locus-tag class description NH62_10001 PF07690 Major Facilitator Superfamily NH62_10002 PF03009 Glycerophosphoryl diester phosphodiesterase family NH62_10004 PF01048 Phosphorylase superfamily NH62_10005 PF04973 Nicotinamide mononucleotide transporter NH62_10006 PF00356 Bacterial regulatory proteins, lacI family NH62_10007 PF00294 pfkB family carbohydrate kinase NH62_10008 PF13407 Periplasmic binding protein domain NH62_10009 PF02653 Branched-chain amino acid transport system / permease component NH62_10010 PF00005 ABC transporter NH62_10011 PF05025 RbsD / FucU transport protein family NH62_10014 PF04717 Type VI secretion system, phage-baseplate injector NH62_10014 PF16671 Actin cross-linking domain NH62_10020 PF10431 C-terminal, D2-small domain, of ClpB protein NH62_10020 PF17871 AAA lid domain NH62_10020 PF00004 ATPase family associated with various cellular activities (AAA) NH62_10020 PF07724 AAA domain (Cdc48 subfamily) NH62_10032 PF00849 RNA pseudouridylate synthase NH62_10033 PF01740 STAS domain NH62_10033 PF00916 Sulfate permease family NH62_10034 PF13419 Haloacid dehalogenase-like hydrolase NH62_10035 PF00196 Bacterial regulatory proteins, luxR family NH62_10035 PF00563 EAL domain NH62_10036 PF00581 Rhodanese-like domain NH62_10037 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NH62_10037 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NH62_10038 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NH62_10038 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NH62_10040 PF02868 Thermolysin metallopeptidase, alpha-helical domain NH62_10040 PF07504 Fungalysin/Thermolysin Propeptide Motif NH62_10040 PF01447 Thermolysin metallopeptidase, catalytic domain NH62_10040 PF01483 Proprotein convertase P-domain NH62_10044 PF02001 Protein of unknown function DUF134 NH62_10047 PF00375 Sodium:dicarboxylate symporter family NH62_10051 PF00376 MerR family regulatory protein NH62_10051 PF09278 MerR, DNA binding NH62_10052 PF07690 Major Facilitator Superfamily NH62_10053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10053 PF03466 LysR substrate binding domain NH62_10054 PF13188 PAS domain NH62_10054 PF00563 EAL domain NH62_10054 PF00990 Diguanylate cyclase, GGDEF domain NH62_10054 PF03707 Bacterial signalling protein N terminal repeat NH62_10055 PF01476 LysM domain NH62_10055 PF08525 Opacity-associated protein A N-terminal motif NH62_10055 PF01551 Peptidase family M23 NH62_10057 PF00916 Sulfate permease family NH62_10057 PF01740 STAS domain NH62_10060 PF00990 Diguanylate cyclase, GGDEF domain NH62_10060 PF00072 Response regulator receiver domain NH62_10061 PF00005 ABC transporter NH62_10062 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10063 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10064 PF12849 PBP superfamily domain NH62_10065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10065 PF12729 Four helix bundle sensory module for signal transduction NH62_10065 PF00672 HAMP domain NH62_10069 PF07715 TonB-dependent Receptor Plug Domain NH62_10069 PF00593 TonB dependent receptor NH62_10070 PF00326 Prolyl oligopeptidase family NH62_10070 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NH62_10071 PF00270 DEAD/DEAH box helicase NH62_10071 PF00271 Helicase conserved C-terminal domain NH62_10073 PF03734 L,D-transpeptidase catalytic domain NH62_10073 PF01476 LysM domain NH62_10073 PF17969 L,D-transpeptidase C-terminal domain NH62_10074 PF03441 FAD binding domain of DNA photolyase NH62_10074 PF00875 DNA photolyase NH62_10075 PF13411 MerR HTH family regulatory protein NH62_10076 PF08349 Protein of unknown function (DUF1722) NH62_10077 PF01048 Phosphorylase superfamily NH62_10080 PF00990 Diguanylate cyclase, GGDEF domain NH62_10081 PF11742 Protein of unknown function (DUF3302) NH62_10082 PF00529 HlyD membrane-fusion protein of T1SS NH62_10082 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_10085 PF07238 PilZ domain NH62_10085 PF12945 Flagellar protein YcgR NH62_10086 PF03616 Sodium/glutamate symporter NH62_10089 PF02630 SCO1/SenC NH62_10091 PF00375 Sodium:dicarboxylate symporter family NH62_10092 PF01569 PAP2 superfamily NH62_10096 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10096 PF00672 HAMP domain NH62_10096 PF02743 Cache domain NH62_10099 PF00704 Glycosyl hydrolases family 18 NH62_10099 PF08329 Chitinase A, N-terminal domain NH62_10100 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NH62_10101 PF00939 Sodium:sulfate symporter transmembrane region NH62_10103 PF01757 Acyltransferase family NH62_10103 PF00842 Alanine racemase, C-terminal domain NH62_10103 PF01168 Alanine racemase, N-terminal domain NH62_10108 PF04717 Type VI secretion system, phage-baseplate injector NH62_10108 PF16671 Actin cross-linking domain NH62_10109 PF05638 Type VI secretion system effector, Hcp NH62_10110 PF00128 Alpha amylase, catalytic domain NH62_10110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NH62_10110 PF02806 Alpha amylase, C-terminal all-beta domain NH62_10111 PF02446 4-alpha-glucanotransferase NH62_10112 PF00343 Carbohydrate phosphorylase NH62_10113 PF17874 MalT-like TPR region NH62_10113 PF00196 Bacterial regulatory proteins, luxR family NH62_10114 PF10928 Protein of unknown function (DUF2810) NH62_10115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10115 PF00672 HAMP domain NH62_10115 PF17200 Single Cache domain 2 NH62_10116 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH62_10116 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH62_10117 PF01709 Transcriptional regulator NH62_10122 PF13614 AAA domain NH62_10122 PF18607 ParA helix turn helix domain NH62_10123 PF02195 ParB-like nuclease domain NH62_10123 PF08775 ParB family NH62_10124 PF13416 Bacterial extracellular solute-binding protein NH62_10125 PF05127 Helicase NH62_10125 PF13718 GNAT acetyltransferase 2 NH62_10127 PF00501 AMP-binding enzyme NH62_10131 PF00072 Response regulator receiver domain NH62_10131 PF00486 Transcriptional regulatory protein, C terminal NH62_10132 PF00512 His Kinase A (phospho-acceptor) domain NH62_10132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10132 PF08521 Two-component sensor kinase N-terminal NH62_10133 PF08019 Phosphoethanolamine transferase EptA/EptB NH62_10133 PF00884 Sulfatase NH62_10134 PF00005 ABC transporter NH62_10134 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_10135 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10135 PF12911 N-terminal TM domain of oligopeptide transport permease C NH62_10136 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10139 PF00072 Response regulator receiver domain NH62_10140 PF01627 Hpt domain NH62_10140 PF02895 Signal transducing histidine kinase, homodimeric domain NH62_10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10140 PF01584 CheW-like domain NH62_10140 PF09078 CheY binding NH62_10141 PF01584 CheW-like domain NH62_10142 PF01584 CheW-like domain NH62_10143 PF02203 Tar ligand binding domain homologue NH62_10143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10143 PF00672 HAMP domain NH62_10144 PF01739 CheR methyltransferase, SAM binding domain NH62_10144 PF03705 CheR methyltransferase, all-alpha domain NH62_10145 PF03975 CheD chemotactic sensory transduction NH62_10146 PF01339 CheB methylesterase NH62_10146 PF00072 Response regulator receiver domain NH62_10147 PF02743 Cache domain NH62_10147 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10147 PF00672 HAMP domain NH62_10149 PF00486 Transcriptional regulatory protein, C terminal NH62_10149 PF00072 Response regulator receiver domain NH62_10151 PF00664 ABC transporter transmembrane region NH62_10151 PF00005 ABC transporter NH62_10151 PF03412 Peptidase C39 family NH62_10154 PF00529 HlyD membrane-fusion protein of T1SS NH62_10155 PF01243 Pyridoxamine 5'-phosphate oxidase NH62_10155 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NH62_10156 PF00072 Response regulator receiver domain NH62_10156 PF00196 Bacterial regulatory proteins, luxR family NH62_10158 PF03781 Sulfatase-modifying factor enzyme 1 NH62_10160 PF12833 Helix-turn-helix domain NH62_10161 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NH62_10161 PF14850 DNA-binding domain of Proline dehydrogenase NH62_10161 PF01619 Proline dehydrogenase NH62_10161 PF00171 Aldehyde dehydrogenase family NH62_10163 PF00474 Sodium:solute symporter family NH62_10165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10165 PF00672 HAMP domain NH62_10165 PF02743 Cache domain NH62_10166 PF01037 Lrp/AsnC ligand binding domain NH62_10167 PF00171 Aldehyde dehydrogenase family NH62_10168 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NH62_10168 PF01276 Orn/Lys/Arg decarboxylase, major domain NH62_10168 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NH62_10169 PF13520 Amino acid permease NH62_10170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NH62_10171 PF04013 Putative SAM-dependent RNA methyltransferase NH62_10172 PF03466 LysR substrate binding domain NH62_10172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10173 PF00106 short chain dehydrogenase NH62_10174 PF00672 HAMP domain NH62_10174 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10174 PF02743 Cache domain NH62_10175 PF03466 LysR substrate binding domain NH62_10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10176 PF13460 NAD(P)H-binding NH62_10178 PF00857 Isochorismatase family NH62_10181 PF00892 EamA-like transporter family NH62_10186 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NH62_10187 PF05068 Mannitol repressor NH62_10188 PF08125 Mannitol dehydrogenase C-terminal domain NH62_10188 PF01232 Mannitol dehydrogenase Rossmann domain NH62_10189 PF02378 Phosphotransferase system, EIIC NH62_10189 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH62_10189 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH62_10191 PF01551 Peptidase family M23 NH62_10191 PF04225 Opacity-associated protein A LysM-like domain NH62_10192 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH62_10192 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH62_10192 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH62_10192 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH62_10193 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10194 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_10195 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10196 PF00005 ABC transporter NH62_10197 PF00793 DAHP synthetase I family NH62_10199 PF00672 HAMP domain NH62_10199 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10202 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10202 PF12729 Four helix bundle sensory module for signal transduction NH62_10202 PF00672 HAMP domain NH62_10204 PF00128 Alpha amylase, catalytic domain NH62_10204 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NH62_10205 PF02264 LamB porin NH62_10206 PF07148 Maltose operon periplasmic protein precursor (MalM) NH62_10208 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NH62_10212 PF03466 LysR substrate binding domain NH62_10212 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10213 PF07681 DoxX NH62_10214 PF06029 AlkA N-terminal domain NH62_10214 PF00730 HhH-GPD superfamily base excision DNA repair protein NH62_10215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NH62_10215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NH62_10217 PF03600 Citrate transporter NH62_10218 PF07670 Nucleoside recognition NH62_10219 PF07670 Nucleoside recognition NH62_10220 PF00462 Glutaredoxin NH62_10221 PF00892 EamA-like transporter family NH62_10222 PF13609 Gram-negative porin NH62_10223 PF02566 OsmC-like protein NH62_10224 PF01047 MarR family NH62_10225 PF01557 Fumarylacetoacetate (FAA) hydrolase family NH62_10228 PF12833 Helix-turn-helix domain NH62_10229 PF01810 LysE type translocator NH62_10231 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH62_10233 PF00005 ABC transporter NH62_10233 PF00664 ABC transporter transmembrane region NH62_10235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH62_10237 PF03466 LysR substrate binding domain NH62_10237 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10238 PF00271 Helicase conserved C-terminal domain NH62_10238 PF00270 DEAD/DEAH box helicase NH62_10239 PF01554 MatE NH62_10240 PF00672 HAMP domain NH62_10240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10241 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10241 PF08447 PAS fold NH62_10242 PF00391 PEP-utilising enzyme, mobile domain NH62_10242 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NH62_10242 PF02896 PEP-utilising enzyme, TIM barrel domain NH62_10243 PF03618 Kinase/pyrophosphorylase NH62_10245 PF01070 FMN-dependent dehydrogenase NH62_10246 PF02652 L-lactate permease NH62_10247 PF03466 LysR substrate binding domain NH62_10247 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10249 PF17200 Single Cache domain 2 NH62_10249 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10249 PF00672 HAMP domain NH62_10250 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_10251 PF00005 ABC transporter NH62_10251 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_10253 PF13654 AAA domain NH62_10253 PF05362 Lon protease (S16) C-terminal proteolytic domain NH62_10254 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10254 PF00672 HAMP domain NH62_10254 PF17200 Single Cache domain 2 NH62_10256 PF07690 Major Facilitator Superfamily NH62_10258 PF06865 Pyrimidine/purine nucleoside phosphorylase NH62_10259 PF02678 Pirin NH62_10259 PF05726 Pirin C-terminal cupin domain NH62_10261 PF00563 EAL domain NH62_10261 PF00990 Diguanylate cyclase, GGDEF domain NH62_10262 PF03466 LysR substrate binding domain NH62_10262 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10266 PF00563 EAL domain NH62_10266 PF00990 Diguanylate cyclase, GGDEF domain NH62_10266 PF03707 Bacterial signalling protein N terminal repeat NH62_10269 PF00990 Diguanylate cyclase, GGDEF domain NH62_10270 PF01047 MarR family NH62_10271 PF00072 Response regulator receiver domain NH62_10271 PF01584 CheW-like domain NH62_10273 PF00196 Bacterial regulatory proteins, luxR family NH62_10274 PF01906 Putative heavy-metal-binding NH62_10277 PF13302 Acetyltransferase (GNAT) domain NH62_10278 PF00005 ABC transporter NH62_10278 PF08402 TOBE domain NH62_10279 PF01547 Bacterial extracellular solute-binding protein NH62_10280 PF14785 Maltose transport system permease protein MalF P2 domain NH62_10280 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10281 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10284 PF00455 DeoR C terminal sensor domain NH62_10284 PF08220 DeoR-like helix-turn-helix domain NH62_10285 PF00990 Diguanylate cyclase, GGDEF domain NH62_10285 PF08448 PAS fold NH62_10287 PF00072 Response regulator receiver domain NH62_10287 PF12833 Helix-turn-helix domain NH62_10290 PF00313 'Cold-shock' DNA-binding domain NH62_10292 PF05661 Protein of unknown function (DUF808) NH62_10293 PF05958 tRNA (Uracil-5-)-methyltransferase NH62_10295 PF05656 Protein of unknown function (DUF805) NH62_10297 PF01979 Amidohydrolase family NH62_10298 PF03476 MOSC N-terminal beta barrel domain NH62_10298 PF00111 2Fe-2S iron-sulfur cluster binding domain NH62_10298 PF00111 2Fe-2S iron-sulfur cluster binding domain NH62_10298 PF03476 MOSC N-terminal beta barrel domain NH62_10298 PF03473 MOSC domain NH62_10298 PF03473 MOSC domain NH62_10299 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10299 PF02743 Cache domain NH62_10299 PF00672 HAMP domain NH62_10305 PF00005 ABC transporter NH62_10306 PF01032 FecCD transport family NH62_10307 PF01497 Periplasmic binding protein NH62_10308 PF02472 Biopolymer transport protein ExbD/TolR NH62_10309 PF01618 MotA/TolQ/ExbB proton channel family NH62_10310 PF03544 Gram-negative bacterial TonB protein C-terminal NH62_10311 PF04055 Radical SAM superfamily NH62_10312 PF06228 Haem utilisation ChuX/HutX NH62_10313 PF01243 Pyridoxamine 5'-phosphate oxidase NH62_10314 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10314 PF00672 HAMP domain NH62_10315 PF05651 Putative sugar diacid recognition NH62_10315 PF13556 PucR C-terminal helix-turn-helix domain NH62_10315 PF17853 GGDEF-like domain NH62_10316 PF02447 GntP family permease NH62_10317 PF02595 Glycerate kinase family NH62_10322 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH62_10322 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NH62_10323 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NH62_10324 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NH62_10324 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NH62_10325 PF01966 HD domain NH62_10330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10331 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10331 PF03466 LysR substrate binding domain NH62_10332 PF01053 Cys/Met metabolism PLP-dependent enzyme NH62_10333 PF00155 Aminotransferase class I and II NH62_10334 PF08240 Alcohol dehydrogenase GroES-like domain NH62_10334 PF00107 Zinc-binding dehydrogenase NH62_10335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NH62_10339 PF00589 Phage integrase family NH62_10339 PF12167 Arm DNA-binding domain NH62_10342 PF01381 Helix-turn-helix NH62_10342 PF00717 Peptidase S24-like NH62_10346 PF03354 Phage Terminase NH62_10352 PF00313 'Cold-shock' DNA-binding domain NH62_10354 PF06965 Na+/H+ antiporter 1 NH62_10357 PF01022 Bacterial regulatory protein, arsR family NH62_10358 PF01758 Sodium Bile acid symporter family NH62_10381 PF02447 GntP family permease NH62_10382 PF01370 NAD dependent epimerase/dehydratase family NH62_10383 PF01261 Xylose isomerase-like TIM barrel NH62_10384 PF00596 Class II Aldolase and Adducin N-terminal domain NH62_10385 PF07005 Sugar-binding N-terminal domain NH62_10385 PF17042 Nucleotide-binding C-terminal domain NH62_10386 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NH62_10386 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NH62_10387 PF00455 DeoR C terminal sensor domain NH62_10387 PF08220 DeoR-like helix-turn-helix domain NH62_10389 PF05598 Transposase domain (DUF772) NH62_10389 PF01609 Transposase DDE domain NH62_10390 PF00291 Pyridoxal-phosphate dependent enzyme NH62_10393 PF02322 Cytochrome bd terminal oxidase subunit II NH62_10394 PF01654 Cytochrome bd terminal oxidase subunit I NH62_10395 PF00392 Bacterial regulatory proteins, gntR family NH62_10395 PF00155 Aminotransferase class I and II NH62_10396 PF00768 D-alanyl-D-alanine carboxypeptidase NH62_10399 PF03922 OmpW family NH62_10400 PF01447 Thermolysin metallopeptidase, catalytic domain NH62_10400 PF03413 Peptidase propeptide and YPEB domain NH62_10400 PF07504 Fungalysin/Thermolysin Propeptide Motif NH62_10400 PF04151 Bacterial pre-peptidase C-terminal domain NH62_10400 PF02868 Thermolysin metallopeptidase, alpha-helical domain NH62_10401 PF13426 PAS domain NH62_10401 PF08447 PAS fold NH62_10401 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10402 PF12262 Bacterial virulence factor lipase N-terminal NH62_10403 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NH62_10404 PF00128 Alpha amylase, catalytic domain NH62_10405 PF00248 Aldo/keto reductase family NH62_10407 PF00005 ABC transporter NH62_10408 PF02687 FtsX-like permease family NH62_10408 PF12704 MacB-like periplasmic core domain NH62_10408 PF00005 ABC transporter NH62_10411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10411 PF07694 5TMR of 5TMR-LYT NH62_10411 PF13492 GAF domain NH62_10411 PF06580 Histidine kinase NH62_10412 PF00072 Response regulator receiver domain NH62_10412 PF04397 LytTr DNA-binding domain NH62_10414 PF00990 Diguanylate cyclase, GGDEF domain NH62_10415 PF13520 Amino acid permease NH62_10418 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH62_10418 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH62_10419 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH62_10420 PF02566 OsmC-like protein NH62_10421 PF00571 CBS domain NH62_10421 PF03471 Transporter associated domain NH62_10421 PF01595 Cyclin M transmembrane N-terminal domain NH62_10422 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NH62_10422 PF14602 Hexapeptide repeat of succinyl-transferase NH62_10422 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_10423 PF00892 EamA-like transporter family NH62_10425 PF03466 LysR substrate binding domain NH62_10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10429 PF13193 AMP-binding enzyme C-terminal domain NH62_10429 PF00501 AMP-binding enzyme NH62_10430 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NH62_10431 PF01329 Pterin 4 alpha carbinolamine dehydratase NH62_10432 PF00583 Acetyltransferase (GNAT) family NH62_10433 PF00202 Aminotransferase class-III NH62_10434 PF06339 Ectoine synthase NH62_10435 PF00696 Amino acid kinase family NH62_10435 PF13840 ACT domain NH62_10437 PF00118 TCP-1/cpn60 chaperonin family NH62_10438 PF00166 Chaperonin 10 Kd subunit NH62_10439 PF00571 CBS domain NH62_10439 PF01769 Divalent cation transporter NH62_10439 PF03448 MgtE intracellular N domain NH62_10441 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NH62_10441 PF17944 Arginine decarboxylase C-terminal helical extension NH62_10441 PF17810 Arginine decarboxylase helical bundle domain NH62_10442 PF00491 Arginase family NH62_10443 PF04151 Bacterial pre-peptidase C-terminal domain NH62_10443 PF04389 Peptidase family M28 NH62_10444 PF07504 Fungalysin/Thermolysin Propeptide Motif NH62_10444 PF03413 Peptidase propeptide and YPEB domain NH62_10444 PF01447 Thermolysin metallopeptidase, catalytic domain NH62_10444 PF04151 Bacterial pre-peptidase C-terminal domain NH62_10444 PF02868 Thermolysin metallopeptidase, alpha-helical domain NH62_10445 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NH62_10445 PF18416 N-acetylglucosamine binding protein domain 2 NH62_10446 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NH62_10447 PF01575 MaoC like domain NH62_10448 PF12849 PBP superfamily domain NH62_10450 PF00575 S1 RNA binding domain NH62_10450 PF00773 RNB domain NH62_10450 PF08206 Ribonuclease B OB domain NH62_10451 PF00270 DEAD/DEAH box helicase NH62_10451 PF00271 Helicase conserved C-terminal domain NH62_10451 PF03880 DbpA RNA binding domain NH62_10453 PF00884 Sulfatase NH62_10454 PF00294 pfkB family carbohydrate kinase NH62_10457 PF13419 Haloacid dehalogenase-like hydrolase NH62_10459 PF00239 Resolvase, N terminal domain NH62_10459 PF02796 Helix-turn-helix domain of resolvase NH62_10464 PF01527 Transposase NH62_10465 PF00665 Integrase core domain NH62_10467 PF13597 Anaerobic ribonucleoside-triphosphate reductase NH62_10467 PF03477 ATP cone domain NH62_10469 PF00155 Aminotransferase class I and II NH62_10470 PF18030 RimK PreATP-grasp domain NH62_10470 PF08443 RimK-like ATP-grasp domain NH62_10471 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH62_10471 PF02378 Phosphotransferase system, EIIC NH62_10472 PF00294 pfkB family carbohydrate kinase NH62_10473 PF00381 PTS HPr component phosphorylation site NH62_10473 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH62_10474 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NH62_10474 PF00356 Bacterial regulatory proteins, lacI family NH62_10475 PF00149 Calcineurin-like phosphoesterase NH62_10475 PF12320 Type 5 capsule protein repressor C-terminal domain NH62_10476 PF13476 AAA domain NH62_10477 PF00072 Response regulator receiver domain NH62_10477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10478 PF00155 Aminotransferase class I and II NH62_10479 PF00155 Aminotransferase class I and II NH62_10481 PF00654 Voltage gated chloride channel NH62_10482 PF02492 CobW/HypB/UreG, nucleotide-binding domain NH62_10482 PF07683 Cobalamin synthesis protein cobW C-terminal domain NH62_10483 PF01926 50S ribosome-binding GTPase NH62_10484 PF02705 K+ potassium transporter NH62_10485 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NH62_10485 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NH62_10485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH62_10485 PF10371 Domain of unknown function NH62_10485 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NH62_10486 PF02702 Osmosensitive K+ channel His kinase sensor domain NH62_10486 PF00512 His Kinase A (phospho-acceptor) domain NH62_10486 PF13493 Domain of unknown function (DUF4118) NH62_10486 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10487 PF00072 Response regulator receiver domain NH62_10487 PF00486 Transcriptional regulatory protein, C terminal NH62_10488 PF02416 mttA/Hcf106 family NH62_10489 PF09335 SNARE associated Golgi protein NH62_10491 PF10388 EAL-domain associated signalling protein domain NH62_10491 PF00563 EAL domain NH62_10493 PF01292 Prokaryotic cytochrome b561 NH62_10494 PF04264 YceI-like domain NH62_10495 PF01226 Formate/nitrite transporter NH62_10496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10496 PF03466 LysR substrate binding domain NH62_10497 PF06496 Protein of unknown function (DUF1097) NH62_10498 PF11398 Protein of unknown function (DUF2813) NH62_10499 PF02872 5'-nucleotidase, C-terminal domain NH62_10499 PF00149 Calcineurin-like phosphoesterase NH62_10501 PF03741 Integral membrane protein TerC family NH62_10503 PF03831 PhnA domain NH62_10503 PF08274 PhnA Zinc-Ribbon NH62_10509 PF00990 Diguanylate cyclase, GGDEF domain NH62_10509 PF17151 Periplasmic sensor domain NH62_10513 