485 VAA049_486 VAA049_486 VAA049_486 513564 515306 + penicillin binding transpeptidase domain protein [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_486 VAA049_487 VAA049_487 murE murE 515323 516810 + UDP-N-acetylmuramyl-tripeptide synthetase family protein murE: UDP-N-acetylmuramyl-tripeptide synthetase family protein~[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_487 VAA049_488 VAA049_488 murF murF 516807 518168 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein~[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_488 VAA049_489 VAA049_489 mraY mraY 518165 519247 + phospho-N-acetylmuramoyl-pentapeptide-transferase mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase~[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_489 VAA049_49 VAA049_49 VAA049_49 51448 51562 + 5S ribosomal RNA rRNA gene48 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_49 VAA049_490 VAA049_490 murD murD 519271 520593 + UDP-N-acetylmuramoylalanine--D-glutamate ligase murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase~[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_490 VAA049_491 VAA049_491 ftsW ftsW 520649 521806 + cell division protein FtsW ftsW: cell division protein FtsW~[D] COG0772 Bacterial cell division membrane protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_491 VAA049_492 VAA049_492 murG murG 521793 522854 + undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~[M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_492 VAA049_493 VAA049_493 murC murC 522868 524328 + UDP-N-acetylmuramate--L-alanine ligase murC: UDP-N-acetylmuramate--L-alanine ligase~[M] COG0773 UDP-N-acetylmuramate-alanine ligase gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_493 VAA049_494 VAA049_494 VAA049_494 524510 525292 + cell division FtsQ family protein [M] COG1589 Cell division septal protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_494 VAA049_495 VAA049_495 ftsA ftsA 525285 526547 + cell division protein FtsA ftsA: cell division protein FtsA~[D] COG0849 Actin-like ATPase involved in cell division gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_495 VAA049_496 VAA049_496 ftsZ ftsZ 526578 527774 + cell division protein FtsZ ftsZ: cell division protein FtsZ~[D] COG0206 Cell division GTPase gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_496 VAA049_497 VAA049_497 lpxC lpxC 527872 528789 + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~[M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_497 VAA049_498 VAA049_498 VAA049_498 528895 529368 - hypothetical protein conserved hypothetical protein~[S] COG4701 Uncharacterized protein conserved in bacteria gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_498 VAA049_499 VAA049_499 secA secA 529722 532433 + preprotein translocase%2C SecA subunit secA: preprotein translocase%2C SecA subunit~[U] COG0653 Preprotein translocase subunit SecA (ATPase%2C RNA helicase) gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_499 VAA049_5 VAA049_5 VAA049_5 6566 6988 + hypothetical protein conserved hypothetical protein gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_5 VAA049_50 VAA049_50 VAA049_50 51587 51663 + tRNA-Asp tRNA gene49 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_50 VAA049_500 VAA049_500 VAA049_500 532583 532981 + mutator mutT family protein mutt: mutator mutT family protein~[LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_500 VAA049_501 VAA049_501 dapB dapB 533096 533905 + 4-hydroxy-tetrahydrodipicolinate reductase dapB: 4-hydroxy-tetrahydrodipicolinate reductase~[E] COG0289 Dihydrodipicolinate reductase gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_501 VAA049_502 VAA049_502 carA carA 534388 535527 + carbamoyl-phosphate synthase%2C small subunit CPSaseIIsmall: carbamoyl-phosphate synthase%2C small subunit~[EF] COG0505 Carbamoylphosphate synthase small subunit gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_502 VAA049_503 VAA049_503 carB carB 535544 538774 + carbamoyl-phosphate synthase%2C large subunit CPSaseII_lrg: carbamoyl-phosphate synthase%2C large subunit~[EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_503 VAA049_504 VAA049_504 VAA049_504 538864 539346 - hypothetical protein conserved hypothetical protein gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_504 VAA049_505 VAA049_505 VAA049_505 539727 540839 + AAA domain protein [R] COG3950 Predicted ATP-binding protein involved in virulence gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_505 VAA049_506 VAA049_506 VAA049_506 540832 541437 + HNH endonuclease family protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_506 VAA049_507 VAA049_507 VAA049_507 542517 543377 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_507 VAA049_508 VAA049_508 VAA049_508 541802 542587 + sulfite exporter TauE/SafE family protein [R] COG0730 Predicted permeases gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_508 VAA049_509 VAA049_509 VAA049_509 543529 544149 - hypothetical protein conserved hypothetical protein~[S] COG2860 Predicted membrane protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_509 VAA049_51 VAA049_51 VAA049_51 51693 51769 + tRNA-Trp tRNA gene50 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_51 VAA049_510 VAA049_510 VAA049_510 544232 545062 - periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_510 VAA049_511 VAA049_511 VAA049_511 545063 546016 - cobD/Cbib family protein [H] COG1270 Cobalamin biosynthesis protein CobD/CbiB gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_511 VAA049_512 VAA049_512 mtnN mtnN 546029 546724 - MTA/SAH nucleosidase MTA/SAH-Nsdase: MTA/SAH nucleosidase~[F] COG0775 Nucleoside phosphorylase gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_512 VAA049_513 VAA049_513 VAA049_513 546796 547161 - hypothetical protein conserved hypothetical protein~[S] COG4446 Uncharacterized protein conserved in bacteria gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_513 VAA049_514 VAA049_514 VAA049_514 547417 548829 - glutamate synthase%2C small subunit domain protein gltD_gamma_fam: glutamate synthase%2C small subunit domain protein~[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_514 VAA049_515 VAA049_515 VAA049_515 548848 553311 - glutamine amidotransferases class-II family protein [E] COG0069 Glutamate synthase domain 2 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_515 VAA049_516 VAA049_516 gltD gltD 553839 555308 - glutamate synthase%2C NADH/NADPH%2C small subunit domain protein GOGAT_sm_gam: glutamate synthase%2C NADH/NADPH%2C small subunit domain protein~[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_516 VAA049_517 VAA049_517 VAA049_517 555309 559853 - glutamine amidotransferases class-II family protein [E] COG0069 Glutamate synthase domain 2 gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_517 VAA049_518 VAA049_518 VAA049_518 560433 561371 + radical SAM superfamily protein [R] COG1242 Predicted Fe-S oxidoreductase gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_518 VAA049_519 VAA049_519 VAA049_519 561439 563178 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2202 FOG: PAS/PAC domain gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_519 VAA049_52 VAA049_52 VAA049_52 52002 52382 + crcB-like family protein [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_52 VAA049_520 VAA049_520 VAA049_520 563285 565642 + sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_520 VAA049_521 VAA049_521 VAA049_521 565700 566302 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_521 VAA049_522 VAA049_522 VAA049_522 566735 567124 + hypothetical protein conserved hypothetical protein gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_522 VAA049_523 VAA049_523 VAA049_523 567630 568055 - hypothetical protein conserved hypothetical protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_523 VAA049_524 VAA049_524 VAA049_524 567148 567633 + RraA family protein NOT-MenG: RraA family protein~[H] COG0684 Demethylmenaquinone methyltransferase gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_524 VAA049_525 VAA049_525 VAA049_525 568659 571118 + aspartate kinase domain protein asp_kinase: aspartate kinase domain protein~[E] COG0527 Aspartokinases gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_525 VAA049_526 VAA049_526 thrB thrB 571139 572095 + homoserine kinase thrB: homoserine kinase~[E] COG0083 Homoserine kinase gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_526 VAA049_527 VAA049_527 thrC thrC 572092 573372 + threonine synthase thrC: threonine synthase~[E] COG0498 Threonine synthase gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_527 VAA049_528 VAA049_528 grcA grcA 573452 573829 - autonomous glycyl radical cofactor GrcA spare_glycyl: autonomous glycyl radical cofactor GrcA~[R] COG3445 Acid-induced glycyl radical enzyme gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_528 VAA049_529 VAA049_529 VAA049_529 574175 575035 + apurinic endonuclease family protein nfo: apurinic endonuclease family protein~[L] COG0648 Endonuclease IV gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_529 VAA049_53 VAA049_53 thiC thiC 52634 54571 + phosphomethylpyrimidine synthase thiC: phosphomethylpyrimidine synthase~[H] COG0422 Thiamine biosynthesis protein ThiC gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_53 VAA049_530 VAA049_530 ung ung 575404 576084 + uracil-DNA glycosylase ung: uracil-DNA glycosylase~[L] COG0692 Uracil DNA glycosylase gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_530 VAA049_531 VAA049_531 VAA049_531 576174 576725 + hemerythrin HHE cation binding domain protein [S] COG3945 Uncharacterized conserved protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_531 VAA049_532 VAA049_532 VAA049_532 576869 577048 - hypothetical protein conserved hypothetical protein gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_532 VAA049_533 VAA049_533 agcS agcS 577741 579171 + amino acid carrier family protein agcS: amino acid carrier family protein~[E] COG1115 Na+/alanine symporter gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_533 VAA049_534 VAA049_534 VAA049_534 579335 580108 + hypothetical protein conserved hypothetical protein~[S] COG3022 Uncharacterized protein conserved in bacteria gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_534 VAA049_535 VAA049_535 VAA049_535 580138 580278 + hypothetical protein conserved hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_535 VAA049_536 VAA049_536 VAA049_536 580250 581074 + tatD related DNase family protein [L] COG0084 Mg-dependent DNase gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_536 VAA049_537 VAA049_537 VAA049_537 581261 582517 + nucleoside transporter%2C NupC family protein nupC: nucleoside transporter%2C NupC family protein~[F] COG1972 Nucleoside permease gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_537 VAA049_538 VAA049_538 deoC deoC 583119 583898 + deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_538 VAA049_539 VAA049_539 deoA deoA 583986 585332 + thymidine phosphorylase T_phosphoryl: thymidine phosphorylase~[F] COG0213 Thymidine phosphorylase gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_539 VAA049_54 VAA049_54 thiE thiE 54575 55888 + thiamine-phosphate diphosphorylase thiE: thiamine-phosphate diphosphorylase~[H] COG0352 Thiamine monophosphate synthase gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_54 VAA049_540 VAA049_540 deoB deoB 585350 586570 + phosphopentomutase deoB: phosphopentomutase~[G] COG1015 Phosphopentomutase gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_540 VAA049_541 VAA049_541 deoD deoD 586653 587378 + purine nucleoside phosphorylase deoD: purine nucleoside phosphorylase~[F] COG0813 Purine-nucleoside phosphorylase gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_541 VAA049_542 VAA049_542 VAA049_542 587460 588083 - bacterial virulence factor hemolysin family protein [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_542 VAA049_543 VAA049_543 serB serB 588186 589166 + phosphoserine phosphatase SerB serB: phosphoserine phosphatase SerB~[E] COG0560 Phosphoserine phosphatase gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_543 VAA049_544 VAA049_544 VAA049_544 589371 591710 - pilZ domain protein gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_544 VAA049_545 VAA049_545 radA radA 591844 593217 + DNA repair protein RadA sms: DNA repair protein RadA~[O] COG1066 Predicted ATP-dependent serine protease gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_545 VAA049_546 VAA049_546 fusA fusA 593488 595575 + translation elongation factor G EF-G: translation elongation factor G~[J] COG0480 Translation elongation factors (GTPases) gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_546 VAA049_547 VAA049_547 VAA049_547 595689 597374 - AMP-binding enzyme family protein [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_547 VAA049_548 VAA049_548 VAA049_548 597580 598734 - HD domain protein [T] COG2206 HD-GYP domain gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_548 VAA049_549 VAA049_549 chrA chrA 598870 600012 - chromate efflux transporter family protein 2A51: chromate efflux transporter family protein~[P] COG2059 Chromate transport protein ChrA gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_549 VAA049_55 VAA049_55 thiF thiF 55875 56651 + thiazole biosynthesis adenylyltransferase ThiF adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF~[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_55 VAA049_550 VAA049_550 VAA049_550 600395 603469 + glycosyl hydrolases 2 family protein [G] COG3250 Beta-galactosidase/beta-glucuronidase gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_550 VAA049_551 VAA049_551 VAA049_551 603481 604488 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_551 VAA049_552 VAA049_552 VAA049_552 604988 605539 - hypothetical protein conserved hypothetical protein gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_552 VAA049_553 VAA049_553 VAA049_553 604647 604991 + putative tRNA binding domain protein [R] COG0073 EMAP domain gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_553 VAA049_554 VAA049_554 VAA049_554 605559 606500 - putative membrane transport protein [P] COG0598 Mg2+ and Co2+ transporters gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_554 VAA049_555 VAA049_555 VAA049_555 606727 608178 - D-ala D-ala ligase family protein [HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_555 VAA049_556 VAA049_556 VAA049_556 608275 608433 + hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_556 VAA049_557 VAA049_557 VAA049_557 608382 609473 + acetyltransferase domain protein [R] COG0456 Acetyltransferases gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_557 VAA049_558 VAA049_558 VAA049_558 609636 610820 + nnrS family protein [P] COG3213 Uncharacterized protein involved in response to NO gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_558 VAA049_559 VAA049_559 dapD dapD 610902 611933 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase dapD_gpp: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase~[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_559 VAA049_56 VAA049_56 thiS thiS 56645 56851 + thiamine biosynthesis protein ThiS thiS: thiamine biosynthesis protein ThiS~[H] COG2104 Sulfur transfer protein involved in thiamine biosynthesis gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_56 VAA049_560 VAA049_560 VAA049_560 612354 612662 - yebG family protein [S] COG3141 Uncharacterized protein conserved in bacteria gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_560 VAA049_561 VAA049_561 VAA049_561 612777 613691 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_561 VAA049_562 VAA049_562 VAA049_562 613802 614770 + voltage-dependent anion channel family protein [P] COG1275 Tellurite resistance protein and related permeases gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_562 VAA049_563 VAA049_563 recC recC 614991 618437 + exodeoxyribonuclease V%2C gamma subunit recC: exodeoxyribonuclease V%2C gamma subunit~[L] COG1330 Exonuclease V gamma subunit gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_563 VAA049_564 VAA049_564 VAA049_564 618455 618592 + hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_564 VAA049_565 VAA049_565 recB recB 618749 622375 + exodeoxyribonuclease V%2C beta subunit recB: exodeoxyribonuclease V%2C beta subunit~[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_565 VAA049_566 VAA049_566 recD recD 622372 624492 + exodeoxyribonuclease V%2C alpha subunit recD: exodeoxyribonuclease V%2C alpha subunit~[L] COG0507 ATP-dependent exoDNAse (exonuclease V)%2C alpha subunit - helicase superfamily I member gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_566 VAA049_567 VAA049_567 VAA049_567 624522 624707 - putative exonuclease V subunit gamma gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_567 VAA049_568 VAA049_568 argA argA 624934 626271 - amino-acid N-acetyltransferase N-Ac-Glu-synth: amino-acid N-acetyltransferase~[E] COG0548 Acetylglutamate kinase gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_568 VAA049_569 VAA049_569 VAA049_569 626540 626944 + hypothetical protein conserved hypothetical protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_569 VAA049_57 VAA049_57 VAA049_57 56857 57627 + thiazole biosynthesis ThiG family protein [H] COG2022 Uncharacterized enzyme of thiazole biosynthesis gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_57 VAA049_570 VAA049_570 VAA049_570 627015 628121 + mltA specific insert domain protein [M] COG2821 Membrane-bound lytic murein transglycosylase gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_570 VAA049_571 VAA049_571 VAA049_571 628219 629034 + thiF family protein [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_571 VAA049_572 VAA049_572 csdE csdE 629042 629473 + cysteine desulfurase%2C sulfur acceptor subunit CsdE feS_syn_CsdE: cysteine desulfurase%2C sulfur acceptor subunit CsdE~[R] COG2166 SufE protein probably involved in Fe-S center assembly gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_572 VAA049_573 VAA049_573 csdA csdA 629543 630754 - cysteine desulfurase%2C catalytic subunit CsdA feS_syn_CsdA: cysteine desulfurase%2C catalytic subunit CsdA~[E] COG0520 Selenocysteine lyase gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_573 VAA049_574 VAA049_574 VAA049_574 630741 631346 - DJ-1 family protein not_thiJ: DJ-1 family protein~[R] COG0693 Putative intracellular protease/amidase gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_574 VAA049_575 VAA049_575 VAA049_575 631343 632233 - 2-dehydropantoate 2-reductase family protein apbA_panE: 2-dehydropantoate 2-reductase family protein~[H] COG1893 Ketopantoate reductase gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_575 VAA049_576 VAA049_576 VAA049_576 632373 633164 - nucleoside-specific channel-forming%2C Tsx family protein [M] COG3248 Nucleoside-binding outer membrane protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_576 VAA049_577 VAA049_577 VAA049_577 633492 634073 + ATP-dependent protease La domain protein [R] COG2802 Uncharacterized protein%2C similar to the N-terminal domain of Lon protease gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_577 VAA049_578 VAA049_578 VAA049_578 634164 634748 + RNA polymerase sigma factor%2C sigma-70 family protein sigma70-ECF: RNA polymerase sigma factor%2C sigma-70 family protein~[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_578 VAA049_579 VAA049_579 VAA049_579 634745 635425 + anti-sigma factor%2C ChrR family protein anti_sig_ChrR: anti-sigma factor%2C ChrR family protein~[T] COG3806 Anti-sigma factor gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_579 VAA049_58 VAA049_58 thiH thiH 57624 58736 + thiazole biosynthesis protein ThiH thiH: thiazole biosynthesis protein ThiH~[HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_58 VAA049_580 VAA049_580 VAA049_580 635513 636901 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_580 VAA049_581 VAA049_581 VAA049_581 636970 637500 - cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_581 VAA049_582 VAA049_582 VAA049_582 637511 638086 - hypothetical protein conserved hypothetical protein~[M] COG3056 Uncharacterized lipoprotein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_582 VAA049_583 VAA049_583 VAA049_583 638128 639258 - ribosomal L11 methyltransferase family protein [J] COG2813 16S RNA G1207 methylase RsmC gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_583 VAA049_584 VAA049_584 VAA049_584 639423 639743 + bolA-like family protein [T] COG0271 Stress-induced morphogen (activity unknown) gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_584 VAA049_585 VAA049_585 nqrA nqrA 640228 641568 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit~nqrA: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit~[C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrA gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_585 VAA049_586 VAA049_586 nqrB nqrB 641574 642821 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit~nqrB: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit~[C] COG1805 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrB gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_586 VAA049_587 VAA049_587 nqrC nqrC 642808 643581 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit~nqrC: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit~[C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrC gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_587 VAA049_588 VAA049_588 nqrD nqrD 643581 644213 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit~nqrD: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit~[C] COG1347 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrD gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_588 VAA049_589 VAA049_589 nqrE nqrE 644221 644817 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~nqrE: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~[C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrE gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_589 VAA049_59 VAA049_59 VAA049_59 58961 60754 - hypothetical protein creatinase/Prolidase N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_59 VAA049_590 VAA049_590 nqrF nqrF 644851 646077 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit~nqrF: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit~[C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrF gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_590 VAA049_591 VAA049_591 VAA049_591 646223 647227 + apbE family protein [H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_591 VAA049_592 VAA049_592 VAA049_592 647244 647477 + hypothetical protein conserved hypothetical protein~[S] COG2991 Uncharacterized protein conserved in bacteria gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_592 VAA049_593 VAA049_593 VAA049_593 647586 648668 + hypothetical protein impB/mucB/samB family C-terminal domain protein~[L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_593 VAA049_594 VAA049_594 VAA049_594 648941 649684 + hypothetical protein conserved hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_594 VAA049_595 VAA049_595 VAA049_595 649748 651265 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG3322 Predicted periplasmic ligand-binding sensor domain gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_595 VAA049_596 VAA049_596 VAA049_596 651422 652777 + neurotransmitter symporter family protein sodium:neurotransmitter symporter family protein~[R] COG0733 Na+-dependent transporters of the SNF family gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_596 VAA049_597 VAA049_597 VAA049_597 652846 653907 - succinylglutamate desuccinylase / Aspartoacylase family protein [R] COG3608 Predicted deacylase gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_597 VAA049_598 VAA049_598 VAA049_598 653894 654799 - alpha-L-glutamate ligase%2C RimK family protein rimK_fam: alpha-L-glutamate ligase%2C RimK family protein~[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_598 VAA049_599 VAA049_599 VAA049_599 654796 655239 - ATP-dependent zinc protease family protein [O] COG4067 Uncharacterized protein conserved in archaea gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_599 VAA049_6 VAA049_6 VAA049_6 6998 7114 + hypothetical protein conserved hypothetical protein gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_6 VAA049_60 VAA049_60 VAA049_60 60887 61828 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_60 VAA049_600 VAA049_600 VAA049_600 655473 656945 - aminoacyl-histidine dipeptidase [E] COG2195 Di- and tripeptidases gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_600 VAA049_601 VAA049_601 VAA049_601 657824 659116 + permease family protein [R] COG2252 Permeases gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_601 VAA049_602 VAA049_602 VAA049_602 659154 659618 + phosphoribosyl transferase domain protein [F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_602 VAA049_603 VAA049_603 VAA049_603 659715 660962 + alpha/beta hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_603 VAA049_604 VAA049_604 VAA049_604 661096 661485 + transcriptional regulator Crl family protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_604 VAA049_605 VAA049_605 proB proB 661606 662739 + glutamate 5-kinase proB: glutamate 5-kinase~[E] COG0263 Glutamate 5-kinase gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_605 VAA049_606 VAA049_606 proA proA 662751 664001 + glutamate-5-semialdehyde dehydrogenase proA: glutamate-5-semialdehyde dehydrogenase~[E] COG0014 Gamma-glutamyl phosphate reductase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_606 VAA049_607 VAA049_607 nrdR nrdR 664101 664550 + transcriptional regulator NrdR [K] COG1327 Predicted transcriptional regulator%2C consists of a Zn-ribbon and ATP-cone domains gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_607 VAA049_608 VAA049_608 ribD ribD 664576 665679 + riboflavin biosynthesis protein RibD eubact_ribD: riboflavin biosynthesis protein RibD~[H] COG1985 Pyrimidine reductase%2C riboflavin biosynthesis gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_608 VAA049_609 VAA049_609 ribE ribE 665684 666337 + riboflavin synthase%2C alpha subunit ribE: riboflavin synthase%2C alpha subunit~[H] COG0307 Riboflavin synthase alpha chain gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_609 VAA049_61 VAA049_61 VAA049_61 61945 63135 + drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_61 VAA049_610 VAA049_610 ribB ribB 666378 667487 + 3%2C4-dihydroxy-2-butanone-4-phosphate synthase ribB: 3%2C4-dihydroxy-2-butanone-4-phosphate synthase~[H] COG0108 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_610 VAA049_611 VAA049_611 ribH ribH 667752 