PF17158 Membrane-associated sensor, integral membrane domain NH62_10513 PF00990 Diguanylate cyclase, GGDEF domain NH62_10516 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NH62_10516 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NH62_10516 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NH62_10517 PF02233 NAD(P) transhydrogenase beta subunit NH62_10519 PF00486 Transcriptional regulatory protein, C terminal NH62_10519 PF00072 Response regulator receiver domain NH62_10522 PF03701 Uncharacterised protein family (UPF0181) NH62_10524 PF01253 Translation initiation factor SUI1 NH62_10526 PF01820 D-ala D-ala ligase N-terminus NH62_10526 PF07478 D-ala D-ala ligase C-terminus NH62_10528 PF13607 Succinyl-CoA ligase like flavodoxin domain NH62_10528 PF00583 Acetyltransferase (GNAT) family NH62_10528 PF13380 CoA binding domain NH62_10529 PF03466 LysR substrate binding domain NH62_10529 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10530 PF07715 TonB-dependent Receptor Plug Domain NH62_10530 PF00593 TonB dependent receptor NH62_10533 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_10533 PF12793 Sugar transport-related sRNA regulator N-term NH62_10535 PF03061 Thioesterase superfamily NH62_10539 PF00043 Glutathione S-transferase, C-terminal domain NH62_10539 PF02798 Glutathione S-transferase, N-terminal domain NH62_10542 PF12804 MobA-like NTP transferase domain NH62_10542 PF03479 Plants and Prokaryotes Conserved (PCC) domain NH62_10542 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_10543 PF00005 ABC transporter NH62_10543 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_10544 PF12911 N-terminal TM domain of oligopeptide transport permease C NH62_10544 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10545 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10546 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_10551 PF00854 POT family NH62_10553 PF07702 UTRA domain NH62_10553 PF00392 Bacterial regulatory proteins, gntR family NH62_10554 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10556 PF00005 ABC transporter NH62_10558 PF00266 Aminotransferase class-V NH62_10560 PF13419 Haloacid dehalogenase-like hydrolase NH62_10561 PF01272 Transcription elongation factor, GreA/GreB, C-term NH62_10561 PF14760 Rnk N-terminus NH62_10562 PF13419 Haloacid dehalogenase-like hydrolase NH62_10565 PF01741 Large-conductance mechanosensitive channel, MscL NH62_10566 PF01268 Formate--tetrahydrofolate ligase NH62_10567 PF01641 SelR domain NH62_10567 PF01625 Peptide methionine sulfoxide reductase NH62_10568 PF01227 GTP cyclohydrolase I NH62_10569 PF00994 Probable molybdopterin binding domain NH62_10569 PF03454 MoeA C-terminal region (domain IV) NH62_10569 PF03453 MoeA N-terminal region (domain I and II) NH62_10570 PF00899 ThiF family NH62_10572 PF00581 Rhodanese-like domain NH62_10573 PF08329 Chitinase A, N-terminal domain NH62_10573 PF00704 Glycosyl hydrolases family 18 NH62_10574 PF04198 Putative sugar-binding domain NH62_10575 PF00923 Transaldolase/Fructose-6-phosphate aldolase NH62_10576 PF02779 Transketolase, pyrimidine binding domain NH62_10576 PF00456 Transketolase, thiamine diphosphate binding domain NH62_10576 PF02780 Transketolase, C-terminal domain NH62_10582 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH62_10582 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH62_10585 PF06942 GlpM protein NH62_10587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_10587 PF03466 LysR substrate binding domain NH62_10588 PF03992 Antibiotic biosynthesis monooxygenase NH62_10589 PF00881 Nitroreductase family NH62_10590 PF00873 AcrB/AcrD/AcrF family NH62_10593 PF04143 Sulphur transport NH62_10596 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH62_10596 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_10605 PF02378 Phosphotransferase system, EIIC NH62_10605 PF00367 phosphotransferase system, EIIB NH62_10607 PF08244 Glycosyl hydrolases family 32 C terminal NH62_10607 PF00251 Glycosyl hydrolases family 32 N-terminal domain NH62_10608 PF00294 pfkB family carbohydrate kinase NH62_10609 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NH62_10609 PF01266 FAD dependent oxidoreductase NH62_10610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10610 PF00672 HAMP domain NH62_10611 PF13488 Glycine zipper NH62_10611 PF00691 OmpA family NH62_10612 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NH62_10612 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_10613 PF13419 Haloacid dehalogenase-like hydrolase NH62_10614 PF12729 Four helix bundle sensory module for signal transduction NH62_10614 PF00672 HAMP domain NH62_10614 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10615 PF03606 C4-dicarboxylate anaerobic carrier NH62_10616 PF03313 Serine dehydratase alpha chain NH62_10616 PF03315 Serine dehydratase beta chain NH62_10617 PF00474 Sodium:solute symporter family NH62_10620 PF00356 Bacterial regulatory proteins, lacI family NH62_10621 PF00072 Response regulator receiver domain NH62_10621 PF00196 Bacterial regulatory proteins, luxR family NH62_10622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10622 PF00672 HAMP domain NH62_10622 PF07730 Histidine kinase NH62_10622 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NH62_10623 PF12838 4Fe-4S dicluster domain NH62_10623 PF13187 4Fe-4S dicluster domain NH62_10625 PF01568 Molydopterin dinucleotide binding domain NH62_10625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NH62_10625 PF00384 Molybdopterin oxidoreductase NH62_10626 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NH62_10627 PF03264 NapC/NirT cytochrome c family, N-terminal region NH62_10629 PF01966 HD domain NH62_10630 PF00196 Bacterial regulatory proteins, luxR family NH62_10630 PF00072 Response regulator receiver domain NH62_10631 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10631 PF05231 MASE1 NH62_10631 PF07730 Histidine kinase NH62_10632 PF07690 Major Facilitator Superfamily NH62_10634 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10635 PF08402 TOBE domain NH62_10635 PF00005 ABC transporter NH62_10636 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NH62_10638 PF02803 Thiolase, C-terminal domain NH62_10638 PF00108 Thiolase, N-terminal domain NH62_10639 PF00106 short chain dehydrogenase NH62_10640 PF02355 Protein export membrane protein NH62_10640 PF07549 SecD/SecF GG Motif NH62_10641 PF07549 SecD/SecF GG Motif NH62_10641 PF13721 SecD export protein N-terminal TM region NH62_10641 PF02355 Protein export membrane protein NH62_10644 PF00990 Diguanylate cyclase, GGDEF domain NH62_10644 PF17158 Membrane-associated sensor, integral membrane domain NH62_10645 PF00483 Nucleotidyl transferase NH62_10646 PF06483 Chitinase C NH62_10646 PF00704 Glycosyl hydrolases family 18 NH62_10647 PF00465 Iron-containing alcohol dehydrogenase NH62_10649 PF02954 Bacterial regulatory protein, Fis family NH62_10649 PF14532 Sigma-54 interaction domain NH62_10649 PF00072 Response regulator receiver domain NH62_10650 PF00512 His Kinase A (phospho-acceptor) domain NH62_10650 PF02743 Cache domain NH62_10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10653 PF07690 Major Facilitator Superfamily NH62_10654 PF02887 Pyruvate kinase, alpha/beta domain NH62_10654 PF00224 Pyruvate kinase, barrel domain NH62_10655 PF01627 Hpt domain NH62_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10655 PF00072 Response regulator receiver domain NH62_10655 PF00672 HAMP domain NH62_10655 PF00512 His Kinase A (phospho-acceptor) domain NH62_10656 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NH62_10657 PF02142 MGS-like domain NH62_10658 PF00857 Isochorismatase family NH62_10659 PF01219 Prokaryotic diacylglycerol kinase NH62_10662 PF00580 UvrD/REP helicase N-terminal domain NH62_10662 PF12462 DNA helicase IV / RNA helicase N terminal NH62_10662 PF13361 UvrD-like helicase C-terminal domain NH62_10663 PF12805 FUSC-like inner membrane protein yccS NH62_10664 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10664 PF00072 Response regulator receiver domain NH62_10664 PF13188 PAS domain NH62_10664 PF08448 PAS fold NH62_10664 PF00512 His Kinase A (phospho-acceptor) domain NH62_10669 PF00005 ABC transporter NH62_10669 PF03459 TOBE domain NH62_10670 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10672 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NH62_10672 PF07685 CobB/CobQ-like glutamine amidotransferase domain NH62_10673 PF05598 Transposase domain (DUF772) NH62_10673 PF01609 Transposase DDE domain NH62_10679 PF00512 His Kinase A (phospho-acceptor) domain NH62_10679 PF00072 Response regulator receiver domain NH62_10679 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10679 PF09308 LuxQ, periplasmic NH62_10680 PF13407 Periplasmic binding protein domain NH62_10682 PF01541 GIY-YIG catalytic domain NH62_10683 PF04337 Protein of unknown function, DUF480 NH62_10685 PF04363 Protein of unknown function (DUF496) NH62_10688 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NH62_10688 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NH62_10689 PF00230 Major intrinsic protein NH62_10690 PF01266 FAD dependent oxidoreductase NH62_10690 PF04324 BFD-like [2Fe-2S] binding domain NH62_10691 PF00890 FAD binding domain NH62_10692 PF02754 Cysteine-rich domain NH62_10692 PF13183 4Fe-4S dicluster domain NH62_10693 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NH62_10693 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NH62_10694 PF00085 Thioredoxin NH62_10695 PF07690 Major Facilitator Superfamily NH62_10699 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10700 PF00528 Binding-protein-dependent transport system inner membrane component NH62_10701 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_10702 PF00005 ABC transporter NH62_10704 PF05762 VWA domain containing CoxE-like protein NH62_10705 PF17868 AAA lid domain NH62_10705 PF12592 Protein of unknown function (DUF3763) NH62_10705 PF07728 AAA domain (dynein-related subfamily) NH62_10706 PF00293 NUDIX domain NH62_10707 PF01212 Beta-eliminating lyase NH62_10708 PF00034 Cytochrome c NH62_10709 PF00440 Bacterial regulatory proteins, tetR family NH62_10709 PF08361 MAATS-type transcriptional repressor, C-terminal region NH62_10710 PF00270 DEAD/DEAH box helicase NH62_10710 PF00271 Helicase conserved C-terminal domain NH62_10711 PF04336 Acyl carrier protein phosphodiesterase NH62_10713 PF03222 Tryptophan/tyrosine permease family NH62_10714 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10714 PF12729 Four helix bundle sensory module for signal transduction NH62_10714 PF00672 HAMP domain NH62_10715 PF16363 GDP-mannose 4,6 dehydratase NH62_10716 PF03746 LamB/YcsF family NH62_10718 PF02626 Carboxyltransferase domain, subdomain A and B NH62_10720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NH62_10720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NH62_10722 PF00005 ABC transporter NH62_10723 PF13472 GDSL-like Lipase/Acylhydrolase family NH62_10724 PF12241 Trans-2-enoyl-CoA reductase catalytic region NH62_10724 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NH62_10724 PF07055 Enoyl reductase FAD binding domain NH62_10725 PF00990 Diguanylate cyclase, GGDEF domain NH62_10725 PF00563 EAL domain NH62_10725 PF00498 FHA domain NH62_10727 PF00684 DnaJ central domain NH62_10727 PF00226 DnaJ domain NH62_10727 PF01556 DnaJ C terminal domain NH62_10730 PF00665 Integrase core domain NH62_10731 PF01527 Transposase NH62_10733 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10743 PF01797 Transposase IS200 like NH62_10747 PF07859 alpha/beta hydrolase fold NH62_10755 PF05598 Transposase domain (DUF772) NH62_10755 PF01609 Transposase DDE domain NH62_10760 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NH62_10762 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10765 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_10766 PF05598 Transposase domain (DUF772) NH62_10766 PF01609 Transposase DDE domain NH62_10771 PF01965 DJ-1/PfpI family NH62_10771 PF12833 Helix-turn-helix domain NH62_10781 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NH62_10782 PF08212 Lipocalin-like domain NH62_10784 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NH62_10802 PF01609 Transposase DDE domain NH62_10802 PF05598 Transposase domain (DUF772) NH62_10804 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10810 PF02567 Phenazine biosynthesis-like protein NH62_10811 PF01381 Helix-turn-helix NH62_10812 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB NH62_10827 PF05598 Transposase domain (DUF772) NH62_10827 PF01609 Transposase DDE domain NH62_10831 PF01965 DJ-1/PfpI family NH62_10831 PF12833 Helix-turn-helix domain NH62_10833 PF13333 Integrase core domain NH62_10833 PF00665 Integrase core domain NH62_10833 PF13276 HTH-like domain NH62_10834 PF01527 Transposase NH62_10835 PF01725 Ham1 family NH62_10837 PF05598 Transposase domain (DUF772) NH62_10837 PF01609 Transposase DDE domain NH62_10838 PF17676 LD-carboxypeptidase C-terminal domain NH62_10838 PF02016 LD-carboxypeptidase N-terminal domain NH62_10841 PF02567 Phenazine biosynthesis-like protein NH62_10849 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_10851 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10873 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_10874 PF00561 alpha/beta hydrolase fold NH62_10885 PF13495 Phage integrase, N-terminal SAM-like domain NH62_10885 PF00589 Phage integrase family NH62_10886 PF00453 Ribosomal protein L20 NH62_10887 PF01632 Ribosomal protein L35 NH62_10888 PF05198 Translation initiation factor IF-3, N-terminal domain NH62_10888 PF00707 Translation initiation factor IF-3, C-terminal domain NH62_10889 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH62_10889 PF03129 Anticodon binding domain NH62_10889 PF02824 TGS domain NH62_10889 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NH62_10900 PF04984 Phage tail sheath protein subtilisin-like domain NH62_10900 PF17482 Phage tail sheath C-terminal domain NH62_10902 PF07484 Phage Tail Collar Domain NH62_10918 PF00959 Phage lysozyme NH62_10928 PF01381 Helix-turn-helix NH62_10928 PF00717 Peptidase S24-like NH62_10937 PF08669 Glycine cleavage T-protein C-terminal barrel domain NH62_10937 PF01571 Aminomethyltransferase folate-binding domain NH62_10939 PF00464 Serine hydroxymethyltransferase NH62_10940 PF01597 Glycine cleavage H-protein NH62_10941 PF02347 Glycine cleavage system P-protein NH62_10942 PF01797 Transposase IS200 like NH62_10944 PF00194 Eukaryotic-type carbonic anhydrase NH62_10947 PF07943 Penicillin-binding protein 5, C-terminal domain NH62_10947 PF00768 D-alanyl-D-alanine carboxypeptidase NH62_10949 PF02743 Cache domain NH62_10949 PF00672 HAMP domain NH62_10949 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10950 PF07690 Major Facilitator Superfamily NH62_10958 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10958 PF00672 HAMP domain NH62_10958 PF00512 His Kinase A (phospho-acceptor) domain NH62_10959 PF00072 Response regulator receiver domain NH62_10959 PF00486 Transcriptional regulatory protein, C terminal NH62_10962 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_10964 PF00128 Alpha amylase, catalytic domain NH62_10965 PF01292 Prokaryotic cytochrome b561 NH62_10967 PF00455 DeoR C terminal sensor domain NH62_10967 PF08220 DeoR-like helix-turn-helix domain NH62_10968 PF03611 PTS system sugar-specific permease component NH62_10969 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH62_10970 PF00596 Class II Aldolase and Adducin N-terminal domain NH62_10972 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NH62_10973 PF01261 Xylose isomerase-like TIM barrel NH62_10975 PF00486 Transcriptional regulatory protein, C terminal NH62_10975 PF00072 Response regulator receiver domain NH62_10976 PF00512 His Kinase A (phospho-acceptor) domain NH62_10976 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10976 PF00672 HAMP domain NH62_10979 PF00871 Acetokinase family NH62_10981 PF00593 TonB dependent receptor NH62_10981 PF07715 TonB-dependent Receptor Plug Domain NH62_10982 PF12833 Helix-turn-helix domain NH62_10983 PF00005 ABC transporter NH62_10984 PF01032 FecCD transport family NH62_10985 PF01032 FecCD transport family NH62_10989 PF00801 PKD domain NH62_10989 PF05547 Immune inhibitor A peptidase M6 NH62_10990 PF03280 Proteobacterial lipase chaperone protein NH62_10991 PF00561 alpha/beta hydrolase fold NH62_10992 PF12729 Four helix bundle sensory module for signal transduction NH62_10992 PF00672 HAMP domain NH62_10992 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_10993 PF12563 Hemolytic toxin N terminal NH62_10993 PF16458 Beta-prism lectin NH62_10993 PF07968 Leukocidin/Hemolysin toxin family NH62_10994 PF00657 GDSL-like Lipase/Acylhydrolase NH62_10995 PF00990 Diguanylate cyclase, GGDEF domain NH62_10995 PF08448 PAS fold NH62_10996 PF07690 Major Facilitator Superfamily NH62_10997 PF03553 Na+/H+ antiporter family NH62_10999 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_10999 PF00512 His Kinase A (phospho-acceptor) domain NH62_10999 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_11000 PF11849 Domain of unknown function (DUF3369) NH62_11001 PF01467 Cytidylyltransferase-like NH62_11002 PF02540 NAD synthase NH62_11003 PF03605 Anaerobic c4-dicarboxylate membrane transporter NH62_11004 PF00271 Helicase conserved C-terminal domain NH62_11004 PF00270 DEAD/DEAH box helicase NH62_11006 PF00478 IMP dehydrogenase / GMP reductase domain NH62_11008 PF07885 Ion channel NH62_11010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH62_11010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH62_11011 PF03853 YjeF-related protein N-terminus NH62_11011 PF01256 Carbohydrate kinase NH62_11013 PF00072 Response regulator receiver domain NH62_11016 PF03889 Alternative ribosome-rescue factor A NH62_11017 PF00313 'Cold-shock' DNA-binding domain NH62_11018 PF00970 Oxidoreductase FAD-binding domain NH62_11018 PF00042 Globin NH62_11018 PF00175 Oxidoreductase NAD-binding domain NH62_11019 PF00158 Sigma-54 interaction domain NH62_11019 PF01590 GAF domain NH62_11021 PF07687 Peptidase dimerisation domain NH62_11021 PF01546 Peptidase family M20/M25/M40 NH62_11022 PF01773 Na+ dependent nucleoside transporter N-terminus NH62_11022 PF07662 Na+ dependent nucleoside transporter C-terminus NH62_11022 PF07670 Nucleoside recognition NH62_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_11025 PF02743 Cache domain NH62_11025 PF00672 HAMP domain NH62_11026 PF17863 AAA lid domain NH62_11026 PF07726 ATPase family associated with various cellular activities (AAA) NH62_11027 PF01882 Protein of unknown function DUF58 NH62_11030 PF13519 von Willebrand factor type A domain NH62_11030 PF07584 Aerotolerance regulator N-terminal NH62_11033 PF00313 'Cold-shock' DNA-binding domain NH62_11034 PF00563 EAL domain NH62_11034 PF08448 PAS fold NH62_11034 PF00990 Diguanylate cyclase, GGDEF domain NH62_11036 PF12843 Putative quorum-sensing-regulated virulence factor NH62_11037 PF01212 Beta-eliminating lyase NH62_11038 PF03222 Tryptophan/tyrosine permease family NH62_11039 PF00582 Universal stress protein family NH62_11041 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NH62_11041 PF00361 Proton-conducting membrane transporter NH62_11041 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NH62_11041 PF13244 Domain of unknown function (DUF4040) NH62_11045 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NH62_11046 PF03334 Na+/H+ antiporter subunit NH62_11047 PF00175 Oxidoreductase NAD-binding domain NH62_11047 PF00042 Globin NH62_11047 PF00970 Oxidoreductase FAD-binding domain NH62_11048 PF01327 Polypeptide deformylase NH62_11049 PF00041 Fibronectin type III domain NH62_11049 PF12561 ToxR activated gene A lipoprotein domain NH62_11050 PF01266 FAD dependent oxidoreductase NH62_11053 PF00158 Sigma-54 interaction domain NH62_11053 PF00072 Response regulator receiver domain NH62_11053 PF02954 Bacterial regulatory protein, Fis family NH62_11054 PF00512 His Kinase A (phospho-acceptor) domain NH62_11054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_11054 PF02743 Cache domain NH62_20001 PF04362 Bacterial Fe(2+) trafficking NH62_20002 PF00730 HhH-GPD superfamily base excision DNA repair protein NH62_20002 PF10576 Iron-sulfur binding domain of endonuclease III NH62_20002 PF14815 NUDIX domain NH62_20002 PF00633 Helix-hairpin-helix motif NH62_20003 PF02390 Putative methyltransferase NH62_20004 PF04960 Glutaminase NH62_20005 PF04055 Radical SAM superfamily NH62_20005 PF06969 HemN C-terminal domain NH62_20006 PF01725 Ham1 family NH62_20008 PF02594 Uncharacterised ACR, YggU family COG1872 NH62_20009 PF02325 YGGT family NH62_20010 PF14748 Pyrroline-5-carboxylate reductase dimerisation NH62_20010 PF03807 NADP oxidoreductase coenzyme F420-dependent NH62_20011 PF01168 Alanine racemase, N-terminal domain NH62_20012 PF00437 Type II/IV secretion system protein NH62_20013 PF00437 Type II/IV secretion system protein NH62_20015 PF01479 S4 domain NH62_20015 PF00579 tRNA synthetases class I (W and Y) NH62_20016 PF03652 Holliday junction resolvase NH62_20017 PF02622 Uncharacterized ACR, COG1678 NH62_20018 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NH62_20018 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NH62_20019 PF04452 RNA methyltransferase NH62_20020 PF04231 Endonuclease I NH62_20021 PF17283 SprT-like zinc ribbon domain NH62_20021 PF10263 SprT-like family NH62_20022 PF02773 S-adenosylmethionine synthetase, C-terminal domain NH62_20022 PF02772 S-adenosylmethionine synthetase, central domain NH62_20022 PF00438 S-adenosylmethionine synthetase, N-terminal domain NH62_20023 PF02780 Transketolase, C-terminal domain NH62_20023 PF02779 Transketolase, pyrimidine binding domain NH62_20023 PF00456 Transketolase, thiamine diphosphate binding domain NH62_20024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20024 PF03466 LysR substrate binding domain NH62_20025 PF00593 TonB dependent receptor NH62_20025 PF07715 TonB-dependent Receptor Plug Domain NH62_20026 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH62_20026 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH62_20027 PF00162 Phosphoglycerate kinase NH62_20028 PF01116 Fructose-bisphosphate aldolase class-II NH62_20029 PF05552 Conserved TM helix NH62_20029 PF00924 Mechanosensitive ion channel NH62_20030 PF01810 LysE type translocator NH62_20031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20031 PF03466 LysR substrate binding domain NH62_20032 PF04402 Protein of unknown function (DUF541) NH62_20034 PF02887 Pyruvate kinase, alpha/beta domain NH62_20034 PF00224 Pyruvate kinase, barrel domain NH62_20035 PF00455 DeoR C terminal sensor domain NH62_20035 PF08220 DeoR-like helix-turn-helix domain NH62_20036 PF01380 SIS domain NH62_20037 PF03480 Bacterial extracellular solute-binding protein, family 7 NH62_20040 PF03979 Sigma-70 factor, region 1.1 NH62_20040 PF00140 Sigma-70 factor, region 1.2 NH62_20040 PF04539 Sigma-70 region 3 NH62_20040 PF04545 Sigma-70, region 4 NH62_20040 PF04546 Sigma-70, non-essential region NH62_20040 PF04542 Sigma-70 region 2 NH62_20041 PF08275 DNA primase catalytic core, N-terminal domain NH62_20041 PF10410 DnaB-helicase binding domain of primase NH62_20041 PF01807 CHC2 zinc finger NH62_20041 PF08278 DNA primase DnaG DnaB-binding NH62_20042 PF09424 Yqey-like protein NH62_20043 PF01165 Ribosomal protein S21 NH62_20044 PF00814 Glycoprotease family NH62_20045 PF00561 alpha/beta hydrolase fold NH62_20046 PF02660 Glycerol-3-phosphate acyltransferase NH62_20047 PF02152 Dihydroneopterin aldolase NH62_20048 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NH62_20049 PF02673 Bacitracin resistance protein BacA NH62_20050 PF04977 Septum formation initiator NH62_20051 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NH62_20052 PF02542 YgbB family NH62_20053 PF01142 tRNA pseudouridine synthase D (TruD) NH62_20054 PF01975 Survival protein SurE NH62_20056 PF01551 Peptidase family M23 NH62_20056 PF01476 LysM domain NH62_20057 PF04545 Sigma-70, region 4 NH62_20057 PF04539 Sigma-70 region 3 NH62_20057 PF00140 Sigma-70 factor, region 1.2 NH62_20057 PF04542 Sigma-70 region 2 NH62_20058 PF05188 MutS domain II NH62_20058 PF01624 MutS domain I NH62_20058 PF05190 MutS family domain IV NH62_20058 PF00488 MutS domain V NH62_20058 PF05192 MutS domain III NH62_20059 PF00291 Pyridoxal-phosphate dependent enzyme NH62_20061 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20062 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20063 PF12857 TOBE-like domain NH62_20063 PF00005 ABC transporter NH62_20064 PF02464 Competence-damaged protein NH62_20065 PF00154 recA bacterial DNA recombination protein NH62_20066 PF02631 RecX family NH62_20067 PF02272 DHHA1 domain NH62_20067 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NH62_20067 PF01411 tRNA synthetases class II (A) NH62_20068 PF13840 ACT domain NH62_20068 PF01842 ACT domain NH62_20068 PF00696 Amino acid kinase family NH62_20069 PF02599 Global regulator protein family NH62_20078 PF04277 Oxaloacetate decarboxylase, gamma chain NH62_20079 PF00682 HMGL-like NH62_20079 PF02436 Conserved carboxylase domain NH62_20079 PF00364 Biotin-requiring enzyme NH62_20080 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NH62_20082 PF09335 SNARE associated Golgi protein NH62_20083 PF05193 Peptidase M16 inactive domain NH62_20083 PF00675 Insulinase (Peptidase family M16) NH62_20084 PF04262 Glutamate-cysteine ligase NH62_20085 PF02664 S-Ribosylhomocysteinase (LuxS) NH62_20086 PF01595 Cyclin M transmembrane N-terminal domain NH62_20086 PF03471 Transporter associated domain NH62_20086 PF00571 CBS domain NH62_20087 PF01578 Cytochrome C assembly protein NH62_20089 PF02881 SRP54-type protein, helical bundle domain NH62_20089 PF02978 Signal peptide binding domain NH62_20089 PF00448 SRP54-type protein, GTPase domain NH62_20090 PF00886 Ribosomal protein S16 NH62_20091 PF01782 RimM N-terminal domain NH62_20091 PF05239 PRC-barrel domain NH62_20092 PF01746 tRNA (Guanine-1)-methyltransferase NH62_20093 PF01245 Ribosomal protein L19 NH62_20094 PF13180 PDZ domain NH62_20095 PF00595 PDZ domain NH62_20097 PF03969 AFG1-like ATPase NH62_20098 PF00572 Ribosomal protein L13 NH62_20099 PF00380 Ribosomal protein S9/S16 NH62_20100 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NH62_20100 PF00355 Rieske [2Fe-2S] domain NH62_20101 PF00033 Cytochrome b/b6/petB NH62_20101 PF00032 Cytochrome b(C-terminal)/b6/petD NH62_20102 PF02167 Cytochrome C1 family NH62_20103 PF00043 Glutathione S-transferase, C-terminal domain NH62_20103 PF02798 Glutathione S-transferase, N-terminal domain NH62_20104 PF04386 Stringent starvation protein B NH62_20105 PF04972 BON domain NH62_20106 PF13580 SIS domain NH62_20107 PF02021 Uncharacterised protein family UPF0102 NH62_20108 PF04348 LppC putative lipoprotein NH62_20109 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NH62_20110 PF00440 Bacterial regulatory proteins, tetR family NH62_20111 PF00156 Phosphoribosyl transferase domain NH62_20112 PF00484 Carbonic anhydrase NH62_20113 PF00916 Sulfate permease family NH62_20113 PF01740 STAS domain NH62_20114 PF00005 ABC transporter NH62_20115 PF01061 ABC-2 type transporter NH62_20116 PF02569 Pantoate-beta-alanine ligase NH62_20117 PF02548 Ketopantoate hydroxymethyltransferase NH62_20118 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NH62_20119 PF12627 Probable RNA and SrmB- binding site of polymerase A NH62_20119 PF01743 Poly A polymerase head domain NH62_20119 PF12626 Polymerase A arginine-rich C-terminus NH62_20120 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH62_20121 PF01258 Prokaryotic dksA/traR C4-type zinc finger NH62_20122 PF03749 Sugar fermentation stimulation protein RE domain NH62_20122 PF17746 SfsA N-terminal OB domain NH62_20124 PF08482 ATP-dependent helicase C-terminal NH62_20124 PF00271 Helicase conserved C-terminal domain NH62_20124 PF04408 Helicase associated domain (HA2) NH62_20124 PF00270 DEAD/DEAH box helicase NH62_20125 PF14814 Bifunctional transglycosylase second domain NH62_20125 PF00905 Penicillin binding protein transpeptidase domain NH62_20125 PF00912 Transglycosylase NH62_20126 PF01734 Patatin-like phospholipase NH62_20127 PF11791 Aconitate B N-terminal domain NH62_20127 PF06434 Aconitate hydratase 2 N-terminus NH62_20127 PF00330 Aconitase family (aconitate hydratase) NH62_20128 PF06062 Uncharacterised protein family (UPF0231) NH62_20129 PF00543 Nitrogen regulatory protein P-II NH62_20130 PF00909 Ammonium Transporter Family NH62_20131 PF13416 Bacterial extracellular solute-binding protein NH62_20133 PF08402 TOBE domain NH62_20133 PF00005 ABC transporter NH62_20134 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH62_20134 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH62_20134 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH62_20134 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH62_20135 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NH62_20135 PF06165 Glycosyltransferase family 36 NH62_20136 PF00728 Glycosyl hydrolase family 20, catalytic domain NH62_20136 PF02838 Glycosyl hydrolase family 20, domain 2 NH62_20137 PF01869 BadF/BadG/BcrA/BcrD ATPase family NH62_20139 PF00005 ABC transporter NH62_20139 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_20140 PF00005 ABC transporter NH62_20140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_20141 PF12911 N-terminal TM domain of oligopeptide transport permease C NH62_20141 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20142 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20143 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_20144 PF09308 LuxQ, periplasmic NH62_20144 PF00072 Response regulator receiver domain NH62_20144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20144 PF00512 His Kinase A (phospho-acceptor) domain NH62_20145 PF08468 Methyltransferase small domain N-terminal NH62_20145 PF05175 Methyltransferase small domain NH62_20146 PF01594 AI-2E family transporter NH62_20148 PF00202 Aminotransferase class-III NH62_20149 PF01521 Iron-sulphur cluster biosynthesis NH62_20151 PF00873 AcrB/AcrD/AcrF family NH62_20152 PF01551 Peptidase family M23 NH62_20152 PF04225 Opacity-associated protein A LysM-like domain NH62_20153 PF00579 tRNA synthetases class I (W and Y) NH62_20153 PF01479 S4 domain NH62_20154 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NH62_20155 PF13609 Gram-negative porin NH62_20156 PF01272 Transcription elongation factor, GreA/GreB, C-term NH62_20156 PF03449 Transcription elongation factor, N-terminal NH62_20157 PF01985 CRS1 / YhbY (CRM) domain NH62_20158 PF01728 FtsJ-like methyltransferase NH62_20159 PF17862 AAA+ lid domain NH62_20159 PF06480 FtsH Extracellular NH62_20159 PF01434 Peptidase family M41 NH62_20159 PF00004 ATPase family associated with various cellular activities (AAA) NH62_20160 PF00809 Pterin binding enzyme NH62_20161 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH62_20161 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH62_20161 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH62_20161 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH62_20163 PF03840 Preprotein translocase SecG subunit NH62_20166 PF02576 RimP N-terminal domain NH62_20166 PF17384 RimP C-terminal SH3 domain NH62_20167 PF13184 NusA-like KH domain NH62_20167 PF08529 NusA N-terminal domain NH62_20167 PF00575 S1 RNA binding domain NH62_20168 PF04760 Translation initiation factor IF-2, N-terminal region NH62_20168 PF08364 Bacterial translation initiation factor IF-2 associated region NH62_20168 PF11987 Translation-initiation factor 2 NH62_20168 PF00009 Elongation factor Tu GTP binding domain NH62_20169 PF02033 Ribosome-binding factor A NH62_20170 PF01509 TruB family pseudouridylate synthase (N terminal domain) NH62_20170 PF09157 Pseudouridine synthase II TruB, C-terminal NH62_20170 PF16198 tRNA pseudouridylate synthase B C-terminal domain NH62_20171 PF00312 Ribosomal protein S15 NH62_20172 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NH62_20172 PF01138 3' exoribonuclease family, domain 1 NH62_20172 PF00013 KH domain NH62_20172 PF03725 3' exoribonuclease family, domain 2 NH62_20172 PF00575 S1 RNA binding domain NH62_20173 PF07719 Tetratricopeptide repeat NH62_20173 PF13181 Tetratricopeptide repeat NH62_20178 PF03707 Bacterial signalling protein N terminal repeat NH62_20178 PF00990 Diguanylate cyclase, GGDEF domain NH62_20178 PF00563 EAL domain NH62_20180 PF13508 Acetyltransferase (GNAT) domain NH62_20183 PF03707 Bacterial signalling protein N terminal repeat NH62_20183 PF00990 Diguanylate cyclase, GGDEF domain NH62_20183 PF00563 EAL domain NH62_20184 PF03144 Elongation factor Tu domain 2 NH62_20184 PF16658 Class II release factor RF3, C-terminal domain NH62_20184 PF00009 Elongation factor Tu GTP binding domain NH62_20185 PF00271 Helicase conserved C-terminal domain NH62_20185 PF00270 DEAD/DEAH box helicase NH62_20186 PF05175 Methyltransferase small domain NH62_20187 PF05525 Branched-chain amino acid transport protein NH62_20188 PF03462 PCRF domain NH62_20188 PF00472 RF-1 domain NH62_20189 PF00152 tRNA synthetases class II (D, K and N) NH62_20189 PF01336 OB-fold nucleic acid binding domain NH62_20190 PF00072 Response regulator receiver domain NH62_20190 PF02954 Bacterial regulatory protein, Fis family NH62_20190 PF00158 Sigma-54 interaction domain NH62_20192 PF00248 Aldo/keto reductase family NH62_20193 PF02976 DNA mismatch repair enzyme MutH NH62_20194 PF00293 NUDIX domain NH62_20195 PF00391 PEP-utilising enzyme, mobile domain NH62_20195 PF05524 PEP-utilising enzyme, N-terminal NH62_20195 PF02896 PEP-utilising enzyme, TIM barrel domain NH62_20195 PF01590 GAF domain NH62_20196 PF01925 Sulfite exporter TauE/SafE NH62_20197 PF01790 Prolipoprotein diacylglyceryl transferase NH62_20198 PF00303 Thymidylate synthase NH62_20199 PF02690 Na+/Pi-cotransporter NH62_20200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20200 PF03466 LysR substrate binding domain NH62_20201 PF01022 Bacterial regulatory protein, arsR family NH62_20202 PF01649 Ribosomal protein S20 NH62_20203 PF03023 Lipid II flippase MurJ NH62_20204 PF06574 FAD synthetase NH62_20204 PF01687 Riboflavin kinase NH62_20205 PF08264 Anticodon-binding domain of tRNA NH62_20205 PF00133 tRNA synthetases class I (I, L, M and V) NH62_20205 PF06827 Zinc finger found in FPG and IleRS NH62_20206 PF01252 Signal peptidase (SPase) II NH62_20207 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_20208 PF02401 LytB protein NH62_20209 PF02554 Carbon starvation protein CstA NH62_20212 PF13580 SIS domain NH62_20213 PF03702 Anhydro-N-acetylmuramic acid kinase NH62_20214 PF00933 Glycosyl hydrolase family 3 N terminal domain NH62_20215 PF04397 LytTr DNA-binding domain NH62_20215 PF00072 Response regulator receiver domain NH62_20216 PF06580 Histidine kinase NH62_20216 PF07694 5TMR of 5TMR-LYT NH62_20217 PF00793 DAHP synthetase I family NH62_20218 PF02153 Prephenate dehydrogenase NH62_20218 PF01817 Chorismate mutase type II NH62_20219 PF07238 PilZ domain NH62_20220 PF00005 ABC transporter NH62_20220 PF12848 ABC transporter NH62_20221 PF14718 Soluble lytic murein transglycosylase L domain NH62_20221 PF01464 Transglycosylase SLT domain NH62_20222 PF01371 Trp repressor protein NH62_20223 PF01931 Protein of unknown function DUF84 NH62_20224 PF00990 Diguanylate cyclase, GGDEF domain NH62_20224 PF00563 EAL domain NH62_20225 PF13416 Bacterial extracellular solute-binding protein NH62_20226 PF01817 Chorismate mutase type II NH62_20226 PF00800 Prephenate dehydratase NH62_20227 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NH62_20228 PF13525 Outer membrane lipoprotein NH62_20229 PF00849 RNA pseudouridylate synthase NH62_20229 PF01479 S4 domain NH62_20231 PF07724 AAA domain (Cdc48 subfamily) NH62_20231 PF17871 AAA lid domain NH62_20231 PF02861 Clp amino terminal domain, pathogenicity island component NH62_20231 PF10431 C-terminal, D2-small domain, of ClpB protein NH62_20231 PF00004 ATPase family associated with various cellular activities (AAA) NH62_20238 PF00881 Nitroreductase family NH62_20239 PF00037 4Fe-4S binding domain NH62_20241 PF04381 Putative exonuclease, RdgC NH62_20242 PF00486 Transcriptional regulatory protein, C terminal NH62_20242 PF00072 Response regulator receiver domain NH62_20243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20243 PF11808 Phosphate regulon sensor protein PhoR NH62_20243 PF00989 PAS fold NH62_20243 PF00512 His Kinase A (phospho-acceptor) domain NH62_20244 PF12849 PBP superfamily domain NH62_20245 PF02541 Ppx/GppA phosphatase family NH62_20246 PF13089 Polyphosphate kinase N-terminal domain NH62_20246 PF13090 Polyphosphate kinase C-terminal domain 2 NH62_20246 PF02503 Polyphosphate kinase middle domain NH62_20246 PF17941 Polyphosphate kinase C-terminal domain 1 NH62_20247 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20248 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20249 PF00005 ABC transporter NH62_20250 PF01895 PhoU domain NH62_20251 PF03976 Polyphosphate kinase 2 (PPK2) NH62_20252 PF03932 CutC family NH62_20253 PF00578 AhpC/TSA family NH62_20253 PF10417 C-terminal domain of 1-Cys peroxiredoxin NH62_20254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20254 PF03466 LysR substrate binding domain NH62_20255 PF01274 Malate synthase NH62_20256 PF00463 Isocitrate lyase family NH62_20257 PF00571 CBS domain NH62_20258 PF02547 Queuosine biosynthesis protein NH62_20259 PF01702 Queuine tRNA-ribosyltransferase NH62_20260 PF02699 Preprotein translocase subunit NH62_20261 PF02355 Protein export membrane protein NH62_20261 PF13721 SecD export protein N-terminal TM region NH62_20261 PF07549 SecD/SecF GG Motif NH62_20262 PF07549 SecD/SecF GG Motif NH62_20262 PF02355 Protein export membrane protein NH62_20263 PF00459 Inositol monophosphatase family NH62_20264 PF00588 SpoU rRNA Methylase family NH62_20265 PF02082 Transcriptional regulator NH62_20266 PF00266 Aminotransferase class-V NH62_20267 PF01592 NifU-like N terminal domain NH62_20268 PF01521 Iron-sulphur cluster biosynthesis NH62_20269 PF07743 HSCB C-terminal oligomerisation domain NH62_20269 PF00226 DnaJ domain NH62_20270 PF00012 Hsp70 protein NH62_20271 PF00111 2Fe-2S iron-sulfur cluster binding domain NH62_20272 PF04384 Iron-sulphur cluster assembly NH62_20273 PF00883 Cytosol aminopeptidase family, catalytic domain NH62_20273 PF12404 Peptidase NH62_20274 PF00334 Nucleoside diphosphate kinase NH62_20275 PF04055 Radical SAM superfamily NH62_20276 PF13464 Domain of unknown function (DUF4115) NH62_20277 PF04551 GcpE protein NH62_20278 PF03129 Anticodon binding domain NH62_20278 PF13393 Histidyl-tRNA synthetase NH62_20279 PF09976 Tetratricopeptide repeat-like domain NH62_20280 PF13360 PQQ-like domain NH62_20281 PF01926 50S ribosome-binding GTPase NH62_20281 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NH62_20284 PF02601 Exonuclease VII, large subunit NH62_20284 PF13742 OB-fold nucleic acid binding domain NH62_20285 PF00571 CBS domain NH62_20285 PF00478 IMP dehydrogenase / GMP reductase domain NH62_20286 PF00117 Glutamine amidotransferase class-I NH62_20286 PF02540 NAD synthase NH62_20286 PF00958 GMP synthase C terminal domain NH62_20287 PF06483 Chitinase C NH62_20287 PF00704 Glycosyl hydrolases family 18 NH62_20288 PF01184 GPR1/FUN34/yaaH family NH62_20289 PF00857 Isochorismatase family NH62_20289 PF00550 Phosphopantetheine attachment site NH62_20290 PF00501 AMP-binding enzyme NH62_20290 PF13193 AMP-binding enzyme C-terminal domain NH62_20291 PF00425 chorismate binding enzyme NH62_20294 PF01497 Periplasmic binding protein NH62_20295 PF01032 FecCD transport family NH62_20296 PF01032 FecCD transport family NH62_20297 PF00005 ABC transporter NH62_20298 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NH62_20298 PF01648 4'-phosphopantetheinyl transferase superfamily NH62_20299 PF03466 LysR substrate binding domain NH62_20299 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20300 PF14864 Alkyl sulfatase C-terminal NH62_20300 PF00753 Metallo-beta-lactamase superfamily NH62_20300 PF14863 Alkyl sulfatase dimerisation NH62_20301 PF01235 Sodium:alanine symporter family NH62_20302 PF01266 FAD dependent oxidoreductase NH62_20303 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20303 PF03466 LysR substrate binding domain NH62_20306 PF12431 Transcriptional regulator NH62_20306 PF00072 Response regulator receiver domain NH62_20307 PF17203 Single cache domain 3 NH62_20307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20308 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NH62_20309 PF02436 Conserved carboxylase domain NH62_20309 PF00682 HMGL-like NH62_20309 PF00364 Biotin-requiring enzyme NH62_20310 PF04277 Oxaloacetate decarboxylase, gamma chain NH62_20311 PF03390 2-hydroxycarboxylate transporter family NH62_20312 PF08218 Citrate lyase ligase C-terminal domain NH62_20313 PF06857 Malonate decarboxylase delta subunit (MdcD) NH62_20314 PF03328 HpcH/HpaI aldolase/citrate lyase family NH62_20315 PF04223 Citrate lyase, alpha subunit (CitF) NH62_20316 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase NH62_20317 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NH62_20319 PF08032 RNA 2'-O ribose methyltransferase substrate binding NH62_20319 PF00588 SpoU rRNA Methylase family NH62_20320 PF11953 Domain of unknown function (DUF3470) NH62_20320 PF00037 4Fe-4S binding domain NH62_20330 PF01609 Transposase DDE domain NH62_20330 PF05598 Transposase domain (DUF772) NH62_20343 PF00171 Aldehyde dehydrogenase family NH62_20344 PF12561 ToxR activated gene A lipoprotein domain NH62_20344 PF00041 Fibronectin type III domain NH62_20347 PF08534 Redoxin NH62_20348 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20349 PF00486 Transcriptional regulatory protein, C terminal NH62_20351 PF05946 Toxin-coregulated pilus subunit TcpA NH62_20351 PF07963 Prokaryotic N-terminal methylation motif NH62_20353 PF10671 Toxin co-regulated pilus biosynthesis protein Q NH62_20357 PF17456 Toxin-coregulated pilus protein S NH62_20358 PF00437 Type II/IV secretion system protein NH62_20359 PF00482 Type II secretion system (T2SS), protein F NH62_20360 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F NH62_20361 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family NH62_20362 PF06750 Bacterial Peptidase A24 N-terminal domain NH62_20362 PF01478 Type IV leader peptidase family NH62_20363 PF02743 Cache domain NH62_20363 PF00672 HAMP domain NH62_20363 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20367 PF04225 Opacity-associated protein A LysM-like domain NH62_20367 PF01551 Peptidase family M23 NH62_20369 PF13322 Domain of unknown function (DUF4092) NH62_20369 PF17291 N-terminal domain of M60-like peptidases NH62_20369 PF13402 Peptidase M60, enhancin and enhancin-like NH62_20370 PF13356 Arm DNA-binding domain NH62_20370 PF00589 Phage integrase family NH62_20371 PF00589 Phage integrase family NH62_20371 PF13356 Arm DNA-binding domain NH62_20373 PF01668 SmpB protein NH62_20374 PF03364 Polyketide cyclase / dehydrase and lipid transport NH62_20375 PF03658 RnfH family Ubiquitin NH62_20376 PF04355 SmpA / OmlA family NH62_20377 PF02463 RecF/RecN/SMC N terminal domain NH62_20378 PF01513 ATP-NAD kinase NH62_20379 PF01025 GrpE NH62_20380 PF00012 Hsp70 protein NH62_20381 PF00684 DnaJ central domain NH62_20381 PF00226 DnaJ domain NH62_20381 PF01556 DnaJ C terminal domain NH62_20382 PF07963 Prokaryotic N-terminal methylation motif NH62_20382 PF00114 Pilin (bacterial filament) NH62_20387 PF03806 AbgT putative transporter family NH62_20388 PF14437 MafB19-like deaminase NH62_20390 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_20390 PF01464 Transglycosylase SLT domain NH62_20391 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NH62_20391 PF02769 AIR synthase related protein, C-terminal domain NH62_20391 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NH62_20392 PF01797 Transposase IS200 like NH62_20394 PF06786 Uncharacterised protein family (UPF0253) NH62_20396 PF03129 Anticodon binding domain NH62_20396 PF04073 Aminoacyl-tRNA editing domain NH62_20396 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH62_20397 PF18389 TrmO C-terminal domain NH62_20397 PF01980 tRNA-methyltransferase O NH62_20398 PF01197 Ribosomal protein L31 NH62_20399 PF00444 Ribosomal protein L36 NH62_20400 PF03806 AbgT putative transporter family NH62_20401 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NH62_20403 PF13302 Acetyltransferase (GNAT) domain NH62_20406 PF04287 tRNA pseudouridine synthase C NH62_20407 PF00849 RNA pseudouridylate synthase NH62_20408 PF02780 Transketolase, C-terminal domain NH62_20408 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NH62_20408 PF02779 Transketolase, pyrimidine binding domain NH62_20409 PF00348 Polyprenyl synthetase NH62_20410 PF02609 Exonuclease VII small subunit NH62_20411 PF01618 MotA/TolQ/ExbB proton channel family NH62_20412 PF00691 OmpA family NH62_20412 PF13677 Membrane MotB of proton-channel complex MotA/MotB NH62_20413 PF02926 THUMP domain NH62_20413 PF02568 Thiamine biosynthesis protein (ThiI) NH62_20414 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20414 PF03466 LysR substrate binding domain NH62_20415 PF03466 LysR substrate binding domain NH62_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20416 PF04241 Protein of unknown function (DUF423) NH62_20417 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NH62_20417 PF01367 5'-3' exonuclease, C-terminal SAM fold NH62_20418 PF03641 Possible lysine decarboxylase NH62_20418 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NH62_20418 PF11892 Domain of unknown function (DUF3412) NH62_20419 PF00990 Diguanylate cyclase, GGDEF domain NH62_20421 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NH62_20421 PF14489 QueF-like protein NH62_20422 PF07348 Syd protein (SUKH-2) NH62_20423 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NH62_20424 PF03180 NLPA lipoprotein NH62_20425 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20426 PF09383 NIL domain NH62_20426 PF00005 ABC transporter NH62_20428 PF00356 Bacterial regulatory proteins, lacI family NH62_20429 PF02378 Phosphotransferase system, EIIC NH62_20429 PF00367 phosphotransferase system, EIIB NH62_20430 PF16657 Maltogenic Amylase, C-terminal domain NH62_20430 PF00128 Alpha amylase, catalytic domain NH62_20434 PF13533 Biotin-lipoyl like NH62_20435 PF00873 AcrB/AcrD/AcrF family NH62_20436 PF01451 Low molecular weight phosphotyrosine protein phosphatase NH62_20437 PF02350 UDP-N-acetylglucosamine 2-epimerase NH62_20438 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NH62_20438 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NH62_20438 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NH62_20439 PF14602 Hexapeptide repeat of succinyl-transferase NH62_20439 PF12464 Maltose acetyltransferase NH62_20443 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_20445 PF00862 Sucrose synthase NH62_20445 PF00534 Glycosyl transferases group 1 NH62_20447 PF03808 Glycosyl transferase WecB/TagA/CpsF family NH62_20450 PF12561 ToxR activated gene A lipoprotein domain NH62_20450 PF17945 Beta/Gamma crystallin NH62_20453 PF02397 Bacterial sugar transferase NH62_20455 PF02563 Polysaccharide biosynthesis/export protein NH62_20455 PF10531 SLBB domain NH62_20455 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NH62_20456 PF13614 AAA domain NH62_20456 PF13807 G-rich domain on putative tyrosine kinase NH62_20456 PF02706 Chain length determinant protein NH62_20460 PF00464 Serine hydroxymethyltransferase NH62_20462 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NH62_20462 PF04055 Radical SAM superfamily NH62_20463 PF03099 Biotin/lipoate A/B protein ligase family NH62_20464 PF04359 Protein of unknown function (DUF493) NH62_20465 PF00768 D-alanyl-D-alanine carboxypeptidase NH62_20465 PF07943 Penicillin-binding protein 5, C-terminal domain NH62_20466 PF05036 Sporulation related domain NH62_20466 PF03330 Lytic transglycolase NH62_20467 PF01098 Cell cycle protein NH62_20468 PF03717 Penicillin-binding Protein dimerisation domain NH62_20468 PF00905 Penicillin binding protein transpeptidase domain NH62_20469 PF02590 Predicted SPOUT methyltransferase NH62_20471 PF06144 DNA polymerase III, delta subunit NH62_20471 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NH62_20472 PF04390 Lipopolysaccharide-assembly NH62_20473 PF08264 Anticodon-binding domain of tRNA NH62_20473 PF00133 tRNA synthetases class I (I, L, M and V) NH62_20473 PF13603 Leucyl-tRNA synthetase, Domain 2 NH62_20474 PF07295 Zinc-ribbon containing domain NH62_20475 PF00795 Carbon-nitrogen hydrolase NH62_20476 PF00571 CBS domain NH62_20476 PF03471 Transporter associated domain NH62_20477 PF02130 Uncharacterized protein family UPF0054 NH62_20478 PF02562 PhoH-like protein NH62_20479 PF00919 Uncharacterized protein family UPF0004 NH62_20479 PF01938 TRAM domain NH62_20479 PF04055 Radical SAM superfamily NH62_20480 PF01494 FAD binding domain NH62_20481 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NH62_20482 PF05524 PEP-utilising enzyme, N-terminal NH62_20482 PF00391 PEP-utilising enzyme, mobile domain NH62_20482 PF02896 PEP-utilising enzyme, TIM barrel domain NH62_20483 PF00381 PTS HPr component phosphorylation site NH62_20484 PF00291 Pyridoxal-phosphate dependent enzyme NH62_20486 PF04354 ZipA, C-terminal FtsZ-binding domain NH62_20487 PF12826 Helix-hairpin-helix motif NH62_20487 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NH62_20487 PF03120 NAD-dependent DNA ligase OB-fold domain NH62_20487 PF01653 NAD-dependent DNA ligase adenylation domain NH62_20487 PF00533 BRCA1 C Terminus (BRCT) domain NH62_20488 PF13609 Gram-negative porin NH62_20490 PF13411 MerR HTH family regulatory protein NH62_20491 PF01957 NfeD-like C-terminal, partner-binding NH62_20492 PF01145 SPFH domain / Band 7 family NH62_20492 PF16200 C-terminal region of band_7 NH62_20493 PF00085 Thioredoxin NH62_20494 PF01609 Transposase DDE domain NH62_20494 PF05598 Transposase domain (DUF772) NH62_20495 PF00106 short chain dehydrogenase NH62_20496 PF08338 Domain of unknown function (DUF1731) NH62_20496 PF01370 NAD dependent epimerase/dehydratase family NH62_20497 PF12850 Calcineurin-like phosphoesterase superfamily domain NH62_20499 PF17323 Trans-membrane regulatory protein ToxS NH62_20500 PF00486 Transcriptional regulatory protein, C terminal NH62_20501 PF00183 Hsp90 protein NH62_20501 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20502 PF05191 Adenylate kinase, active site lid NH62_20503 PF00762 