668222 + 6%2C7-dimethyl-8-ribityllumazine synthase lumazine-synth: 6%2C7-dimethyl-8-ribityllumazine synthase~[H] COG0054 Riboflavin synthase beta-chain gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_611 VAA049_612 VAA049_612 nusB nusB 668222 668692 + transcription antitermination factor NusB nusB: transcription antitermination factor NusB~[K] COG0781 Transcription termination factor gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_612 VAA049_613 VAA049_613 thiL thiL 668783 669757 + thiamine-phosphate kinase thiL: thiamine-phosphate kinase~[H] COG0611 Thiamine monophosphate kinase gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_613 VAA049_614 VAA049_614 VAA049_614 669754 670263 + phosphatidylglycerophosphatase A family protein [I] COG1267 Phosphatidylglycerophosphatase A and related proteins gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_614 VAA049_615 VAA049_615 VAA049_615 670304 670687 - hypothetical protein conserved hypothetical protein gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_615 VAA049_616 VAA049_616 glnD glnD 670963 673593 - protein-P-II uridylyltransferase UTase_glnD: protein-P-II uridylyltransferase~[O] COG2844 UTP:GlnB (protein PII) uridylyltransferase gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_616 VAA049_617 VAA049_617 map map 673698 674540 - methionine aminopeptidase%2C type I met_pdase_I: methionine aminopeptidase%2C type I~[J] COG0024 Methionine aminopeptidase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_617 VAA049_618 VAA049_618 rpsB rpsB 674881 675609 + ribosomal protein S2 rpsB_bact: ribosomal protein S2~[J] COG0052 Ribosomal protein S2 gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_618 VAA049_619 VAA049_619 tsf tsf 675741 676583 + translation elongation factor Ts tsf: translation elongation factor Ts~[J] COG0264 Translation elongation factor Ts gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_619 VAA049_62 VAA049_62 VAA049_62 63239 63523 + hypothetical protein conserved hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_62 VAA049_620 VAA049_620 pyrH pyrH 676771 677502 + UMP kinase pyrH_bact: UMP kinase~[F] COG0528 Uridylate kinase gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_620 VAA049_621 VAA049_621 frr frr 677556 678113 + ribosome recycling factor frr: ribosome recycling factor~[J] COG0233 Ribosome recycling factor gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_621 VAA049_622 VAA049_622 uppS uppS 678205 678957 + di-trans%2Cpoly-cis-decaprenylcistransferase uppS: di-trans%2Cpoly-cis-decaprenylcistransferase~[I] COG0020 Undecaprenyl pyrophosphate synthase gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_622 VAA049_623 VAA049_623 VAA049_623 678975 679817 + cytidylyltransferase family protein [I] COG0575 CDP-diglyceride synthetase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_623 VAA049_624 VAA049_624 dxr dxr 679866 681074 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~[I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_624 VAA049_625 VAA049_625 rseP rseP 681071 682429 + RIP metalloprotease RseP [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1 gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_625 VAA049_626 VAA049_626 yaeT yaeT 682478 684889 + outer membrane assembly complex%2C YaeT protein OM_YaeT: outer membrane assembly complex%2C YaeT protein~[M] COG4775 Outer membrane protein/protective antigen OMA87 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_626 VAA049_627 VAA049_627 VAA049_627 684913 685413 + outer membrane family protein [M] COG2825 Outer membrane protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_627 VAA049_628 VAA049_628 lpxD lpxD 685423 686478 + UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD~[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_628 VAA049_629 VAA049_629 fabZ fabZ 686563 687015 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_629 VAA049_63 VAA049_63 VAA049_63 63612 64073 - asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_63 VAA049_630 VAA049_630 lpxA lpxA 687017 687805 + acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase~[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_630 VAA049_631 VAA049_631 lpxB lpxB 687966 689105 + lipid-A-disaccharide synthase lpxB: lipid-A-disaccharide synthase~[M] COG0763 Lipid A disaccharide synthetase gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_631 VAA049_632 VAA049_632 VAA049_632 689130 689750 + ribonuclease HII family protein [L] COG0164 Ribonuclease HII gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_632 VAA049_633 VAA049_633 dnaE dnaE 689789 693268 + DNA polymerase III%2C alpha subunit polc: DNA polymerase III%2C alpha subunit~[L] COG0587 DNA polymerase III%2C alpha subunit gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_633 VAA049_634 VAA049_634 accA accA 693323 694282 + acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit accA: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~[I] COG0825 Acetyl-CoA carboxylase alpha subunit gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_634 VAA049_635 VAA049_635 tilS tilS 694422 695744 + tRNA(Ile)-lysidine synthetase lysidine_TilS_N: tRNA(Ile)-lysidine synthetase~[D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_635 VAA049_636 VAA049_636 VAA049_636 695780 696103 + cytochrome c family protein [C] COG2863 Cytochrome c553 gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_636 VAA049_637 VAA049_637 VAA049_637 696480 697004 + ferulic acid decarboxylase [Q] COG3479 Phenolic acid decarboxylase gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_637 VAA049_638 VAA049_638 glnB glnB 697164 697502 + nitrogen regulatory protein P-II [E] COG0347 Nitrogen regulatory protein PII gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_638 VAA049_639 VAA049_639 VAA049_639 697570 698415 + endonuclease/Exonuclease/phosphatase family protein [S] COG3021 Uncharacterized protein conserved in bacteria gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_639 VAA049_64 VAA049_64 VAA049_64 64299 66455 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_64 VAA049_640 VAA049_640 VAA049_640 698432 700030 - mltD lipid attachment motif family protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_640 VAA049_641 VAA049_641 gloB gloB 700102 700860 - hydroxyacylglutathione hydrolase GSH_gloB: hydroxyacylglutathione hydrolase~[R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_641 VAA049_642 VAA049_642 VAA049_642 700898 701629 + methyltransferase domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_642 VAA049_643 VAA049_643 VAA049_643 701706 702176 - RNase H family protein [L] COG0328 Ribonuclease HI gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_643 VAA049_644 VAA049_644 dnaQ dnaQ 702233 702976 + DNA polymerase III%2C epsilon subunit dnaQ_proteo: DNA polymerase III%2C epsilon subunit~[L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_644 VAA049_645 VAA049_645 VAA049_645 702985 704244 + hypothetical protein conserved hypothetical protein gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_645 VAA049_646 VAA049_646 VAA049_646 704391 706835 - hypothetical protein acyl-CoA dehydrogenase%2C N-terminal domain protein~[I] COG1960 Acyl-CoA dehydrogenases gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_646 VAA049_647 VAA049_647 gmhA gmhA 707153 707728 + phosphoheptose isomerase gmhA: phosphoheptose isomerase~[G] COG0279 Phosphoheptose isomerase gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_647 VAA049_648 VAA049_648 VAA049_648 707791 708636 + glutamine amidotransferases class-II family protein [R] COG0121 Predicted glutamine amidotransferase gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_648 VAA049_649 VAA049_649 purN purN 708777 709415 - phosphoribosylglycinamide formyltransferase purN: phosphoribosylglycinamide formyltransferase~[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_649 VAA049_65 VAA049_65 VAA049_65 66515 67300 + methyltransferase domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_65 VAA049_650 VAA049_650 purM purM 709418 710458 - phosphoribosylformylglycinamidine cyclo-ligase [F] COG0150 Phosphoribosylaminoimidazole (AIR) synthetase gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_650 VAA049_651 VAA049_651 upp upp 710625 711251 + uracil phosphoribosyltransferase upp: uracil phosphoribosyltransferase~[F] COG0035 Uracil phosphoribosyltransferase gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_651 VAA049_652 VAA049_652 VAA049_652 711592 713013 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_652 VAA049_653 VAA049_653 VAA049_653 713111 714097 - pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_653 VAA049_654 VAA049_654 VAA049_654 714163 714741 - smr domain protein [S] COG2840 Uncharacterized protein conserved in bacteria gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_654 VAA049_655 VAA049_655 VAA049_655 714923 715063 - hypothetical protein conserved hypothetical protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_655 VAA049_657 VAA049_657 VAA049_657 715293 715369 + tRNA-Pro tRNA gene653 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_657 VAA049_658 VAA049_658 VAA049_658 715544 716410 - traB family protein [S] COG3735 Uncharacterized protein conserved in bacteria gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_658 VAA049_659 VAA049_659 chb chb 716857 719508 + N%2CN'-diacetylchitobiase [G] COG3525 N-acetyl-beta-hexosaminidase gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_659 VAA049_66 VAA049_66 VAA049_66 67424 67807 + hypothetical protein conserved hypothetical protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_66 VAA049_660 VAA049_660 VAA049_660 719635 720075 - hypothetical protein conserved hypothetical protein~[R] COG3019 Predicted metal-binding protein gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_660 VAA049_661 VAA049_661 VAA049_661 720084 722804 - copper-translocating P-type ATPase ATPase-IB1_Cu: copper-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_661 VAA049_662 VAA049_662 gltX gltX 723005 724429 + glutamate--tRNA ligase gltX_bact: glutamate--tRNA ligase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_662 VAA049_663 VAA049_663 VAA049_663 724725 725690 + ompA-like transmembrane domain protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_663 VAA049_664 VAA049_664 VAA049_664 725779 726285 - hypothetical protein conserved hypothetical protein gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_664 VAA049_665 VAA049_665 VAA049_665 726897 728960 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_665 VAA049_666 VAA049_666 VAA049_666 729264 730079 + siderophore-interacting FAD-binding domain protein [P] COG2375 Siderophore-interacting protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_666 VAA049_667 VAA049_667 VAA049_667 730337 737596 + amino acid adenylation domain protein AA-adenyl-dom: amino acid adenylation domain protein~[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_667 VAA049_668 VAA049_668 VAA049_668 737726 738859 - putative flagella basal-body protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_668 VAA049_669 VAA049_669 VAA049_669 739020 739655 + hypothetical protein conserved hypothetical protein~[S] COG5616 Predicted integral membrane protein gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_669 VAA049_67 VAA049_67 yedA yedA 67903 68790 - carboxylate/amino acid/amine transporter family protein 2A78: carboxylate/amino acid/amine transporter family protein~[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_67 VAA049_670 VAA049_670 VAA049_670 739666 740100 + LPP20 lipofamily protein [S] COG3018 Uncharacterized protein conserved in bacteria gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_670 VAA049_671 VAA049_671 VAA049_671 740210 740635 - flgN family protein [NUO] COG3418 Flagellar biosynthesis/type III secretory pathway chaperone gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_671 VAA049_672 VAA049_672 flgM flgM 740739 741062 - flagellar biosynthesis anti-sigma factor FlgM flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM~[KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_672 VAA049_673 VAA049_673 flgA flgA 741193 741936 - flagella basal body P-ring formation protein FlgA flgA_cterm: flagella basal body P-ring formation protein FlgA~[NO] COG1261 Flagellar basal body P-ring biosynthesis protein gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_673 VAA049_674 VAA049_674 VAA049_674 742017 742943 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_674 VAA049_675 VAA049_675 VAA049_675 742954 743781 + methyltransferase domain protein [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_675 VAA049_676 VAA049_676 flgB flgB 744000 744395 + flagellar basal-body rod protein FlgB flgB: flagellar basal-body rod protein FlgB~[N] COG1815 Flagellar basal body protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_676 VAA049_677 VAA049_677 flgC flgC 744400 744816 + flagellar basal-body rod protein FlgC flgC: flagellar basal-body rod protein FlgC~[N] COG1558 Flagellar basal body rod protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_677 VAA049_678 VAA049_678 VAA049_678 744834 745541 + hypothetical protein flagellar hook capping - N-terminal region family protein~[N] COG1843 Flagellar hook capping protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_678 VAA049_679 