Ferrochelatase NH62_20504 PF00854 POT family NH62_20505 PF02357 Transcription termination factor nusG NH62_20506 PF13537 Glutamine amidotransferase domain NH62_20506 PF00733 Asparagine synthase NH62_20507 PF02254 TrkA-N domain NH62_20507 PF00999 Sodium/hydrogen exchanger family NH62_20508 PF01047 MarR family NH62_20508 PF00480 ROK family NH62_20509 PF01979 Amidohydrolase family NH62_20510 PF00367 phosphotransferase system, EIIB NH62_20510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NH62_20510 PF02378 Phosphotransferase system, EIIC NH62_20511 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH62_20511 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NH62_20513 PF01416 tRNA pseudouridine synthase NH62_20514 PF17848 Acetyl-coA carboxylase zinc finger domain NH62_20514 PF01039 Carboxyl transferase domain NH62_20515 PF02875 Mur ligase family, glutamate ligase domain NH62_20515 PF08245 Mur ligase middle domain NH62_20516 PF05036 Sporulation related domain NH62_20517 PF02674 Colicin V production protein NH62_20518 PF00156 Phosphoribosyl transferase domain NH62_20519 PF13726 Na+-H+ antiporter family NH62_20519 PF03553 Na+/H+ antiporter family NH62_20520 PF00929 Exonuclease NH62_20521 PF00691 OmpA family NH62_20521 PF18393 MotY N-terminal domain NH62_20522 PF10952 Protein of unknown function (DUF2753) NH62_20523 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_20524 PF10576 Iron-sulfur binding domain of endonuclease III NH62_20524 PF00730 HhH-GPD superfamily base excision DNA repair protein NH62_20524 PF00633 Helix-hairpin-helix motif NH62_20525 PF02508 Rnf-Nqr subunit, membrane protein NH62_20526 PF04205 FMN-binding domain NH62_20527 PF03116 NQR2, RnfD, RnfE family NH62_20528 PF13375 RnfC Barrel sandwich hybrid domain NH62_20528 PF12838 4Fe-4S dicluster domain NH62_20528 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NH62_20528 PF10531 SLBB domain NH62_20529 PF04060 Putative Fe-S cluster NH62_20530 PF02508 Rnf-Nqr subunit, membrane protein NH62_20532 PF04851 Type III restriction enzyme, res subunit NH62_20532 PF17757 UvrB interaction domain NH62_20532 PF12344 Ultra-violet resistance protein B NH62_20532 PF02151 UvrB/uvrC motif NH62_20532 PF00271 Helicase conserved C-terminal domain NH62_20533 PF00158 Sigma-54 interaction domain NH62_20533 PF00072 Response regulator receiver domain NH62_20533 PF02954 Bacterial regulatory protein, Fis family NH62_20534 PF01627 Hpt domain NH62_20535 PF01933 Uncharacterised protein family UPF0052 NH62_20536 PF04055 Radical SAM superfamily NH62_20536 PF06463 Molybdenum Cofactor Synthesis C NH62_20537 PF00994 Probable molybdopterin binding domain NH62_20538 PF01967 MoaC family NH62_20539 PF02597 ThiS family NH62_20540 PF02391 MoaE protein NH62_20541 PF07694 5TMR of 5TMR-LYT NH62_20541 PF00990 Diguanylate cyclase, GGDEF domain NH62_20542 PF07085 DRTGG domain NH62_20542 PF00571 CBS domain NH62_20542 PF03061 Thioesterase superfamily NH62_20542 PF00392 Bacterial regulatory proteins, gntR family NH62_20543 PF00403 Heavy-metal-associated domain NH62_20544 PF01048 Phosphorylase superfamily NH62_20545 PF01048 Phosphorylase superfamily NH62_20547 PF01588 Putative tRNA binding domain NH62_20547 PF09334 tRNA synthetases class I (M) NH62_20548 PF10609 NUBPL iron-transfer P-loop NTPase NH62_20549 PF00485 Phosphoribulokinase / Uridine kinase family NH62_20550 PF05170 AsmA family NH62_20551 PF12557 Cob(I)alamin adenosyltransferase N terminal NH62_20551 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NH62_20552 PF01451 Low molecular weight phosphotyrosine protein phosphatase NH62_20553 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NH62_20554 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NH62_20556 PF08281 Sigma-70, region 4 NH62_20556 PF04542 Sigma-70 region 2 NH62_20557 PF02803 Thiolase, C-terminal domain NH62_20557 PF00108 Thiolase, N-terminal domain NH62_20558 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH62_20558 PF00378 Enoyl-CoA hydratase/isomerase NH62_20558 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH62_20559 PF00881 Nitroreductase family NH62_20560 PF03466 LysR substrate binding domain NH62_20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20561 PF00072 Response regulator receiver domain NH62_20563 PF04304 Protein of unknown function (DUF454) NH62_20564 PF00156 Phosphoribosyl transferase domain NH62_20565 PF12169 DNA polymerase III subunits gamma and tau domain III NH62_20565 PF12170 DNA polymerase III tau subunit V interacting with alpha NH62_20565 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NH62_20566 PF02575 YbaB/EbfC DNA-binding family NH62_20567 PF13662 Toprim domain NH62_20567 PF02132 RecR protein NH62_20568 PF03692 Putative zinc- or iron-chelating domain NH62_20569 PF03692 Putative zinc- or iron-chelating domain NH62_20570 PF00106 short chain dehydrogenase NH62_20571 PF01343 Peptidase family S49 NH62_20571 PF08496 Peptidase family S49 N-terminal NH62_20572 PF00291 Pyridoxal-phosphate dependent enzyme NH62_20573 PF13404 AsnC-type helix-turn-helix domain NH62_20573 PF01037 Lrp/AsnC ligand binding domain NH62_20576 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NH62_20578 PF00990 Diguanylate cyclase, GGDEF domain NH62_20578 PF08448 PAS fold NH62_20579 PF01022 Bacterial regulatory protein, arsR family NH62_20580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH62_20580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH62_20583 PF00704 Glycosyl hydrolases family 18 NH62_20583 PF06483 Chitinase C NH62_20585 PF01161 Phosphatidylethanolamine-binding protein NH62_20588 PF03481 Putative GTP-binding controlling metal-binding NH62_20588 PF01300 Telomere recombination NH62_20591 PF00072 Response regulator receiver domain NH62_20593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20593 PF13426 PAS domain NH62_20593 PF13188 PAS domain NH62_20593 PF00989 PAS fold NH62_20593 PF00512 His Kinase A (phospho-acceptor) domain NH62_20594 PF00512 His Kinase A (phospho-acceptor) domain NH62_20594 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20595 PF00563 EAL domain NH62_20595 PF00990 Diguanylate cyclase, GGDEF domain NH62_20595 PF03707 Bacterial signalling protein N terminal repeat NH62_20595 PF13188 PAS domain NH62_20596 PF02954 Bacterial regulatory protein, Fis family NH62_20596 PF00158 Sigma-54 interaction domain NH62_20596 PF00072 Response regulator receiver domain NH62_20597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20597 PF00072 Response regulator receiver domain NH62_20597 PF08448 PAS fold NH62_20597 PF13188 PAS domain NH62_20597 PF00512 His Kinase A (phospho-acceptor) domain NH62_20598 PF00512 His Kinase A (phospho-acceptor) domain NH62_20598 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_20601 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20602 PF12911 N-terminal TM domain of oligopeptide transport permease C NH62_20602 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20603 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_20603 PF00005 ABC transporter NH62_20604 PF00005 ABC transporter NH62_20604 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_20605 PF13409 Glutathione S-transferase, N-terminal domain NH62_20606 PF01515 Phosphate acetyl/butaryl transferase NH62_20606 PF07085 DRTGG domain NH62_20607 PF00871 Acetokinase family NH62_20608 PF04217 Protein of unknown function, DUF412 NH62_20609 PF09905 DNA-binding protein VF530 NH62_20611 PF02653 Branched-chain amino acid transport system / permease component NH62_20612 PF00005 ABC transporter NH62_20613 PF00990 Diguanylate cyclase, GGDEF domain NH62_20614 PF01207 Dihydrouridine synthase (Dus) NH62_20615 PF07516 SecA Wing and Scaffold domain NH62_20615 PF07517 SecA DEAD-like domain NH62_20615 PF01043 SecA preprotein cross-linking domain NH62_20615 PF02810 SEC-C motif NH62_20616 PF03548 Outer membrane lipoprotein carrier protein LolA NH62_20617 PF12002 MgsA AAA+ ATPase C terminal NH62_20617 PF00004 ATPase family associated with various cellular activities (AAA) NH62_20617 PF16193 AAA C-terminal domain NH62_20618 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NH62_20618 PF02403 Seryl-tRNA synthetase N-terminal domain NH62_20619 PF00202 Aminotransferase class-III NH62_20620 PF04055 Radical SAM superfamily NH62_20620 PF06968 Biotin and Thiamin Synthesis associated domain NH62_20621 PF00155 Aminotransferase class I and II NH62_20622 PF08241 Methyltransferase domain NH62_20625 PF01435 Peptidase family M48 NH62_20627 PF00106 short chain dehydrogenase NH62_20632 PF16036 Chalcone isomerase-like NH62_20634 PF00206 Lyase NH62_20634 PF08328 Adenylosuccinate lyase C-terminal NH62_20635 PF04356 Protein of unknown function (DUF489) NH62_20637 PF00294 pfkB family carbohydrate kinase NH62_20638 PF00816 H-NS histone family NH62_20639 PF03553 Na+/H+ antiporter family NH62_20640 PF01634 ATP phosphoribosyltransferase NH62_20640 PF08029 HisG, C-terminal domain NH62_20641 PF00815 Histidinol dehydrogenase NH62_20642 PF00155 Aminotransferase class I and II NH62_20643 PF08645 Polynucleotide kinase 3 phosphatase NH62_20643 PF00475 Imidazoleglycerol-phosphate dehydratase NH62_20644 PF00117 Glutamine amidotransferase class-I NH62_20645 PF00977 Histidine biosynthesis protein NH62_20646 PF00977 Histidine biosynthesis protein NH62_20647 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NH62_20647 PF01502 Phosphoribosyl-AMP cyclohydrolase NH62_20648 PF00849 RNA pseudouridylate synthase NH62_20649 PF03971 Monomeric isocitrate dehydrogenase NH62_20650 PF00313 'Cold-shock' DNA-binding domain NH62_20651 PF02617 ATP-dependent Clp protease adaptor protein ClpS NH62_20652 PF10431 C-terminal, D2-small domain, of ClpB protein NH62_20652 PF02861 Clp amino terminal domain, pathogenicity island component NH62_20652 PF17871 AAA lid domain NH62_20652 PF07724 AAA domain (Cdc48 subfamily) NH62_20652 PF00004 ATPase family associated with various cellular activities (AAA) NH62_20653 PF06826 Predicted Permease Membrane Region NH62_20653 PF02080 TrkA-C domain NH62_20654 PF00462 Glutaredoxin NH62_20655 PF00465 Iron-containing alcohol dehydrogenase NH62_20655 PF00171 Aldehyde dehydrogenase family NH62_20656 PF01418 Helix-turn-helix domain, rpiR family NH62_20656 PF01380 SIS domain NH62_20657 PF00282 Pyridoxal-dependent decarboxylase conserved domain NH62_20659 PF03956 Lysine exporter LysO NH62_20661 PF04994 TfoX C-terminal domain NH62_20661 PF04993 TfoX N-terminal domain NH62_20664 PF00989 PAS fold NH62_20664 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20664 PF00512 His Kinase A (phospho-acceptor) domain NH62_20666 PF00266 Aminotransferase class-V NH62_20669 PF18030 RimK PreATP-grasp domain NH62_20669 PF08443 RimK-like ATP-grasp domain NH62_20670 PF08003 Protein of unknown function (DUF1698) NH62_20671 PF13649 Methyltransferase domain NH62_20672 PF01904 Protein of unknown function DUF72 NH62_20673 PF02938 GAD domain NH62_20673 PF00152 tRNA synthetases class II (D, K and N) NH62_20673 PF01336 OB-fold nucleic acid binding domain NH62_20674 PF00265 Thymidine kinase NH62_20675 PF00375 Sodium:dicarboxylate symporter family NH62_20676 PF00290 Tryptophan synthase alpha chain NH62_20677 PF00291 Pyridoxal-phosphate dependent enzyme NH62_20678 PF00218 Indole-3-glycerol phosphate synthase NH62_20678 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NH62_20679 PF00591 Glycosyl transferase family, a/b domain NH62_20679 PF02885 Glycosyl transferase family, helical bundle domain NH62_20680 PF00117 Glutamine amidotransferase class-I NH62_20681 PF04715 Anthranilate synthase component I, N terminal region NH62_20681 PF00425 chorismate binding enzyme NH62_20682 PF02811 PHP domain NH62_20683 PF01300 Telomere recombination NH62_20684 PF00849 RNA pseudouridylate synthase NH62_20684 PF01479 S4 domain NH62_20685 PF00005 ABC transporter NH62_20685 PF00664 ABC transporter transmembrane region NH62_20686 PF00664 ABC transporter transmembrane region NH62_20686 PF00005 ABC transporter NH62_20687 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_20689 PF00266 Aminotransferase class-V NH62_20690 PF00990 Diguanylate cyclase, GGDEF domain NH62_20690 PF08448 PAS fold NH62_20691 PF02698 DUF218 domain NH62_20693 PF00390 Malic enzyme, N-terminal domain NH62_20693 PF03949 Malic enzyme, NAD binding domain NH62_20695 PF01259 SAICAR synthetase NH62_20699 PF00691 OmpA family NH62_20699 PF13488 Glycine zipper NH62_20702 PF13183 4Fe-4S dicluster domain NH62_20702 PF02913 FAD linked oxidases, C-terminal domain NH62_20702 PF01565 FAD binding domain NH62_20703 PF04191 Phospholipid methyltransferase NH62_20704 PF00089 Trypsin NH62_20706 PF00221 Aromatic amino acid lyase NH62_20707 PF01175 Urocanase Rossmann-like domain NH62_20707 PF17392 Urocanase C-terminal domain NH62_20707 PF17391 Urocanase N-terminal domain NH62_20708 PF00491 Arginase family NH62_20709 PF01979 Amidohydrolase family NH62_20710 PF07702 UTRA domain NH62_20710 PF00392 Bacterial regulatory proteins, gntR family NH62_20712 PF04269 Protein of unknown function, DUF440 NH62_20713 PF09285 Elongation factor P, C-terminal NH62_20713 PF01132 Elongation factor P (EF-P) OB domain NH62_20713 PF08207 Elongation factor P (EF-P) KOW-like domain NH62_20715 PF13426 PAS domain NH62_20715 PF00990 Diguanylate cyclase, GGDEF domain NH62_20715 PF00563 EAL domain NH62_20716 PF00136 DNA polymerase family B NH62_20716 PF03104 DNA polymerase family B, exonuclease domain NH62_20717 PF00196 Bacterial regulatory proteins, luxR family NH62_20717 PF00072 Response regulator receiver domain NH62_20718 PF01541 GIY-YIG catalytic domain NH62_20718 PF08459 UvrC Helix-hairpin-helix N-terminal NH62_20718 PF02151 UvrB/uvrC motif NH62_20719 PF01066 CDP-alcohol phosphatidyltransferase NH62_20724 PF00072 Response regulator receiver domain NH62_20724 PF00990 Diguanylate cyclase, GGDEF domain NH62_20726 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NH62_20726 PF01409 tRNA synthetases class II core domain (F) NH62_20727 PF03483 B3/4 domain NH62_20727 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NH62_20727 PF01588 Putative tRNA binding domain NH62_20727 PF03147 Ferredoxin-fold anticodon binding domain NH62_20727 PF03484 tRNA synthetase B5 domain NH62_20728 PF00216 Bacterial DNA-binding protein NH62_20731 PF05724 Thiopurine S-methyltransferase (TPMT) NH62_20732 PF02222 ATP-grasp domain NH62_20734 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NH62_20734 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH62_20735 PF04172 LrgB-like family NH62_20736 PF03788 LrgA family NH62_20737 PF00929 Exonuclease NH62_20737 PF08411 Exonuclease C-terminal NH62_20739 PF01641 SelR domain NH62_20740 PF02277 Phosphoribosyltransferase NH62_20741 PF02654 Cobalamin-5-phosphate synthase NH62_20742 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NH62_20744 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NH62_20745 PF01032 FecCD transport family NH62_20746 PF00005 ABC transporter NH62_20749 PF17200 Single Cache domain 2 NH62_20749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20749 PF00672 HAMP domain NH62_20752 PF00994 Probable molybdopterin binding domain NH62_20754 PF00970 Oxidoreductase FAD-binding domain NH62_20754 PF00111 2Fe-2S iron-sulfur cluster binding domain NH62_20754 PF00175 Oxidoreductase NAD-binding domain NH62_20755 PF00268 Ribonucleotide reductase, small chain NH62_20756 PF03477 ATP cone domain NH62_20756 PF02867 Ribonucleotide reductase, barrel domain NH62_20756 PF00317 Ribonucleotide reductase, all-alpha domain NH62_20758 PF00521 DNA gyrase/topoisomerase IV, subunit A NH62_20758 PF03989 DNA gyrase C-terminal domain, beta-propeller NH62_20761 PF07690 Major Facilitator Superfamily NH62_20763 PF00925 GTP cyclohydrolase II NH62_20769 PF05951 Bacterial protein of unknown function (DUF882) NH62_20770 PF00753 Metallo-beta-lactamase superfamily NH62_20773 PF03480 Bacterial extracellular solute-binding protein, family 7 NH62_20775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NH62_20776 PF17200 Single Cache domain 2 NH62_20776 PF07730 Histidine kinase NH62_20777 PF00196 Bacterial regulatory proteins, luxR family NH62_20777 PF00072 Response regulator receiver domain NH62_20778 PF01047 MarR family NH62_20779 PF02028 BCCT, betaine/carnitine/choline family transporter NH62_20780 PF01522 Polysaccharide deacetylase NH62_20781 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH62_20782 PF02378 Phosphotransferase system, EIIC NH62_20783 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NH62_20784 PF02056 Family 4 glycosyl hydrolase NH62_20784 PF11975 Family 4 glycosyl hydrolase C-terminal domain NH62_20785 PF04794 YdjC-like protein NH62_20786 PF00356 Bacterial regulatory proteins, lacI family NH62_20787 PF13506 Glycosyl transferase family 21 NH62_20788 PF04349 Periplasmic glucan biosynthesis protein, MdoG NH62_20789 PF00672 HAMP domain NH62_20789 PF17200 Single Cache domain 2 NH62_20789 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20792 PF00155 Aminotransferase class I and II NH62_20793 PF01966 HD domain NH62_20793 PF00672 HAMP domain NH62_20794 PF02581 Thiamine monophosphate synthase NH62_20794 PF08543 Phosphomethylpyrimidine kinase NH62_20795 PF01336 OB-fold nucleic acid binding domain NH62_20795 PF00152 tRNA synthetases class II (D, K and N) NH62_20796 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20796 PF00672 HAMP domain NH62_20797 PF01242 6-pyruvoyl tetrahydropterin synthase NH62_20798 PF03313 Serine dehydratase alpha chain NH62_20798 PF03315 Serine dehydratase beta chain NH62_20799 PF03222 Tryptophan/tyrosine permease family NH62_20800 PF00293 NUDIX domain NH62_20801 PF00425 chorismate binding enzyme NH62_20801 PF04715 Anthranilate synthase component I, N terminal region NH62_20804 PF04317 YcjX-like family, DUF463 NH62_20805 PF05128 Domain of unknown function (DUF697) NH62_20806 PF00158 Sigma-54 interaction domain NH62_20806 PF18024 Helix-turn-helix domain NH62_20807 PF13302 Acetyltransferase (GNAT) domain NH62_20809 PF00892 EamA-like transporter family NH62_20810 PF00842 Alanine racemase, C-terminal domain NH62_20810 PF01168 Alanine racemase, N-terminal domain NH62_20811 PF00672 HAMP domain NH62_20811 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20812 PF00939 Sodium:sulfate symporter transmembrane region NH62_20813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20813 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_20813 PF00512 His Kinase A (phospho-acceptor) domain NH62_20814 PF02954 Bacterial regulatory protein, Fis family NH62_20814 PF00158 Sigma-54 interaction domain NH62_20814 PF00072 Response regulator receiver domain NH62_20815 PF04393 Protein of unknown function (DUF535) NH62_20816 PF06629 MltA-interacting protein MipA NH62_20817 PF00672 HAMP domain NH62_20817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20817 PF00512 His Kinase A (phospho-acceptor) domain NH62_20818 PF00072 Response regulator receiver domain NH62_20818 PF00486 Transcriptional regulatory protein, C terminal NH62_20822 PF13407 Periplasmic binding protein domain NH62_20823 PF00005 ABC transporter NH62_20824 PF02653 Branched-chain amino acid transport system / permease component NH62_20825 PF01609 Transposase DDE domain NH62_20825 PF05598 Transposase domain (DUF772) NH62_20827 PF01970 Tripartite tricarboxylate transporter TctA family NH62_20830 PF00392 Bacterial regulatory proteins, gntR family NH62_20830 PF07729 FCD domain NH62_20832 PF00285 Citrate synthase, C-terminal domain NH62_20833 PF00694 Aconitase C-terminal domain NH62_20833 PF00330 Aconitase family (aconitate hydratase) NH62_20834 PF04303 PrpF protein NH62_20835 PF16177 Acetyl-coenzyme A synthetase N-terminus NH62_20835 PF00501 AMP-binding enzyme NH62_20835 PF13193 AMP-binding enzyme C-terminal domain NH62_20838 PF01546 Peptidase family M20/M25/M40 NH62_20838 PF07687 Peptidase dimerisation domain NH62_20839 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NH62_20840 PF04209 homogentisate 1,2-dioxygenase NH62_20843 PF14497 Glutathione S-transferase, C-terminal domain NH62_20843 PF02798 Glutathione S-transferase, N-terminal domain NH62_20844 PF00072 Response regulator receiver domain NH62_20845 PF00072 Response regulator receiver domain NH62_20846 PF00672 HAMP domain NH62_20846 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NH62_20846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20846 PF00072 Response regulator receiver domain NH62_20846 PF00512 His Kinase A (phospho-acceptor) domain NH62_20846 PF01627 Hpt domain NH62_20847 PF08534 Redoxin NH62_20847 PF00462 Glutaredoxin NH62_20848 PF00990 Diguanylate cyclase, GGDEF domain NH62_20849 PF10672 S-adenosylmethionine-dependent methyltransferase NH62_20849 PF17785 PUA-like domain NH62_20850 PF00708 Acylphosphatase NH62_20851 PF04358 DsrC like protein NH62_20852 PF01027 Inhibitor of apoptosis-promoting Bax1 NH62_20853 PF00005 ABC transporter NH62_20854 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20855 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20856 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_20857 PF10414 Sirohaem synthase dimerisation region NH62_20857 PF14824 Sirohaem biosynthesis protein central NH62_20857 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NH62_20860 PF04055 Radical SAM superfamily NH62_20861 PF06508 Queuosine biosynthesis protein QueC NH62_20865 PF00563 EAL domain NH62_20865 PF00990 Diguanylate cyclase, GGDEF domain NH62_20865 PF03707 Bacterial signalling protein N terminal repeat NH62_20867 PF00990 Diguanylate cyclase, GGDEF domain NH62_20867 PF17158 Membrane-associated sensor, integral membrane domain NH62_20868 PF00012 Hsp70 protein NH62_20869 PF00012 Hsp70 protein NH62_20871 PF00990 Diguanylate cyclase, GGDEF domain NH62_20871 PF03707 Bacterial signalling protein N terminal repeat NH62_20871 PF00563 EAL domain NH62_20876 PF00271 Helicase conserved C-terminal domain NH62_20876 PF00270 DEAD/DEAH box helicase NH62_20876 PF11898 Domain of unknown function (DUF3418) NH62_20876 PF04408 Helicase associated domain (HA2) NH62_20876 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NH62_20878 PF00012 Hsp70 protein NH62_20879 PF10437 Bacterial lipoate protein ligase C-terminus NH62_20879 PF03099 Biotin/lipoate A/B protein ligase family NH62_20880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_20880 PF03466 LysR substrate binding domain NH62_20881 PF07690 Major Facilitator Superfamily NH62_20882 PF00875 DNA photolyase NH62_20882 PF03441 FAD binding domain of DNA photolyase NH62_20883 PF00893 Small Multidrug Resistance protein NH62_20884 PF00672 HAMP domain NH62_20884 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20887 PF02895 Signal transducing histidine kinase, homodimeric domain NH62_20887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20887 PF07194 P2 response regulator binding domain NH62_20887 PF01627 Hpt domain NH62_20887 PF01584 CheW-like domain NH62_20888 PF01584 CheW-like domain NH62_20888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20888 PF01627 Hpt domain NH62_20888 PF00072 Response regulator receiver domain NH62_20889 PF03705 CheR methyltransferase, all-alpha domain NH62_20889 PF01739 CheR methyltransferase, SAM binding domain NH62_20891 PF01339 CheB methylesterase NH62_20891 PF00072 Response regulator receiver domain NH62_20892 PF01584 CheW-like domain NH62_20893 PF17202 Single cache domain 3 NH62_20893 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20893 PF00672 HAMP domain NH62_20894 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20894 PF00672 HAMP domain NH62_20894 PF12729 Four helix bundle sensory module for signal transduction NH62_20895 PF13426 PAS domain NH62_20895 PF08447 PAS fold NH62_20895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20896 PF00270 DEAD/DEAH box helicase NH62_20896 PF00271 Helicase conserved C-terminal domain NH62_20898 PF02321 Outer membrane efflux protein NH62_20899 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_20899 PF00529 HlyD membrane-fusion protein of T1SS NH62_20900 PF07690 Major Facilitator Superfamily NH62_20901 PF00672 HAMP domain NH62_20901 PF02743 Cache domain NH62_20901 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20902 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NH62_20903 PF05638 Type VI secretion system effector, Hcp NH62_20904 PF16671 Actin cross-linking domain NH62_20904 PF04717 Type VI secretion system, phage-baseplate injector NH62_20908 PF01810 LysE type translocator NH62_20909 PF01235 Sodium:alanine symporter family NH62_20912 PF13416 Bacterial extracellular solute-binding protein NH62_20913 PF13416 Bacterial extracellular solute-binding protein NH62_20914 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20915 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20916 PF00005 ABC transporter NH62_20916 PF08402 TOBE domain NH62_20920 PF01171 PP-loop family NH62_20921 PF00582 Universal stress protein family NH62_20922 PF13545 Crp-like helix-turn-helix domain NH62_20922 PF00027 Cyclic nucleotide-binding domain NH62_20925 PF00403 Heavy-metal-associated domain NH62_20927 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NH62_20927 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NH62_20930 PF00115 Cytochrome C and Quinol oxidase polypeptide I NH62_20933 PF00072 Response regulator receiver domain NH62_20933 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20933 PF00512 His Kinase A (phospho-acceptor) domain NH62_20933 PF09308 LuxQ, periplasmic NH62_20934 PF03412 Peptidase C39 family NH62_20934 PF00005 ABC transporter NH62_20934 PF00664 ABC transporter transmembrane region NH62_20936 PF00664 ABC transporter transmembrane region NH62_20936 PF00005 ABC transporter NH62_20936 PF03412 Peptidase C39 family NH62_20938 PF02794 RTX toxin acyltransferase family NH62_20939 PF16671 Actin cross-linking domain NH62_20939 PF07634 RtxA repeat NH62_20939 PF12146 Serine aminopeptidase, S33 NH62_20939 PF11713 Peptidase C80 family NH62_20939 PF11647 Membrane Localization Domain NH62_20942 PF17414 MatP C-terminal ribbon-helix-helix domain NH62_20942 PF06303 MatP N-terminal domain NH62_20943 PF13654 AAA domain NH62_20943 PF05362 Lon protease (S16) C-terminal proteolytic domain NH62_20944 PF07977 FabA-like domain NH62_20945 PF04957 Ribosome modulation factor NH62_20949 PF10672 S-adenosylmethionine-dependent methyltransferase NH62_20949 PF02926 THUMP domain NH62_20949 PF01170 Putative RNA methylase family UPF0020 NH62_20951 PF07126 Cell-division protein ZapC NH62_20952 PF01180 Dihydroorotate dehydrogenase NH62_20953 PF05088 Bacterial NAD-glutamate dehydrogenase NH62_20954 PF11940 Domain of unknown function (DUF3458) Ig-like fold NH62_20954 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NH62_20954 PF01433 Peptidase family M1 domain NH62_20956 PF03572 Peptidase family S41 NH62_20956 PF17804 Tail specific protease N-terminal domain NH62_20956 PF00595 PDZ domain NH62_20956 PF11818 C-terminal domain of tail specific protease (DUF3340) NH62_20957 PF17516 ProQ C-terminal domain NH62_20957 PF04352 ProQ/FINO family NH62_20958 PF13185 GAF domain NH62_20959 PF00005 ABC transporter NH62_20959 PF00664 ABC transporter transmembrane region NH62_20960 PF04403 Paraquat-inducible protein A NH62_20961 PF02470 MlaD protein NH62_20962 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NH62_20962 PF01189 16S rRNA methyltransferase RsmB/F NH62_20962 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NH62_20963 PF17783 CvfB-like winged helix domain NH62_20963 PF13509 S1 domain NH62_20966 PF00793 DAHP synthetase I family NH62_20967 PF04461 Protein of unknown function (DUF520) NH62_20968 PF02146 Sir2 family NH62_20971 PF13247 4Fe-4S dicluster domain NH62_20972 PF01568 Molydopterin dinucleotide binding domain NH62_20972 PF00384 Molybdopterin oxidoreductase NH62_20972 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NH62_20974 PF02613 Nitrate reductase delta subunit NH62_20978 PF02634 FdhD/NarQ family NH62_20980 PF00005 ABC transporter NH62_20980 PF12848 ABC transporter NH62_20981 PF00512 His Kinase A (phospho-acceptor) domain NH62_20981 PF00989 PAS fold NH62_20981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_20982 PF00072 Response regulator receiver domain NH62_20982 PF02954 Bacterial regulatory protein, Fis family NH62_20982 PF00158 Sigma-54 interaction domain NH62_20983 PF12849 PBP superfamily domain NH62_20984 PF00528 Binding-protein-dependent transport system inner membrane component NH62_20985 PF08402 TOBE domain NH62_20985 PF00005 ABC transporter NH62_20986 PF12804 MobA-like NTP transferase domain NH62_20987 PF03453 MoeA N-terminal region (domain I and II) NH62_20987 PF00994 Probable molybdopterin binding domain NH62_20987 PF03454 MoeA C-terminal region (domain IV) NH62_20989 PF00480 ROK family NH62_20992 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_20992 PF00672 HAMP domain NH62_20992 PF02743 Cache domain NH62_20993 PF00877 NlpC/P60 family NH62_20997 PF01554 MatE NH62_20999 PF14743 DNA ligase OB-like domain NH62_20999 PF01068 ATP dependent DNA ligase domain NH62_21002 PF02472 Biopolymer transport protein ExbD/TolR NH62_21003 PF01618 MotA/TolQ/ExbB proton channel family NH62_21004 PF01618 MotA/TolQ/ExbB proton channel family NH62_21006 PF13416 Bacterial extracellular solute-binding protein NH62_21007 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21008 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21009 PF00005 ABC transporter NH62_21009 PF17912 MalK OB fold domain NH62_21010 PF00455 DeoR C terminal sensor domain NH62_21010 PF08220 DeoR-like helix-turn-helix domain NH62_21011 PF03009 Glycerophosphoryl diester phosphodiesterase family NH62_21012 PF04074 YhcH/YjgK/YiaL NH62_21013 PF01042 Endoribonuclease L-PSP NH62_21014 PF00356 Bacterial regulatory proteins, lacI family NH62_21015 PF00232 Glycosyl hydrolase family 1 NH62_21016 PF00141 Peroxidase NH62_21017 PF03466 LysR substrate binding domain NH62_21017 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21019 PF00529 HlyD membrane-fusion protein of T1SS NH62_21021 PF00005 ABC transporter NH62_21021 PF12704 MacB-like periplasmic core domain NH62_21021 PF02687 FtsX-like permease family NH62_21022 PF12704 MacB-like periplasmic core domain NH62_21022 PF02687 FtsX-like permease family NH62_21022 PF00005 ABC transporter NH62_21023 PF12704 MacB-like periplasmic core domain NH62_21023 PF00005 ABC transporter NH62_21023 PF02687 FtsX-like permease family NH62_21024 PF02322 Cytochrome bd terminal oxidase subunit II NH62_21025 PF01654 Cytochrome bd terminal oxidase subunit I NH62_21027 PF00206 Lyase NH62_21027 PF10415 Fumarase C C-terminus NH62_21033 PF00501 AMP-binding enzyme NH62_21033 PF13193 AMP-binding enzyme C-terminal domain NH62_21034 PF03466 LysR substrate binding domain NH62_21034 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21035 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NH62_21036 PF00080 Copper/zinc superoxide dismutase (SODC) NH62_21038 PF00199 Catalase NH62_21038 PF06628 Catalase-related immune-responsive NH62_21040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21040 PF03466 LysR substrate binding domain NH62_21041 PF03306 Alpha-acetolactate decarboxylase NH62_21042 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH62_21042 PF00205 Thiamine pyrophosphate enzyme, central domain NH62_21042 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH62_21044 PF00672 HAMP domain NH62_21044 PF00563 EAL domain NH62_21044 PF00990 Diguanylate cyclase, GGDEF domain NH62_21044 PF17154 Gammaproteobacterial periplasmic sensor domain NH62_21045 PF00990 Diguanylate cyclase, GGDEF domain NH62_21046 PF01263 Aldose 1-epimerase NH62_21047 PF01263 Aldose 1-epimerase NH62_21048 PF08544 GHMP kinases C terminal NH62_21048 PF00288 GHMP kinases N terminal domain NH62_21048 PF10509 Galactokinase galactose-binding signature NH62_21049 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NH62_21049 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NH62_21050 PF07690 Major Facilitator Superfamily NH62_21054 PF00990 Diguanylate cyclase, GGDEF domain NH62_21054 PF00072 Response regulator receiver domain NH62_21057 PF00072 Response regulator receiver domain NH62_21057 PF01584 CheW-like domain NH62_21059 PF12431 Transcriptional regulator NH62_21059 PF00072 Response regulator receiver domain NH62_21060 PF00989 PAS fold NH62_21060 PF17203 Single cache domain 3 NH62_21060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NH62_21060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21063 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_21067 PF04204 Homoserine O-succinyltransferase NH62_21070 PF05971 RNA methyltransferase NH62_21071 PF01863 Protein of unknown function DUF45 NH62_21073 PF03466 LysR substrate binding domain NH62_21073 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21077 PF02321 Outer membrane efflux protein NH62_21078 PF05736 OprF membrane domain NH62_21078 PF00691 OmpA family NH62_21080 PF03435 Saccharopine dehydrogenase NADP binding domain NH62_21080 PF16653 Saccharopine dehydrogenase C-terminal domain NH62_21081 PF00202 Aminotransferase class-III NH62_21082 PF06965 Na+/H+ antiporter 1 NH62_21085 PF00005 ABC transporter NH62_21086 PF01554 MatE NH62_21087 PF13460 NAD(P)H-binding NH62_21087 PF11066 Protein of unknown function (DUF2867) NH62_21089 PF07690 Major Facilitator Superfamily NH62_21090 PF01479 S4 domain NH62_21090 PF00849 RNA pseudouridylate synthase NH62_21091 PF00271 Helicase conserved C-terminal domain NH62_21091 PF04851 Type III restriction enzyme, res subunit NH62_21093 PF00072 Response regulator receiver domain NH62_21093 PF00486 Transcriptional regulatory protein, C terminal NH62_21094 PF00512 His Kinase A (phospho-acceptor) domain NH62_21094 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21094 PF11808 Phosphate regulon sensor protein PhoR NH62_21094 PF00989 PAS fold NH62_21095 PF01386 Ribosomal L25p family NH62_21096 PF00360 Phytochrome region NH62_21096 PF00990 Diguanylate cyclase, GGDEF domain NH62_21096 PF00563 EAL domain NH62_21096 PF01590 GAF domain NH62_21098 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21098 PF12729 Four helix bundle sensory module for signal transduction NH62_21098 PF00672 HAMP domain NH62_21102 PF12793 Sugar transport-related sRNA regulator N-term NH62_21102 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_21104 PF01752 Collagenase NH62_21104 PF08453 Peptidase family M9 N-terminal NH62_21104 PF04151 Bacterial pre-peptidase C-terminal domain NH62_21106 PF00563 EAL domain NH62_21106 PF03707 Bacterial signalling protein N terminal repeat NH62_21106 PF00990 Diguanylate cyclase, GGDEF domain NH62_21107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21107 PF09308 LuxQ, periplasmic NH62_21107 PF00072 Response regulator receiver domain NH62_21107 PF00512 His Kinase A (phospho-acceptor) domain NH62_21108 PF00571 CBS domain NH62_21108 PF03448 MgtE intracellular N domain NH62_21108 PF01769 Divalent cation transporter NH62_21110 PF03222 Tryptophan/tyrosine permease family NH62_21111 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_21112 PF00005 ABC transporter NH62_21115 PF06945 Protein of unknown function (DUF1289) NH62_21117 PF13416 Bacterial extracellular solute-binding protein NH62_21118 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21119 PF00005 ABC transporter NH62_21120 PF01066 CDP-alcohol phosphatidyltransferase NH62_21121 PF00849 RNA pseudouridylate synthase NH62_21122 PF00209 Sodium:neurotransmitter symporter family NH62_21123 PF13396 Phospholipase_D-nuclease N-terminal NH62_21123 PF13091 PLD-like domain NH62_21124 PF13396 Phospholipase_D-nuclease N-terminal NH62_21124 PF13091 PLD-like domain NH62_21125 PF01053 Cys/Met metabolism PLP-dependent enzyme NH62_21126 PF03352 Methyladenine glycosylase NH62_21127 PF00873 AcrB/AcrD/AcrF family NH62_21128 PF13533 Biotin-lipoyl like NH62_21129 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_21129 PF00529 HlyD membrane-fusion protein of T1SS NH62_21132 PF04012 PspA/IM30 family NH62_21133 PF00158 Sigma-54 interaction domain NH62_21133 PF02954 Bacterial regulatory protein, Fis family NH62_21134 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_21135 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21136 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21136 PF12911 N-terminal TM domain of oligopeptide transport permease C NH62_21137 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_21137 PF00005 ABC transporter NH62_21138 PF00005 ABC transporter NH62_21141 PF02833 DHHA2 domain NH62_21141 PF01368 DHH family NH62_21145 PF00384 Molybdopterin oxidoreductase NH62_21145 PF01568 Molydopterin dinucleotide binding domain NH62_21145 PF18364 Molybdopterin oxidoreductase N-terminal domain NH62_21146 PF03264 NapC/NirT cytochrome c family, N-terminal region NH62_21147 PF06796 Periplasmic nitrate reductase protein NapE NH62_21148 PF01226 Formate/nitrite transporter NH62_21150 PF01370 NAD dependent epimerase/dehydratase family NH62_21151 PF02698 DUF218 domain NH62_21153 PF04279 Intracellular septation protein A NH62_21154 PF03061 Thioesterase superfamily NH62_21155 PF03795 YCII-related domain NH62_21157 PF08267 Cobalamin-independent synthase, N-terminal domain NH62_21157 PF01717 Cobalamin-independent synthase, Catalytic domain NH62_21158 PF03466 LysR substrate binding domain NH62_21158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21161 PF05193 Peptidase M16 inactive domain NH62_21161 PF00675 Insulinase (Peptidase family M16) NH62_21162 PF08448 PAS fold NH62_21162 PF08447 PAS fold NH62_21162 PF00990 Diguanylate cyclase, GGDEF domain NH62_21162 PF00563 EAL domain NH62_21163 PF08497 Radical SAM N-terminal NH62_21163 PF04055 Radical SAM superfamily NH62_21163 PF11842 Domain of unknown function (DUF3362) NH62_21164 PF01810 LysE type translocator NH62_21165 PF01037 Lrp/AsnC ligand binding domain NH62_21166 PF04310 MukB N-terminal NH62_21166 PF16330 MukB hinge domain NH62_21167 PF04288 MukE-like family NH62_21168 PF03882 MukF winged-helix domain NH62_21168 PF17193 MukF C-terminal domain NH62_21168 PF17192 MukF middle domain NH62_21170 PF02698 DUF218 domain NH62_21171 PF00486 Transcriptional regulatory protein, C terminal NH62_21171 PF00072 Response regulator receiver domain NH62_21172 PF02613 Nitrate reductase delta subunit NH62_21173 PF00356 Bacterial regulatory proteins, lacI family NH62_21174 PF04994 TfoX C-terminal domain NH62_21174 PF04993 TfoX N-terminal domain NH62_21178 PF00534 Glycosyl transferases group 1 NH62_21178 PF08323 Starch synthase catalytic domain NH62_21179 PF00483 Nucleotidyl transferase NH62_21180 PF01131 DNA topoisomerase NH62_21180 PF08272 Topoisomerase I zinc-ribbon-like NH62_21180 PF01751 Toprim domain NH62_21180 PF01396 Topoisomerase DNA binding C4 zinc finger NH62_21181 PF10692 Protein of unknown function (DUF2498) NH62_21182 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NH62_21183 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NH62_21184 PF04377 Arginine-tRNA-protein transferase, C terminus NH62_21184 PF04376 Arginine-tRNA-protein transferase, N terminus NH62_21185 PF01176 Translation initiation factor 1A / IF-1 NH62_21186 PF12241 Trans-2-enoyl-CoA reductase catalytic region NH62_21186 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NH62_21186 PF07055 Enoyl reductase FAD binding domain NH62_21187 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH62_21187 PF09317 Domain of unknown function (DUF1974) NH62_21187 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH62_21187 PF02770 Acyl-CoA dehydrogenase, middle domain NH62_21188 PF16295 Tetracyclin repressor-like, C-terminal domain NH62_21188 PF00440 Bacterial regulatory proteins, tetR family NH62_21190 PF07383 Protein of unknown function (DUF1496) NH62_21191 PF00171 Aldehyde dehydrogenase family NH62_21192 PF08362 YcdC-like protein, C-terminal region NH62_21192 PF00440 Bacterial regulatory proteins, tetR family NH62_21196 PF00924 Mechanosensitive ion channel NH62_21196 PF05552 Conserved TM helix NH62_21197 PF04403 Paraquat-inducible protein A NH62_21198 PF02470 MlaD protein NH62_21200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_21201 PF00873 AcrB/AcrD/AcrF family NH62_21203 PF13356 Arm DNA-binding domain NH62_21203 PF00589 Phage integrase family NH62_21204 PF13356 Arm DNA-binding domain NH62_21204 PF00589 Phage integrase family NH62_21205 PF12419 SNF2 Helicase protein NH62_21205 PF00176 SNF2 family N-terminal domain NH62_21205 PF00271 Helicase conserved C-terminal domain NH62_21206 PF01527 Transposase NH62_21207 PF00665 Integrase core domain NH62_21211 PF03441 FAD binding domain of DNA photolyase NH62_21211 PF00875 DNA photolyase NH62_21213 PF09905 DNA-binding protein VF530 NH62_21214 PF01590 GAF domain NH62_21214 PF02954 Bacterial regulatory protein, Fis family NH62_21214 PF00158 Sigma-54 interaction domain NH62_21215 PF00171 Aldehyde dehydrogenase family NH62_21219 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH62_21221 PF12833 Helix-turn-helix domain NH62_21222 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH62_21222 PF02378 Phosphotransferase system, EIIC NH62_21222 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NH62_21223 PF01238 Phosphomannose isomerase type I NH62_21224 PF06610 L-alanine exporter NH62_21225 PF00512 His Kinase A (phospho-acceptor) domain NH62_21225 PF09308 LuxQ, periplasmic NH62_21225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21225 PF00072 Response regulator receiver domain NH62_21227 PF02445 Quinolinate synthetase A protein NH62_21229 PF00691 OmpA family NH62_21230 PF04052 TolB amino-terminal domain NH62_21230 PF07676 WD40-like Beta Propeller Repeat NH62_21232 PF02472 Biopolymer transport protein ExbD/TolR NH62_21233 PF01618 MotA/TolQ/ExbB proton channel family NH62_21234 PF03061 Thioesterase superfamily NH62_21235 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) NH62_21236 PF08173 Membrane bound YbgT-like protein NH62_21237 PF02322 Cytochrome bd terminal oxidase subunit II NH62_21238 PF01654 Cytochrome bd terminal oxidase subunit I NH62_21240 PF05491 RuvB C-terminal winged helix domain NH62_21240 PF05496 Holliday junction DNA helicase RuvB P-loop domain NH62_21240 PF17864 RuvB AAA lid domain NH62_21241 PF01330 RuvA N terminal domain NH62_21241 PF07499 RuvA, C-terminal domain NH62_21242 PF02075 Crossover junction endodeoxyribonuclease RuvC NH62_21243 PF01406 tRNA synthetases class I (C) catalytic domain NH62_21243 PF09190 DALR domain NH62_21244 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NH62_21245 PF00149 Calcineurin-like phosphoesterase NH62_21246 PF00563 EAL domain NH62_21246 PF08668 HDOD domain NH62_21247 PF02810 SEC-C motif NH62_21248 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NH62_21249 PF13609 Gram-negative porin NH62_21250 PF06733 DEAD_2 NH62_21250 PF13307 Helicase C-terminal domain NH62_21251 PF01925 Sulfite exporter TauE/SafE NH62_21252 PF07445 Primosomal replication protein priC NH62_21253 PF10689 Protein of unknown function (DUF2496) NH62_21254 PF00672 HAMP domain NH62_21254 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21255 PF03372 Endonuclease/Exonuclease/phosphatase family NH62_21256 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21257 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21258 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_21259 PF00005 ABC transporter NH62_21262 PF02901 Pyruvate formate lyase-like NH62_21262 PF01228 Glycine radical NH62_21264 PF00672 HAMP domain NH62_21264 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21264 PF12729 Four helix bundle sensory module for signal transduction NH62_21265 PF04055 Radical SAM superfamily NH62_21267 PF03887 YfbU domain NH62_21268 PF06798 PrkA serine protein kinase C-terminal domain NH62_21268 PF08298 PrkA AAA domain NH62_21269 PF04285 Protein of unknown function (DUF444) NH62_21270 PF04293 SpoVR like protein NH62_21271 PF02348 Cytidylyltransferase NH62_21272 PF03966 Trm112p-like protein NH62_21273 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NH62_21274 PF00005 ABC transporter NH62_21274 PF00664 ABC transporter transmembrane region NH62_21275 PF03772 Competence protein NH62_21275 PF00753 Metallo-beta-lactamase superfamily NH62_21275 PF13567 Domain of unknown function (DUF4131) NH62_21277 PF12704 MacB-like periplasmic core domain NH62_21277 PF02687 FtsX-like permease family NH62_21278 PF00005 ABC transporter NH62_21279 PF02687 FtsX-like permease family NH62_21279 PF12704 MacB-like periplasmic core domain NH62_21281 PF00270 DEAD/DEAH box helicase NH62_21281 PF03461 TRCF domain NH62_21281 PF17757 UvrB interaction domain NH62_21281 PF00271 Helicase conserved C-terminal domain NH62_21281 PF02559 CarD-like/TRCF domain NH62_21283 PF07968 Leukocidin/Hemolysin toxin family NH62_21283 PF12563 Hemolytic toxin N terminal NH62_21283 PF16458 Beta-prism lectin NH62_21285 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_21286 PF05728 Uncharacterised protein family (UPF0227) NH62_21288 PF13036 Peptidoglycan-synthase activator LpoB NH62_21288 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NH62_21291 PF01230 HIT domain NH62_21293 PF00672 HAMP domain NH62_21293 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21295 PF00392 Bacterial regulatory proteins, gntR family NH62_21295 PF07840 FadR C-terminal domain NH62_21296 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NH62_21297 PF02600 Disulfide bond formation protein DsbB NH62_21298 PF09397 Ftsk gamma domain NH62_21298 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NH62_21298 PF17854 FtsK alpha domain NH62_21298 PF01580 FtsK/SpoIIIE family NH62_21299 PF01037 Lrp/AsnC ligand binding domain NH62_21300 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NH62_21300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NH62_21302 PF03466 LysR substrate binding domain NH62_21302 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21304 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NH62_21305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NH62_21306 PF18073 Rubredoxin metal binding domain NH62_21307 PF06305 Lipopolysaccharide assembly protein A domain NH62_21308 PF00216 Bacterial DNA-binding protein NH62_21309 PF00575 S1 RNA binding domain NH62_21310 PF02224 Cytidylate kinase NH62_21312 PF13145 PPIC-type PPIASE domain NH62_21313 PF00216 Bacterial DNA-binding protein NH62_21314 PF00004 ATPase family associated with various cellular activities (AAA) NH62_21314 PF05362 Lon protease (S16) C-terminal proteolytic domain NH62_21314 PF02190 ATP-dependent protease La (LON) substrate-binding domain NH62_21315 PF07724 AAA domain (Cdc48 subfamily) NH62_21315 PF06689 ClpX C4-type zinc finger NH62_21315 PF10431 C-terminal, D2-small domain, of ClpB protein NH62_21316 PF00574 Clp protease NH62_21317 PF05698 Bacterial trigger factor protein (TF) C-terminus NH62_21317 PF05697 Bacterial trigger factor protein (TF) NH62_21317 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_21318 PF05697 Bacterial trigger factor protein (TF) NH62_21318 PF05698 Bacterial trigger factor protein (TF) C-terminus NH62_21318 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_21319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21319 PF00512 His Kinase A (phospho-acceptor) domain NH62_21320 PF02954 Bacterial regulatory protein, Fis family NH62_21320 PF00072 Response regulator receiver domain NH62_21320 PF00158 Sigma-54 interaction domain NH62_21321 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NH62_21322 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NH62_21323 PF03480 Bacterial extracellular solute-binding protein, family 7 NH62_21324 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NH62_21327 PF03707 Bacterial signalling protein N terminal repeat NH62_21327 PF00990 Diguanylate cyclase, GGDEF domain NH62_21327 PF13188 PAS domain NH62_21327 PF00563 EAL domain NH62_21336 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NH62_21336 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NH62_21337 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NH62_21338 PF01494 FAD binding domain NH62_21339 PF03466 LysR substrate binding domain NH62_21339 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21341 PF00384 Molybdopterin oxidoreductase NH62_21341 PF01568 Molydopterin dinucleotide binding domain NH62_21341 PF18364 Molybdopterin oxidoreductase N-terminal domain NH62_21342 PF03264 NapC/NirT cytochrome c family, N-terminal region NH62_21343 PF00704 Glycosyl hydrolases family 18 NH62_21344 PF07662 Na+ dependent nucleoside transporter C-terminus NH62_21344 PF01773 Na+ dependent nucleoside transporter N-terminus NH62_21344 PF07670 Nucleoside recognition NH62_21345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21345 PF03466 LysR substrate binding domain NH62_21346 PF13406 Transglycosylase SLT domain NH62_21347 PF05166 YcgL domain NH62_21348 PF05209 Septum formation inhibitor MinC, N-terminal domain NH62_21348 PF03775 Septum formation inhibitor MinC, C-terminal domain NH62_21349 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NH62_21350 PF03776 Septum formation topological specificity factor MinE NH62_21351 PF04170 NlpE N-terminal domain NH62_21357 PF07690 Major Facilitator Superfamily NH62_21358 PF12729 Four helix bundle sensory module for signal transduction NH62_21358 PF00672 HAMP domain NH62_21358 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21359 PF01381 Helix-turn-helix NH62_21359 PF07883 Cupin domain NH62_21360 PF03594 Benzoate membrane transport protein NH62_21361 PF13193 AMP-binding enzyme C-terminal domain NH62_21361 PF00501 AMP-binding enzyme NH62_21362 PF13378 Enolase C-terminal domain-like NH62_21363 PF00378 Enoyl-CoA hydratase/isomerase NH62_21364 PF12697 Alpha/beta hydrolase family NH62_21365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH62_21365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH62_21365 PF16582 Middle domain of thiamine pyrophosphate NH62_21366 PF00425 chorismate binding enzyme NH62_21367 PF00155 Aminotransferase class I and II NH62_21369 PF13286 Phosphohydrolase-associated domain NH62_21369 PF01966 HD domain NH62_21373 PF01612 3'-5' exonuclease NH62_21373 PF00570 HRDC domain NH62_21374 PF00501 AMP-binding enzyme NH62_21374 PF13193 AMP-binding enzyme C-terminal domain NH62_21375 PF00561 alpha/beta hydrolase fold NH62_21378 PF00814 Glycoprotease family NH62_21379 PF04851 Type III restriction enzyme, res subunit NH62_21379 PF13307 Helicase C-terminal domain NH62_21381 PF01842 ACT domain NH62_21381 PF00551 Formyl transferase NH62_21382 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NH62_21382 