VAA049_679 VAA049_679 745570 746874 + flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG1749 Flagellar hook protein FlgE gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_679 VAA049_68 VAA049_68 VAA049_68 68847 69272 - universal stress family protein [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_68 VAA049_680 VAA049_680 flgF flgF 747057 747806 + flagellar basal-body rod protein FlgF flgF: flagellar basal-body rod protein FlgF~[N] COG4787 Flagellar basal body rod protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_680 VAA049_681 VAA049_681 flgG flgG 747826 748614 + flagellar basal-body rod protein FlgG flgG_G_neg: flagellar basal-body rod protein FlgG~[N] COG4786 Flagellar basal body rod protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_681 VAA049_682 VAA049_682 VAA049_682 748638 749414 + flagellar L-ring family protein [N] COG2063 Flagellar basal body L-ring protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_682 VAA049_683 VAA049_683 VAA049_683 749505 750590 + flagellar P-ring family protein [N] COG1706 Flagellar basal-body P-ring protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_683 VAA049_684 VAA049_684 flgJ flgJ 750601 751539 + flagellar rod assembly protein/muramidase FlgJ flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ~[MNO] COG3951 Rod binding protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_684 VAA049_685 VAA049_685 flgK flgK 751718 753592 + flagellar hook-associated protein FlgK flgK_ends: flagellar hook-associated protein FlgK~[N] COG1256 Flagellar hook-associated protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_685 VAA049_686 VAA049_686 flgL flgL 753605 754798 + flagellar hook-associated protein 3 flagell_flgL: flagellar hook-associated protein 3~[N] COG1344 Flagellin and related hook-associated proteins gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_686 VAA049_687 VAA049_687 VAA049_687 755206 756345 + hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_687 VAA049_688 VAA049_688 flaC flaC 756900 758033 + flagellin C [N] COG1344 Flagellin and related hook-associated proteins gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_688 VAA049_689 VAA049_689 VAA049_689 758321 758405 - tRNA-Leu tRNA gene685 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_689 VAA049_69 VAA049_69 VAA049_69 69437 69964 + ferritin-like domain protein [P] COG1528 Ferritin-like protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_69 VAA049_690 VAA049_690 VAA049_690 758447 758521 - tRNA-Gln tRNA gene686 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_690 VAA049_692 VAA049_692 VAA049_692 758560 758644 - tRNA-Leu tRNA gene687 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_692 VAA049_693 VAA049_693 VAA049_693 758688 758762 - tRNA-Gln tRNA gene688 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_693 VAA049_694 VAA049_694 VAA049_694 758780 758865 - tRNA-Leu tRNA gene689 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_694 VAA049_695 VAA049_695 VAA049_695 758888 758964 - tRNA-Met tRNA gene690 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_695 VAA049_696 VAA049_696 VAA049_696 758990 759074 - tRNA-Leu tRNA gene691 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_696 VAA049_697 VAA049_697 VAA049_697 759116 759190 - tRNA-Gln tRNA gene692 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_697 VAA049_698 VAA049_698 VAA049_698 759217 759301 - tRNA-Leu tRNA gene693 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_698 VAA049_7 VAA049_7 VAA049_7 7390 7827 + hsp20/alpha crystallin family protein [O] COG0071 Molecular chaperone (small heat shock protein) gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_7 VAA049_70 VAA049_70 VAA049_70 70040 70363 + universal stress B family protein gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_70 VAA049_700 VAA049_700 VAA049_700 759343 759417 - tRNA-Gln tRNA gene694 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_700 VAA049_701 VAA049_701 VAA049_701 759435 759520 - tRNA-Leu tRNA gene695 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_701 VAA049_702 VAA049_702 VAA049_702 759544 759620 - tRNA-Met tRNA gene696 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_702 VAA049_703 VAA049_703 VAA049_703 759698 759772 - tRNA-Gln tRNA gene697 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_703 VAA049_704 VAA049_704 VAA049_704 759800 759884 - tRNA-Leu tRNA gene698 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_704 VAA049_705 VAA049_705 VAA049_705 759909 759994 - tRNA-Leu tRNA gene699 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_705 VAA049_706 VAA049_706 VAA049_706 760023 760099 - tRNA-Met tRNA gene700 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_706 VAA049_707 VAA049_707 VAA049_707 760377 761468 - 50S ribosome-binding GTPase family protein [J] COG0012 Predicted GTPase%2C probable translation factor gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_707 VAA049_708 VAA049_708 pth pth 761479 762069 - aminoacyl-tRNA hydrolase pth: aminoacyl-tRNA hydrolase~[J] COG0193 Peptidyl-tRNA hydrolase gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_708 VAA049_709 VAA049_709 prs prs 762239 763183 - ribose-phosphate diphosphokinase family protein ribP_PPkin: ribose-phosphate diphosphokinase family protein~[FE] COG0462 Phosphoribosylpyrophosphate synthetase gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_709 VAA049_71 VAA049_71 VAA049_71 71689 72600 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_71 VAA049_710 VAA049_710 ispE ispE 763214 764086 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase~[I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_710 VAA049_711 VAA049_711 lolB lolB 764083 764700 - outer membrane lipoprotein LolB lolB: outer membrane lipoprotein LolB~[M] COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_711 VAA049_712 VAA049_712 hemA hemA 764859 766118 + glutamyl-tRNA reductase hemA: glutamyl-tRNA reductase~[H] COG0373 Glutamyl-tRNA reductase gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_712 VAA049_713 VAA049_713 prfA prfA 766148 767236 + peptide chain release factor 1 prfA: peptide chain release factor 1~[J] COG0216 Protein chain release factor A gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_713 VAA049_714 VAA049_714 prmC prmC 767240 768100 + protein-(glutamine-N5) methyltransferase%2C release factor-specific RF_mod_PrmC: protein-(glutamine-N5) methyltransferase%2C release factor-specific~[J] COG2890 Methylase of polypeptide chain release factors gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_714 VAA049_715 VAA049_715 VAA049_715 768100 768483 + invasion expression up-regulator%2C SirB family protein [S] COG3094 Uncharacterized protein conserved in bacteria gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_715 VAA049_716 VAA049_716 VAA049_716 768499 769311 + tetratricopeptide repeat family protein [S] COG2912 Uncharacterized conserved protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_716 VAA049_717 VAA049_717 kdsA kdsA 769331 770182 + 3-deoxy-8-phosphooctulonate synthase KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase~[M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_717 VAA049_718 VAA049_718 VAA049_718 770724 772385 + hypothetical protein 5'-nucleotidase%2C C-terminal domain protein~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_718 VAA049_719 VAA049_719 VAA049_719 772518 773000 + aminoacyl-tRNA editing domain protein [S] COG2606 Uncharacterized conserved protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_719 VAA049_72 VAA049_72 VAA049_72 70505 71692 + flavo%2C family protein flavo%2C HI0933 family protein~[R] COG2081 Predicted flavoproteins gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_72 VAA049_720 VAA049_720 VAA049_720 773071 774324 - uracil-xanthine permease family protein ncs2: uracil-xanthine permease family protein~[F] COG2233 Xanthine/uracil permeases gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_720 VAA049_721 VAA049_721 VAA049_721 774545 775693 + hypothetical protein conserved hypothetical protein~[S] COG3249 Uncharacterized protein conserved in bacteria gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_721 VAA049_722 VAA049_722 VAA049_722 775858 776274 - hypothetical protein conserved hypothetical protein~[S] COG3308 Predicted membrane protein gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_722 VAA049_723 VAA049_723 wrbA wrbA 776298 776858 - quinone oxidoreductase%2C type IV NAD(P)H:quinone oxidoreductase%2C type IV~flav_wrbA: NAD(P)H:quinone oxidoreductase%2C type IV~[R] COG0655 Multimeric flavodoxin WrbA gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_723 VAA049_724 VAA049_724 arsC arsC 776855 777205 - arsenate reductase arsC: arsenate reductase~[P] COG1393 Arsenate reductase and related proteins%2C glutaredoxin family gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_724 VAA049_725 VAA049_725 VAA049_725 777228 778682 - tetratricopeptide repeat family protein [R] COG4783 Putative Zn-dependent protease%2C contains TPR repeats gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_725 VAA049_726 VAA049_726 VAA049_726 778866 779102 + sulfurtransferase TusA family protein [O] COG0425 Predicted redox protein%2C regulator of disulfide bond formation gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_726 VAA049_727 VAA049_727 VAA049_727 779095 780159 + hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_727 VAA049_728 VAA049_728 VAA049_728 780350 782221 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_728 VAA049_729 VAA049_729 VAA049_729 782323 782790 - redoxin family protein [O] COG1225 Peroxiredoxin gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_729 VAA049_73 VAA049_73 VAA049_73 72723 74255 + rmuC family protein [S] COG1322 Uncharacterized protein conserved in bacteria gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_73 VAA049_730 VAA049_730 VAA049_730 782805 783347 - glycine cleavage system transcriptional repressor%2C putative [E] COG2716 Glycine cleavage system regulatory protein gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_730 VAA049_731 VAA049_731 dapA dapA 783625 784503 + 4-hydroxy-tetrahydrodipicolinate synthase dapA: 4-hydroxy-tetrahydrodipicolinate synthase~[EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_731 VAA049_732 VAA049_732 VAA049_732 784561 785580 + nlpB/DapX lipofamily protein [M] COG3317 Uncharacterized lipoprotein gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_732 VAA049_733 VAA049_733 VAA049_733 785673 785885 - hypothetical protein conserved hypothetical protein gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_733 VAA049_734 VAA049_734 VAA049_734 785887 786561 - D-alanyl-D-alanine carboxypeptidase family protein [M] COG1876 D-alanyl-D-alanine carboxypeptidase gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_734 VAA049_735 VAA049_735 dapE dapE 786564 787697 - succinyl-diaminopimelate desuccinylase dapE_proteo: succinyl-diaminopimelate desuccinylase~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_735 VAA049_736 VAA049_736 VAA049_736 787728 788075 - transcriptional regulator%2C Spx/MgsR family protein arsC_related: transcriptional regulator%2C Spx/MgsR family protein~[P] COG1393 Arsenate reductase and related proteins%2C glutaredoxin family gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_736 VAA049_737 VAA049_737 VAA049_737 788326 788613 + winged helix-turn helix family protein [S] COG4519 Uncharacterized protein conserved in bacteria gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_737 VAA049_738 VAA049_738 VAA049_738 788680 789036 - hypothetical protein conserved hypothetical protein gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_738 VAA049_739 VAA049_739 VAA049_739 789276 789644 + hypothetical protein conserved hypothetical protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_739 VAA049_74 VAA049_74 VAA049_74 74300 75082 + ubiquinone/menaquinone biosynthesis methyltransferase family protein menG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase family protein~[H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_74 VAA049_740 VAA049_740 VAA049_740 789710 790618 + Dyp-type peroxidase family protein dyp_perox_fam: Dyp-type peroxidase family protein~[P] COG2837 Predicted iron-dependent peroxidase gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_740 VAA049_741 VAA049_741 VAA049_741 790742 791878 + hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_741 VAA049_742 VAA049_742 flaD flaD 792167 793300 + flagellin D [N] COG1344 Flagellin and related hook-associated proteins gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_742 VAA049_743 VAA049_743 flaB flaB 793535 794665 + flagellin B [N] COG1344 Flagellin and related hook-associated proteins gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_743 VAA049_744 VAA049_744 VAA049_744 794739 795200 + flaG family protein [N] COG1334 Uncharacterized flagellar protein FlaG gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_744 VAA049_745 VAA049_745 VAA049_745 795222 797222 + flagellar hook-associated family protein [N] COG1345 Flagellar capping protein gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_745 VAA049_746 VAA049_746 VAA049_746 797224 797529 + flagellar FliT family protein gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_746 VAA049_747 VAA049_747 fliS fliS 797540 797950 + flagellar protein FliS fliS: flagellar protein FliS~[NUO] COG1516 Flagellin-specific chaperone FliS gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_747 VAA049_748 VAA049_748 VAA049_748 798182 799648 + AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_748 VAA049_749 VAA049_749 VAA049_749 799775 800815 + sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_749 VAA049_75 VAA049_75 VAA049_75 75109 75714 + SCP-2 sterol transfer family protein [S] COG3165 Uncharacterized protein conserved in bacteria gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_75 VAA049_750 VAA049_750 VAA049_750 800818 802251 + bacterial regulatory%2C Fis family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_750 VAA049_751 VAA049_751 fliE fliE 802327 802638 + flagellar hook-basal body complex protein FliE fliE: flagellar hook-basal body complex protein FliE~[NU] COG1677 Flagellar hook-basal body protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_751 VAA049_752 VAA049_752 fliF fliF 802654 804396 + flagellar M-ring protein FliF fliF: flagellar M-ring protein FliF~[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_752 VAA049_753 VAA049_753 fliG fliG 804389 805435 + flagellar motor switch protein FliG fliG: flagellar motor switch protein FliG~[N] COG1536 Flagellar motor switch protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_753 VAA049_754 VAA049_754 VAA049_754 805528 806328 + hypothetical protein essential Yae1%2C N terminal family protein~[NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_754 VAA049_755 VAA049_755 fliI fliI 806332 807651 + flagellar protein export ATPase FliI fliI_clade1: flagellar protein export ATPase FliI~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_755 VAA049_756 VAA049_756 fliJ fliJ 807666 808109 + flagellar export protein FliJ flagell_FliJ: flagellar export protein FliJ~[NUO] COG2882 Flagellar biosynthesis chaperone gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_756 VAA049_757 VAA049_757 VAA049_757 808288 810297 + flagellar hook-length control FliK family protein [N] COG3144 Flagellar hook-length control protein gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_757 VAA049_758 VAA049_758 VAA049_758 810332 810835 + flagellar basal body-associated FliL family protein [N] COG1580 Flagellar basal body-associated protein gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_758 VAA049_759 VAA049_759 fliM fliM 810843 811892 + flagellar motor switch protein FliM fliM_switch: flagellar motor switch protein FliM~[N] COG1868 Flagellar motor switch protein gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_759 VAA049_76 VAA049_76 ubiB ubiB 75711 77345 + 2-polyprenylphenol 6-hydroxylase ubiB: 2-polyprenylphenol 6-hydroxylase~[R] COG0661 Predicted unusual protein kinase gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_76 VAA049_760 VAA049_760 fliN fliN 811963 812373 + flagellar motor switch protein FliN fliN: flagellar motor switch protein FliN~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_760 VAA049_761 VAA049_761 fliO fliO 812377 812766 + flagellar biosynthetic protein FliO fliO_TIGR: flagellar biosynthetic protein FliO~[N] COG3190 Flagellar biogenesis protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_761 VAA049_762 VAA049_762 fliP fliP 812744 813643 + flagellar biosynthetic protein FliP fliP: flagellar biosynthetic protein FliP~[NU] COG1338 Flagellar biosynthesis pathway%2C component FliP gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_762 VAA049_763 VAA049_763 fliQ fliQ 813656 813925 + flagellar biosynthetic protein FliQ fliQ: flagellar biosynthetic protein FliQ~[NU] COG1987 Flagellar biosynthesis pathway%2C component FliQ gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_763 VAA049_764 VAA049_764 fliR fliR 813934 814716 + flagellar biosynthetic protein FliR fliR: flagellar biosynthetic protein FliR~[NU] COG1684 Flagellar biosynthesis pathway%2C component FliR gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_764 VAA049_765 VAA049_765 flhB flhB 814726 815856 + flagellar biosynthetic protein FlhB flhB: flagellar biosynthetic protein FlhB~[NU] COG1377 Flagellar biosynthesis pathway%2C component FlhB gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_765 VAA049_766 VAA049_766 VAA049_766 815999 816559 - smr domain protein [S] COG2840 Uncharacterized protein conserved in bacteria gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_766 VAA049_767 VAA049_767 prmB prmB 816626 817558 + (glutamine-N5) methyltransferase%2C ribosomal protein L3-specific L3_gln_methyl: -(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific~[J] COG2890 Methylase of polypeptide chain release factors gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_767 VAA049_768 VAA049_768 aroC aroC 817788 818873 + chorismate synthase aroC: chorismate synthase~[E] COG0082 Chorismate synthase gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_768 VAA049_769 VAA049_769 VAA049_769 818955 819578 - hypothetical protein conserved hypothetical protein~[S] COG2860 Predicted membrane protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_769 VAA049_77 VAA049_77 tatA tatA 77405 77653 + twin arginine-targeting translocase%2C TatA/E family protein tatAE: twin arginine-targeting translocase%2C TatA/E family protein~[U] COG1826 Sec-independent protein secretion pathway components gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_77 VAA049_770 VAA049_770 VAA049_770 819947 820477 + hypothetical protein conserved hypothetical protein~[S] COG3101 Uncharacterized protein conserved in bacteria gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_770 VAA049_771 VAA049_771 VAA049_771 820516 820779 + yfcL family protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_771 VAA049_772 VAA049_772 VAA049_772 820987 821514 + NADPH-dependent FMN reductase family protein [R] COG0431 Predicted flavoprotein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_772 VAA049_773 VAA049_773 mnmC mnmC 821593 823608 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC mnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC%2C C-terminal domain~[S] COG4121 Uncharacterized conserved protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_773 VAA049_774 VAA049_774 VAA049_774 823735 824946 + hypothetical protein thiolase%2C N-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_774 VAA049_775 VAA049_775 VAA049_775 825150 826295 + D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_775 VAA049_776 VAA049_776 asd asd 826279 827292 + aspartate-semialdehyde dehydrogenase asd_B: aspartate-semialdehyde dehydrogenase~[E] COG0136 Aspartate-semialdehyde dehydrogenase gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_776 VAA049_777 VAA049_777 fur fur 827374 827826 - ferric uptake regulation protein [P] COG0735 Fe2+/Zn2+ uptake regulation proteins gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_777 VAA049_778 VAA049_778 VAA049_778 828192 828692 + hypothetical protein conserved hypothetical protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_778 VAA049_779 VAA049_779 VAA049_779 828696 829574 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_779 VAA049_78 VAA049_78 tatB tatB 77657 78058 + twin arginine-targeting protein translocase TatB tatB: twin arginine-targeting protein translocase TatB~[U] COG1826 Sec-independent protein secretion pathway components gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_78 VAA049_780 VAA049_780 VAA049_780 829690 830130 + lrgA family protein [R] COG1380 Putative effector of murein hydrolase LrgA gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_780 VAA049_781 VAA049_781 VAA049_781 830136 830825 + lrgB-like family protein [M] COG1346 Putative effector of murein hydrolase gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_781 VAA049_782 VAA049_782 VAA049_782 830899 831426 - flavodoxin flav_long: flavodoxin~[C] COG0716 Flavodoxins gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_782 VAA049_783 VAA049_783 VAA049_783 831475 831696 - hypothetical protein conserved hypothetical protein gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_783 VAA049_784 VAA049_784 VAA049_784 831792 832565 - PGAP1-like family protein [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_784 VAA049_785 VAA049_785 VAA049_785 832658 833191 + seqA family protein [L] COG3057 Negative regulator of replication initiationR gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_785 VAA049_786 VAA049_786 pgm pgm 833300 834946 + phosphoglucomutase%2C alpha-D-glucose phosphate-specific pgm: phosphoglucomutase%2C alpha-D-glucose phosphate-specific~[G] COG0033 Phosphoglucomutase gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_786 VAA049_787 VAA049_787 VAA049_787 834995 835744 - hypothetical protein conserved hypothetical protein~[S] COG3782 Uncharacterized protein conserved in bacteria gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_787 VAA049_788 VAA049_788 VAA049_788 835834 836592 + NIF3 family protein [S] COG0327 Uncharacterized conserved protein gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_788 VAA049_789 VAA049_789 gltA gltA 836644 837933 - citrate (Si)-synthase cit_synth_I: citrate (Si)-synthase~[C] COG0372 Citrate synthase gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_789 VAA049_79 VAA049_79 tatC tatC 78147 78899 + twin arginine-targeting protein translocase TatC tatC: twin arginine-targeting protein translocase TatC~[U] COG0805 Sec-independent protein secretion pathway component TatC gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_79 VAA049_790 VAA049_790 sdhC sdhC 838329 838721 + succinate dehydrogenase%2C cytochrome b556 subunit succ_dehyd_cytB: succinate dehydrogenase%2C cytochrome b556 subunit~[C] COG2009 Succinate dehydrogenase/fumarate reductase%2C cytochrome b subunit gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_790 VAA049_791 VAA049_791 sdhD sdhD 838715 839059 + succinate dehydrogenase%2C hydrophobic membrane anchor protein succ_dehyd_anc: succinate dehydrogenase%2C hydrophobic membrane anchor protein~[C] COG2142 Succinate dehydrogenase%2C hydrophobic anchor subunit gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_791 VAA049_792 VAA049_792 sdhA sdhA 839117 840826 + succinate dehydrogenase%2C flavoprotein subunit sdhA_forward: succinate dehydrogenase%2C flavoprotein subunit~[C] COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_792 VAA049_793 VAA049_793 VAA049_793 840841 841551 + succinate dehydrogenase and fumarate reductase iron-sulfur family protein dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein~[C] COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_793 VAA049_794 VAA049_794 sucA sucA 841640 844450 + oxoglutarate dehydrogenase (succinyl-transferring)%2C E1 component 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring)%2C E1 component~[C] COG0567 2-oxoglutarate dehydrogenase complex%2C dehydrogenase (E1) component%2C and related enzymes gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_794 VAA049_795 VAA049_795 sucB sucB 844479 845693 + dihydrolipoyllysine-residue succinyltransferase%2C E2 component of oxoglutarate dehydrogenase complex sucB: dihydrolipoyllysine-residue succinyltransferase%2C E2 component of oxoglutarate dehydrogenase complex~[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase (E2) component%2C and related enzymes gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_795 VAA049_796 VAA049_796 sucC sucC 845861 847027 + succinate-CoA ligase%2C beta subunit sucCoAbeta: succinate-CoA ligase%2C beta subunit~[C] COG0045 Succinyl-CoA synthetase%2C beta subunit gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_796 VAA049_797 VAA049_797 sucD sucD 847027 847899 + succinate-CoA ligase%2C alpha subunit sucCoAalpha: succinate-CoA ligase%2C alpha subunit~[C] COG0074 Succinyl-CoA synthetase%2C alpha subunit gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_797 VAA049_798 VAA049_798 VAA049_798 848006 848788 - ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_798 VAA049_799 VAA049_799 VAA049_799 848781 849569 - ABC transporter family protein [P] COG1121 ABC-type Mn/Zn transport systems%2C ATPase component gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_799 VAA049_8 VAA049_8 VAA049_8 7915 9171 - aminotransferase class I and II family protein [E] COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_8 VAA049_80 VAA049_80 VAA049_80 79211 80212 + cytochrome c family protein [P] COG1858 Cytochrome c peroxidase gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_80 VAA049_800 VAA049_800 VAA049_800 849653 850537 + periplasmic solute binding family protein [P] COG4531 ABC-type Zn2+ transport system%2C periplasmic component/surface adhesin gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_800 VAA049_801 VAA049_801 VAA049_801 850740 854084 + helix-turn-helix domain protein [T] COG3292 Predicted periplasmic ligand-binding sensor domain gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_801 VAA049_802 VAA049_802 VAA049_802 854856 855086 + feoA domain protein [P] COG1918 Fe2+ transport system protein A gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_802 VAA049_803 VAA049_803 feoB feoB 855083 857359 + ferrous iron transport protein B feoB: ferrous iron transport protein B~[P] COG0370 Fe2+ transport system protein B gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_803 VAA049_804 VAA049_804 VAA049_804 