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_21383 PF01343 Peptidase family S49 NH62_21384 PF17763 Glutaminase/Asparaginase C-terminal domain NH62_21384 PF00710 Asparaginase, N-terminal NH62_21385 PF07023 Protein of unknown function (DUF1315) NH62_21387 PF01641 SelR domain NH62_21388 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NH62_21388 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH62_21389 PF01263 Aldose 1-epimerase NH62_21391 PF13847 Methyltransferase domain NH62_21394 PF00072 Response regulator receiver domain NH62_21394 PF01584 CheW-like domain NH62_21395 PF00480 ROK family NH62_21396 PF00224 Pyruvate kinase, barrel domain NH62_21396 PF02887 Pyruvate kinase, alpha/beta domain NH62_21397 PF01734 Patatin-like phospholipase NH62_21400 PF00209 Sodium:neurotransmitter symporter family NH62_21402 PF00367 phosphotransferase system, EIIB NH62_21402 PF02378 Phosphotransferase system, EIIC NH62_21403 PF01026 TatD related DNase NH62_21404 PF09115 DNA polymerase III, delta subunit, C terminal NH62_21405 PF02223 Thymidylate kinase NH62_21406 PF02618 YceG-like family NH62_21407 PF01063 Amino-transferase class IV NH62_21408 PF00109 Beta-ketoacyl synthase, N-terminal domain NH62_21408 PF02801 Beta-ketoacyl synthase, C-terminal domain NH62_21409 PF00550 Phosphopantetheine attachment site NH62_21411 PF00698 Acyl transferase domain NH62_21412 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NH62_21412 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NH62_21413 PF02504 Fatty acid synthesis protein NH62_21414 PF02504 Fatty acid synthesis protein NH62_21415 PF01783 Ribosomal L32p protein family NH62_21416 PF02620 Large ribosomal RNA subunit accumulation protein YceD NH62_21417 PF02545 Maf-like protein NH62_21418 PF00849 RNA pseudouridylate synthase NH62_21418 PF01479 S4 domain NH62_21419 PF10150 Ribonuclease E/G family NH62_21419 PF00575 S1 RNA binding domain NH62_21419 PF12111 Polyribonucleotide phosphorylase C terminal NH62_21420 PF01740 STAS domain NH62_21420 PF00916 Sulfate permease family NH62_21422 PF00171 Aldehyde dehydrogenase family NH62_21422 PF00465 Iron-containing alcohol dehydrogenase NH62_21423 PF01914 MarC family integral membrane protein NH62_21424 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH62_21424 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH62_21425 PF03553 Na+/H+ antiporter family NH62_21427 PF04245 37-kD nucleoid-associated bacterial protein NH62_21428 PF07208 Protein of unknown function (DUF1414) NH62_21429 PF11893 Domain of unknown function (DUF3413) NH62_21429 PF00884 Sulfatase NH62_21436 PF12961 Domain of unknown function (DUF3850) NH62_21444 PF02899 Phage integrase, N-terminal SAM-like domain NH62_21444 PF00589 Phage integrase family NH62_21446 PF10548 P22AR C-terminal domain NH62_21446 PF02498 BRO family, N-terminal domain NH62_21472 PF01609 Transposase DDE domain NH62_21472 PF05598 Transposase domain (DUF772) NH62_21480 PF00166 Chaperonin 10 Kd subunit NH62_21481 PF02899 Phage integrase, N-terminal SAM-like domain NH62_21481 PF00589 Phage integrase family NH62_21485 PF00850 Histone deacetylase domain NH62_21486 PF01131 DNA topoisomerase NH62_21486 PF01751 Toprim domain NH62_21487 PF00462 Glutaredoxin NH62_21488 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NH62_21488 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NH62_21491 PF04333 MlaA lipoprotein NH62_21493 PF03918 Cytochrome C biogenesis protein NH62_21494 PF08534 Redoxin NH62_21495 PF01578 Cytochrome C assembly protein NH62_21495 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NH62_21496 PF03100 CcmE NH62_21497 PF04995 Heme exporter protein D (CcmD) NH62_21498 PF01578 Cytochrome C assembly protein NH62_21499 PF03379 CcmB protein NH62_21500 PF00005 ABC transporter NH62_21502 PF01584 CheW-like domain NH62_21504 PF13614 AAA domain NH62_21505 PF00072 Response regulator receiver domain NH62_21505 PF01339 CheB methylesterase NH62_21506 PF01627 Hpt domain NH62_21506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21506 PF07194 P2 response regulator binding domain NH62_21506 PF01584 CheW-like domain NH62_21506 PF02895 Signal transducing histidine kinase, homodimeric domain NH62_21507 PF04344 Chemotaxis phosphatase, CheZ NH62_21508 PF00072 Response regulator receiver domain NH62_21509 PF04545 Sigma-70, region 4 NH62_21509 PF04539 Sigma-70 region 3 NH62_21509 PF04542 Sigma-70 region 2 NH62_21510 PF10609 NUBPL iron-transfer P-loop NTPase NH62_21511 PF00448 SRP54-type protein, GTPase domain NH62_21512 PF00771 FHIPEP family NH62_21513 PF00300 Histidine phosphatase superfamily (branch 1) NH62_21514 PF00675 Insulinase (Peptidase family M16) NH62_21514 PF05193 Peptidase M16 inactive domain NH62_21516 PF03485 Arginyl tRNA synthetase N terminal domain NH62_21516 PF05746 DALR anticodon binding domain NH62_21516 PF00750 tRNA synthetases class I (R) NH62_21519 PF02421 Ferrous iron transport protein B NH62_21519 PF07664 Ferrous iron transport protein B C terminus NH62_21519 PF07670 Nucleoside recognition NH62_21520 PF04023 FeoA domain NH62_21521 PF02311 AraC-like ligand binding domain NH62_21521 PF12833 Helix-turn-helix domain NH62_21522 PF01297 Zinc-uptake complex component A periplasmic NH62_21523 PF00005 ABC transporter NH62_21524 PF00950 ABC 3 transport family NH62_21525 PF00549 CoA-ligase NH62_21525 PF02629 CoA binding domain NH62_21526 PF08442 ATP-grasp domain NH62_21526 PF00549 CoA-ligase NH62_21527 PF08442 ATP-grasp domain NH62_21527 PF00549 CoA-ligase NH62_21528 PF00364 Biotin-requiring enzyme NH62_21528 PF02817 e3 binding domain NH62_21528 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NH62_21529 PF16078 2-oxoglutarate dehydrogenase N-terminus NH62_21529 PF00676 Dehydrogenase E1 component NH62_21529 PF02779 Transketolase, pyrimidine binding domain NH62_21529 PF16870 2-oxoglutarate dehydrogenase C-terminal NH62_21530 PF13085 2Fe-2S iron-sulfur cluster binding domain NH62_21531 PF00890 FAD binding domain NH62_21531 PF02910 Fumarate reductase flavoprotein C-term NH62_21532 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NH62_21533 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NH62_21534 PF00285 Citrate synthase, C-terminal domain NH62_21535 PF01784 NIF3 (NGG1p interacting factor 3) NH62_21537 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH62_21537 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH62_21537 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH62_21537 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH62_21538 PF17206 SeqA protein N-terminal domain NH62_21538 PF03925 SeqA protein C-terminal domain NH62_21539 PF12697 Alpha/beta hydrolase family NH62_21541 PF00258 Flavodoxin NH62_21542 PF04172 LrgB-like family NH62_21543 PF03788 LrgA family NH62_21544 PF03466 LysR substrate binding domain NH62_21544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21545 PF03466 LysR substrate binding domain NH62_21547 PF01475 Ferric uptake regulator family NH62_21548 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH62_21548 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH62_21549 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH62_21549 PF11890 Domain of unknown function (DUF3410) NH62_21549 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH62_21550 PF00109 Beta-ketoacyl synthase, N-terminal domain NH62_21550 PF02801 Beta-ketoacyl synthase, C-terminal domain NH62_21551 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NH62_21551 PF01266 FAD dependent oxidoreductase NH62_21552 PF03358 NADPH-dependent FMN reductase NH62_21553 PF08891 YfcL protein NH62_21554 PF04315 Elongation factor P hydroxylase NH62_21555 PF03458 UPF0126 domain NH62_21556 PF01264 Chorismate synthase NH62_21557 PF05175 Methyltransferase small domain NH62_21558 PF01713 Smr domain NH62_21559 PF01312 FlhB HrpN YscU SpaS Family NH62_21560 PF01311 Bacterial export proteins, family 1 NH62_21561 PF01313 Bacterial export proteins, family 3 NH62_21562 PF00813 FliP family NH62_21563 PF04347 Flagellar biosynthesis protein, FliO NH62_21564 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NH62_21565 PF02154 Flagellar motor switch protein FliM NH62_21565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NH62_21566 PF03748 Flagellar basal body-associated protein FliL NH62_21569 PF18269 T3SS EscN ATPase C-terminal domain NH62_21569 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH62_21570 PF02108 Flagellar assembly protein FliH NH62_21571 PF01706 FliG C-terminal domain NH62_21571 PF14841 FliG middle domain NH62_21571 PF14842 FliG N-terminal domain NH62_21572 PF01514 Secretory protein of YscJ/FliF family NH62_21572 PF08345 Flagellar M-ring protein C-terminal NH62_21573 PF02049 Flagellar hook-basal body complex protein FliE NH62_21574 PF00158 Sigma-54 interaction domain NH62_21574 PF02954 Bacterial regulatory protein, Fis family NH62_21574 PF00072 Response regulator receiver domain NH62_21575 PF13493 Domain of unknown function (DUF4118) NH62_21575 PF13426 PAS domain NH62_21575 PF08447 PAS fold NH62_21575 PF00512 His Kinase A (phospho-acceptor) domain NH62_21575 PF00989 PAS fold NH62_21575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21576 PF00158 Sigma-54 interaction domain NH62_21576 PF00072 Response regulator receiver domain NH62_21576 PF02954 Bacterial regulatory protein, Fis family NH62_21577 PF02561 Flagellar protein FliS NH62_21579 PF02465 Flagellar hook-associated protein 2 N-terminus NH62_21579 PF07195 Flagellar hook-associated protein 2 C-terminus NH62_21579 PF07196 Flagellin hook IN motif NH62_21580 PF03646 FlaG protein NH62_21581 PF07196 Flagellin hook IN motif NH62_21581 PF00669 Bacterial flagellin N-terminal helical region NH62_21581 PF00700 Bacterial flagellin C-terminal helical region NH62_21582 PF07196 Flagellin hook IN motif NH62_21582 PF00700 Bacterial flagellin C-terminal helical region NH62_21582 PF00669 Bacterial flagellin N-terminal helical region NH62_21583 PF07196 Flagellin hook IN motif NH62_21583 PF00669 Bacterial flagellin N-terminal helical region NH62_21583 PF00700 Bacterial flagellin C-terminal helical region NH62_21584 PF04261 Dyp-type peroxidase family NH62_21585 PF11143 Protein of unknown function (DUF2919) NH62_21588 PF03960 ArsC family NH62_21589 PF07687 Peptidase dimerisation domain NH62_21589 PF01546 Peptidase family M20/M25/M40 NH62_21590 PF02557 D-alanyl-D-alanine carboxypeptidase NH62_21592 PF06804 NlpB/DapX lipoprotein NH62_21593 PF00701 Dihydrodipicolinate synthetase family NH62_21595 PF00578 AhpC/TSA family NH62_21596 PF00672 HAMP domain NH62_21596 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21596 PF02743 Cache domain NH62_21597 PF01594 AI-2E family transporter NH62_21599 PF01435 Peptidase family M48 NH62_21599 PF13181 Tetratricopeptide repeat NH62_21600 PF03960 ArsC family NH62_21601 PF03358 NADPH-dependent FMN reductase NH62_21604 PF00860 Permease family NH62_21605 PF04073 Aminoacyl-tRNA editing domain NH62_21606 PF02872 5'-nucleotidase, C-terminal domain NH62_21606 PF00149 Calcineurin-like phosphoesterase NH62_21607 PF00793 DAHP synthetase I family NH62_21608 PF13369 Transglutaminase-like superfamily NH62_21609 PF04247 Invasion gene expression up-regulator, SirB NH62_21610 PF13847 Methyltransferase domain NH62_21610 PF17827 PrmC N-terminal domain NH62_21611 PF03462 PCRF domain NH62_21611 PF00472 RF-1 domain NH62_21612 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NH62_21612 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NH62_21612 PF01488 Shikimate / quinate 5-dehydrogenase NH62_21613 PF03550 Outer membrane lipoprotein LolB NH62_21614 PF08544 GHMP kinases C terminal NH62_21614 PF00288 GHMP kinases N terminal domain NH62_21615 PF14572 Phosphoribosyl synthetase-associated domain NH62_21615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NH62_21616 PF01195 Peptidyl-tRNA hydrolase NH62_21617 PF06071 Protein of unknown function (DUF933) NH62_21617 PF01926 50S ribosome-binding GTPase NH62_21634 PF00669 Bacterial flagellin N-terminal helical region NH62_21634 PF07196 Flagellin hook IN motif NH62_21634 PF00700 Bacterial flagellin C-terminal helical region NH62_21635 PF00669 Bacterial flagellin N-terminal helical region NH62_21635 PF07196 Flagellin hook IN motif NH62_21635 PF00700 Bacterial flagellin C-terminal helical region NH62_21637 PF07196 Flagellin hook IN motif NH62_21637 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NH62_21638 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NH62_21638 PF10135 Rod binding protein NH62_21639 PF02119 Flagellar P-ring protein NH62_21640 PF02107 Flagellar L-ring protein NH62_21641 PF00460 Flagella basal body rod protein NH62_21641 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NH62_21642 PF00460 Flagella basal body rod protein NH62_21642 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NH62_21643 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NH62_21643 PF00460 Flagella basal body rod protein NH62_21643 PF07559 Flagellar basal body protein FlaE NH62_21644 PF03963 Flagellar hook capping protein - N-terminal region NH62_21644 PF13860 FlgD Ig-like domain NH62_21644 PF13861 FlgD Tudor-like domain NH62_21645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NH62_21645 PF00460 Flagella basal body rod protein NH62_21646 PF00460 Flagella basal body rod protein NH62_21647 PF03705 CheR methyltransferase, all-alpha domain NH62_21647 PF01739 CheR methyltransferase, SAM binding domain NH62_21648 PF00072 Response regulator receiver domain NH62_21648 PF01584 CheW-like domain NH62_21655 PF00668 Condensation domain NH62_21655 PF00501 AMP-binding enzyme NH62_21655 PF00550 Phosphopantetheine attachment site NH62_21655 PF08242 Methyltransferase domain NH62_21656 PF08021 Siderophore-interacting FAD-binding domain NH62_21656 PF04954 Siderophore-interacting protein NH62_21657 PF07715 TonB-dependent Receptor Plug Domain NH62_21659 PF01389 OmpA-like transmembrane domain NH62_21659 PF00691 OmpA family NH62_21660 PF00749 tRNA synthetases class I (E and Q), catalytic domain NH62_21661 PF00403 Heavy-metal-associated domain NH62_21663 PF00728 Glycosyl hydrolase family 20, catalytic domain NH62_21663 PF02838 Glycosyl hydrolase family 20, domain 2 NH62_21663 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NH62_21663 PF03173 Putative carbohydrate binding domain NH62_21664 PF01963 TraB family NH62_21667 PF01713 Smr domain NH62_21668 PF01479 S4 domain NH62_21668 PF00849 RNA pseudouridylate synthase NH62_21669 PF08448 PAS fold NH62_21669 PF00990 Diguanylate cyclase, GGDEF domain NH62_21672 PF00586 AIR synthase related protein, N-terminal domain NH62_21672 PF02769 AIR synthase related protein, C-terminal domain NH62_21673 PF00551 Formyl transferase NH62_21674 PF13230 Glutamine amidotransferases class-II NH62_21675 PF13580 SIS domain NH62_21676 PF09317 Domain of unknown function (DUF1974) NH62_21676 PF02770 Acyl-CoA dehydrogenase, middle domain NH62_21676 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NH62_21676 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NH62_21678 PF00929 Exonuclease NH62_21679 PF00075 RNase H NH62_21680 PF08241 Methyltransferase domain NH62_21681 PF00753 Metallo-beta-lactamase superfamily NH62_21681 PF16123 Hydroxyacylglutathione hydrolase C-terminus NH62_21682 PF01476 LysM domain NH62_21682 PF01464 Transglycosylase SLT domain NH62_21683 PF05257 CHAP domain NH62_21683 PF01476 LysM domain NH62_21684 PF03372 Endonuclease/Exonuclease/phosphatase family NH62_21685 PF00543 Nitrogen regulatory protein P-II NH62_21686 PF05870 Phenolic acid decarboxylase (PAD) NH62_21687 PF00034 Cytochrome c NH62_21688 PF11734 TilS substrate C-terminal domain NH62_21688 PF09179 TilS substrate binding domain NH62_21688 PF01171 PP-loop family NH62_21689 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NH62_21690 PF14579 Helix-hairpin-helix motif NH62_21690 PF02811 PHP domain NH62_21690 PF01336 OB-fold nucleic acid binding domain NH62_21690 PF07733 Bacterial DNA polymerase III alpha NTPase domain NH62_21690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NH62_21691 PF01351 Ribonuclease HII NH62_21692 PF02684 Lipid-A-disaccharide synthetase NH62_21693 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_21693 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NH62_21694 PF07977 FabA-like domain NH62_21695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NH62_21695 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_21696 PF03938 Outer membrane protein (OmpH-like) NH62_21697 PF01103 Surface antigen NH62_21697 PF07244 Surface antigen variable number repeat NH62_21698 PF01103 Surface antigen NH62_21698 PF07244 Surface antigen variable number repeat NH62_21699 PF17820 PDZ domain NH62_21699 PF02163 Peptidase family M50 NH62_21700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NH62_21700 PF13288 DXP reductoisomerase C-terminal domain NH62_21700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NH62_21702 PF01255 Putative undecaprenyl diphosphate synthase NH62_21703 PF01765 Ribosome recycling factor NH62_21704 PF00696 Amino acid kinase family NH62_21705 PF00889 Elongation factor TS NH62_21706 PF00318 Ribosomal protein S2 NH62_21707 PF00557 Metallopeptidase family M24 NH62_21708 PF01909 Nucleotidyltransferase domain NH62_21708 PF01966 HD domain NH62_21708 PF08335 GlnD PII-uridylyltransferase NH62_21709 PF11944 Protein of unknown function (DUF3461) NH62_21710 PF04608 Phosphatidylglycerophosphatase A NH62_21711 PF00586 AIR synthase related protein, N-terminal domain NH62_21711 PF02769 AIR synthase related protein, C-terminal domain NH62_21712 PF01029 NusB family NH62_21713 PF00885 6,7-dimethyl-8-ribityllumazine synthase NH62_21714 PF00925 GTP cyclohydrolase II NH62_21714 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NH62_21715 PF00677 Lumazine binding domain NH62_21716 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NH62_21716 PF01872 RibD C-terminal domain NH62_21717 PF03477 ATP cone domain NH62_21718 PF00171 Aldehyde dehydrogenase family NH62_21719 PF00696 Amino acid kinase family NH62_21719 PF01472 PUA domain NH62_21720 PF07417 Sigma factor-binding transcriptional regulator Crl NH62_21722 PF00156 Phosphoribosyl transferase domain NH62_21723 PF00860 Permease family NH62_21724 PF07687 Peptidase dimerisation domain NH62_21724 PF01546 Peptidase family M20/M25/M40 NH62_21725 PF18030 RimK PreATP-grasp domain NH62_21725 PF08443 RimK-like ATP-grasp domain NH62_21726 PF18030 RimK PreATP-grasp domain NH62_21726 PF08443 RimK-like ATP-grasp domain NH62_21729 PF00209 Sodium:neurotransmitter symporter family NH62_21730 PF17158 Membrane-associated sensor, integral membrane domain NH62_21730 PF00990 Diguanylate cyclase, GGDEF domain NH62_21732 PF00817 impB/mucB/samB family NH62_21732 PF11798 IMS family HHH motif NH62_21734 PF02424 ApbE family NH62_21735 PF00970 Oxidoreductase FAD-binding domain NH62_21735 PF00111 2Fe-2S iron-sulfur cluster binding domain NH62_21735 PF00175 Oxidoreductase NAD-binding domain NH62_21736 PF02508 Rnf-Nqr subunit, membrane protein NH62_21737 PF02508 Rnf-Nqr subunit, membrane protein NH62_21738 PF04205 FMN-binding domain NH62_21739 PF03116 NQR2, RnfD, RnfE family NH62_21740 PF11973 NQRA C-terminal domain NH62_21740 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NH62_21741 PF01722 BolA-like protein NH62_21742 PF05175 Methyltransferase small domain NH62_21744 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NH62_21745 PF07690 Major Facilitator Superfamily NH62_21747 PF04545 Sigma-70, region 4 NH62_21747 PF04542 Sigma-70 region 2 NH62_21749 PF03502 Nucleoside-specific channel-forming protein, Tsx NH62_21750 PF08546 Ketopantoate reductase PanE/ApbA C terminal NH62_21750 PF02558 Ketopantoate reductase PanE/ApbA NH62_21751 PF01965 DJ-1/PfpI family NH62_21752 PF00266 Aminotransferase class-V NH62_21753 PF02657 Fe-S metabolism associated domain NH62_21754 PF00899 ThiF family NH62_21755 PF06725 3D domain NH62_21755 PF03562 MltA specific insert domain NH62_21757 PF00696 Amino acid kinase family NH62_21757 PF00583 Acetyltransferase (GNAT) family NH62_21759 PF13538 UvrD-like helicase C-terminal domain NH62_21760 PF00580 UvrD/REP helicase N-terminal domain NH62_21760 PF13361 UvrD-like helicase C-terminal domain NH62_21760 PF12705 PD-(D/E)XK nuclease superfamily NH62_21761 PF17946 RecC C-terminal domain NH62_21764 PF07130 YebG protein NH62_21765 PF14602 Hexapeptide repeat of succinyl-transferase NH62_21765 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NH62_21767 PF00583 Acetyltransferase (GNAT) family NH62_21768 PF02080 TrkA-C domain NH62_21768 PF18030 RimK PreATP-grasp domain NH62_21768 PF08443 RimK-like ATP-grasp domain NH62_21769 PF01544 CorA-like Mg2+ transporter protein NH62_21771 PF01588 Putative tRNA binding domain NH62_21772 PF00356 Bacterial regulatory proteins, lacI family NH62_21773 PF02837 Glycosyl hydrolases family 2, sugar binding domain NH62_21773 PF02929 Beta galactosidase small chain NH62_21773 PF16353 Domain of unknown function(DUF4981) NH62_21773 PF00703 Glycosyl hydrolases family 2 NH62_21773 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NH62_21775 PF00072 Response regulator receiver domain NH62_21776 PF00501 AMP-binding enzyme NH62_21777 PF03764 Elongation factor G, domain IV NH62_21777 PF03144 Elongation factor Tu domain 2 NH62_21777 PF00009 Elongation factor Tu GTP binding domain NH62_21777 PF14492 Elongation Factor G, domain II NH62_21777 PF00679 Elongation factor G C-terminus NH62_21778 PF18073 Rubredoxin metal binding domain NH62_21780 PF18429 Domain of unknown function (DUF5609) NH62_21781 PF18429 Domain of unknown function (DUF5609) NH62_21783 PF01048 Phosphorylase superfamily NH62_21784 PF01676 Metalloenzyme superfamily NH62_21785 PF00591 Glycosyl transferase family, a/b domain NH62_21785 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NH62_21785 PF02885 Glycosyl transferase family, helical bundle domain NH62_21786 PF01791 DeoC/LacD family aldolase NH62_21787 PF01773 Na+ dependent nucleoside transporter N-terminus NH62_21787 PF07662 Na+ dependent nucleoside transporter C-terminus NH62_21787 PF07670 Nucleoside recognition NH62_21788 PF01026 TatD related DNase NH62_21790 PF03883 Peroxide stress protein YaaA NH62_21791 PF01235 Sodium:alanine symporter family NH62_21794 PF03167 Uracil DNA glycosylase superfamily NH62_21795 PF01261 Xylose isomerase-like TIM barrel NH62_21796 PF01228 Glycine radical NH62_21797 PF14821 Threonine synthase N terminus NH62_21797 PF00291 Pyridoxal-phosphate dependent enzyme NH62_21798 PF00288 GHMP kinases N terminal domain NH62_21798 PF08544 GHMP kinases C terminal NH62_21799 PF01842 ACT domain NH62_21799 PF13840 ACT domain NH62_21799 PF00742 Homoserine dehydrogenase NH62_21799 PF03447 Homoserine dehydrogenase, NAD binding domain NH62_21799 PF00696 Amino acid kinase family NH62_21801 PF03737 Aldolase/RraA NH62_21803 PF00072 Response regulator receiver domain NH62_21803 PF00486 Transcriptional regulatory protein, C terminal NH62_21804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21804 PF00512 His Kinase A (phospho-acceptor) domain NH62_21804 PF01627 Hpt domain NH62_21804 PF00989 PAS fold NH62_21804 PF00072 Response regulator receiver domain NH62_21804 PF18415 Histidine kinase receptor ArcB trans-membrane domain NH62_21805 PF01590 GAF domain NH62_21805 PF00360 Phytochrome region NH62_21805 PF00990 Diguanylate cyclase, GGDEF domain NH62_21805 PF00563 EAL domain NH62_21806 PF16199 Radical_SAM C-terminal domain NH62_21806 PF04055 Radical SAM superfamily NH62_21807 PF00310 Glutamine amidotransferases class-II NH62_21807 PF04898 Glutamate synthase central domain NH62_21807 PF01645 Conserved region in glutamate synthase NH62_21807 PF01493 GXGXG motif NH62_21808 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_21808 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NH62_21809 PF00310 Glutamine amidotransferases class-II NH62_21809 PF01645 Conserved region in glutamate synthase NH62_21809 PF01493 GXGXG motif NH62_21809 PF04898 Glutamate synthase central domain NH62_21810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NH62_21810 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_21812 PF01048 Phosphorylase superfamily NH62_21814 PF01497 Periplasmic binding protein NH62_21815 PF03458 UPF0126 domain NH62_21816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21816 PF03466 LysR substrate binding domain NH62_21817 PF01925 Sulfite exporter TauE/SafE NH62_21818 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NH62_21819 PF00005 ABC transporter NH62_21823 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NH62_21823 PF02142 MGS-like domain NH62_21823 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH62_21824 PF00117 Glutamine amidotransferase class-I NH62_21824 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NH62_21825 PF01113 Dihydrodipicolinate reductase, N-terminus NH62_21825 PF05173 Dihydrodipicolinate reductase, C-terminus NH62_21826 PF00293 NUDIX domain NH62_21827 PF07517 SecA DEAD-like domain NH62_21827 PF07516 SecA Wing and Scaffold domain NH62_21827 PF01043 SecA preprotein cross-linking domain NH62_21827 PF02810 SEC-C motif NH62_21829 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NH62_21830 PF00091 Tubulin/FtsZ family, GTPase domain NH62_21830 PF12327 FtsZ family, C-terminal domain NH62_21831 PF02491 SHS2 domain inserted in FTSA NH62_21832 PF03799 Cell division protein FtsQ NH62_21832 PF08478 POTRA domain, FtsQ-type NH62_21833 PF08245 Mur ligase middle domain NH62_21833 PF01225 Mur ligase family, catalytic domain NH62_21833 PF02875 Mur ligase family, glutamate ligase domain NH62_21834 PF03033 Glycosyltransferase family 28 N-terminal domain NH62_21834 PF04101 Glycosyltransferase family 28 C-terminal domain NH62_21835 PF01098 Cell cycle protein NH62_21836 PF02875 Mur ligase family, glutamate ligase domain NH62_21836 PF08245 Mur ligase middle domain NH62_21837 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NH62_21837 PF00953 Glycosyl transferase family 4 NH62_21838 PF01225 Mur ligase family, catalytic domain NH62_21838 PF02875 Mur ligase family, glutamate ligase domain NH62_21838 PF08245 Mur ligase middle domain NH62_21839 PF08245 Mur ligase middle domain NH62_21839 PF02875 Mur ligase family, glutamate ligase domain NH62_21839 PF01225 Mur ligase family, catalytic domain NH62_21840 PF03717 Penicillin-binding Protein dimerisation domain NH62_21840 PF00905 Penicillin binding protein transpeptidase domain NH62_21841 PF04999 Cell division protein FtsL NH62_21842 PF01795 MraW methylase family NH62_21843 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH62_21843 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_21844 PF00364 Biotin-requiring enzyme NH62_21844 PF02817 e3 binding domain NH62_21844 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NH62_21845 PF00456 Transketolase, thiamine diphosphate binding domain NH62_21845 PF17831 Pyruvate dehydrogenase E1 component middle domain NH62_21846 PF07729 FCD domain NH62_21846 PF00392 Bacterial regulatory proteins, gntR family NH62_21847 PF00149 Calcineurin-like phosphoesterase NH62_21847 PF02872 5'-nucleotidase, C-terminal domain NH62_21848 PF01368 DHH family NH62_21848 PF02272 DHHA1 domain NH62_21848 PF17768 RecJ OB domain NH62_21849 PF10411 Disulfide bond isomerase protein N-terminus NH62_21849 PF13098 Thioredoxin-like domain NH62_21850 PF02899 Phage integrase, N-terminal SAM-like domain NH62_21850 PF00589 Phage integrase family NH62_21851 PF00258 Flavodoxin NH62_21852 PF01510 N-acetylmuramoyl-L-alanine amidase NH62_21853 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NH62_21853 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NH62_21854 PF07963 Prokaryotic N-terminal methylation motif NH62_21854 PF00114 Pilin (bacterial filament) NH62_21855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NH62_21855 PF00437 Type II/IV secretion system protein NH62_21856 PF00482 Type II secretion system (T2SS), protein F NH62_21857 PF06750 Bacterial Peptidase A24 N-terminal domain NH62_21857 PF01478 Type IV leader peptidase family NH62_21858 PF01121 Dephospho-CoA kinase NH62_21859 PF07072 Cell division protein NH62_21860 PF03884 DNA gyrase inhibitor YacG NH62_21861 PF03989 DNA gyrase C-terminal domain, beta-propeller NH62_21861 PF00521 DNA gyrase/topoisomerase IV, subunit A NH62_21862 PF00986 DNA gyrase B subunit, carboxyl terminus NH62_21862 PF01751 Toprim domain NH62_21862 PF00204 DNA gyrase B NH62_21862 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21863 PF05728 Uncharacterised protein family (UPF0227) NH62_21864 PF00149 Calcineurin-like phosphoesterase NH62_21865 PF06853 Protein of unknown function (DUF1249) NH62_21866 PF00293 NUDIX domain NH62_21867 PF02321 Outer membrane efflux protein NH62_21868 PF01467 Cytidylyltransferase-like NH62_21868 PF00294 pfkB family carbohydrate kinase NH62_21869 PF03710 Glutamate-ammonia ligase adenylyltransferase NH62_21869 PF08335 GlnD PII-uridylyltransferase NH62_21870 PF00672 HAMP domain NH62_21870 PF02743 Cache domain NH62_21870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_21872 PF01928 CYTH domain NH62_21873 PF01865 Protein of unknown function DUF47 NH62_21874 PF01384 Phosphate transporter family NH62_21875 PF08239 Bacterial SH3 domain NH62_21877 PF01471 Putative peptidoglycan binding domain NH62_21877 PF13401 AAA domain NH62_21878 PF12627 Probable RNA and SrmB- binding site of polymerase A NH62_21878 PF01966 HD domain NH62_21878 PF01743 Poly A polymerase head domain NH62_21879 PF03952 Enolase, N-terminal domain NH62_21879 PF00113 Enolase, C-terminal TIM barrel domain NH62_21880 PF06418 CTP synthase N-terminus NH62_21880 PF00117 Glutamine amidotransferase class-I NH62_21881 PF03819 MazG nucleotide pyrophosphohydrolase domain NH62_21882 PF13291 ACT domain NH62_21882 PF02824 TGS domain NH62_21882 PF04607 Region found in RelA / SpoT proteins NH62_21883 PF05958 tRNA (Uracil-5-)-methyltransferase NH62_21883 PF01938 TRAM domain NH62_21884 PF01627 Hpt domain NH62_21884 PF00512 His Kinase A (phospho-acceptor) domain NH62_21884 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_21884 PF00672 HAMP domain NH62_21884 PF00072 Response regulator receiver domain NH62_21884 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NH62_21885 PF00990 Diguanylate cyclase, GGDEF domain NH62_21888 PF01648 4'-phosphopantetheinyl transferase superfamily NH62_21889 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NH62_21890 PF02565 Recombination protein O C terminal NH62_21890 PF11967 Recombination protein O N terminal NH62_21891 PF07650 KH domain NH62_21891 PF01926 50S ribosome-binding GTPase NH62_21892 PF14622 Ribonuclease-III-like NH62_21892 PF00035 Double-stranded RNA binding motif NH62_21893 PF10502 Signal peptidase, peptidase S26 NH62_21894 PF00679 Elongation factor G C-terminus NH62_21894 PF00009 Elongation factor Tu GTP binding domain NH62_21894 PF03144 Elongation factor Tu domain 2 NH62_21894 PF06421 GTP-binding protein LepA C-terminus NH62_21896 PF17188 MucB/RseB C-terminal domain NH62_21896 PF03888 MucB/RseB N-terminal domain NH62_21897 PF03873 Anti sigma-E protein RseA, C-terminal domain NH62_21897 PF03872 Anti sigma-E protein RseA, N-terminal domain NH62_21898 PF04542 Sigma-70 region 2 NH62_21898 PF08281 Sigma-70, region 4 NH62_21899 PF00890 FAD binding domain NH62_21899 PF02910 Fumarate reductase flavoprotein C-term NH62_21901 PF03937 Flavinator of succinate dehydrogenase NH62_21904 PF01494 FAD binding domain NH62_21905 PF01494 FAD binding domain NH62_21906 PF03695 Uncharacterised protein family (UPF0149) NH62_21907 PF05164 Cell division protein ZapA NH62_21908 PF01812 5-formyltetrahydrofolate cyclo-ligase family NH62_21909 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NH62_21910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH62_21910 PF01842 ACT domain NH62_21910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH62_21911 PF10369 Small subunit of acetolactate synthase NH62_21912 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH62_21912 PF00205 Thiamine pyrophosphate enzyme, central domain NH62_21912 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH62_21913 PF00501 AMP-binding enzyme NH62_21914 PF03466 LysR substrate binding domain NH62_21914 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_21916 PF01569 PAP2 superfamily NH62_21918 PF08502 LeuA allosteric (dimerisation) domain NH62_21918 PF00682 HMGL-like NH62_21919 PF00180 Isocitrate/isopropylmalate dehydrogenase NH62_21920 PF00330 Aconitase family (aconitate hydratase) NH62_21921 PF00694 Aconitase C-terminal domain NH62_21930 PF00072 Response regulator receiver domain NH62_21933 PF03739 Lipopolysaccharide export system permease LptF/LptG NH62_21934 PF03739 Lipopolysaccharide export system permease LptF/LptG NH62_21935 PF00883 Cytosol aminopeptidase family, catalytic domain NH62_21935 PF02789 Cytosol aminopeptidase family, N-terminal domain NH62_21936 PF04364 DNA polymerase III chi subunit, HolC NH62_21937 PF08264 Anticodon-binding domain of tRNA NH62_21937 PF10458 Valyl tRNA synthetase tRNA binding arm NH62_21937 PF00133 tRNA synthetases class I (I, L, M and V) NH62_21938 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NH62_21938 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH62_21939 PF00849 RNA pseudouridylate synthase NH62_21940 PF00176 SNF2 family N-terminal domain NH62_21940 PF18337 RapA N-terminal Tudor like domain NH62_21940 PF00271 Helicase conserved C-terminal domain NH62_21940 PF12137 RNA polymerase recycling family C-terminal NH62_21940 PF18339 RapA N-terminal Tudor like domain 1 NH62_21941 PF13638 PIN domain NH62_21941 PF02562 PhoH-like protein NH62_21942 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NH62_21942 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NH62_21943 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NH62_21943 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NH62_21944 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NH62_21944 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NH62_21945 PF01042 Endoribonuclease L-PSP NH62_21946 PF01553 Acyltransferase NH62_21947 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NH62_21948 PF01722 BolA-like protein NH62_21950 PF05494 MlaC protein NH62_21951 PF02470 MlaD protein NH62_21952 PF02405 Permease MlaE NH62_21953 PF00005 ABC transporter NH62_21954 PF01699 Sodium/calcium exchanger protein NH62_21955 PF01380 SIS domain NH62_21955 PF00571 CBS domain NH62_21958 PF03968 OstA-like protein NH62_21959 PF00005 ABC transporter NH62_21959 PF12399 Branched-chain amino acid ATP-binding cassette transporter NH62_21960 PF04963 Sigma-54 factor, core binding domain NH62_21960 PF00309 Sigma-54 factor, Activator interacting domain (AID) NH62_21960 PF04552 Sigma-54, DNA binding domain NH62_21961 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NH62_21962 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NH62_21963 PF03668 P-loop ATPase protein family NH62_21964 PF00381 PTS HPr component phosphorylation site NH62_21965 PF01769 Divalent cation transporter NH62_21965 PF00571 CBS domain NH62_21965 PF03448 MgtE intracellular N domain NH62_21966 PF01523 Putative modulator of DNA gyrase NH62_21967 PF04751 Protein of unknown function (DUF615) NH62_21968 PF00005 ABC transporter NH62_21969 PF00528 Binding-protein-dependent transport system inner membrane component NH62_21971 PF02441 Flavoprotein NH62_21972 PF01225 Mur ligase family, catalytic domain NH62_21972 PF02875 Mur ligase family, glutamate ligase domain NH62_21972 PF08245 Mur ligase middle domain NH62_21973 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NH62_21974 PF00719 Inorganic pyrophosphatase NH62_21975 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NH62_21976 PF04357 TamB, inner membrane protein subunit of TAM complex NH62_21977 PF17243 POTRA domain TamA domain 1 NH62_21977 PF07244 Surface antigen variable number repeat NH62_21977 PF01103 Surface antigen NH62_21978 PF01625 Peptide methionine sulfoxide reductase NH62_21979 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NH62_21980 PF10795 Protein of unknown function (DUF2607) NH62_21982 PF00005 ABC transporter NH62_21987 PF00009 Elongation factor Tu GTP binding domain NH62_21988 PF01507 Phosphoadenosine phosphosulfate reductase family NH62_21989 PF10414 Sirohaem synthase dimerisation region NH62_21989 PF14824 Sirohaem biosynthesis protein central NH62_21989 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NH62_21990 PF02872 5'-nucleotidase, C-terminal domain NH62_21990 PF00149 Calcineurin-like phosphoesterase NH62_21992 PF00271 Helicase conserved C-terminal domain NH62_21992 PF00270 DEAD/DEAH box helicase NH62_21992 PF03880 DbpA RNA binding domain NH62_21993 PF13673 Acetyltransferase (GNAT) domain NH62_21994 PF00892 EamA-like transporter family NH62_21995 PF08525 Opacity-associated protein A N-terminal motif NH62_21995 PF04225 Opacity-associated protein A LysM-like domain NH62_21996 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_21996 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NH62_21997 PF01797 Transposase IS200 like NH62_21999 PF01196 Ribosomal protein L17 NH62_22000 PF01000 RNA polymerase Rpb3/RpoA insert domain NH62_22000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NH62_22000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NH62_22001 PF01479 S4 domain NH62_22001 PF00163 Ribosomal protein S4/S9 N-terminal domain NH62_22002 PF00411 Ribosomal protein S11 NH62_22003 PF00416 Ribosomal protein S13/S18 NH62_22004 PF00444 Ribosomal protein L36 NH62_22005 PF00344 SecY translocase NH62_22006 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NH62_22007 PF00327 Ribosomal protein L30p/L7e NH62_22008 PF00333 Ribosomal protein S5, N-terminal domain NH62_22008 PF03719 Ribosomal protein S5, C-terminal domain NH62_22009 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NH62_22010 PF00347 Ribosomal protein L6 NH62_22011 PF00410 Ribosomal protein S8 NH62_22012 PF00253 Ribosomal protein S14p/S29e NH62_22013 PF00673 ribosomal L5P family C-terminus NH62_22013 PF00281 Ribosomal protein L5 NH62_22014 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NH62_22014 PF00467 KOW motif NH62_22015 PF00238 Ribosomal protein L14p/L23e NH62_22016 PF00366 Ribosomal protein S17 NH62_22017 PF00831 Ribosomal L29 protein NH62_22018 PF00252 Ribosomal protein L16p/L10e NH62_22019 PF00189 Ribosomal protein S3, C-terminal domain NH62_22019 PF07650 KH domain NH62_22020 PF00237 Ribosomal protein L22p/L17e NH62_22021 PF00203 Ribosomal protein S19 NH62_22022 PF00181 Ribosomal Proteins L2, RNA binding domain NH62_22022 PF03947 Ribosomal Proteins L2, C-terminal domain NH62_22023 PF00276 Ribosomal protein L23 NH62_22024 PF00573 Ribosomal protein L4/L1 family NH62_22025 PF00297 Ribosomal protein L3 NH62_22026 PF00338 Ribosomal protein S10p/S20e NH62_22027 PF08032 RNA 2'-O ribose methyltransferase substrate binding NH62_22027 PF00588 SpoU rRNA Methylase family NH62_22028 PF00575 S1 RNA binding domain NH62_22028 PF00773 RNB domain NH62_22028 PF08206 Ribonuclease B OB domain NH62_22028 PF08461 Ribonuclease R winged-helix domain NH62_22028 PF17876 Cold shock domain NH62_22029 PF11893 Domain of unknown function (DUF3413) NH62_22029 PF00884 Sulfatase NH62_22030 PF08238 Sel1 repeat NH62_22031 PF00709 Adenylosuccinate synthetase NH62_22032 PF01112 Asparaginase NH62_22033 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_22035 PF00999 Sodium/hydrogen exchanger family NH62_22035 PF02254 TrkA-N domain NH62_22036 PF02525 Flavodoxin-like fold NH62_22037 PF12848 ABC transporter NH62_22037 PF00005 ABC transporter NH62_22039 PF00561 alpha/beta hydrolase fold NH62_22040 PF06794 Uncharacterised protein family (UPF0270) NH62_22041 PF00485 Phosphoribulokinase / Uridine kinase family NH62_22042 PF13545 Crp-like helix-turn-helix domain NH62_22042 PF00027 Cyclic nucleotide-binding domain NH62_22044 PF00171 Aldehyde dehydrogenase family NH62_22045 PF04958 Arginine N-succinyltransferase beta subunit NH62_22046 PF00202 Aminotransferase class-III NH62_22047 PF00117 Glutamine amidotransferase class-I NH62_22048 PF18693 TRAM domain NH62_22048 PF04055 Radical SAM superfamily NH62_22048 PF00919 Uncharacterized protein family UPF0004 NH62_22051 PF00579 tRNA synthetases class I (W and Y) NH62_22052 PF13419 Haloacid dehalogenase-like hydrolase NH62_22053 PF00834 Ribulose-phosphate 3 epimerase family NH62_22054 PF02086 D12 class N6 adenine-specific DNA methyltransferase NH62_22056 PF01761 3-dehydroquinate synthase NH62_22057 PF01202 Shikimate kinase NH62_22058 PF03958 Bacterial type II/III secretion system short domain NH62_22058 PF00263 Bacterial type II and III secretion system protein NH62_22058 PF07660 Secretin and TonB N terminus short domain NH62_22058 PF11741 AMIN domain NH62_22063 PF00905 Penicillin binding protein transpeptidase domain NH62_22063 PF00912 Transglycosylase NH62_22063 PF17092 Penicillin-binding protein OB-like domain NH62_22064 PF03466 LysR substrate binding domain NH62_22064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_22065 PF08534 Redoxin NH62_22065 PF00462 Glutaredoxin NH62_22066 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH62_22066 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_22068 PF00206 Lyase NH62_22068 PF14698 Argininosuccinate lyase C-terminal NH62_22069 PF00764 Arginosuccinate synthase NH62_22070 PF00696 Amino acid kinase family NH62_22071 PF01118 Semialdehyde dehydrogenase, NAD binding domain NH62_22071 PF02774 Semialdehyde dehydrogenase, dimerisation domain NH62_22072 PF01546 Peptidase family M20/M25/M40 NH62_22072 PF07687 Peptidase dimerisation domain NH62_22073 PF00311 Phosphoenolpyruvate carboxylase NH62_22075 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_22075 PF06426 Serine acetyltransferase, N-terminal NH62_22076 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NH62_22076 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NH62_22077 PF02556 Preprotein translocase subunit SecB NH62_22078 PF00581 Rhodanese-like domain NH62_22079 PF00152 tRNA synthetases class II (D, K and N) NH62_22080 PF00890 FAD binding domain NH62_22080 PF02910 Fumarate reductase flavoprotein C-term NH62_22081 PF13183 4Fe-4S dicluster domain NH62_22081 PF13085 2Fe-2S iron-sulfur cluster binding domain NH62_22082 PF02300 Fumarate reductase subunit C NH62_22083 PF02313 Fumarate reductase subunit D NH62_22084 PF09285 Elongation factor P, C-terminal NH62_22084 PF01132 Elongation factor P (EF-P) OB domain NH62_22084 PF08207 Elongation factor P (EF-P) KOW-like domain NH62_22085 PF04055 Radical SAM superfamily NH62_22087 PF00118 TCP-1/cpn60 chaperonin family NH62_22088 PF00166 Chaperonin 10 Kd subunit NH62_22089 PF08220 DeoR-like helix-turn-helix domain NH62_22089 PF00455 DeoR C terminal sensor domain NH62_22093 PF00121 Triosephosphate isomerase NH62_22095 PF03737 Aldolase/RraA NH62_22096 PF01040 UbiA prenyltransferase family NH62_22097 PF00004 ATPase family associated with various cellular activities (AAA) NH62_22097 PF07724 AAA domain (Cdc48 subfamily) NH62_22097 PF10431 C-terminal, D2-small domain, of ClpB protein NH62_22098 PF00227 Proteasome subunit NH62_22099 PF05036 Sporulation related domain NH62_22100 PF00356 Bacterial regulatory proteins, lacI family NH62_22101 PF00270 DEAD/DEAH box helicase NH62_22101 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NH62_22101 PF18074 Primosomal protein N C-terminal domain NH62_22101 PF17764 3′ DNA-binding domain (3′BD) NH62_22101 PF00271 Helicase conserved C-terminal domain NH62_22102 PF01197 Ribosomal protein L31 NH62_22103 PF00390 Malic enzyme, N-terminal domain NH62_22103 PF03949 Malic enzyme, NAD binding domain NH62_22104 PF01340 Met Apo-repressor, MetJ NH62_22105 PF01053 Cys/Met metabolism PLP-dependent enzyme NH62_22106 PF00742 Homoserine dehydrogenase NH62_22106 PF03447 Homoserine dehydrogenase, NAD binding domain NH62_22106 PF00696 Amino acid kinase family NH62_22107 PF02219 Methylenetetrahydrofolate reductase NH62_22108 PF06005 Cell division protein ZapB NH62_22109 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NH62_22110 PF00365 Phosphofructokinase NH62_22111 PF01545 Cation efflux family NH62_22111 PF16916 Dimerisation domain of Zinc Transporter NH62_22113 PF00072 Response regulator receiver domain NH62_22113 PF00486 Transcriptional regulatory protein, C terminal NH62_22114 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_22114 PF00512 His Kinase A (phospho-acceptor) domain NH62_22114 PF16527 Two-component sensor protein CpxA, periplasmic domain NH62_22114 PF00672 HAMP domain NH62_22115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NH62_22115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NH62_22116 PF00588 SpoU rRNA Methylase family NH62_22117 PF04186 FxsA cytoplasmic membrane protein NH62_22118 PF17158 Membrane-associated sensor, integral membrane domain NH62_22118 PF00990 Diguanylate cyclase, GGDEF domain NH62_22119 PF10415 Fumarase C C-terminus NH62_22119 PF00206 Lyase NH62_22120 PF03605 Anaerobic c4-dicarboxylate membrane transporter NH62_22121 PF03714 Bacterial pullanase-associated domain NH62_22121 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NH62_22121 PF11852 Domain of unknown function (DUF3372) NH62_22121 PF17967 Pullulanase N2 domain NH62_22121 PF18494 Pullulanase Ins domain NH62_22122 PF02683 Cytochrome C biogenesis protein transmembrane region NH62_22122 PF11412 Disulphide bond corrector protein DsbC NH62_22123 PF00196 Bacterial regulatory proteins, luxR family NH62_22123 PF00072 Response regulator receiver domain NH62_22124 PF02080 TrkA-C domain NH62_22124 PF03471 Transporter associated domain NH62_22124 PF00999 Sodium/hydrogen exchanger family NH62_22126 PF00474 Sodium:solute symporter family NH62_22127 PF02592 Putative vitamin uptake transporter NH62_22128 PF00625 Guanylate kinase NH62_22129 PF01192 RNA polymerase Rpb6 NH62_22130 PF02824 TGS domain NH62_22130 PF04607 Region found in RelA / SpoT proteins NH62_22130 PF13291 ACT domain NH62_22131 PF00270 DEAD/DEAH box helicase NH62_22131 PF00271 Helicase conserved C-terminal domain NH62_22131 PF17191 RecG wedge domain NH62_22132 PF00860 Permease family NH62_22133 PF00672 HAMP domain NH62_22133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_22133 PF00512 His Kinase A (phospho-acceptor) domain NH62_22134 PF00486 Transcriptional regulatory protein, C terminal NH62_22134 PF00072 Response regulator receiver domain NH62_22135 PF17152 Periplasmic sensor domain NH62_22135 PF00990 Diguanylate cyclase, GGDEF domain NH62_22136 PF03449 Transcription elongation factor, N-terminal NH62_22136 PF01272 Transcription elongation factor, GreA/GreB, C-term NH62_22137 PF00575 S1 RNA binding domain NH62_22137 PF17674 HHH domain NH62_22137 PF09371 Tex-like protein N-terminal domain NH62_22137 PF16921 Tex protein YqgF-like domain NH62_22139 PF00561 alpha/beta hydrolase fold NH62_22140 PF00156 Phosphoribosyl transferase domain NH62_22141 PF01106 NifU-like domain NH62_22141 PF01521 Iron-sulphur cluster biosynthesis NH62_22142 PF00293 NUDIX domain NH62_22143 PF00459 Inositol monophosphatase family NH62_22144 PF01203 Type II secretion system (T2SS), protein N NH62_22145 PF04612 Type II secretion system (T2SS), protein M NH62_22146 PF12693 GspL periplasmic domain NH62_22146 PF05134 Type II secretion system (T2SS), protein L NH62_22147 PF03934 Type II secretion system (T2SS), protein K NH62_22148 PF11612 Type II secretion system (T2SS), protein J NH62_22148 PF07963 Prokaryotic N-terminal methylation motif NH62_22149 PF02501 Type II secretion system (T2SS), protein I NH62_22149 PF07963 Prokaryotic N-terminal methylation motif NH62_22150 PF12019 Type II transport protein GspH NH62_22151 PF07963 Prokaryotic N-terminal methylation motif NH62_22151 PF08334 Type II secretion system (T2SS), protein G NH62_22152 PF00482 Type II secretion system (T2SS), protein F NH62_22153 PF00437 Type II/IV secretion system protein NH62_22154 PF00263 Bacterial type II and III secretion system protein NH62_22154 PF03958 Bacterial type II/III secretion system short domain NH62_22155 PF11356 Type II secretion system protein C NH62_22156 PF01479 S4 domain NH62_22157 PF01430 Hsp33 protein NH62_22158 PF01293 Phosphoenolpyruvate carboxykinase NH62_22160 PF09500 Putative thioesterase (yiiD_Cterm) NH62_22160 PF00583 Acetyltransferase (GNAT) family NH62_22161 PF02580 D-Tyr-tRNA(Tyr) deacylase NH62_22162 PF03631 Virulence factor BrkB NH62_22166 PF03951 Glutamine synthetase, beta-Grasp domain NH62_22166 PF00120 Glutamine synthetase, catalytic domain NH62_22168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_22168 PF00989 PAS fold NH62_22168 PF00512 His Kinase A (phospho-acceptor) domain NH62_22169 PF02954 Bacterial regulatory protein, Fis family NH62_22169 PF00072 Response regulator receiver domain NH62_22169 PF00158 Sigma-54 interaction domain NH62_22170 PF00990 Diguanylate cyclase, GGDEF domain NH62_22170 PF13188 PAS domain NH62_22170 PF03707 Bacterial signalling protein N terminal repeat NH62_22170 PF00563 EAL domain NH62_22171 PF00962 Adenosine/AMP deaminase NH62_22185 PF01507 Phosphoadenosine phosphosulfate reductase family NH62_22186 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NH62_22186 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NH62_22187 PF00175 Oxidoreductase NAD-binding domain NH62_22187 PF00258 Flavodoxin NH62_22187 PF00667 FAD binding domain NH62_22190 PF09583 Phage shock protein G (Phageshock_PspG) NH62_22191 PF01207 Dihydrouridine synthase (Dus) NH62_22192 PF01475 Ferric uptake regulator family NH62_22194 PF12706 Beta-lactamase superfamily domain NH62_22195 PF00342 Phosphoglucose isomerase NH62_22196 PF01894 Uncharacterised protein family UPF0047 NH62_22197 PF00842 Alanine racemase, C-terminal domain NH62_22197 PF01168 Alanine racemase, N-terminal domain NH62_22198 PF03796 DnaB-like helicase C terminal domain NH62_22198 PF00772 DnaB-like helicase N terminal domain NH62_22200 PF03948 Ribosomal protein L9, C-terminal domain NH62_22200 PF01281 Ribosomal protein L9, N-terminal domain NH62_22201 PF01084 Ribosomal protein S18 NH62_22202 PF00436 Single-strand binding protein family NH62_22203 PF01250 Ribosomal protein S6 NH62_22204 PF00210 Ferritin-like domain NH62_22205 PF04324 BFD-like [2Fe-2S] binding domain NH62_22206 PF00009 Elongation factor Tu GTP binding domain NH62_22206 PF03144 Elongation factor Tu domain 2 NH62_22206 PF03143 Elongation factor Tu C-terminal domain NH62_22207 PF00009 Elongation factor Tu GTP binding domain NH62_22207 PF00679 Elongation factor G C-terminus NH62_22207 PF14492 Elongation Factor G, domain II NH62_22207 PF03764 Elongation factor G, domain IV NH62_22207 