857356 857586 + feoC like transcriptional regulator family protein gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_804 VAA049_805 VAA049_805 VAA049_805 857848 858276 - HIT domain protein [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_805 VAA049_806 VAA049_806 argS argS 858382 860115 - arginine--tRNA ligase argS: arginine--tRNA ligase~[J] COG0018 Arginyl-tRNA synthetase gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_806 VAA049_807 VAA049_807 VAA049_807 860908 863679 - insulinase family protein [O] COG1025 Secreted/periplasmic Zn-dependent peptidases%2C insulinase-like gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_807 VAA049_808 VAA049_808 VAA049_808 860315 860911 + yecM family protein [S] COG3102 Uncharacterized protein conserved in bacteria gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_808 VAA049_809 VAA049_809 sixA sixA 863877 864344 + phosphohistidine phosphatase SixA sixA: phosphohistidine phosphatase SixA~[T] COG2062 Phosphohistidine phosphatase SixA gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_809 VAA049_81 VAA049_81 VAA049_81 80318 81673 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_81 VAA049_810 VAA049_810 flhA flhA 864676 866769 + flagellar biosynthesis protein FlhA flhA: flagellar biosynthesis protein FlhA~[NU] COG1298 Flagellar biosynthesis pathway%2C component FlhA gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_810 VAA049_811 VAA049_811 flhF flhF 866804 868291 + flagellar biosynthesis protein FlhF flhF: flagellar biosynthesis protein FlhF~[N] COG1419 Flagellar GTP-binding protein gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_811 VAA049_812 VAA049_812 VAA049_812 868305 869192 + 4Fe-4S iron sulfur cluster binding s%2C NifH/frxC family protein [D] COG0455 ATPases involved in chromosome partitioning gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_812 VAA049_813 VAA049_813 VAA049_813 869185 869919 + RNA polymerase sigma factor%2C FliA/WhiG family protein fliA_WhiG: RNA polymerase sigma factor%2C FliA/WhiG family protein~[K] COG1191 DNA-directed RNA polymerase specialized sigma subunit gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_813 VAA049_814 VAA049_814 VAA049_814 869953 870333 + response regulator [T] COG0784 FOG: CheY-like receiver gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_814 VAA049_815 VAA049_815 VAA049_815 870389 871108 + chemotaxis phosphatase%2C CheZ family protein [NT] COG3143 Chemotaxis protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_815 VAA049_816 VAA049_816 VAA049_816 871118 873499 + cheW-like domain protein [NT] COG0643 Chemotaxis protein histidine kinase and related kinases gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_816 VAA049_817 VAA049_817 VAA049_817 873526 874659 + cheB methylesterase family protein [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_817 VAA049_818 VAA049_818 VAA049_818 874669 875445 + 4Fe-4S iron sulfur cluster binding s%2C NifH/frxC family protein [D] COG1192 ATPases involved in chromosome partitioning gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_818 VAA049_819 VAA049_819 VAA049_819 875438 876454 + cheW-like domain protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_819 VAA049_82 VAA049_82 VAA049_82 81753 82565 - leucine carboxyl methyltransferase family protein [Q] COG3315 O-Methyltransferase involved in polyketide biosynthesis gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_82 VAA049_820 VAA049_820 VAA049_820 876493 876987 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_820 VAA049_821 VAA049_821 VAA049_821 876987 877466 + hypothetical protein conserved hypothetical protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_821 VAA049_822 VAA049_822 ccmA ccmA 877839 878462 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[O] COG4133 ABC-type transport system involved in cytochrome c biogenesis%2C ATPase component gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_822 VAA049_823 VAA049_823 ccmB ccmB 878459 879127 + heme exporter protein CcmB ccmB: heme exporter protein CcmB~[O] COG2386 ABC-type transport system involved in cytochrome c biogenesis%2C permease component gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_823 VAA049_824 VAA049_824 ccmC ccmC 879218 879970 + heme exporter CcmC family protein ccmC: heme exporter CcmC family protein~[O] COG0755 ABC-type transport system involved in cytochrome c biogenesis%2C permease component gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_824 VAA049_825 VAA049_825 ccmD ccmD 879970 880176 + heme exporter protein CcmD cytochro_ccmD: heme exporter protein CcmD~[U] COG3114 Heme exporter protein D gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_825 VAA049_826 VAA049_826 VAA049_826 880173 880655 + ccmE family protein [O] COG2332 Cytochrome c-type biogenesis protein CcmE gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_826 VAA049_827 VAA049_827 ccmF ccmF 880652 882607 + cytochrome c-type biogenesis protein CcmF nrfE: cytochrome c-type biogenesis protein CcmF~[O] COG1138 Cytochrome c biogenesis factor gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_827 VAA049_828 VAA049_828 dsbE dsbE 882608 883162 + periplasmic thiol:disulfide oxidoreductase%2C DsbE subfamily protein dsbE: periplasmic thiol:disulfide oxidoreductases%2C DsbE subfamily protein~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_828 VAA049_829 VAA049_829 VAA049_829 883159 883635 + cytochrome C biogenesis family protein [O] COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_829 VAA049_83 VAA049_83 lexA lexA 82650 83279 - repressor LexA lexA: repressor LexA~[KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_83 VAA049_830 VAA049_830 ccmI ccmI 883638 884852 + cytochrome c-type biogenesis protein CcmI cytochro_ccmI: cytochrome c-type biogenesis protein CcmI~[O] COG4235 Cytochrome c biogenesis factor gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_830 VAA049_831 VAA049_831 VAA049_831 884923 885669 + vacJ like lipofamily protein [M] COG2853 Surface lipoprotein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_831 VAA049_832 VAA049_832 VAA049_832 885682 886353 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_832 VAA049_833 VAA049_833 VAA049_833 886725 887228 - ribosomal S4P family protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_833 VAA049_834 VAA049_834 sodB sodB 887343 887927 - superoxide dismutase [P] COG0605 Superoxide dismutase gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_834 VAA049_835 VAA049_835 grxD grxD 888179 888511 + monothiol glutaredoxin%2C Grx4 family [O] COG0278 Glutaredoxin-related protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_835 VAA049_836 VAA049_836 topB topB 888596 890539 + DNA topoisomerase III family protein topB: DNA topoisomerase III family protein~[L] COG0550 Topoisomerase IA gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_836 VAA049_837 VAA049_837 VAA049_837 890560 891480 + histone deacetylase domain protein [BQ] COG0123 Deacetylases%2C including yeast histone deacetylase and acetoin utilization protein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_837 VAA049_838 VAA049_838 VAA049_838 891543 891633 - tRNA-Ser tRNA gene832 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_838 VAA049_839 VAA049_839 VAA049_839 891798 891874 - tRNA-Pro tRNA gene833 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_839 VAA049_84 VAA049_84 plsB plsB 83599 86025 + glycerol-3-phosphate O-acyltransferase plsB: glycerol-3-phosphate O-acyltransferase~[I] COG2937 Glycerol-3-phosphate O-acyltransferase gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_84 VAA049_840 VAA049_840 VAA049_840 891938 893740 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [R] COG3083 Predicted hydrolase of alkaline phosphatase superfamily gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_840 VAA049_841 VAA049_841 VAA049_841 893775 893990 - hypothetical protein conserved hypothetical protein~[S] COG3082 Uncharacterized protein conserved in bacteria gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_841 VAA049_842 VAA049_842 VAA049_842 894075 895076 + 37-kD nucleoid-associated bacterial family protein [R] COG3081 Nucleoid-associated protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_842 VAA049_843 VAA049_843 VAA049_843 895239 896444 + hpt domain protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_843 VAA049_844 VAA049_844 nhaC nhaC 896479 897924 - Na+/H+ antiporter NhaC antiport_nhaC: Na+/H+ antiporter NhaC~[C] COG1757 Na+/H+ antiporter gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_844 VAA049_845 VAA049_845 asd asd 898349 899461 + aspartate-semialdehyde dehydrogenase asd_gamma: aspartate-semialdehyde dehydrogenase~[E] COG0136 Aspartate-semialdehyde dehydrogenase gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_845 VAA049_846 VAA049_846 VAA049_846 899550 900188 - marC integral membrane family protein [U] COG2095 Multiple antibiotic transporter gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_846 VAA049_847 VAA049_847 VAA049_847 900815 903499 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_847 VAA049_848 VAA049_848 VAA049_848 903609 904484 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_848 VAA049_849 VAA049_849 VAA049_849 904602 906161 - sulfate transporter family protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_849 VAA049_85 VAA049_85 ubiA ubiA 86120 86974 - 4-hydroxybenzoate polyprenyl transferase ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase~[H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_85 VAA049_850 VAA049_850 VAA049_850 906516 909674 - ribonuclease%2C Rne/Rng family domain protein RNaseEG: ribonuclease%2C Rne/Rng family domain protein~[J] COG1530 Ribonucleases G and E gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_850 VAA049_851 VAA049_851 VAA049_851 910287 911234 + pseudouridine synthase%2C RluA family protein rluA_subfam: pseudouridine synthase%2C RluA family protein~[J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_851 VAA049_852 VAA049_852 maf maf 911335 911916 - septum formation protein Maf maf: septum formation protein Maf~[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_852 VAA049_853 VAA049_853 VAA049_853 912064 912588 + hypothetical protein conserved hypothetical protein~[R] COG1399 Predicted metal-binding%2C possibly nucleic acid-binding protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_853 VAA049_854 VAA049_854 rpmF rpmF 912623 912793 + ribosomal protein L32 rpmF_bact: ribosomal protein L32~[J] COG0333 Ribosomal protein L32 gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_854 VAA049_855 VAA049_855 plsX plsX 912803 913828 + fatty acid/phospholipid synthesis protein PlsX plsX: fatty acid/phospholipid synthesis protein PlsX~[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_855 VAA049_856 VAA049_856 fabH fabH 913834 914784 + 3-oxoacyl-[acyl-carrier-] synthase III family protein fabH: 3-oxoacyl-[acyl-carrier-] synthase III family protein~[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_856 VAA049_857 VAA049_857 fabD fabD 914854 915777 + malonyl CoA-acyl carrier protein transacylase fabD: malonyl CoA-acyl carrier protein transacylase~[I] COG0331 (acyl-carrier-protein) S-malonyltransferase gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_857 VAA049_858 VAA049_858 fabG fabG 915805 916539 + 3-oxoacyl-[acyl-carrier-protein] reductase 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_858 VAA049_859 VAA049_859 acpP acpP 916775 917011 + acyl carrier protein acyl_carrier: acyl carrier protein~[IQ] COG0236 Acyl carrier protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_859 VAA049_86 VAA049_86 VAA049_86 86975 87514 - chorismate lyase family protein [H] COG3161 4-hydroxybenzoate synthetase (chorismate lyase) gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_86 VAA049_860 VAA049_860 fabF fabF 917100 918344 + beta-ketoacyl-acyl-carrier-protein synthase II fabF: beta-ketoacyl-acyl-carrier-protein synthase II~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_860 VAA049_861 VAA049_861 pabC pabC 918422 919225 + aminodeoxychorismate lyase pabC_Proteo: aminodeoxychorismate lyase~[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_861 VAA049_862 VAA049_862 VAA049_862 919222 920238 + yceG-like family protein [R] COG1559 Predicted periplasmic solute-binding protein gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_862 VAA049_863 VAA049_863 tmk tmk 920235 920873 + dTMP kinase DTMP_kinase: dTMP kinase~[F] COG0125 Thymidylate kinase gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_863 VAA049_864 VAA049_864 holB holB 920866 921840 + DNA polymerase III%2C delta' subunit holB: DNA polymerase III%2C delta' subunit~[L] COG0470 ATPase involved in DNA replication gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_864 VAA049_865 VAA049_865 VAA049_865 921831 922598 + hydrolase%2C TatD family protein [L] COG0084 Mg-dependent DNase gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_865 VAA049_866 VAA049_866 ptsG ptsG 923042 924472 + PTS system%2C glucose-specific IIBC component PTS-II-BC-glcB: PTS system%2C glucose-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_866 VAA049_867 VAA049_867 VAA049_867 924584 924685 - putative membrane protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_867 VAA049_868 VAA049_868 VAA049_868 924685 926145 - neurotransmitter symporter family protein sodium:neurotransmitter symporter family protein~[R] COG0733 Na+-dependent transporters of the SNF family gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_868 VAA049_869 VAA049_869 VAA049_869 926652 927242 - outer membrane beta-barrel domain protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_869 VAA049_87 VAA049_87 VAA049_87 87718 88128 + flagellar basal body-associated FliL family protein [N] COG1580 Flagellar basal body-associated protein gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_87 VAA049_870 VAA049_870 VAA049_870 927378 927467 + putative membrane protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_870 VAA049_871 VAA049_871 VAA049_871 927486 928643 + patatin-like phospholipase family protein [R] COG4667 Predicted esterase of the alpha-beta hydrolase superfamily gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_871 VAA049_872 VAA049_872 pyk pyk 928685 930130 - pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_872 VAA049_873 VAA049_873 VAA049_873 930575 931792 + transcriptional regulator%2C ROK family [KG] COG1940 Transcriptional regulator/sugar kinase gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_873 VAA049_874 VAA049_874 VAA049_874 931897 932841 + response regulator [NT] COG0835 Chemotaxis signal transduction protein gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_874 VAA049_875 VAA049_875 VAA049_875 932915 933271 - hypothetical protein conserved hypothetical protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_875 VAA049_876 VAA049_876 VAA049_876 933411 934331 - hypothetical protein conserved hypothetical protein~[S] COG3016 Uncharacterized iron-regulated protein gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_876 VAA049_877 VAA049_877 VAA049_877 934409 935227 - methyltransferase domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_877 VAA049_878 VAA049_878 VAA049_878 935381 936385 - hypothetical protein conserved hypothetical protein gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_878 VAA049_879 VAA049_879 VAA049_879 936819 937709 - aldose 1-epimerase family protein [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_879 VAA049_88 VAA049_88 VAA049_88 88248 90227 - sensory box protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_88 VAA049_880 VAA049_880 gap gap 937857 938852 - glyceraldehyde-3-phosphate dehydrogenase%2C type I GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase%2C type I~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_880 VAA049_881 VAA049_881 msrB msrB 939191 939595 + methionine-R-sulfoxide reductase [O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_881 VAA049_882 VAA049_882 VAA049_882 939756 940580 - hypothetical protein conserved hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_882 VAA049_883 VAA049_883 VAA049_883 940684 940971 + hypothetical protein conserved hypothetical protein~[S] COG3139 Uncharacterized protein conserved in bacteria gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_883 VAA049_884 VAA049_884 VAA049_884 941069 942082 - L-asparaginase I [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_884 VAA049_885 VAA049_885 sppA sppA 942199 944049 - signal peptide peptidase SppA%2C 67K type sppA_67K: signal peptide peptidase SppA%2C 67K type~[OU] COG0616 Periplasmic serine proteases (ClpP class) gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_885 VAA049_886 VAA049_886 VAA049_886 944279 946279 + flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_886 VAA049_887 VAA049_887 purU purU 946352 947185 - formyltetrahydrofolate deformylase purU: formyltetrahydrofolate deformylase~[F] COG0788 Formyltetrahydrofolate hydrolase gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_887 VAA049_888 VAA049_888 VAA049_888 947455 947658 + hypothetical protein conserved hypothetical protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_888 VAA049_889 VAA049_889 VAA049_889 947750 949690 + DEAD_2 family protein [KL] COG1199 Rad3-related DNA helicases gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_889 VAA049_89 VAA049_89 glpG glpG 90601 91434 - rhomboid family protease GlpG rhombo_GlpG: rhomboid family protease GlpG~[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_89 VAA049_890 VAA049_890 yeaZ yeaZ 949687 950400 + tRNA threonylcarbamoyl adenosine modification protein YeaZ T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ~[O] COG1214 Inactive homolog of metal-dependent proteases%2C putative molecular chaperone gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_890 VAA049_891 VAA049_891 VAA049_891 950460 950765 + putative acyl-CoA synthase gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_891 VAA049_892 VAA049_892 VAA049_892 950782 951339 + outer membrane lipo%2C Slp family protein slp: outer membrane lipo%2C Slp family protein~[M] COG3065 Starvation-inducible outer membrane lipoprotein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_892 VAA049_893 VAA049_893 VAA049_893 951336 952190 + alpha/beta hydrolase family protein [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_893 VAA049_894 VAA049_894 VAA049_894 952315 954014 + AMP-binding enzyme family protein pseudogene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_894 VAA049_896 VAA049_896 rnd rnd 954125 955246 + ribonuclease D rnd: ribonuclease D~[J] COG0349 Ribonuclease D gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_896 VAA049_897 VAA049_897 VAA049_897 955459 957306 + peptidase M3 family protein [E] COG1164 Oligoendopeptidase F gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_897 VAA049_898 VAA049_898 rrtA rrtA 957508 958059 - rhombosortase rhom_GG_sort: rhombosortase~[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_898 VAA049_899 VAA049_899 dgt dgt 958659 959984 - dGTPase family protein dGTP_triPase: dGTPase family protein~[F] COG0232 dGTP triphosphohydrolase gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_899 VAA049_9 VAA049_9 glyS glyS 9540 11606 - glycine--tRNA ligase%2C beta subunit glyS: glycine--tRNA ligase%2C beta subunit~[J] COG0751 Glycyl-tRNA synthetase%2C beta subunit gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_9 VAA049_90 VAA049_90 VAA049_90 91441 91761 - rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_90 VAA049_900 VAA049_900 VAA049_900 958063 958665 + DTW domain protein [S] COG3148 Uncharacterized conserved protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_900 VAA049_901 VAA049_901 VAA049_901 960041 960625 - HD domain protein [R] COG1896 Predicted hydrolases of HD superfamily gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_901 VAA049_902 VAA049_902 VAA049_902 960777 961991 - beta-eliminating lyase family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_902 VAA049_903 VAA049_903 VAA049_903 962206 963513 + isochorismate synthase family protein isochor_syn: isochorismate synthase family protein~[HQ] COG1169 Isochorismate synthase gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_903 VAA049_904 VAA049_904 menD menD 963510 965222 + 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase~[H] COG1165 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_904 VAA049_905 VAA049_905 menH menH 965212 966003 + 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase menH_SHCHC: 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_905 VAA049_906 VAA049_906 menB menB 966028 966894 + naphthoate synthase menB: naphthoate synthase~[H] COG0447 Dihydroxynaphthoic acid synthase gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_906 VAA049_907 VAA049_907 menC menC 966983 967981 + o-succinylbenzoate synthase menC_gamma/gm+: o-succinylbenzoate synthase~[H] COG1441 O-succinylbenzoate synthase gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_907 VAA049_908 VAA049_908 menE menE 967957 969387 + O-succinylbenzoate-CoA ligase menE: O-succinylbenzoate-CoA ligase~[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_908 VAA049_909 VAA049_909 VAA049_909 969419 970579 - benzoate transporter family protein benE: benzoate transporter family protein~[Q] COG3135 Uncharacterized protein involved in benzoate metabolism gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_909 VAA049_91 VAA049_91 VAA049_91 92524 93291 - hydrolase%2C TatD family protein [L] COG0084 Mg-dependent DNase gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_91 VAA049_910 VAA049_910 VAA049_910 970673 971218 + transcriptional regulator%2C HTH_3 family [K] COG1396 Predicted transcriptional regulators gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_910 VAA049_911 VAA049_911 VAA049_911 971271 973286 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_911 VAA049_912 VAA049_912 VAA049_912 973501 975372 - acyltransferase family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_912 VAA049_913 VAA049_913 VAA049_913 975385 975975 - WHG domain protein [K] COG1309 Transcriptional regulator gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_913 VAA049_914 VAA049_914 VAA049_914 976010 976150 - hypothetical protein conserved hypothetical protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_914 VAA049_915 VAA049_915 VAA049_915 976169 977044 + tim44-like domain protein [S] COG4395 Uncharacterized protein conserved in bacteria gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_915 VAA049_916 VAA049_916 VAA049_916 977200 977523 + hypothetical protein conserved hypothetical protein~[S] COG3492 Uncharacterized protein conserved in bacteria gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_916 VAA049_917 VAA049_917 VAA049_917 977605 978093 - hypothetical protein nlpE N-terminal domain protein~[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_917 VAA049_918 VAA049_918 minE minE 978385 978648 - cell division topological specificity factor MinE minE: cell division topological specificity factor MinE~[D] COG0851 Septum formation topological specificity factor gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_918 VAA049_919 VAA049_919 minD minD 978653 979465 - septum site-determining protein MinD minD_bact: septum site-determining protein MinD~[D] COG2894 Septum formation inhibitor-activating ATPase gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_919 VAA049_92 VAA049_92 VAA049_92 93468 94511 + delta-aminolevulinic acid dehydratase family protein [H] COG0113 Delta-aminolevulinic acid dehydratase gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_92 VAA049_920 VAA049_920 minC minC 979486 980148 - septum site-determining protein MinC minC: septum site-determining protein MinC~[D] COG0850 Septum formation inhibitor gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_920 VAA049_921 VAA049_921 VAA049_921 980348 980626 + ycgL domain protein [S] COG3100 Uncharacterized protein conserved in bacteria gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_921 VAA049_922 VAA049_922 VAA049_922 980651 981622 + lytic murein transglycosylase family protein mltB_2: lytic murein transglycosylase family protein~[M] COG2951 Membrane-bound lytic murein transglycosylase B gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_922 VAA049_923 VAA049_923 VAA049_923 981786 982733 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_923 VAA049_924 VAA049_924 VAA049_924 983075 984280 + nucleoside transporter%2C NupC family protein nupC: nucleoside transporter%2C NupC family protein~[F] COG1972 Nucleoside permease gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_924 VAA049_925 VAA049_925 VAA049_925 984534 987074 + carbohydrate binding domain protein [G] COG3469 Chitinase gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_925 VAA049_926 VAA049_926 VAA049_926 987341 988435 + cytochrome c554 and c-prime family protein [C] COG3005 Nitrate/TMAO reductases%2C membrane-bound tetraheme cytochrome c subunit gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_926 VAA049_927 VAA049_927 VAA049_927 988458 990905 + molybdopterin guanine dinucleotide-containing S/N-oxide reductases family protein bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases family protein~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_927 VAA049_928 VAA049_928 VAA049_928 990995 992821 - taurine catabolism dioxygenase TauD%2C TfdA family protein [Q] COG2175 Probable taurine catabolism dioxygenase gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_928 VAA049_929 VAA049_929 VAA049_929 992767 992970 - hypothetical protein gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_929 VAA049_93 VAA049_93 VAA049_93 94618 95046 + acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_93 VAA049_930 VAA049_930 VAA049_930 993180 994070 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_930 VAA049_931 VAA049_931 VAA049_931 994199 995662 - lycopene cyclase family protein [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_931 VAA049_932 VAA049_932 VAA049_932 995647 996495 - taurine catabolism dioxygenase TauD%2C TfdA family protein [Q] COG2175 Probable taurine catabolism dioxygenase gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_932 VAA049_933 VAA049_933 folD folD 996804 997664 - bifunctional protein FolD protein bifunctional protein FolD~[H] COG0190 5%2C10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_933 VAA049_934 VAA049_934 VAA049_934 997866 997942 + tRNA-Arg tRNA gene927 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_934 VAA049_935 VAA049_935 VAA049_935 999538 999825 - hypothetical protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_935 VAA049_936 VAA049_936 VAA049_936 998294 999589 + acyltransferase family protein [S] COG4645 Uncharacterized protein conserved in bacteria gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_936 VAA049_937 VAA049_937 VAA049_937 999903 1000565 + HAD phosphoserine phosphatase-like hydrolase%2C IB family protein HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase%2C IB family protein~[E] COG0560 Phosphoserine phosphatase gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_937 VAA049_938 VAA049_938 VAA049_938 1000612 1001232 - lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_938 VAA049_939 VAA049_939 VAA049_939 1001526 1001975 - acyl-ACP thioesterase family protein [R] COG0824 Predicted thioesterase gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_939 VAA049_94 VAA049_94 polA polA 95744 98548 + DNA polymerase I pola: DNA polymerase I~[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_94 VAA049_940 VAA049_940 VAA049_940 1002065 1002736 - acyltransferase family protein [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_940 VAA049_941 VAA049_941 VAA049_941 1002744 1003676 - cytidylyltransferase family protein [R] COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_941 VAA049_942 VAA049_942 VAA049_942 1003679 1004371 - CDP-alcohol phosphatidyltransferase family protein [I] COG0558 Phosphatidylglycerophosphate synthase gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_942 VAA049_943 VAA049_943 VAA049_943 1004516 1006348 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_943 VAA049_944 VAA049_944 VAA049_944 1006447 1006917 - oxidoreductase molybdopterin binding domain protein [S] COG3915 Uncharacterized protein conserved in bacteria gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_944 VAA049_945 VAA049_945 VAA049_945 1007148 1007249 + putative membrane protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_945 VAA049_946 VAA049_946 VAA049_946 1007477 1008946 + hypothetical protein conserved hypothetical protein~[S] COG0397 Uncharacterized conserved protein gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_946 VAA049_947 VAA049_947 VAA049_947 1009178 1010176 + TRAP transporter solute receptor%2C DctP family protein dctP: TRAP transporter solute receptor%2C DctP family protein~[G] COG1638 TRAP-type C4-dicarboxylate transport system%2C periplasmic component gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_947 VAA049_948 VAA049_948 VAA049_948 1010244 1010906 + tripartite ATP-independent periplasmic transporter%2C DctQ component family protein [G] COG3090 TRAP-type C4-dicarboxylate transport system%2C small permease component gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_948 VAA049_949 VAA049_949 VAA049_949 1010910 1012271 + TRAP transporter%2C DctM subunit dctM: TRAP transporter%2C DctM subunit~[G] COG1593 TRAP-type C4-dicarboxylate transport system%2C large permease component gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_949 VAA049_95 VAA049_95 ysxC ysxC 99296 99958 - ribosome biogenesis GTP-binding protein YsxC GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC~[R] COG0218 Predicted GTPase gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_95 VAA049_950 VAA049_950 VAA049_950 1012396 1013736 - bacterial regulatory%2C Fis family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_950 VAA049_951 VAA049_951 VAA049_951 1013739 1015532 - C4-dicarboxylate transport sensor protein [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_951 VAA049_952 VAA049_952 tig tig 1016031 1017332 + trigger factor tig: trigger factor~[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_952 VAA049_953 VAA049_953 clpP clpP 1017438 1018064 + ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP clpP: ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP~[OU] COG0740 Protease subunit of ATP-dependent Clp proteases gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_953 VAA049_954 VAA049_954 clpX clpX 1018144 1019424 + ATP-dependent Clp protease%2C ATP-binding subunit ClpX clpX: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~[O] COG1219 ATP-dependent protease Clp%2C ATPase subunit gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_954 VAA049_955 VAA049_955 lon lon 1019547 1021907 + endopeptidase La lon: endopeptidase La~[O] COG0466 ATP-dependent Lon protease%2C bacterial type gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_955 VAA049_956 VAA049_956 VAA049_956 1022091 1022363 + bacterial DNA-binding family protein [L] COG0776 Bacterial nucleoid DNA-binding protein gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_956 VAA049_957 VAA049_957 VAA049_957 1022516 1024375 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_957 VAA049_958 VAA049_958 VAA049_958 1024510 1024821 + competence ComEA helix-hairpin-helix repeat region domain protein [L] COG1555 DNA uptake protein and related DNA-binding proteins gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_958 VAA049_959 VAA049_959 cmk cmk 1025004 1025681 + cytidylate kinase cmk: cytidylate kinase~[F] COG0283 Cytidylate kinase gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_959 VAA049_96 VAA049_96 VAA049_96 100110 100727 + cytochrome c family protein [C] COG2863 Cytochrome c553 gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_96 VAA049_960 VAA049_960 rpsA rpsA 1025790 1027460 + ribosomal protein S1 rpsA: ribosomal protein S1~[J] COG0539 Ribosomal protein S1 gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_960 VAA049_961 VAA049_961 ihfB ihfB 1027749 1028027 + integration host factor%2C beta subunit hip: integration host factor%2C beta subunit~[L] COG0776 Bacterial nucleoid DNA-binding protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_961 VAA049_962 VAA049_962 VAA049_962 1028166 1028447 + hypothetical protein conserved hypothetical protein~[S] COG3771 Predicted membrane protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_962 VAA049_963 VAA049_963 VAA049_963 1028459 1029628 + tetratricopeptide repeat family protein [G] COG2956 Predicted N-acetylglucosaminyl transferase gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_963 VAA049_964 VAA049_964 pyrF pyrF 1029701 1030396 + orotidine 5'-phosphate decarboxylase pyrF: orotidine 5'-phosphate decarboxylase~[F] COG0284 Orotidine-5'-phosphate decarboxylase gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_964 VAA049_965 VAA049_965 VAA049_965 1030454 1031224 - tRNA- family protein [FJ] COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_965 VAA049_966 VAA049_966 VAA049_966 1031292 1032056 - hypothetical protein conserved hypothetical protein gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_966 VAA049_967 VAA049_967 VAA049_967 1032345 1033319 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_967 VAA049_968 VAA049_968 VAA049_968 1033381 1034577 + methyltransferase domain protein gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_968 VAA049_969 VAA049_969 ald ald 1034619 1035743 - alanine dehydrogenase alaDH: alanine dehydrogenase~[E] COG0686 Alanine dehydrogenase gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_969 VAA049_97 VAA049_97 VAA049_97 100928 101566 + methyltransferase domain protein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_97 VAA049_970 VAA049_970 lrp lrp 1035900 1036394 + leucine-responsive regulatory protein [K] COG1522 Transcriptional regulators gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_970 VAA049_971 VAA049_971 VAA049_971 1036572 1039454 + ftsK/SpoIIIE family protein [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_971 VAA049_972 VAA049_972 VAA049_972 1039529 1040050 - disulfide bond formation DsbB family protein [O] COG1495 Disulfide bond formation protein DsbB gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_972 VAA049_973 VAA049_973 nhaB nhaB 1040130 1041722 - Na+/H+ antiporter NhaB nhaB: Na+/H+ antiporter NhaB~[P] COG3067 Na+/H+ antiporter gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_973 VAA049_974 VAA049_974 fadR fadR 1042367 1043206 + fatty acid metabolism transcriptional regulator FadR fadR_gamma: fatty acid metabolism transcriptional regulator FadR~[K] COG2186 Transcriptional regulators gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_974 VAA049_975 VAA049_975 VAA049_975 1043441 1044592 - hypothetical protein conserved hypothetical protein gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_975 VAA049_976 VAA049_976 VAA049_976 1044762 1046753 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_976 VAA049_977 VAA049_977 VAA049_977 1047013 1047363 + HIT domain protein [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_977 VAA049_978 VAA049_978 VAA049_978 1047397 1048794 + hypothetical protein conserved hypothetical protein~[S] COG3014 Uncharacterized protein conserved in bacteria gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_978 VAA049_979 VAA049_979 VAA049_979 1048794 1049183 + hypothetical protein conserved hypothetical protein~[R] COG5633 Predicted periplasmic lipoprotein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_979 VAA049_98 VAA049_98 VAA049_98 101566 102114 + der GTPase activator family protein [S] COG3078 Uncharacterized protein conserved in bacteria gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_98 VAA049_980 VAA049_980 VAA049_980 1049236 1049826 + curli production assembly/transport component CsgG family protein [R] COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_980 VAA049_981 VAA049_981 VAA049_981 1049854 1050714 + phosphotransferase enzyme family protein [M] COG0510 Predicted choline kinase involved in LPS biosynthesis gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_981 VAA049_982 VAA049_982 VAA049_982 1050894 1051433 + hypothetical protein conserved hypothetical protein~[R] COG3150 Predicted esterase gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_982 VAA049_983 VAA049_983 VAA049_983 1051791 1053080 + FAD dependent oxidoreductase family protein [C] COG1252 NADH dehydrogenase%2C FAD-containing subunit gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_983 VAA049_984 VAA049_984 VAA049_984 1053192 1053728 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_984 VAA049_985 VAA049_985 VAA049_985 1054013 1056088 - PQQ enzyme repeat family protein gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_985 VAA049_986 VAA049_986 VAA049_986 1056423 1057187 - hypothetical protein conserved hypothetical protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_986 VAA049_987 VAA049_987 mfd mfd 1057363 1060830 - transcription-repair coupling factor mfd: transcription-repair coupling factor~[LK] COG1197 Transcription-repair coupling factor (superfamily II helicase) gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_987 VAA049_988 VAA049_988 VAA049_988 1060833 1061408 - hypothetical protein conserved hypothetical protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_988 VAA049_989 VAA049_989 VAA049_989 1061584 1062792 + liporeleasing system%2C transmembrane%2C LolC/E family protein lolCE: liporeleasing system%2C transmembrane%2C LolC/E family protein~[M] COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_989 VAA049_99 VAA049_99 VAA049_99 102124 102612 + hypothetical protein conserved hypothetical protein gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_99 VAA049_990 VAA049_990 lolD lolD 1062785 1063471 + liporeleasing system%2C ATP-binding protein lolD_lipo_ex: liporeleasing system%2C ATP-binding protein~[V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_990 VAA049_991 VAA049_991 lolE lolE 1063472 1064716 + liporeleasing system%2C transmembrane protein LolE lolE_release: liporeleasing system%2C transmembrane protein LolE~[M] COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_991 VAA049_992 VAA049_992 VAA049_992 1064831 1065361 - hypothetical protein conserved hypothetical protein~[S] COG3216 Uncharacterized protein conserved in bacteria gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_992 VAA049_993 VAA049_993 VAA049_993 1065370 1067613 + DNA internalization-related competence protein ComEC/Rec2 comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2~[R] COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_993 VAA049_994 VAA049_994 msbA msbA 1067644 1069392 + lipid A export permease/ATP-binding protein MsbA msbA_lipidA: lipid A export permease/ATP-binding protein MsbA~[V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_994 VAA049_995 VAA049_995 lpxK lpxK 1069395 1070402 + tetraacyldisaccharide 4'-kinase lpxK: tetraacyldisaccharide 4'-kinase~[M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_995 VAA049_996 VAA049_996 VAA049_996 1070383 1070562 + trm112p-like family protein [S] COG2835 Uncharacterized conserved protein gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_996 VAA049_997 VAA049_997 kdsB kdsB 1070562 1071320 + 3-deoxy-D-manno-octulosonate cytidylyltransferase kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase~[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_997 VAA049_998 VAA049_998 VAA049_998 1071422 1072972 - spoVR like family protein [S] COG2719 Uncharacterized conserved protein gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_998 VAA049_999 VAA049_999 VAA049_999 1072985 1074256 - hypothetical protein conserved hypothetical protein~[S] COG2718 Uncharacterized conserved protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=VAA049_999