PF03144 Elongation factor Tu domain 2 NH62_22208 PF00177 Ribosomal protein S7p/S5e NH62_22209 PF00164 Ribosomal protein S12/S23 NH62_22211 PF02635 DsrE/DsrF-like family NH62_22212 PF02635 DsrE/DsrF-like family NH62_22213 PF08348 YheO-like PAS domain NH62_22213 PF13309 HTH domain NH62_22214 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NH62_22214 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NH62_22216 PF04102 SlyX NH62_22217 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NH62_22218 PF01145 SPFH domain / Band 7 family NH62_22219 PF12221 Bacterial membrane protein N terminal NH62_22219 PF01145 SPFH domain / Band 7 family NH62_22220 PF01926 50S ribosome-binding GTPase NH62_22220 PF16360 GTP-binding GTPase Middle Region NH62_22220 PF13167 GTP-binding GTPase N-terminal NH62_22221 PF17209 Hfq protein NH62_22223 PF08676 MutL C terminal dimerisation domain NH62_22223 PF01119 DNA mismatch repair protein, C-terminal domain NH62_22224 PF01520 N-acetylmuramoyl-L-alanine amidase NH62_22225 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NH62_22226 PF08331 Domain of unknown function (DUF1730) NH62_22236 PF00929 Exonuclease NH62_22237 PF03193 RsgA GTPase NH62_22238 PF02666 Phosphatidylserine decarboxylase NH62_22239 PF00939 Sodium:sulfate symporter transmembrane region NH62_22241 PF01676 Metalloenzyme superfamily NH62_22241 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NH62_22242 PF01551 Peptidase family M23 NH62_22244 PF08360 QacR-like protein, C-terminal region NH62_22244 PF00440 Bacterial regulatory proteins, tetR family NH62_22245 PF01208 Uroporphyrinogen decarboxylase (URO-D) NH62_22246 PF01208 Uroporphyrinogen decarboxylase (URO-D) NH62_22247 PF09297 NADH pyrophosphatase zinc ribbon domain NH62_22247 PF00293 NUDIX domain NH62_22248 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NH62_22249 PF00623 RNA polymerase Rpb1, domain 2 NH62_22249 PF04997 RNA polymerase Rpb1, domain 1 NH62_22249 PF05000 RNA polymerase Rpb1, domain 4 NH62_22249 PF04983 RNA polymerase Rpb1, domain 3 NH62_22249 PF04998 RNA polymerase Rpb1, domain 5 NH62_22250 PF04560 RNA polymerase Rpb2, domain 7 NH62_22250 PF00562 RNA polymerase Rpb2, domain 6 NH62_22250 PF10385 RNA polymerase beta subunit external 1 domain NH62_22250 PF04565 RNA polymerase Rpb2, domain 3 NH62_22250 PF04561 RNA polymerase Rpb2, domain 2 NH62_22250 PF04563 RNA polymerase beta subunit NH62_22251 PF16320 Ribosomal protein L7/L12 dimerisation domain NH62_22251 PF00542 Ribosomal protein L7/L12 C-terminal domain NH62_22252 PF00466 Ribosomal protein L10 NH62_22253 PF00687 Ribosomal protein L1p/L10e family NH62_22254 PF03946 Ribosomal protein L11, N-terminal domain NH62_22254 PF00298 Ribosomal protein L11, RNA binding domain NH62_22255 PF02357 Transcription termination factor nusG NH62_22255 PF00467 KOW motif NH62_22256 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NH62_22257 PF00009 Elongation factor Tu GTP binding domain NH62_22257 PF03144 Elongation factor Tu domain 2 NH62_22257 PF03143 Elongation factor Tu C-terminal domain NH62_22262 PF00485 Phosphoribulokinase / Uridine kinase family NH62_22263 PF08279 HTH domain NH62_22263 PF02237 Biotin protein ligase C terminal domain NH62_22263 PF03099 Biotin/lipoate A/B protein ligase family NH62_22264 PF01565 FAD binding domain NH62_22264 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NH62_22266 PF13091 PLD-like domain NH62_22273 PF00175 Oxidoreductase NAD-binding domain NH62_22274 PF00175 Oxidoreductase NAD-binding domain NH62_22274 PF00970 Oxidoreductase FAD-binding domain NH62_22274 PF00111 2Fe-2S iron-sulfur cluster binding domain NH62_22275 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NH62_22277 PF07497 Rho termination factor, RNA-binding domain NH62_22277 PF07498 Rho termination factor, N-terminal domain NH62_22277 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH62_22278 PF00085 Thioredoxin NH62_22279 PF00270 DEAD/DEAH box helicase NH62_22279 PF00271 Helicase conserved C-terminal domain NH62_22280 PF02541 Ppx/GppA phosphatase family NH62_22281 PF00072 Response regulator receiver domain NH62_22281 PF09456 RcsC Alpha-Beta-Loop (ABL) NH62_22281 PF00512 His Kinase A (phospho-acceptor) domain NH62_22281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_22282 PF12832 MFS_1 like family NH62_22285 PF16177 Acetyl-coenzyme A synthetase N-terminus NH62_22285 PF13193 AMP-binding enzyme C-terminal domain NH62_22285 PF00501 AMP-binding enzyme NH62_22286 PF01220 Dehydroquinase class II NH62_22287 PF00364 Biotin-requiring enzyme NH62_22288 PF00289 Biotin carboxylase, N-terminal domain NH62_22288 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NH62_22288 PF02785 Biotin carboxylase C-terminal domain NH62_22290 PF01207 Dihydrouridine synthase (Dus) NH62_22291 PF02954 Bacterial regulatory protein, Fis family NH62_22292 PF02661 Fic/DOC family NH62_22292 PF13784 Fic/DOC family N-terminal NH62_22293 PF00356 Bacterial regulatory proteins, lacI family NH62_22293 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NH62_22294 PF00920 Dehydratase family NH62_22295 PF01202 Shikimate kinase NH62_22296 PF02447 GntP family permease NH62_22297 PF01081 KDPG and KHG aldolase NH62_22298 PF07715 TonB-dependent Receptor Plug Domain NH62_22298 PF00593 TonB dependent receptor NH62_22300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_22300 PF17200 Single Cache domain 2 NH62_22300 PF00672 HAMP domain NH62_22301 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NH62_22301 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NH62_22301 PF01276 Orn/Lys/Arg decarboxylase, major domain NH62_22302 PF13520 Amino acid permease NH62_22303 PF00486 Transcriptional regulatory protein, C terminal NH62_22303 PF18500 CadC C-terminal domain 1 NH62_22304 PF13411 MerR HTH family regulatory protein NH62_22305 PF01808 AICARFT/IMPCHase bienzyme NH62_22305 PF02142 MGS-like domain NH62_22306 PF02843 Phosphoribosylglycinamide synthetase, C domain NH62_22306 PF02844 Phosphoribosylglycinamide synthetase, N domain NH62_22306 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NH62_22308 PF00216 Bacterial DNA-binding protein NH62_22309 PF00571 CBS domain NH62_22309 PF01595 Cyclin M transmembrane N-terminal domain NH62_22310 PF00480 ROK family NH62_22311 PF01238 Phosphomannose isomerase type I NH62_22312 PF04222 Protein of unknown function (DUF416) NH62_22313 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NH62_22314 PF03167 Uracil DNA glycosylase superfamily NH62_22315 PF00924 Mechanosensitive ion channel NH62_22316 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NH62_22316 PF00753 Metallo-beta-lactamase superfamily NH62_22316 PF10996 Beta-Casp domain NH62_22317 PF02397 Bacterial sugar transferase NH62_22318 PF01370 NAD dependent epimerase/dehydratase family NH62_22319 PF02719 Polysaccharide biosynthesis protein NH62_22322 PF01609 Transposase DDE domain NH62_22322 PF13808 DDE_Tnp_1-associated NH62_22323 PF01609 Transposase DDE domain NH62_22323 PF13808 DDE_Tnp_1-associated NH62_22324 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_22326 PF00465 Iron-containing alcohol dehydrogenase NH62_22326 PF00171 Aldehyde dehydrogenase family NH62_22327 PF13193 AMP-binding enzyme C-terminal domain NH62_22327 PF00501 AMP-binding enzyme NH62_22329 PF14524 Wzt C-terminal domain NH62_22329 PF00005 ABC transporter NH62_22332 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NH62_22333 PF16363 GDP-mannose 4,6 dehydratase NH62_22334 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NH62_22334 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NH62_22334 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NH62_22334 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NH62_22335 PF01050 Mannose-6-phosphate isomerase NH62_22335 PF00483 Nucleotidyl transferase NH62_22336 PF01370 NAD dependent epimerase/dehydratase family NH62_22337 PF00457 Glycosyl hydrolases family 11 NH62_22337 PF01522 Polysaccharide deacetylase NH62_22340 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NH62_22342 PF04488 Glycosyltransferase sugar-binding region containing DXD motif NH62_22343 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NH62_22351 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NH62_22352 PF00535 Glycosyl transferase family 2 NH62_22353 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NH62_22354 PF01467 Cytidylyltransferase-like NH62_22355 PF06827 Zinc finger found in FPG and IleRS NH62_22355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NH62_22355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NH62_22357 PF00471 Ribosomal protein L33 NH62_22358 PF00830 Ribosomal L28 family NH62_22359 PF01381 Helix-turn-helix NH62_22361 PF13737 Transposase DDE domain NH62_22370 PF13438 Domain of unknown function (DUF4113) NH62_22370 PF00817 impB/mucB/samB family NH62_22370 PF11799 impB/mucB/samB family C-terminal domain NH62_22370 PF11798 IMS family HHH motif NH62_22371 PF00717 Peptidase S24-like NH62_22378 PF04002 RadC-like JAB domain NH62_22379 PF02743 Cache domain NH62_22379 PF00672 HAMP domain NH62_22379 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_22380 PF02441 Flavoprotein NH62_22380 PF04127 DNA / pantothenate metabolism flavoprotein NH62_22381 PF00440 Bacterial regulatory proteins, tetR family NH62_22382 PF03279 Bacterial lipid A biosynthesis acyltransferase NH62_22383 PF03279 Bacterial lipid A biosynthesis acyltransferase NH62_22384 PF00156 Phosphoribosyl transferase domain NH62_22385 PF03725 3' exoribonuclease family, domain 2 NH62_22385 PF01138 3' exoribonuclease family, domain 1 NH62_22386 PF03755 YicC-like family, N-terminal region NH62_22386 PF08340 Domain of unknown function (DUF1732) NH62_22387 PF03755 YicC-like family, N-terminal region NH62_22387 PF08340 Domain of unknown function (DUF1732) NH62_22388 PF03350 Uncharacterized protein family, UPF0114 NH62_22389 PF00267 Gram-negative porin NH62_22390 PF02378 Phosphotransferase system, EIIC NH62_22390 PF00367 phosphotransferase system, EIIB NH62_22391 PF13580 SIS domain NH62_22392 PF01418 Helix-turn-helix domain, rpiR family NH62_22392 PF01380 SIS domain NH62_22393 PF01032 FecCD transport family NH62_22394 PF01497 Periplasmic binding protein NH62_22395 PF00005 ABC transporter NH62_22396 PF07715 TonB-dependent Receptor Plug Domain NH62_22396 PF00593 TonB dependent receptor NH62_22397 PF00664 ABC transporter transmembrane region NH62_22397 PF00005 ABC transporter NH62_22400 PF00271 Helicase conserved C-terminal domain NH62_22400 PF16124 RecQ zinc-binding NH62_22400 PF09382 RQC domain NH62_22400 PF00570 HRDC domain NH62_22400 PF00270 DEAD/DEAH box helicase NH62_22401 PF00892 EamA-like transporter family NH62_22403 PF12833 Helix-turn-helix domain NH62_22404 PF01810 LysE type translocator NH62_22405 PF13361 UvrD-like helicase C-terminal domain NH62_22405 PF00580 UvrD/REP helicase N-terminal domain NH62_22406 PF01432 Peptidase family M3 NH62_22407 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NH62_22408 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH62_22408 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_22410 PF12911 N-terminal TM domain of oligopeptide transport permease C NH62_22410 PF00528 Binding-protein-dependent transport system inner membrane component NH62_22412 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NH62_22413 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NH62_22413 PF00005 ABC transporter NH62_22419 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NH62_22420 PF00580 UvrD/REP helicase N-terminal domain NH62_22420 PF13361 UvrD-like helicase C-terminal domain NH62_22421 PF00440 Bacterial regulatory proteins, tetR family NH62_22422 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NH62_22423 PF00873 AcrB/AcrD/AcrF family NH62_22424 PF04380 Membrane fusogenic activity NH62_22425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NH62_22425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NH62_22426 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_22426 PF03466 LysR substrate binding domain NH62_22439 PF12724 Flavodoxin domain NH62_22440 PF02386 Cation transport protein NH62_22441 PF09186 Domain of unknown function (DUF1949) NH62_22441 PF01205 Uncharacterized protein family UPF0029 NH62_22442 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NH62_22442 PF00378 Enoyl-CoA hydratase/isomerase NH62_22442 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NH62_22443 PF00108 Thiolase, N-terminal domain NH62_22443 PF02803 Thiolase, C-terminal domain NH62_22444 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_22444 PF03466 LysR substrate binding domain NH62_22445 PF07690 Major Facilitator Superfamily NH62_22446 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_22446 PF12804 MobA-like NTP transferase domain NH62_22447 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NH62_22447 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NH62_22448 PF02874 ATP synthase alpha/beta family, beta-barrel domain NH62_22448 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH62_22449 PF00231 ATP synthase NH62_22450 PF02874 ATP synthase alpha/beta family, beta-barrel domain NH62_22450 PF00306 ATP synthase alpha/beta chain, C terminal domain NH62_22450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NH62_22451 PF00213 ATP synthase delta (OSCP) subunit NH62_22452 PF00430 ATP synthase B/B' CF(0) NH62_22453 PF00137 ATP synthase subunit C NH62_22454 PF00119 ATP synthase A chain NH62_22455 PF03899 ATP synthase I chain NH62_22456 PF17762 HTH domain found in ParB protein NH62_22456 PF02195 ParB-like nuclease domain NH62_22457 PF13614 AAA domain NH62_22458 PF02527 rRNA small subunit methyltransferase G NH62_22459 PF13932 GidA associated domain NH62_22459 PF01134 Glucose inhibited division protein A NH62_22460 PF00258 Flavodoxin NH62_22461 PF10396 GTP-binding protein TrmE N-terminus NH62_22461 PF12631 MnmE helical domain NH62_22461 PF01926 50S ribosome-binding GTPase NH62_22462 PF02096 60Kd inner membrane protein NH62_22462 PF14849 YidC periplasmic domain NH62_22463 PF00825 Ribonuclease P NH62_22464 PF00468 Ribosomal protein L34 NH62_22465 PF00005 ABC transporter NH62_22466 PF00528 Binding-protein-dependent transport system inner membrane component NH62_22467 PF00497 Bacterial extracellular solute-binding proteins, family 3 NH62_22468 PF08299 Bacterial dnaA protein helix-turn-helix NH62_22468 PF00308 Bacterial dnaA protein NH62_22468 PF11638 DnaA N-terminal domain NH62_22469 PF02768 DNA polymerase III beta subunit, C-terminal domain NH62_22469 PF00712 DNA polymerase III beta subunit, N-terminal domain NH62_22469 PF02767 DNA polymerase III beta subunit, central domain NH62_22470 PF02463 RecF/RecN/SMC N terminal domain NH62_22471 PF00986 DNA gyrase B subunit, carboxyl terminus NH62_22471 PF18053 DNA gyrase B subunit insert domain NH62_22471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NH62_22471 PF01751 Toprim domain NH62_22471 PF00204 DNA gyrase B NH62_22474 PF00011 Hsp20/alpha crystallin family NH62_22475 PF00155 Aminotransferase class I and II NH62_22476 PF05746 DALR anticodon binding domain NH62_22476 PF02092 Glycyl-tRNA synthetase beta subunit NH62_22477 PF02091 Glycyl-tRNA synthetase alpha subunit NH62_22478 PF01169 Uncharacterized protein family UPF0016 NH62_22480 PF01206 Sulfurtransferase TusA NH62_22482 PF08240 Alcohol dehydrogenase GroES-like domain NH62_22482 PF00107 Zinc-binding dehydrogenase NH62_22483 PF00585 C-terminal regulatory domain of Threonine dehydratase NH62_22483 PF00291 Pyridoxal-phosphate dependent enzyme NH62_22484 PF00920 Dehydratase family NH62_22485 PF01063 Amino-transferase class IV NH62_22487 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NH62_22487 PF00205 Thiamine pyrophosphate enzyme, central domain NH62_22487 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NH62_22488 PF01078 Magnesium chelatase, subunit ChlI NH62_22488 PF13335 Magnesium chelatase, subunit ChlI C-terminal NH62_22489 PF01553 Acyltransferase NH62_22490 PF01323 DSBA-like thioredoxin domain NH62_22491 PF01636 Phosphotransferase enzyme family NH62_22492 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NH62_22492 PF12801 4Fe-4S binding domain NH62_22492 PF13746 4Fe-4S dicluster domain NH62_22493 PF06288 Protein of unknown function (DUF1040) NH62_22494 PF07070 SpoOM protein NH62_22495 PF03006 Haemolysin-III related NH62_22497 PF02386 Cation transport protein NH62_22498 PF02254 TrkA-N domain NH62_22498 PF02080 TrkA-C domain NH62_22499 PF01189 16S rRNA methyltransferase RsmB/F NH62_22499 PF01029 NusB family NH62_22500 PF02911 Formyl transferase, C-terminal domain NH62_22500 PF00551 Formyl transferase NH62_22501 PF01327 Polypeptide deformylase NH62_22502 PF01476 LysM domain NH62_22503 PF17782 DprA winged helix domain NH62_22503 PF02481 DNA recombination-mediator protein A NH62_22504 PF04361 Protein of unknown function (DUF494) NH62_22505 PF01396 Topoisomerase DNA binding C4 zinc finger NH62_22506 PF02222 ATP-grasp domain NH62_22506 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NH62_22507 PF00731 AIR carboxylase NH62_22508 PF01300 Telomere recombination NH62_22509 PF01218 Coproporphyrinogen III oxidase NH62_22510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NH62_22510 PF08501 Shikimate dehydrogenase substrate binding domain NH62_22510 PF01488 Shikimate / quinate 5-dehydrogenase NH62_22512 PF00132 Bacterial transferase hexapeptide (six repeats) NH62_22519 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NH62_22520 PF01964 Radical SAM ThiC family NH62_22520 PF13667 ThiC-associated domain NH62_22521 PF02581 Thiamine monophosphate synthase NH62_22522 PF00899 ThiF family NH62_22523 PF02597 ThiS family NH62_22524 PF05690 Thiazole biosynthesis protein ThiG NH62_22525 PF04055 Radical SAM superfamily NH62_22525 PF06968 Biotin and Thiamin Synthesis associated domain NH62_22526 PF01321 Creatinase/Prolidase N-terminal domain NH62_22526 PF01321 Creatinase/Prolidase N-terminal domain NH62_22526 PF00557 Metallopeptidase family M24 NH62_22526 PF00557 Metallopeptidase family M24 NH62_22527 PF03466 LysR substrate binding domain NH62_22527 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NH62_22528 PF07690 Major Facilitator Superfamily NH62_22530 PF01037 Lrp/AsnC ligand binding domain NH62_22531 PF08448 PAS fold NH62_22531 PF00990 Diguanylate cyclase, GGDEF domain NH62_22531 PF00563 EAL domain NH62_22532 PF04445 Putative SAM-dependent methyltransferase NH62_22534 PF00892 EamA-like transporter family NH62_22535 PF00582 Universal stress protein family NH62_22536 PF00210 Ferritin-like domain NH62_22537 PF10625 Universal stress protein B (UspB) NH62_22540 PF02646 RmuC family NH62_22541 PF01209 ubiE/COQ5 methyltransferase family NH62_22542 PF02036 SCP-2 sterol transfer family NH62_22543 PF03109 ABC1 family NH62_22544 PF02416 mttA/Hcf106 family NH62_22545 PF02416 mttA/Hcf106 family NH62_22546 PF00902 Sec-independent protein translocase protein (TatC) NH62_22547 PF01554 MatE NH62_22549 PF00717 Peptidase S24-like NH62_22549 PF01726 LexA DNA binding domain NH62_22550 PF01553 Acyltransferase NH62_22551 PF01040 UbiA prenyltransferase family NH62_22552 PF04345 Chorismate lyase NH62_22553 PF03748 Flagellar basal body-associated protein FliL NH62_22554 PF02203 Tar ligand binding domain homologue NH62_22554 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NH62_22554 PF00672 HAMP domain NH62_22555 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NH62_22555 PF01694 Rhomboid family NH62_22556 PF00581 Rhodanese-like domain NH62_22557 PF01026 TatD related DNase NH62_22558 PF00490 Delta-aminolevulinic acid dehydratase NH62_22560 PF00476 DNA polymerase family A NH62_22560 PF01612 3'-5' exonuclease NH62_22560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NH62_22560 PF01367 5'-3' exonuclease, C-terminal SAM fold NH62_22561 PF01926 50S ribosome-binding GTPase NH62_22562 PF00034 Cytochrome c NH62_22564 PF04220 Der GTPase activator (YihI) NH62_22565 PF10675 Protein of unknown function (DUF2489) NH62_22566 PF06969 HemN C-terminal domain NH62_22566 PF04055 Radical SAM superfamily NH62_22567 PF07219 HemY protein N-terminus NH62_22568 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NH62_22569 PF02602 Uroporphyrinogen-III synthase HemD NH62_22570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NH62_22570 PF03900 Porphobilinogen deaminase, C-terminal domain NH62_22571 PF01295 Adenylate cyclase, class-I NH62_22571 PF12633 Adenylate cyclase NT domain NH62_22572 PF01491 Frataxin-like domain NH62_22573 PF01491 Frataxin-like domain NH62_22574 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NH62_22574 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NH62_22575 PF01678 Diaminopimelate epimerase NH62_22576 PF04340 Protein of unknown function, DUF484 NH62_22577 PF00589 Phage integrase family NH62_22577 PF02899 Phage integrase, N-terminal SAM-like domain NH62_22578 PF13419 Haloacid dehalogenase-like hydrolase NH62_22579 PF00990 Diguanylate cyclase, GGDEF domain NH62_22579 PF10442 FIST C domain NH62_22579 PF08495 FIST N domain NH62_22579 PF00563 EAL domain NH62_22583 PF12146 Serine aminopeptidase, S33 NH62_22584 PF01810 LysE type translocator NH62_22585 PF00563 EAL domain NH62_22585 PF08668 HDOD domain NH62_22586 PF00210 Ferritin-like domain NH62_22592 PF00448 SRP54-type protein, GTPase domain NH62_22592 PF02881 SRP54-type protein, helical bundle domain NH62_22593 PF00005 ABC transporter NH62_22594 PF18075 FtsX extracellular domain NH62_22595 PF04542 Sigma-70 region 2 NH62_22595 PF00140 Sigma-70 factor, region 1.2 NH62_22595 PF04545 Sigma-70, region 4 NH62_22596 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NH62_22596 PF07992 Pyridine nucleotide-disulphide oxidoreductase NH62_22597 PF00440 Bacterial regulatory proteins, tetR family NH62_22599 PF05958 tRNA (Uracil-5-)-methyltransferase NH62_22600 PF07715 TonB-dependent Receptor Plug Domain NH62_22600 PF00593 TonB dependent receptor NH62_22601 PF04151 Bacterial pre-peptidase C-terminal domain NH62_22601 PF05922 Peptidase inhibitor I9 NH62_22601 PF00082 Subtilase family NH62_22602 PF01177 Asp/Glu/Hydantoin racemase NH62_22615 PF00999 Sodium/hydrogen exchanger family NH62_22616 PF00809 Pterin binding enzyme NH62_22616 PF02965 Vitamin B12 dependent methionine synthase, activation domain NH62_22616 PF02607 B12 binding domain NH62_22616 PF02310 B12 binding domain NH62_22616 PF02574 Homocysteine S-methyltransferase NH62_22617 PF00696 Amino acid kinase family NH62_22617 PF01842 ACT domain NH62_22618 PF00266 Aminotransferase class-V NH62_22620 PF17760 UvrA interaction domain NH62_22620 PF17755 UvrA DNA-binding domain NH62_22620 PF00005 ABC transporter NH62_22621 PF00483 Nucleotidyl transferase NH62_22622 PF00196 Bacterial regulatory proteins, luxR family NH62_22623 PF00436 Single-strand binding protein family NH62_22624 PF00563 EAL domain NH62_22624 PF17157 Gammaproteobacterial periplasmic sensor domain NH62_22624 PF00990 Diguanylate cyclase, GGDEF domain NH62_22628 PF11741 AMIN domain NH62_22628 PF00263 Bacterial type II and III secretion system protein NH62_22628 PF03958 Bacterial type II/III secretion system short domain NH62_22628 PF07660 Secretin and TonB N terminus short domain NH62_22629 PF13401 AAA domain NH62_22629 PF01471 Putative peptidoglycan binding domain NH62_22631 PF00437 Type II/IV secretion system protein NH62_22632 PF00482 Type II secretion system (T2SS), protein F NH62_22635 PF00114 Pilin (bacterial filament) NH62_22635 PF07963 Prokaryotic N-terminal methylation motif NH62_22642 PF04085 rod shape-determining protein MreC NH62_22643 PF04093 rod shape-determining protein MreD NH62_22644 PF02545 Maf-like protein NH62_22645 PF00575 S1 RNA binding domain NH62_22645 PF10150 Ribonuclease E/G family NH62_22646 PF13502 AsmA-like C-terminal region NH62_22646 PF13116 Protein of unknown function NH62_22647 PF00795 Carbon-nitrogen hydrolase NH62_22648 PF01523 Putative modulator of DNA gyrase NH62_22650 PF06877 Regulator of ribonuclease activity B NH62_22653 PF00582 Universal stress protein family NH62_22655 PF16868 NMT1-like family NH62_22656 PF02863 Arginine repressor, C-terminal domain NH62_22656 PF01316 Arginine repressor, DNA binding domain NH62_22657 PF00056 lactate/malate dehydrogenase, NAD binding domain NH62_22657 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NH62_22658 PF13520 Amino acid permease NH62_22659 PF00348 Polyprenyl synthetase NH62_22660 PF00829 Ribosomal prokaryotic L21 protein NH62_22661 PF01016 Ribosomal L27 protein NH62_22662 PF01926 50S ribosome-binding GTPase NH62_22662 PF01018 GTP1/OBG NH62_22663 PF06738 Putative threonine/serine exporter NH62_22664 PF12821 Threonine/Serine exporter, ThrE NH62_22665 PF00186 Dihydrofolate reductase NH62_22666 PF00149 Calcineurin-like phosphoesterase NH62_22667 PF04379 ApaG domain NH62_22668 PF00398 Ribosomal RNA adenine dimethylase NH62_22669 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NH62_22670 PF09312 SurA N-terminal domain NH62_22671 PF04453 LPS transport system D NH62_22671 PF03968 OstA-like protein NH62_22672 PF05099 Tellurite resistance protein TerB NH62_22672 PF00226 DnaJ domain NH62_22678 PF12729 Four helix bundle sensory module for signal transduction NH62_22678 PF00672 HAMP domain NH62_22678 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain