locus-tag class description BBB50_00005 PF00308 Bacterial dnaA protein BBB50_00005 PF08299 Bacterial dnaA protein helix-turn-helix BBB50_00005 PF11638 DnaA N-terminal domain BBB50_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BBB50_00010 PF02767 DNA polymerase III beta subunit, central domain BBB50_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BBB50_00015 PF02463 RecF/RecN/SMC N terminal domain BBB50_00020 PF00204 DNA gyrase B BBB50_00020 PF18053 DNA gyrase B subunit insert domain BBB50_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_00020 PF01751 Toprim domain BBB50_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BBB50_00035 PF00011 Hsp20/alpha crystallin family BBB50_00040 PF00155 Aminotransferase class I and II BBB50_00045 PF05746 DALR anticodon binding domain BBB50_00045 PF02092 Glycyl-tRNA synthetase beta subunit BBB50_00050 PF02091 Glycyl-tRNA synthetase alpha subunit BBB50_00055 PF01169 Uncharacterized protein family UPF0016 BBB50_00065 PF01206 Sulfurtransferase TusA BBB50_00075 PF08240 Alcohol dehydrogenase GroES-like domain BBB50_00075 PF00107 Zinc-binding dehydrogenase BBB50_00080 PF00585 C-terminal regulatory domain of Threonine dehydratase BBB50_00080 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_00085 PF00920 Dehydratase family BBB50_00090 PF01063 Amino-transferase class IV BBB50_00100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBB50_00100 PF00205 Thiamine pyrophosphate enzyme, central domain BBB50_00100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBB50_00105 PF01078 Magnesium chelatase, subunit ChlI BBB50_00105 PF13335 Magnesium chelatase, subunit ChlI C-terminal BBB50_00110 PF01553 Acyltransferase BBB50_00115 PF01323 DSBA-like thioredoxin domain BBB50_00120 PF01636 Phosphotransferase enzyme family BBB50_00125 PF12801 4Fe-4S binding domain BBB50_00125 PF13746 4Fe-4S dicluster domain BBB50_00125 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BBB50_00130 PF06288 Protein of unknown function (DUF1040) BBB50_00140 PF07070 SpoOM protein BBB50_00145 PF03006 Haemolysin-III related BBB50_00155 PF02386 Cation transport protein BBB50_00160 PF02080 TrkA-C domain BBB50_00160 PF02254 TrkA-N domain BBB50_00165 PF01029 NusB family BBB50_00165 PF01189 16S rRNA methyltransferase RsmB/F BBB50_00170 PF02911 Formyl transferase, C-terminal domain BBB50_00170 PF00551 Formyl transferase BBB50_00175 PF01327 Polypeptide deformylase BBB50_00180 PF01476 LysM domain BBB50_00185 PF17782 DprA winged helix domain BBB50_00185 PF02481 DNA recombination-mediator protein A BBB50_00190 PF04361 Protein of unknown function (DUF494) BBB50_00195 PF01396 Topoisomerase DNA binding C4 zinc finger BBB50_00200 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BBB50_00200 PF02222 ATP-grasp domain BBB50_00205 PF00731 AIR carboxylase BBB50_00210 PF01300 Telomere recombination BBB50_00215 PF01218 Coproporphyrinogen III oxidase BBB50_00220 PF01488 Shikimate / quinate 5-dehydrogenase BBB50_00220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BBB50_00220 PF08501 Shikimate dehydrogenase substrate binding domain BBB50_00230 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_00275 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBB50_00280 PF13667 ThiC-associated domain BBB50_00280 PF01964 Radical SAM ThiC family BBB50_00285 PF02581 Thiamine monophosphate synthase BBB50_00290 PF00899 ThiF family BBB50_00295 PF02597 ThiS family BBB50_00300 PF05690 Thiazole biosynthesis protein ThiG BBB50_00305 PF06968 Biotin and Thiamin Synthesis associated domain BBB50_00305 PF04055 Radical SAM superfamily BBB50_00310 PF00557 Metallopeptidase family M24 BBB50_00310 PF01321 Creatinase/Prolidase N-terminal domain BBB50_00310 PF00557 Metallopeptidase family M24 BBB50_00310 PF01321 Creatinase/Prolidase N-terminal domain BBB50_00315 PF03466 LysR substrate binding domain BBB50_00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_00320 PF07690 Major Facilitator Superfamily BBB50_00330 PF01037 Lrp/AsnC ligand binding domain BBB50_00335 PF08448 PAS fold BBB50_00335 PF00990 Diguanylate cyclase, GGDEF domain BBB50_00335 PF00563 EAL domain BBB50_00340 PF04445 Putative SAM-dependent methyltransferase BBB50_00350 PF00892 EamA-like transporter family BBB50_00355 PF00582 Universal stress protein family BBB50_00365 PF00210 Ferritin-like domain BBB50_00370 PF10625 Universal stress protein B (UspB) BBB50_00385 PF02646 RmuC family BBB50_00390 PF01209 ubiE/COQ5 methyltransferase family BBB50_00395 PF02036 SCP-2 sterol transfer family BBB50_00400 PF03109 ABC1 family BBB50_00405 PF02416 mttA/Hcf106 family BBB50_00410 PF02416 mttA/Hcf106 family BBB50_00415 PF00902 Sec-independent protein translocase protein (TatC) BBB50_00420 PF03150 Di-haem cytochrome c peroxidase BBB50_00420 PF00034 Cytochrome c BBB50_00425 PF01554 MatE BBB50_00435 PF00717 Peptidase S24-like BBB50_00435 PF01726 LexA DNA binding domain BBB50_00440 PF01553 Acyltransferase BBB50_00445 PF01040 UbiA prenyltransferase family BBB50_00450 PF04345 Chorismate lyase BBB50_00460 PF03748 Flagellar basal body-associated protein FliL BBB50_00465 PF02203 Tar ligand binding domain homologue BBB50_00465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_00465 PF00672 HAMP domain BBB50_00470 PF01694 Rhomboid family BBB50_00470 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BBB50_00475 PF00581 Rhodanese-like domain BBB50_00485 PF01026 TatD related DNase BBB50_00490 PF00490 Delta-aminolevulinic acid dehydratase BBB50_00500 PF01612 3'-5' exonuclease BBB50_00500 PF01367 5'-3' exonuclease, C-terminal SAM fold BBB50_00500 PF00476 DNA polymerase family A BBB50_00500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BBB50_00505 PF01926 50S ribosome-binding GTPase BBB50_00510 PF00034 Cytochrome c BBB50_00520 PF04220 Der GTPase activator (YihI) BBB50_00525 PF10675 Protein of unknown function (DUF2489) BBB50_00530 PF06969 HemN C-terminal domain BBB50_00530 PF04055 Radical SAM superfamily BBB50_00535 PF07219 HemY protein N-terminus BBB50_00540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BBB50_00545 PF02602 Uroporphyrinogen-III synthase HemD BBB50_00550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BBB50_00550 PF03900 Porphobilinogen deaminase, C-terminal domain BBB50_00560 PF01295 Adenylate cyclase, class-I BBB50_00560 PF12633 Adenylate cyclase NT domain BBB50_00565 PF01491 Frataxin-like domain BBB50_00575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BBB50_00575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BBB50_00580 PF01678 Diaminopimelate epimerase BBB50_00585 PF04340 Protein of unknown function, DUF484 BBB50_00590 PF02899 Phage integrase, N-terminal SAM-like domain BBB50_00590 PF00589 Phage integrase family BBB50_00595 PF13419 Haloacid dehalogenase-like hydrolase BBB50_00600 PF00563 EAL domain BBB50_00600 PF08495 FIST N domain BBB50_00600 PF10442 FIST C domain BBB50_00600 PF00990 Diguanylate cyclase, GGDEF domain BBB50_00625 PF12146 Serine aminopeptidase, S33 BBB50_00630 PF01810 LysE type translocator BBB50_00635 PF08668 HDOD domain BBB50_00635 PF00563 EAL domain BBB50_00640 PF00210 Ferritin-like domain BBB50_00680 PF00448 SRP54-type protein, GTPase domain BBB50_00680 PF02881 SRP54-type protein, helical bundle domain BBB50_00685 PF00005 ABC transporter BBB50_00690 PF18075 FtsX extracellular domain BBB50_00695 PF04545 Sigma-70, region 4 BBB50_00695 PF04542 Sigma-70 region 2 BBB50_00695 PF00140 Sigma-70 factor, region 1.2 BBB50_00700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_00700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBB50_00705 PF00440 Bacterial regulatory proteins, tetR family BBB50_00715 PF05958 tRNA (Uracil-5-)-methyltransferase BBB50_00720 PF07715 TonB-dependent Receptor Plug Domain BBB50_00720 PF00593 TonB dependent receptor BBB50_00725 PF00082 Subtilase family BBB50_00725 PF05922 Peptidase inhibitor I9 BBB50_00725 PF04151 Bacterial pre-peptidase C-terminal domain BBB50_00730 PF01177 Asp/Glu/Hydantoin racemase BBB50_00805 PF00962 Adenosine/AMP deaminase BBB50_00810 PF13188 PAS domain BBB50_00810 PF03707 Bacterial signalling protein N terminal repeat BBB50_00810 PF00990 Diguanylate cyclase, GGDEF domain BBB50_00810 PF00563 EAL domain BBB50_00815 PF00158 Sigma-54 interaction domain BBB50_00815 PF00072 Response regulator receiver domain BBB50_00815 PF02954 Bacterial regulatory protein, Fis family BBB50_00820 PF00989 PAS fold BBB50_00820 PF00512 His Kinase A (phospho-acceptor) domain BBB50_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_00830 PF00120 Glutamine synthetase, catalytic domain BBB50_00830 PF03951 Glutamine synthetase, beta-Grasp domain BBB50_00850 PF03631 Virulence factor BrkB BBB50_00855 PF02580 D-Tyr-tRNA(Tyr) deacylase BBB50_00860 PF00583 Acetyltransferase (GNAT) family BBB50_00860 PF09500 Putative thioesterase (yiiD_Cterm) BBB50_00870 PF01293 Phosphoenolpyruvate carboxykinase BBB50_00875 PF01430 Hsp33 protein BBB50_00880 PF01479 S4 domain BBB50_00885 PF11356 Type II secretion system protein C BBB50_00890 PF03958 Bacterial type II/III secretion system short domain BBB50_00890 PF00263 Bacterial type II and III secretion system protein BBB50_00895 PF00437 Type II/IV secretion system protein BBB50_00900 PF00482 Type II secretion system (T2SS), protein F BBB50_00905 PF07963 Prokaryotic N-terminal methylation motif BBB50_00905 PF08334 Type II secretion system (T2SS), protein G BBB50_00910 PF12019 Type II transport protein GspH BBB50_00915 PF02501 Type II secretion system (T2SS), protein I BBB50_00915 PF07963 Prokaryotic N-terminal methylation motif BBB50_00920 PF07963 Prokaryotic N-terminal methylation motif BBB50_00920 PF11612 Type II secretion system (T2SS), protein J BBB50_00925 PF03934 Type II secretion system (T2SS), protein K BBB50_00930 PF12693 GspL periplasmic domain BBB50_00930 PF05134 Type II secretion system (T2SS), protein L BBB50_00935 PF04612 Type II secretion system (T2SS), protein M BBB50_00940 PF01203 Type II secretion system (T2SS), protein N BBB50_00945 PF00459 Inositol monophosphatase family BBB50_00950 PF00293 NUDIX domain BBB50_00955 PF01521 Iron-sulphur cluster biosynthesis BBB50_00955 PF01106 NifU-like domain BBB50_00960 PF00156 Phosphoribosyl transferase domain BBB50_00965 PF00561 alpha/beta hydrolase fold BBB50_00975 PF17674 HHH domain BBB50_00975 PF00575 S1 RNA binding domain BBB50_00975 PF16921 Tex protein YqgF-like domain BBB50_00975 PF09371 Tex-like protein N-terminal domain BBB50_00980 PF01272 Transcription elongation factor, GreA/GreB, C-term BBB50_00980 PF03449 Transcription elongation factor, N-terminal BBB50_00985 PF00486 Transcriptional regulatory protein, C terminal BBB50_00985 PF00072 Response regulator receiver domain BBB50_00990 PF00672 HAMP domain BBB50_00990 PF00512 His Kinase A (phospho-acceptor) domain BBB50_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_00995 PF00860 Permease family BBB50_01000 PF17191 RecG wedge domain BBB50_01000 PF00270 DEAD/DEAH box helicase BBB50_01000 PF00271 Helicase conserved C-terminal domain BBB50_01005 PF04607 Region found in RelA / SpoT proteins BBB50_01005 PF13291 ACT domain BBB50_01005 PF02824 TGS domain BBB50_01010 PF01192 RNA polymerase Rpb6 BBB50_01015 PF00625 Guanylate kinase BBB50_01020 PF02592 Putative vitamin uptake transporter BBB50_01025 PF00474 Sodium:solute symporter family BBB50_01035 PF03471 Transporter associated domain BBB50_01035 PF00999 Sodium/hydrogen exchanger family BBB50_01035 PF02080 TrkA-C domain BBB50_01040 PF00196 Bacterial regulatory proteins, luxR family BBB50_01040 PF00072 Response regulator receiver domain BBB50_01045 PF02683 Cytochrome C biogenesis protein transmembrane region BBB50_01045 PF11412 Disulphide bond corrector protein DsbC BBB50_01050 PF17967 Pullulanase N2 domain BBB50_01050 PF11852 Domain of unknown function (DUF3372) BBB50_01050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBB50_01050 PF03714 Bacterial pullanase-associated domain BBB50_01050 PF18494 Pullulanase Ins domain BBB50_01060 PF03605 Anaerobic c4-dicarboxylate membrane transporter BBB50_01065 PF00206 Lyase BBB50_01065 PF10415 Fumarase C C-terminus BBB50_01070 PF17158 Membrane-associated sensor, integral membrane domain BBB50_01070 PF00990 Diguanylate cyclase, GGDEF domain BBB50_01075 PF04186 FxsA cytoplasmic membrane protein BBB50_01080 PF00588 SpoU rRNA Methylase family BBB50_01085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BBB50_01085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BBB50_01090 PF00512 His Kinase A (phospho-acceptor) domain BBB50_01090 PF00672 HAMP domain BBB50_01090 PF16527 Two-component sensor protein CpxA, periplasmic domain BBB50_01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_01095 PF00072 Response regulator receiver domain BBB50_01095 PF00486 Transcriptional regulatory protein, C terminal BBB50_01105 PF01545 Cation efflux family BBB50_01105 PF16916 Dimerisation domain of Zinc Transporter BBB50_01110 PF00365 Phosphofructokinase BBB50_01115 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BBB50_01120 PF06005 Cell division protein ZapB BBB50_01125 PF02219 Methylenetetrahydrofolate reductase BBB50_01130 PF00696 Amino acid kinase family BBB50_01130 PF00742 Homoserine dehydrogenase BBB50_01130 PF03447 Homoserine dehydrogenase, NAD binding domain BBB50_01135 PF01053 Cys/Met metabolism PLP-dependent enzyme BBB50_01140 PF01340 Met Apo-repressor, MetJ BBB50_01145 PF00390 Malic enzyme, N-terminal domain BBB50_01145 PF03949 Malic enzyme, NAD binding domain BBB50_01150 PF01197 Ribosomal protein L31 BBB50_01155 PF00270 DEAD/DEAH box helicase BBB50_01155 PF00271 Helicase conserved C-terminal domain BBB50_01155 PF17764 3′ DNA-binding domain (3′BD) BBB50_01155 PF18074 Primosomal protein N C-terminal domain BBB50_01155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BBB50_01160 PF00356 Bacterial regulatory proteins, lacI family BBB50_01165 PF05036 Sporulation related domain BBB50_01170 PF00227 Proteasome subunit BBB50_01175 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_01175 PF10431 C-terminal, D2-small domain, of ClpB protein BBB50_01175 PF07724 AAA domain (Cdc48 subfamily) BBB50_01180 PF01040 UbiA prenyltransferase family BBB50_01185 PF03737 Aldolase/RraA BBB50_01195 PF00121 Triosephosphate isomerase BBB50_01215 PF00455 DeoR C terminal sensor domain BBB50_01215 PF08220 DeoR-like helix-turn-helix domain BBB50_01220 PF00166 Chaperonin 10 Kd subunit BBB50_01225 PF00118 TCP-1/cpn60 chaperonin family BBB50_01235 PF04055 Radical SAM superfamily BBB50_01240 PF09285 Elongation factor P, C-terminal BBB50_01240 PF08207 Elongation factor P (EF-P) KOW-like domain BBB50_01240 PF01132 Elongation factor P (EF-P) OB domain BBB50_01245 PF02313 Fumarate reductase subunit D BBB50_01250 PF02300 Fumarate reductase subunit C BBB50_01255 PF13085 2Fe-2S iron-sulfur cluster binding domain BBB50_01255 PF13183 4Fe-4S dicluster domain BBB50_01260 PF02910 Fumarate reductase flavoprotein C-term BBB50_01260 PF00890 FAD binding domain BBB50_01265 PF00152 tRNA synthetases class II (D, K and N) BBB50_01270 PF00581 Rhodanese-like domain BBB50_01275 PF02556 Preprotein translocase subunit SecB BBB50_01280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BBB50_01280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BBB50_01285 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_01285 PF06426 Serine acetyltransferase, N-terminal BBB50_01295 PF00311 Phosphoenolpyruvate carboxylase BBB50_01300 PF07687 Peptidase dimerisation domain BBB50_01300 PF01546 Peptidase family M20/M25/M40 BBB50_01305 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBB50_01305 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBB50_01310 PF00696 Amino acid kinase family BBB50_01315 PF00764 Arginosuccinate synthase BBB50_01320 PF00206 Lyase BBB50_01320 PF14698 Argininosuccinate lyase C-terminal BBB50_01330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBB50_01330 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_01335 PF08534 Redoxin BBB50_01335 PF00462 Glutaredoxin BBB50_01340 PF03466 LysR substrate binding domain BBB50_01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_01345 PF00905 Penicillin binding protein transpeptidase domain BBB50_01345 PF17092 Penicillin-binding protein OB-like domain BBB50_01345 PF00912 Transglycosylase BBB50_01365 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) BBB50_01370 PF04865 Baseplate J-like protein BBB50_01380 PF06890 Bacteriophage Mu Gp45 protein BBB50_01415 PF17482 Phage tail sheath C-terminal domain BBB50_01415 PF04984 Phage tail sheath protein subtilisin-like domain BBB50_01435 PF07030 Protein of unknown function (DUF1320) BBB50_01445 PF10124 Mu-like prophage major head subunit gpT BBB50_01480 PF06074 Protein of unknown function (DUF935) BBB50_01485 PF03237 Terminase-like family BBB50_01490 PF11985 Protein of unknown function (DUF3486) BBB50_01495 PF08461 Ribonuclease R winged-helix domain BBB50_01610 PF09077 Mu B transposition protein, C terminal BBB50_01610 PF13401 AAA domain BBB50_01615 PF09299 Mu transposase, C-terminal BBB50_01615 PF09039 Mu DNA binding, I gamma subdomain BBB50_01615 PF02316 Mu DNA-binding domain BBB50_01615 PF02914 Bacteriophage Mu transposase BBB50_01620 PF13693 Winged helix-turn-helix DNA-binding BBB50_01650 PF11741 AMIN domain BBB50_01650 PF07660 Secretin and TonB N terminus short domain BBB50_01650 PF00263 Bacterial type II and III secretion system protein BBB50_01650 PF03958 Bacterial type II/III secretion system short domain BBB50_01655 PF01202 Shikimate kinase BBB50_01660 PF01761 3-dehydroquinate synthase BBB50_01670 PF02086 D12 class N6 adenine-specific DNA methyltransferase BBB50_01675 PF00834 Ribulose-phosphate 3 epimerase family BBB50_01680 PF13419 Haloacid dehalogenase-like hydrolase BBB50_01685 PF00579 tRNA synthetases class I (W and Y) BBB50_01700 PF04055 Radical SAM superfamily BBB50_01700 PF00919 Uncharacterized protein family UPF0004 BBB50_01700 PF18693 TRAM domain BBB50_01705 PF00117 Glutamine amidotransferase class-I BBB50_01710 PF00202 Aminotransferase class-III BBB50_01715 PF04958 Arginine N-succinyltransferase beta subunit BBB50_01720 PF00171 Aldehyde dehydrogenase family BBB50_01730 PF00027 Cyclic nucleotide-binding domain BBB50_01730 PF13545 Crp-like helix-turn-helix domain BBB50_01735 PF00485 Phosphoribulokinase / Uridine kinase family BBB50_01740 PF06794 Uncharacterised protein family (UPF0270) BBB50_01745 PF00561 alpha/beta hydrolase fold BBB50_01755 PF12848 ABC transporter BBB50_01755 PF00005 ABC transporter BBB50_01760 PF02525 Flavodoxin-like fold BBB50_01765 PF00999 Sodium/hydrogen exchanger family BBB50_01765 PF02254 TrkA-N domain BBB50_01775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBB50_01780 PF01112 Asparaginase BBB50_01785 PF00709 Adenylosuccinate synthetase BBB50_01790 PF08238 Sel1 repeat BBB50_01795 PF00884 Sulfatase BBB50_01795 PF11893 Domain of unknown function (DUF3413) BBB50_01800 PF00773 RNB domain BBB50_01800 PF00575 S1 RNA binding domain BBB50_01800 PF08206 Ribonuclease B OB domain BBB50_01800 PF08461 Ribonuclease R winged-helix domain BBB50_01800 PF17876 Cold shock domain BBB50_01805 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBB50_01805 PF00588 SpoU rRNA Methylase family BBB50_01810 PF00338 Ribosomal protein S10p/S20e BBB50_01815 PF00297 Ribosomal protein L3 BBB50_01820 PF00573 Ribosomal protein L4/L1 family BBB50_01825 PF00276 Ribosomal protein L23 BBB50_01830 PF03947 Ribosomal Proteins L2, C-terminal domain BBB50_01830 PF00181 Ribosomal Proteins L2, RNA binding domain BBB50_01835 PF00203 Ribosomal protein S19 BBB50_01840 PF00237 Ribosomal protein L22p/L17e BBB50_01845 PF00189 Ribosomal protein S3, C-terminal domain BBB50_01845 PF07650 KH domain BBB50_01850 PF00252 Ribosomal protein L16p/L10e BBB50_01855 PF00831 Ribosomal L29 protein BBB50_01860 PF00366 Ribosomal protein S17 BBB50_01865 PF00238 Ribosomal protein L14p/L23e BBB50_01870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BBB50_01870 PF00467 KOW motif BBB50_01875 PF00281 Ribosomal protein L5 BBB50_01875 PF00673 ribosomal L5P family C-terminus BBB50_01880 PF00253 Ribosomal protein S14p/S29e BBB50_01885 PF00410 Ribosomal protein S8 BBB50_01890 PF00347 Ribosomal protein L6 BBB50_01895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BBB50_01900 PF00333 Ribosomal protein S5, N-terminal domain BBB50_01900 PF03719 Ribosomal protein S5, C-terminal domain BBB50_01905 PF00327 Ribosomal protein L30p/L7e BBB50_01910 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BBB50_01915 PF00344 SecY translocase BBB50_01920 PF00444 Ribosomal protein L36 BBB50_01925 PF00416 Ribosomal protein S13/S18 BBB50_01930 PF00411 Ribosomal protein S11 BBB50_01935 PF01479 S4 domain BBB50_01935 PF00163 Ribosomal protein S4/S9 N-terminal domain BBB50_01940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BBB50_01940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BBB50_01940 PF01000 RNA polymerase Rpb3/RpoA insert domain BBB50_01945 PF01196 Ribosomal protein L17 BBB50_01955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBB50_01955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BBB50_01960 PF04225 Opacity-associated protein A LysM-like domain BBB50_01960 PF08525 Opacity-associated protein A N-terminal motif BBB50_01965 PF00892 EamA-like transporter family BBB50_01970 PF13673 Acetyltransferase (GNAT) domain BBB50_01975 PF03880 DbpA RNA binding domain BBB50_01975 PF00270 DEAD/DEAH box helicase BBB50_01975 PF00271 Helicase conserved C-terminal domain BBB50_01985 PF00149 Calcineurin-like phosphoesterase BBB50_01985 PF02872 5'-nucleotidase, C-terminal domain BBB50_01990 PF10414 Sirohaem synthase dimerisation region BBB50_01990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBB50_01990 PF14824 Sirohaem biosynthesis protein central BBB50_01995 PF01507 Phosphoadenosine phosphosulfate reductase family BBB50_02000 PF00009 Elongation factor Tu GTP binding domain BBB50_02025 PF00005 ABC transporter BBB50_02035 PF10795 Protein of unknown function (DUF2607) BBB50_02040 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BBB50_02045 PF01625 Peptide methionine sulfoxide reductase BBB50_02050 PF07244 Surface antigen variable number repeat BBB50_02050 PF17243 POTRA domain TamA domain 1 BBB50_02050 PF01103 Surface antigen BBB50_02055 PF04357 TamB, inner membrane protein subunit of TAM complex BBB50_02060 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BBB50_02065 PF00719 Inorganic pyrophosphatase BBB50_02070 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BBB50_02080 PF01225 Mur ligase family, catalytic domain BBB50_02080 PF02875 Mur ligase family, glutamate ligase domain BBB50_02080 PF08245 Mur ligase middle domain BBB50_02085 PF02441 Flavoprotein BBB50_02095 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_02100 PF00005 ABC transporter BBB50_02105 PF04751 Protein of unknown function (DUF615) BBB50_02110 PF01523 Putative modulator of DNA gyrase BBB50_02115 PF03448 MgtE intracellular N domain BBB50_02115 PF01769 Divalent cation transporter BBB50_02115 PF00571 CBS domain BBB50_02120 PF00381 PTS HPr component phosphorylation site BBB50_02125 PF03668 P-loop ATPase protein family BBB50_02130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBB50_02135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BBB50_02140 PF00309 Sigma-54 factor, Activator interacting domain (AID) BBB50_02140 PF04552 Sigma-54, DNA binding domain BBB50_02140 PF04963 Sigma-54 factor, core binding domain BBB50_02145 PF00005 ABC transporter BBB50_02145 PF12399 Branched-chain amino acid ATP-binding cassette transporter BBB50_02150 PF03968 OstA-like protein BBB50_02165 PF00571 CBS domain BBB50_02165 PF01380 SIS domain BBB50_02170 PF01699 Sodium/calcium exchanger protein BBB50_02180 PF00005 ABC transporter BBB50_02185 PF02405 Permease MlaE BBB50_02190 PF02470 MlaD protein BBB50_02195 PF05494 MlaC protein BBB50_02205 PF01722 BolA-like protein BBB50_02210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBB50_02215 PF01553 Acyltransferase BBB50_02220 PF01042 Endoribonuclease L-PSP BBB50_02225 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BBB50_02225 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BBB50_02230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBB50_02230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBB50_02240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBB50_02240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBB50_02245 PF13638 PIN domain BBB50_02245 PF02562 PhoH-like protein BBB50_02255 PF00271 Helicase conserved C-terminal domain BBB50_02255 PF18337 RapA N-terminal Tudor like domain BBB50_02255 PF18339 RapA N-terminal Tudor like domain 1 BBB50_02255 PF12137 RNA polymerase recycling family C-terminal BBB50_02255 PF00176 SNF2 family N-terminal domain BBB50_02260 PF00849 RNA pseudouridylate synthase BBB50_02265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBB50_02265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBB50_02270 PF00133 tRNA synthetases class I (I, L, M and V) BBB50_02270 PF08264 Anticodon-binding domain of tRNA BBB50_02270 PF10458 Valyl tRNA synthetase tRNA binding arm BBB50_02275 PF04364 DNA polymerase III chi subunit, HolC BBB50_02280 PF02789 Cytosol aminopeptidase family, N-terminal domain BBB50_02280 PF00883 Cytosol aminopeptidase family, catalytic domain BBB50_02285 PF03739 Lipopolysaccharide export system permease LptF/LptG BBB50_02290 PF03739 Lipopolysaccharide export system permease LptF/LptG BBB50_02305 PF00072 Response regulator receiver domain BBB50_02350 PF00694 Aconitase C-terminal domain BBB50_02355 PF00330 Aconitase family (aconitate hydratase) BBB50_02360 PF00180 Isocitrate/isopropylmalate dehydrogenase BBB50_02365 PF08502 LeuA allosteric (dimerisation) domain BBB50_02365 PF00682 HMGL-like BBB50_02375 PF01569 PAP2 superfamily BBB50_02385 PF03466 LysR substrate binding domain BBB50_02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_02390 PF00501 AMP-binding enzyme BBB50_02395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBB50_02395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBB50_02395 PF00205 Thiamine pyrophosphate enzyme, central domain BBB50_02400 PF10369 Small subunit of acetolactate synthase BBB50_02405 PF01842 ACT domain BBB50_02405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBB50_02405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBB50_02410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BBB50_02415 PF01812 5-formyltetrahydrofolate cyclo-ligase family BBB50_02425 PF05164 Cell division protein ZapA BBB50_02430 PF03695 Uncharacterised protein family (UPF0149) BBB50_02435 PF01494 FAD binding domain BBB50_02440 PF01494 FAD binding domain BBB50_02455 PF03937 Flavinator of succinate dehydrogenase BBB50_02465 PF00890 FAD binding domain BBB50_02465 PF02910 Fumarate reductase flavoprotein C-term BBB50_02475 PF04542 Sigma-70 region 2 BBB50_02475 PF08281 Sigma-70, region 4 BBB50_02480 PF03873 Anti sigma-E protein RseA, C-terminal domain BBB50_02480 PF03872 Anti sigma-E protein RseA, N-terminal domain BBB50_02485 PF03888 MucB/RseB N-terminal domain BBB50_02485 PF17188 MucB/RseB C-terminal domain BBB50_02495 PF03144 Elongation factor Tu domain 2 BBB50_02495 PF06421 GTP-binding protein LepA C-terminus BBB50_02495 PF00679 Elongation factor G C-terminus BBB50_02495 PF00009 Elongation factor Tu GTP binding domain BBB50_02500 PF10502 Signal peptidase, peptidase S26 BBB50_02505 PF00035 Double-stranded RNA binding motif BBB50_02505 PF14622 Ribonuclease-III-like BBB50_02510 PF07650 KH domain BBB50_02510 PF01926 50S ribosome-binding GTPase BBB50_02515 PF02565 Recombination protein O C terminal BBB50_02515 PF11967 Recombination protein O N terminal BBB50_02520 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BBB50_02525 PF01648 4'-phosphopantetheinyl transferase superfamily BBB50_02540 PF00990 Diguanylate cyclase, GGDEF domain BBB50_02540 PF00563 EAL domain BBB50_02545 PF01627 Hpt domain BBB50_02545 PF00672 HAMP domain BBB50_02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_02545 PF00512 His Kinase A (phospho-acceptor) domain BBB50_02545 PF00072 Response regulator receiver domain BBB50_02545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BBB50_02550 PF05958 tRNA (Uracil-5-)-methyltransferase BBB50_02550 PF01938 TRAM domain BBB50_02555 PF02824 TGS domain BBB50_02555 PF04607 Region found in RelA / SpoT proteins BBB50_02555 PF13291 ACT domain BBB50_02560 PF03819 MazG nucleotide pyrophosphohydrolase domain BBB50_02565 PF06418 CTP synthase N-terminus BBB50_02565 PF00117 Glutamine amidotransferase class-I BBB50_02570 PF03952 Enolase, N-terminal domain BBB50_02570 PF00113 Enolase, C-terminal TIM barrel domain BBB50_02575 PF01743 Poly A polymerase head domain BBB50_02575 PF12627 Probable RNA and SrmB- binding site of polymerase A BBB50_02575 PF01966 HD domain BBB50_02580 PF13401 AAA domain BBB50_02580 PF01471 Putative peptidoglycan binding domain BBB50_02595 PF01384 Phosphate transporter family BBB50_02600 PF01865 Protein of unknown function DUF47 BBB50_02605 PF01928 CYTH domain BBB50_02610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_02610 PF00672 HAMP domain BBB50_02610 PF02743 Cache domain BBB50_02615 PF08335 GlnD PII-uridylyltransferase BBB50_02615 PF03710 Glutamate-ammonia ligase adenylyltransferase BBB50_02620 PF00294 pfkB family carbohydrate kinase BBB50_02620 PF01467 Cytidylyltransferase-like BBB50_02625 PF02321 Outer membrane efflux protein BBB50_02630 PF00293 NUDIX domain BBB50_02635 PF06853 Protein of unknown function (DUF1249) BBB50_02640 PF00149 Calcineurin-like phosphoesterase BBB50_02645 PF05728 Uncharacterised protein family (UPF0227) BBB50_02650 PF00986 DNA gyrase B subunit, carboxyl terminus BBB50_02650 PF00204 DNA gyrase B BBB50_02650 PF01751 Toprim domain BBB50_02650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_02655 PF03989 DNA gyrase C-terminal domain, beta-propeller BBB50_02655 PF00521 DNA gyrase/topoisomerase IV, subunit A BBB50_02660 PF03884 DNA gyrase inhibitor YacG BBB50_02665 PF07072 Cell division protein BBB50_02670 PF01121 Dephospho-CoA kinase BBB50_02675 PF06750 Bacterial Peptidase A24 N-terminal domain BBB50_02675 PF01478 Type IV leader peptidase family BBB50_02680 PF00482 Type II secretion system (T2SS), protein F BBB50_02685 PF00437 Type II/IV secretion system protein BBB50_02685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BBB50_02690 PF00114 Pilin (bacterial filament) BBB50_02690 PF07963 Prokaryotic N-terminal methylation motif BBB50_02695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BBB50_02695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BBB50_02700 PF01510 N-acetylmuramoyl-L-alanine amidase BBB50_02705 PF00258 Flavodoxin BBB50_02710 PF02899 Phage integrase, N-terminal SAM-like domain BBB50_02710 PF00589 Phage integrase family BBB50_02715 PF10411 Disulfide bond isomerase protein N-terminus BBB50_02715 PF13098 Thioredoxin-like domain BBB50_02720 PF17768 RecJ OB domain BBB50_02720 PF02272 DHHA1 domain BBB50_02720 PF01368 DHH family BBB50_02725 PF00149 Calcineurin-like phosphoesterase BBB50_02725 PF02872 5'-nucleotidase, C-terminal domain BBB50_02730 PF00392 Bacterial regulatory proteins, gntR family BBB50_02730 PF07729 FCD domain BBB50_02735 PF00456 Transketolase, thiamine diphosphate binding domain BBB50_02735 PF17831 Pyruvate dehydrogenase E1 component middle domain BBB50_02740 PF00364 Biotin-requiring enzyme BBB50_02740 PF02817 e3 binding domain BBB50_02740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BBB50_02745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBB50_02745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_02755 PF01795 MraW methylase family BBB50_02760 PF04999 Cell division protein FtsL BBB50_02765 PF03717 Penicillin-binding Protein dimerisation domain BBB50_02765 PF00905 Penicillin binding protein transpeptidase domain BBB50_02770 PF08245 Mur ligase middle domain BBB50_02770 PF02875 Mur ligase family, glutamate ligase domain BBB50_02770 PF01225 Mur ligase family, catalytic domain BBB50_02775 PF08245 Mur ligase middle domain BBB50_02775 PF01225 Mur ligase family, catalytic domain BBB50_02775 PF02875 Mur ligase family, glutamate ligase domain BBB50_02780 PF00953 Glycosyl transferase family 4 BBB50_02780 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BBB50_02785 PF08245 Mur ligase middle domain BBB50_02785 PF02875 Mur ligase family, glutamate ligase domain BBB50_02790 PF01098 Cell cycle protein BBB50_02795 PF03033 Glycosyltransferase family 28 N-terminal domain BBB50_02795 PF04101 Glycosyltransferase family 28 C-terminal domain BBB50_02800 PF08245 Mur ligase middle domain BBB50_02800 PF02875 Mur ligase family, glutamate ligase domain BBB50_02800 PF01225 Mur ligase family, catalytic domain BBB50_02805 PF08478 POTRA domain, FtsQ-type BBB50_02805 PF03799 Cell division protein FtsQ BBB50_02810 PF02491 SHS2 domain inserted in FTSA BBB50_02815 PF12327 FtsZ family, C-terminal domain BBB50_02815 PF00091 Tubulin/FtsZ family, GTPase domain BBB50_02820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BBB50_02830 PF02810 SEC-C motif BBB50_02830 PF07517 SecA DEAD-like domain BBB50_02830 PF07516 SecA Wing and Scaffold domain BBB50_02830 PF01043 SecA preprotein cross-linking domain BBB50_02840 PF00293 NUDIX domain BBB50_02845 PF01113 Dihydrodipicolinate reductase, N-terminus BBB50_02845 PF05173 Dihydrodipicolinate reductase, C-terminus BBB50_02855 PF00117 Glutamine amidotransferase class-I BBB50_02855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BBB50_02860 PF02142 MGS-like domain BBB50_02860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BBB50_02860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBB50_02880 PF00005 ABC transporter BBB50_02885 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BBB50_02890 PF01925 Sulfite exporter TauE/SafE BBB50_02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_02895 PF03466 LysR substrate binding domain BBB50_02900 PF03458 UPF0126 domain BBB50_02905 PF01497 Periplasmic binding protein BBB50_02915 PF01048 Phosphorylase superfamily BBB50_02925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BBB50_02925 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_02930 PF00310 Glutamine amidotransferases class-II BBB50_02930 PF04898 Glutamate synthase central domain BBB50_02930 PF01493 GXGXG motif BBB50_02930 PF01645 Conserved region in glutamate synthase BBB50_02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_02935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BBB50_02940 PF04898 Glutamate synthase central domain BBB50_02940 PF01493 GXGXG motif BBB50_02940 PF00310 Glutamine amidotransferases class-II BBB50_02940 PF01645 Conserved region in glutamate synthase BBB50_02945 PF16199 Radical_SAM C-terminal domain BBB50_02945 PF04055 Radical SAM superfamily BBB50_02950 PF01590 GAF domain BBB50_02950 PF00563 EAL domain BBB50_02950 PF00360 Phytochrome region BBB50_02950 PF00990 Diguanylate cyclase, GGDEF domain BBB50_02955 PF00989 PAS fold BBB50_02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_02955 PF00512 His Kinase A (phospho-acceptor) domain BBB50_02955 PF18415 Histidine kinase receptor ArcB trans-membrane domain BBB50_02955 PF01627 Hpt domain BBB50_02955 PF00072 Response regulator receiver domain BBB50_02960 PF00072 Response regulator receiver domain BBB50_02960 PF00486 Transcriptional regulatory protein, C terminal BBB50_02970 PF03737 Aldolase/RraA BBB50_02980 PF13840 ACT domain BBB50_02980 PF01842 ACT domain BBB50_02980 PF00696 Amino acid kinase family BBB50_02980 PF03447 Homoserine dehydrogenase, NAD binding domain BBB50_02980 PF00742 Homoserine dehydrogenase BBB50_02985 PF08544 GHMP kinases C terminal BBB50_02985 PF00288 GHMP kinases N terminal domain BBB50_02990 PF14821 Threonine synthase N terminus BBB50_02990 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_02995 PF01228 Glycine radical BBB50_03000 PF01261 Xylose isomerase-like TIM barrel BBB50_03005 PF03167 Uracil DNA glycosylase superfamily BBB50_03020 PF01235 Sodium:alanine symporter family BBB50_03025 PF03883 Peroxide stress protein YaaA BBB50_03030 PF01026 TatD related DNase BBB50_03035 PF01773 Na+ dependent nucleoside transporter N-terminus BBB50_03035 PF07662 Na+ dependent nucleoside transporter C-terminus BBB50_03035 PF07670 Nucleoside recognition BBB50_03045 PF01791 DeoC/LacD family aldolase BBB50_03050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BBB50_03050 PF00591 Glycosyl transferase family, a/b domain BBB50_03050 PF02885 Glycosyl transferase family, helical bundle domain BBB50_03055 PF01676 Metalloenzyme superfamily BBB50_03060 PF01048 Phosphorylase superfamily BBB50_03070 PF18429 Domain of unknown function (DUF5609) BBB50_03080 PF18073 Rubredoxin metal binding domain BBB50_03085 PF03764 Elongation factor G, domain IV BBB50_03085 PF14492 Elongation Factor G, domain II BBB50_03085 PF03144 Elongation factor Tu domain 2 BBB50_03085 PF00679 Elongation factor G C-terminus BBB50_03085 PF00009 Elongation factor Tu GTP binding domain BBB50_03090 PF00501 AMP-binding enzyme BBB50_03095 PF00072 Response regulator receiver domain BBB50_03110 PF00356 Bacterial regulatory proteins, lacI family BBB50_03115 PF01588 Putative tRNA binding domain BBB50_03125 PF01544 CorA-like Mg2+ transporter protein BBB50_03130 PF08443 RimK-like ATP-grasp domain BBB50_03130 PF02080 TrkA-C domain BBB50_03130 PF18030 RimK PreATP-grasp domain BBB50_03135 PF00583 Acetyltransferase (GNAT) family BBB50_03145 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BBB50_03145 PF14602 Hexapeptide repeat of succinyl-transferase BBB50_03150 PF07130 YebG protein BBB50_03165 PF17946 RecC C-terminal domain BBB50_03170 PF12705 PD-(D/E)XK nuclease superfamily BBB50_03170 PF00580 UvrD/REP helicase N-terminal domain BBB50_03170 PF13361 UvrD-like helicase C-terminal domain BBB50_03175 PF13538 UvrD-like helicase C-terminal domain BBB50_03190 PF00583 Acetyltransferase (GNAT) family BBB50_03190 PF00696 Amino acid kinase family BBB50_03200 PF06725 3D domain BBB50_03200 PF03562 MltA specific insert domain BBB50_03205 PF00899 ThiF family BBB50_03210 PF02657 Fe-S metabolism associated domain BBB50_03215 PF00266 Aminotransferase class-V BBB50_03220 PF01965 DJ-1/PfpI family BBB50_03225 PF02558 Ketopantoate reductase PanE/ApbA BBB50_03225 PF08546 Ketopantoate reductase PanE/ApbA C terminal BBB50_03230 PF03502 Nucleoside-specific channel-forming protein, Tsx BBB50_03240 PF04545 Sigma-70, region 4 BBB50_03240 PF04542 Sigma-70 region 2 BBB50_03250 PF07690 Major Facilitator Superfamily BBB50_03255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BBB50_03265 PF05175 Methyltransferase small domain BBB50_03270 PF01722 BolA-like protein BBB50_03275 PF11973 NQRA C-terminal domain BBB50_03275 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BBB50_03280 PF03116 NQR2, RnfD, RnfE family BBB50_03285 PF04205 FMN-binding domain BBB50_03290 PF02508 Rnf-Nqr subunit, membrane protein BBB50_03295 PF02508 Rnf-Nqr subunit, membrane protein BBB50_03300 PF00970 Oxidoreductase FAD-binding domain BBB50_03300 PF00175 Oxidoreductase NAD-binding domain BBB50_03300 PF00111 2Fe-2S iron-sulfur cluster binding domain BBB50_03305 PF02424 ApbE family BBB50_03315 PF00817 impB/mucB/samB family BBB50_03315 PF11798 IMS family HHH motif BBB50_03325 PF00990 Diguanylate cyclase, GGDEF domain BBB50_03325 PF17158 Membrane-associated sensor, integral membrane domain BBB50_03330 PF00209 Sodium:neurotransmitter symporter family BBB50_03340 PF18030 RimK PreATP-grasp domain BBB50_03340 PF08443 RimK-like ATP-grasp domain BBB50_03345 PF08443 RimK-like ATP-grasp domain BBB50_03345 PF18030 RimK PreATP-grasp domain BBB50_03350 PF07687 Peptidase dimerisation domain BBB50_03350 PF01546 Peptidase family M20/M25/M40 BBB50_03355 PF00860 Permease family BBB50_03360 PF00156 Phosphoribosyl transferase domain BBB50_03370 PF07417 Sigma factor-binding transcriptional regulator Crl BBB50_03375 PF01472 PUA domain BBB50_03375 PF00696 Amino acid kinase family BBB50_03380 PF00171 Aldehyde dehydrogenase family BBB50_03385 PF03477 ATP cone domain BBB50_03390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BBB50_03390 PF01872 RibD C-terminal domain BBB50_03395 PF00677 Lumazine binding domain BBB50_03400 PF00925 GTP cyclohydrolase II BBB50_03400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BBB50_03405 PF00885 6,7-dimethyl-8-ribityllumazine synthase BBB50_03410 PF01029 NusB family BBB50_03415 PF02769 AIR synthase related protein, C-terminal domain BBB50_03415 PF00586 AIR synthase related protein, N-terminal domain BBB50_03420 PF04608 Phosphatidylglycerophosphatase A BBB50_03425 PF11944 Protein of unknown function (DUF3461) BBB50_03430 PF01909 Nucleotidyltransferase domain BBB50_03430 PF01966 HD domain BBB50_03430 PF08335 GlnD PII-uridylyltransferase BBB50_03435 PF00557 Metallopeptidase family M24 BBB50_03440 PF00318 Ribosomal protein S2 BBB50_03445 PF00889 Elongation factor TS BBB50_03450 PF00696 Amino acid kinase family BBB50_03455 PF01765 Ribosome recycling factor BBB50_03460 PF01255 Putative undecaprenyl diphosphate synthase BBB50_03470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BBB50_03470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BBB50_03470 PF13288 DXP reductoisomerase C-terminal domain BBB50_03475 PF02163 Peptidase family M50 BBB50_03475 PF17820 PDZ domain BBB50_03480 PF07244 Surface antigen variable number repeat BBB50_03480 PF01103 Surface antigen BBB50_03485 PF03938 Outer membrane protein (OmpH-like) BBB50_03490 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_03490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BBB50_03495 PF07977 FabA-like domain BBB50_03500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BBB50_03500 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_03505 PF02684 Lipid-A-disaccharide synthetase BBB50_03510 PF01351 Ribonuclease HII BBB50_03515 PF14579 Helix-hairpin-helix motif BBB50_03515 PF01336 OB-fold nucleic acid binding domain BBB50_03515 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBB50_03515 PF02811 PHP domain BBB50_03515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBB50_03520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BBB50_03525 PF09179 TilS substrate binding domain BBB50_03525 PF01171 PP-loop family BBB50_03525 PF11734 TilS substrate C-terminal domain BBB50_03530 PF00034 Cytochrome c BBB50_03535 PF05870 Phenolic acid decarboxylase (PAD) BBB50_03540 PF00543 Nitrogen regulatory protein P-II BBB50_03545 PF03372 Endonuclease/Exonuclease/phosphatase family BBB50_03550 PF01476 LysM domain BBB50_03550 PF01464 Transglycosylase SLT domain BBB50_03555 PF00753 Metallo-beta-lactamase superfamily BBB50_03555 PF16123 Hydroxyacylglutathione hydrolase C-terminus BBB50_03560 PF08241 Methyltransferase domain BBB50_03565 PF00075 RNase H BBB50_03570 PF00929 Exonuclease BBB50_03580 PF02770 Acyl-CoA dehydrogenase, middle domain BBB50_03580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BBB50_03580 PF09317 Domain of unknown function (DUF1974) BBB50_03580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BBB50_03585 PF13580 SIS domain BBB50_03590 PF13230 Glutamine amidotransferases class-II BBB50_03595 PF00551 Formyl transferase BBB50_03600 PF00586 AIR synthase related protein, N-terminal domain BBB50_03600 PF02769 AIR synthase related protein, C-terminal domain BBB50_03610 PF08448 PAS fold BBB50_03610 PF00990 Diguanylate cyclase, GGDEF domain BBB50_03615 PF01479 S4 domain BBB50_03615 PF00849 RNA pseudouridylate synthase BBB50_03620 PF01713 Smr domain BBB50_03635 PF01963 TraB family BBB50_03640 PF00728 Glycosyl hydrolase family 20, catalytic domain BBB50_03640 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BBB50_03640 PF03173 Putative carbohydrate binding domain BBB50_03640 PF02838 Glycosyl hydrolase family 20, domain 2 BBB50_03650 PF00403 Heavy-metal-associated domain BBB50_03655 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBB50_03660 PF00691 OmpA family BBB50_03660 PF01389 OmpA-like transmembrane domain BBB50_03670 PF07715 TonB-dependent Receptor Plug Domain BBB50_03675 PF04954 Siderophore-interacting protein BBB50_03675 PF08021 Siderophore-interacting FAD-binding domain BBB50_03680 PF00550 Phosphopantetheine attachment site BBB50_03680 PF08242 Methyltransferase domain BBB50_03680 PF00501 AMP-binding enzyme BBB50_03680 PF00668 Condensation domain BBB50_03715 PF00072 Response regulator receiver domain BBB50_03715 PF01584 CheW-like domain BBB50_03720 PF01739 CheR methyltransferase, SAM binding domain BBB50_03720 PF03705 CheR methyltransferase, all-alpha domain BBB50_03725 PF00460 Flagella basal body rod protein BBB50_03730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBB50_03730 PF00460 Flagella basal body rod protein BBB50_03735 PF13861 FlgD Tudor-like domain BBB50_03735 PF03963 Flagellar hook capping protein - N-terminal region BBB50_03735 PF13860 FlgD Ig-like domain BBB50_03740 PF00460 Flagella basal body rod protein BBB50_03740 PF07559 Flagellar basal body protein FlaE BBB50_03740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBB50_03745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBB50_03745 PF00460 Flagella basal body rod protein BBB50_03750 PF00460 Flagella basal body rod protein BBB50_03750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBB50_03755 PF02107 Flagellar L-ring protein BBB50_03760 PF02119 Flagellar P-ring protein BBB50_03765 PF10135 Rod binding protein BBB50_03765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BBB50_03770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBB50_03770 PF07196 Flagellin hook IN motif BBB50_03785 PF00700 Bacterial flagellin C-terminal helical region BBB50_03785 PF07196 Flagellin hook IN motif BBB50_03785 PF00669 Bacterial flagellin N-terminal helical region BBB50_03790 PF00700 Bacterial flagellin C-terminal helical region BBB50_03790 PF07196 Flagellin hook IN motif BBB50_03790 PF00669 Bacterial flagellin N-terminal helical region BBB50_03875 PF06071 Protein of unknown function (DUF933) BBB50_03875 PF01926 50S ribosome-binding GTPase BBB50_03880 PF01195 Peptidyl-tRNA hydrolase BBB50_03885 PF14572 Phosphoribosyl synthetase-associated domain BBB50_03885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBB50_03890 PF08544 GHMP kinases C terminal BBB50_03890 PF00288 GHMP kinases N terminal domain BBB50_03895 PF03550 Outer membrane lipoprotein LolB BBB50_03900 PF01488 Shikimate / quinate 5-dehydrogenase BBB50_03900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BBB50_03900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BBB50_03905 PF03462 PCRF domain BBB50_03905 PF00472 RF-1 domain BBB50_03910 PF13847 Methyltransferase domain BBB50_03910 PF17827 PrmC N-terminal domain BBB50_03915 PF04247 Invasion gene expression up-regulator, SirB BBB50_03920 PF13369 Transglutaminase-like superfamily BBB50_03925 PF00793 DAHP synthetase I family BBB50_03930 PF02872 5'-nucleotidase, C-terminal domain BBB50_03930 PF00149 Calcineurin-like phosphoesterase BBB50_03935 PF04073 Aminoacyl-tRNA editing domain BBB50_03940 PF00860 Permease family BBB50_03955 PF03358 NADPH-dependent FMN reductase BBB50_03960 PF03960 ArsC family BBB50_03965 PF13181 Tetratricopeptide repeat BBB50_03965 PF01435 Peptidase family M48 BBB50_03975 PF01594 AI-2E family transporter BBB50_03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_03980 PF00672 HAMP domain BBB50_03980 PF02743 Cache domain BBB50_03985 PF00578 AhpC/TSA family BBB50_03995 PF00701 Dihydrodipicolinate synthetase family BBB50_04000 PF06804 NlpB/DapX lipoprotein BBB50_04010 PF02557 D-alanyl-D-alanine carboxypeptidase BBB50_04015 PF07687 Peptidase dimerisation domain BBB50_04015 PF01546 Peptidase family M20/M25/M40 BBB50_04020 PF03960 ArsC family BBB50_04035 PF11143 Protein of unknown function (DUF2919) BBB50_04040 PF04261 Dyp-type peroxidase family BBB50_04045 PF00669 Bacterial flagellin N-terminal helical region BBB50_04045 PF07196 Flagellin hook IN motif BBB50_04045 PF00700 Bacterial flagellin C-terminal helical region BBB50_04050 PF00669 Bacterial flagellin N-terminal helical region BBB50_04050 PF07196 Flagellin hook IN motif BBB50_04050 PF00700 Bacterial flagellin C-terminal helical region BBB50_04055 PF07196 Flagellin hook IN motif BBB50_04055 PF00700 Bacterial flagellin C-terminal helical region BBB50_04055 PF00669 Bacterial flagellin N-terminal helical region BBB50_04060 PF03646 FlaG protein BBB50_04065 PF07196 Flagellin hook IN motif BBB50_04065 PF02465 Flagellar hook-associated protein 2 N-terminus BBB50_04065 PF07195 Flagellar hook-associated protein 2 C-terminus BBB50_04075 PF02561 Flagellar protein FliS BBB50_04080 PF00158 Sigma-54 interaction domain BBB50_04080 PF02954 Bacterial regulatory protein, Fis family BBB50_04080 PF00072 Response regulator receiver domain BBB50_04085 PF13493 Domain of unknown function (DUF4118) BBB50_04085 PF13426 PAS domain BBB50_04085 PF08447 PAS fold BBB50_04085 PF00512 His Kinase A (phospho-acceptor) domain BBB50_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_04085 PF00989 PAS fold BBB50_04090 PF00072 Response regulator receiver domain BBB50_04090 PF00158 Sigma-54 interaction domain BBB50_04090 PF02954 Bacterial regulatory protein, Fis family BBB50_04095 PF02049 Flagellar hook-basal body complex protein FliE BBB50_04100 PF01514 Secretory protein of YscJ/FliF family BBB50_04100 PF08345 Flagellar M-ring protein C-terminal BBB50_04105 PF14841 FliG middle domain BBB50_04105 PF01706 FliG C-terminal domain BBB50_04105 PF14842 FliG N-terminal domain BBB50_04115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBB50_04115 PF18269 T3SS EscN ATPase C-terminal domain BBB50_04130 PF03748 Flagellar basal body-associated protein FliL BBB50_04135 PF02154 Flagellar motor switch protein FliM BBB50_04135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BBB50_04140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BBB50_04145 PF04347 Flagellar biosynthesis protein, FliO BBB50_04150 PF00813 FliP family BBB50_04155 PF01313 Bacterial export proteins, family 3 BBB50_04160 PF01311 Bacterial export proteins, family 1 BBB50_04165 PF01312 FlhB HrpN YscU SpaS Family BBB50_04170 PF01713 Smr domain BBB50_04175 PF05175 Methyltransferase small domain BBB50_04185 PF01264 Chorismate synthase BBB50_04190 PF03458 UPF0126 domain BBB50_04195 PF04315 Elongation factor P hydroxylase BBB50_04200 PF08891 YfcL protein BBB50_04205 PF03358 NADPH-dependent FMN reductase BBB50_04210 PF01266 FAD dependent oxidoreductase BBB50_04210 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BBB50_04215 PF02801 Beta-ketoacyl synthase, C-terminal domain BBB50_04215 PF00109 Beta-ketoacyl synthase, N-terminal domain BBB50_04220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBB50_04220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBB50_04220 PF11890 Domain of unknown function (DUF3410) BBB50_04225 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBB50_04225 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBB50_04230 PF01475 Ferric uptake regulator family BBB50_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_04240 PF03466 LysR substrate binding domain BBB50_04245 PF03788 LrgA family BBB50_04250 PF04172 LrgB-like family BBB50_04255 PF00258 Flavodoxin BBB50_04265 PF12697 Alpha/beta hydrolase family BBB50_04270 PF17206 SeqA protein N-terminal domain BBB50_04270 PF03925 SeqA protein C-terminal domain BBB50_04275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBB50_04275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBB50_04275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBB50_04275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBB50_04285 PF01784 NIF3 (NGG1p interacting factor 3) BBB50_04290 PF00285 Citrate synthase, C-terminal domain BBB50_04295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BBB50_04300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BBB50_04305 PF00890 FAD binding domain BBB50_04305 PF02910 Fumarate reductase flavoprotein C-term BBB50_04310 PF13085 2Fe-2S iron-sulfur cluster binding domain BBB50_04315 PF00676 Dehydrogenase E1 component BBB50_04315 PF16870 2-oxoglutarate dehydrogenase C-terminal BBB50_04315 PF16078 2-oxoglutarate dehydrogenase N-terminus BBB50_04315 PF02779 Transketolase, pyrimidine binding domain BBB50_04320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BBB50_04320 PF00364 Biotin-requiring enzyme BBB50_04320 PF02817 e3 binding domain BBB50_04325 PF00549 CoA-ligase BBB50_04325 PF08442 ATP-grasp domain BBB50_04330 PF00549 CoA-ligase BBB50_04330 PF02629 CoA binding domain BBB50_04335 PF00950 ABC 3 transport family BBB50_04340 PF00005 ABC transporter BBB50_04345 PF01297 Zinc-uptake complex component A periplasmic BBB50_04350 PF02311 AraC-like ligand binding domain BBB50_04350 PF12833 Helix-turn-helix domain BBB50_04355 PF04023 FeoA domain BBB50_04360 PF07664 Ferrous iron transport protein B C terminus BBB50_04360 PF07670 Nucleoside recognition BBB50_04360 PF02421 Ferrous iron transport protein B BBB50_04375 PF00750 tRNA synthetases class I (R) BBB50_04375 PF03485 Arginyl tRNA synthetase N terminal domain BBB50_04375 PF05746 DALR anticodon binding domain BBB50_04385 PF05193 Peptidase M16 inactive domain BBB50_04385 PF00675 Insulinase (Peptidase family M16) BBB50_04390 PF00300 Histidine phosphatase superfamily (branch 1) BBB50_04395 PF00771 FHIPEP family BBB50_04400 PF00448 SRP54-type protein, GTPase domain BBB50_04405 PF10609 NUBPL iron-transfer P-loop NTPase BBB50_04410 PF04539 Sigma-70 region 3 BBB50_04410 PF04542 Sigma-70 region 2 BBB50_04410 PF04545 Sigma-70, region 4 BBB50_04415 PF00072 Response regulator receiver domain BBB50_04420 PF04344 Chemotaxis phosphatase, CheZ BBB50_04425 PF01584 CheW-like domain BBB50_04425 PF07194 P2 response regulator binding domain BBB50_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_04425 PF01627 Hpt domain BBB50_04425 PF02895 Signal transducing histidine kinase, homodimeric domain BBB50_04430 PF00072 Response regulator receiver domain BBB50_04430 PF01339 CheB methylesterase BBB50_04435 PF13614 AAA domain BBB50_04445 PF01584 CheW-like domain BBB50_04455 PF00005 ABC transporter BBB50_04460 PF03379 CcmB protein BBB50_04465 PF01578 Cytochrome C assembly protein BBB50_04470 PF04995 Heme exporter protein D (CcmD) BBB50_04475 PF03100 CcmE BBB50_04480 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BBB50_04480 PF01578 Cytochrome C assembly protein BBB50_04485 PF08534 Redoxin BBB50_04490 PF03918 Cytochrome C biogenesis protein BBB50_04500 PF04333 MlaA lipoprotein BBB50_04515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BBB50_04515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BBB50_04520 PF00462 Glutaredoxin BBB50_04525 PF01131 DNA topoisomerase BBB50_04525 PF01751 Toprim domain BBB50_04530 PF00850 Histone deacetylase domain BBB50_04545 PF00884 Sulfatase BBB50_04545 PF11893 Domain of unknown function (DUF3413) BBB50_04550 PF07208 Protein of unknown function (DUF1414) BBB50_04555 PF04245 37-kD nucleoid-associated bacterial protein BBB50_04565 PF03553 Na+/H+ antiporter family BBB50_04570 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBB50_04570 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBB50_04575 PF01914 MarC family integral membrane protein BBB50_04580 PF00171 Aldehyde dehydrogenase family BBB50_04580 PF00465 Iron-containing alcohol dehydrogenase BBB50_04590 PF01740 STAS domain BBB50_04590 PF00916 Sulfate permease family BBB50_04595 PF10150 Ribonuclease E/G family BBB50_04595 PF00575 S1 RNA binding domain BBB50_04595 PF12111 Polyribonucleotide phosphorylase C terminal BBB50_04610 PF01479 S4 domain BBB50_04610 PF00849 RNA pseudouridylate synthase BBB50_04615 PF02545 Maf-like protein BBB50_04620 PF02620 Large ribosomal RNA subunit accumulation protein YceD BBB50_04625 PF01783 Ribosomal L32p protein family BBB50_04630 PF02504 Fatty acid synthesis protein BBB50_04635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BBB50_04635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BBB50_04640 PF00698 Acyl transferase domain BBB50_04650 PF00550 Phosphopantetheine attachment site BBB50_04655 PF00109 Beta-ketoacyl synthase, N-terminal domain BBB50_04655 PF02801 Beta-ketoacyl synthase, C-terminal domain BBB50_04660 PF01063 Amino-transferase class IV BBB50_04665 PF02618 YceG-like family BBB50_04670 PF02223 Thymidylate kinase BBB50_04675 PF09115 DNA polymerase III, delta subunit, C terminal BBB50_04680 PF01026 TatD related DNase BBB50_04685 PF00367 phosphotransferase system, EIIB BBB50_04685 PF02378 Phosphotransferase system, EIIC BBB50_04690 PF00209 Sodium:neurotransmitter symporter family BBB50_04700 PF01734 Patatin-like phospholipase BBB50_04705 PF02887 Pyruvate kinase, alpha/beta domain BBB50_04705 PF00224 Pyruvate kinase, barrel domain BBB50_04710 PF00480 ROK family BBB50_04715 PF00072 Response regulator receiver domain BBB50_04715 PF01584 CheW-like domain BBB50_04730 PF13847 Methyltransferase domain BBB50_04740 PF01263 Aldose 1-epimerase BBB50_04745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBB50_04745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBB50_04750 PF01641 SelR domain BBB50_04760 PF07023 Protein of unknown function (DUF1315) BBB50_04765 PF00710 Asparaginase, N-terminal BBB50_04765 PF17763 Glutaminase/Asparaginase C-terminal domain BBB50_04770 PF01343 Peptidase family S49 BBB50_04775 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_04775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBB50_04780 PF00551 Formyl transferase BBB50_04780 PF01842 ACT domain BBB50_04790 PF13307 Helicase C-terminal domain BBB50_04790 PF04851 Type III restriction enzyme, res subunit BBB50_04795 PF00814 Glycoprotease family BBB50_04810 PF00561 alpha/beta hydrolase fold BBB50_04815 PF00501 AMP-binding enzyme BBB50_04815 PF13193 AMP-binding enzyme C-terminal domain BBB50_04820 PF01612 3'-5' exonuclease BBB50_04820 PF00570 HRDC domain BBB50_04840 PF01966 HD domain BBB50_04840 PF13286 Phosphohydrolase-associated domain BBB50_04850 PF00155 Aminotransferase class I and II BBB50_04855 PF00425 chorismate binding enzyme BBB50_04860 PF16582 Middle domain of thiamine pyrophosphate BBB50_04860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBB50_04860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBB50_04865 PF12697 Alpha/beta hydrolase family BBB50_04870 PF00378 Enoyl-CoA hydratase/isomerase BBB50_04875 PF13378 Enolase C-terminal domain-like BBB50_04880 PF13193 AMP-binding enzyme C-terminal domain BBB50_04880 PF00501 AMP-binding enzyme BBB50_04885 PF03594 Benzoate membrane transport protein BBB50_04890 PF01381 Helix-turn-helix BBB50_04890 PF07883 Cupin domain BBB50_04895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_04895 PF12729 Four helix bundle sensory module for signal transduction BBB50_04895 PF00672 HAMP domain BBB50_04905 PF07690 Major Facilitator Superfamily BBB50_04925 PF04170 NlpE N-terminal domain BBB50_04930 PF03776 Septum formation topological specificity factor MinE BBB50_04935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BBB50_04940 PF03775 Septum formation inhibitor MinC, C-terminal domain BBB50_04940 PF05209 Septum formation inhibitor MinC, N-terminal domain BBB50_04945 PF05166 YcgL domain BBB50_04950 PF13406 Transglycosylase SLT domain BBB50_04955 PF03466 LysR substrate binding domain BBB50_04955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_04960 PF07670 Nucleoside recognition BBB50_04960 PF07662 Na+ dependent nucleoside transporter C-terminus BBB50_04960 PF01773 Na+ dependent nucleoside transporter N-terminus BBB50_04965 PF00704 Glycosyl hydrolases family 18 BBB50_04970 PF03264 NapC/NirT cytochrome c family, N-terminal region BBB50_04975 PF18364 Molybdopterin oxidoreductase N-terminal domain BBB50_04975 PF01568 Molydopterin dinucleotide binding domain BBB50_04975 PF00384 Molybdopterin oxidoreductase BBB50_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_04985 PF03466 LysR substrate binding domain BBB50_04990 PF01494 FAD binding domain BBB50_04995 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BBB50_05005 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BBB50_05005 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BBB50_05050 PF00990 Diguanylate cyclase, GGDEF domain BBB50_05050 PF03707 Bacterial signalling protein N terminal repeat BBB50_05050 PF00563 EAL domain BBB50_05050 PF13188 PAS domain BBB50_05065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BBB50_05070 PF03480 Bacterial extracellular solute-binding protein, family 7 BBB50_05075 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BBB50_05080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BBB50_05085 PF02954 Bacterial regulatory protein, Fis family BBB50_05085 PF00072 Response regulator receiver domain BBB50_05085 PF00158 Sigma-54 interaction domain BBB50_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_05090 PF02743 Cache domain BBB50_05090 PF00512 His Kinase A (phospho-acceptor) domain BBB50_05100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBB50_05100 PF05698 Bacterial trigger factor protein (TF) C-terminus BBB50_05100 PF05697 Bacterial trigger factor protein (TF) BBB50_05105 PF00574 Clp protease BBB50_05110 PF10431 C-terminal, D2-small domain, of ClpB protein BBB50_05110 PF06689 ClpX C4-type zinc finger BBB50_05110 PF07724 AAA domain (Cdc48 subfamily) BBB50_05115 PF05362 Lon protease (S16) C-terminal proteolytic domain BBB50_05115 PF02190 ATP-dependent protease La (LON) substrate-binding domain BBB50_05115 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_05120 PF00216 Bacterial DNA-binding protein BBB50_05125 PF13145 PPIC-type PPIASE domain BBB50_05135 PF02224 Cytidylate kinase BBB50_05140 PF00575 S1 RNA binding domain BBB50_05145 PF00216 Bacterial DNA-binding protein BBB50_05150 PF06305 Lipopolysaccharide assembly protein A domain BBB50_05155 PF18073 Rubredoxin metal binding domain BBB50_05160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBB50_05165 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BBB50_05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_05175 PF03466 LysR substrate binding domain BBB50_05185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BBB50_05185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BBB50_05190 PF01037 Lrp/AsnC ligand binding domain BBB50_05195 PF01580 FtsK/SpoIIIE family BBB50_05195 PF17854 FtsK alpha domain BBB50_05195 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BBB50_05195 PF09397 Ftsk gamma domain BBB50_05200 PF02600 Disulfide bond formation protein DsbB BBB50_05205 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BBB50_05210 PF00392 Bacterial regulatory proteins, gntR family BBB50_05210 PF07840 FadR C-terminal domain BBB50_05220 PF00672 HAMP domain BBB50_05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_05225 PF01230 HIT domain BBB50_05240 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BBB50_05240 PF13036 Peptidoglycan-synthase activator LpoB BBB50_05250 PF05728 Uncharacterised protein family (UPF0227) BBB50_05255 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_05265 PF12563 Hemolytic toxin N terminal BBB50_05265 PF16458 Beta-prism lectin BBB50_05265 PF07968 Leukocidin/Hemolysin toxin family BBB50_05275 PF17757 UvrB interaction domain BBB50_05275 PF02559 CarD-like/TRCF domain BBB50_05275 PF00271 Helicase conserved C-terminal domain BBB50_05275 PF00270 DEAD/DEAH box helicase BBB50_05275 PF03461 TRCF domain BBB50_05285 PF02687 FtsX-like permease family BBB50_05285 PF12704 MacB-like periplasmic core domain BBB50_05290 PF00005 ABC transporter BBB50_05295 PF02687 FtsX-like permease family BBB50_05295 PF12704 MacB-like periplasmic core domain BBB50_05305 PF00753 Metallo-beta-lactamase superfamily BBB50_05305 PF13567 Domain of unknown function (DUF4131) BBB50_05305 PF03772 Competence protein BBB50_05310 PF00005 ABC transporter BBB50_05310 PF00664 ABC transporter transmembrane region BBB50_05315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BBB50_05320 PF03966 Trm112p-like protein BBB50_05325 PF02348 Cytidylyltransferase BBB50_05330 PF04293 SpoVR like protein BBB50_05335 PF04285 Protein of unknown function (DUF444) BBB50_05340 PF06798 PrkA serine protein kinase C-terminal domain BBB50_05340 PF08298 PrkA AAA domain BBB50_05345 PF03887 YfbU domain BBB50_05355 PF04055 Radical SAM superfamily BBB50_05360 PF12729 Four helix bundle sensory module for signal transduction BBB50_05360 PF00672 HAMP domain BBB50_05360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_05370 PF01228 Glycine radical BBB50_05370 PF02901 Pyruvate formate lyase-like BBB50_05380 PF00005 ABC transporter BBB50_05385 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_05390 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_05395 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_05400 PF03372 Endonuclease/Exonuclease/phosphatase family BBB50_05405 PF00672 HAMP domain BBB50_05405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_05410 PF10689 Protein of unknown function (DUF2496) BBB50_05415 PF07445 Primosomal replication protein priC BBB50_05420 PF01925 Sulfite exporter TauE/SafE BBB50_05425 PF06733 DEAD_2 BBB50_05425 PF13307 Helicase C-terminal domain BBB50_05430 PF13609 Gram-negative porin BBB50_05435 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BBB50_05440 PF02810 SEC-C motif BBB50_05445 PF00563 EAL domain BBB50_05445 PF08668 HDOD domain BBB50_05450 PF00149 Calcineurin-like phosphoesterase BBB50_05455 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BBB50_05460 PF01406 tRNA synthetases class I (C) catalytic domain BBB50_05460 PF09190 DALR domain BBB50_05465 PF02075 Crossover junction endodeoxyribonuclease RuvC BBB50_05470 PF07499 RuvA, C-terminal domain BBB50_05470 PF01330 RuvA N terminal domain BBB50_05475 PF05491 RuvB C-terminal winged helix domain BBB50_05475 PF05496 Holliday junction DNA helicase RuvB P-loop domain BBB50_05475 PF17864 RuvB AAA lid domain BBB50_05480 PF01654 Cytochrome bd terminal oxidase subunit I BBB50_05485 PF02322 Cytochrome bd terminal oxidase subunit II BBB50_05490 PF08173 Membrane bound YbgT-like protein BBB50_05495 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BBB50_05500 PF03061 Thioesterase superfamily BBB50_05505 PF01618 MotA/TolQ/ExbB proton channel family BBB50_05510 PF02472 Biopolymer transport protein ExbD/TolR BBB50_05520 PF04052 TolB amino-terminal domain BBB50_05520 PF07676 WD40-like Beta Propeller Repeat BBB50_05525 PF00691 OmpA family BBB50_05535 PF02445 Quinolinate synthetase A protein BBB50_05545 PF00512 His Kinase A (phospho-acceptor) domain BBB50_05545 PF09308 LuxQ, periplasmic BBB50_05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_05545 PF00072 Response regulator receiver domain BBB50_05550 PF06610 L-alanine exporter BBB50_05555 PF01238 Phosphomannose isomerase type I BBB50_05560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBB50_05560 PF02378 Phosphotransferase system, EIIC BBB50_05560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBB50_05565 PF12833 Helix-turn-helix domain BBB50_05575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBB50_05595 PF00171 Aldehyde dehydrogenase family BBB50_05600 PF01590 GAF domain BBB50_05600 PF02954 Bacterial regulatory protein, Fis family BBB50_05600 PF00158 Sigma-54 interaction domain BBB50_05605 PF09905 DNA-binding protein VF530 BBB50_05615 PF00875 DNA photolyase BBB50_05615 PF03441 FAD binding domain of DNA photolyase BBB50_05685 PF00005 ABC transporter BBB50_05730 PF01527 Transposase BBB50_05735 PF00665 Integrase core domain BBB50_05745 PF04002 RadC-like JAB domain BBB50_05755 PF13088 BNR repeat-like domain BBB50_05755 PF09264 Vibrio cholerae sialidase, lectin insertion BBB50_05760 PF01979 Amidohydrolase family BBB50_05765 PF00480 ROK family BBB50_05770 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BBB50_05780 PF03480 Bacterial extracellular solute-binding protein, family 7 BBB50_05785 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BBB50_05790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BBB50_05795 PF00701 Dihydrodipicolinate synthetase family BBB50_05800 PF01418 Helix-turn-helix domain, rpiR family BBB50_05800 PF01380 SIS domain BBB50_05805 PF01344 Kelch motif BBB50_05810 PF07646 Kelch motif BBB50_05830 PF02384 N-6 DNA Methylase BBB50_05850 PF18766 SWI2/SNF2 ATPase BBB50_05850 PF11867 Domain of unknown function (DUF3387) BBB50_05850 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BBB50_05870 PF00176 SNF2 family N-terminal domain BBB50_05870 PF00271 Helicase conserved C-terminal domain BBB50_05870 PF12419 SNF2 Helicase protein BBB50_05880 PF13356 Arm DNA-binding domain BBB50_05880 PF00589 Phage integrase family BBB50_05890 PF00873 AcrB/AcrD/AcrF family BBB50_05895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_05905 PF02470 MlaD protein BBB50_05910 PF04403 Paraquat-inducible protein A BBB50_05915 PF00924 Mechanosensitive ion channel BBB50_05915 PF05552 Conserved TM helix BBB50_05940 PF08362 YcdC-like protein, C-terminal region BBB50_05940 PF00440 Bacterial regulatory proteins, tetR family BBB50_05945 PF00171 Aldehyde dehydrogenase family BBB50_05950 PF07383 Protein of unknown function (DUF1496) BBB50_05960 PF00440 Bacterial regulatory proteins, tetR family BBB50_05960 PF16295 Tetracyclin repressor-like, C-terminal domain BBB50_05965 PF09317 Domain of unknown function (DUF1974) BBB50_05965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BBB50_05965 PF02770 Acyl-CoA dehydrogenase, middle domain BBB50_05965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BBB50_05970 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BBB50_05970 PF07055 Enoyl reductase FAD binding domain BBB50_05970 PF12241 Trans-2-enoyl-CoA reductase catalytic region BBB50_05975 PF01176 Translation initiation factor 1A / IF-1 BBB50_05980 PF04377 Arginine-tRNA-protein transferase, C terminus BBB50_05980 PF04376 Arginine-tRNA-protein transferase, N terminus BBB50_05985 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BBB50_05995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBB50_06000 PF10692 Protein of unknown function (DUF2498) BBB50_06005 PF01751 Toprim domain BBB50_06005 PF01131 DNA topoisomerase BBB50_06005 PF01396 Topoisomerase DNA binding C4 zinc finger BBB50_06005 PF08272 Topoisomerase I zinc-ribbon-like BBB50_06010 PF00483 Nucleotidyl transferase BBB50_06015 PF08323 Starch synthase catalytic domain BBB50_06015 PF00534 Glycosyl transferases group 1 BBB50_06035 PF04994 TfoX C-terminal domain BBB50_06035 PF04993 TfoX N-terminal domain BBB50_06040 PF00356 Bacterial regulatory proteins, lacI family BBB50_06045 PF02613 Nitrate reductase delta subunit BBB50_06050 PF00486 Transcriptional regulatory protein, C terminal BBB50_06050 PF00072 Response regulator receiver domain BBB50_06055 PF02698 DUF218 domain BBB50_06065 PF17193 MukF C-terminal domain BBB50_06065 PF17192 MukF middle domain BBB50_06065 PF03882 MukF winged-helix domain BBB50_06070 PF04288 MukE-like family BBB50_06075 PF04310 MukB N-terminal BBB50_06075 PF16330 MukB hinge domain BBB50_06080 PF01037 Lrp/AsnC ligand binding domain BBB50_06085 PF01810 LysE type translocator BBB50_06090 PF04055 Radical SAM superfamily BBB50_06090 PF08497 Radical SAM N-terminal BBB50_06090 PF11842 Domain of unknown function (DUF3362) BBB50_06095 PF00990 Diguanylate cyclase, GGDEF domain BBB50_06095 PF08448 PAS fold BBB50_06095 PF08447 PAS fold BBB50_06095 PF00563 EAL domain BBB50_06100 PF00675 Insulinase (Peptidase family M16) BBB50_06100 PF05193 Peptidase M16 inactive domain BBB50_06115 PF03466 LysR substrate binding domain BBB50_06115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_06120 PF08267 Cobalamin-independent synthase, N-terminal domain BBB50_06120 PF01717 Cobalamin-independent synthase, Catalytic domain BBB50_06130 PF03795 YCII-related domain BBB50_06135 PF03061 Thioesterase superfamily BBB50_06140 PF04279 Intracellular septation protein A BBB50_06150 PF02698 DUF218 domain BBB50_06155 PF01370 NAD dependent epimerase/dehydratase family BBB50_06165 PF01226 Formate/nitrite transporter BBB50_06175 PF06796 Periplasmic nitrate reductase protein NapE BBB50_06180 PF03264 NapC/NirT cytochrome c family, N-terminal region BBB50_06185 PF01568 Molydopterin dinucleotide binding domain BBB50_06185 PF18364 Molybdopterin oxidoreductase N-terminal domain BBB50_06185 PF00384 Molybdopterin oxidoreductase BBB50_06205 PF02833 DHHA2 domain BBB50_06205 PF01368 DHH family BBB50_06220 PF00005 ABC transporter BBB50_06225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_06225 PF00005 ABC transporter BBB50_06230 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_06230 PF12911 N-terminal TM domain of oligopeptide transport permease C BBB50_06235 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_06240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_06245 PF02954 Bacterial regulatory protein, Fis family BBB50_06245 PF00158 Sigma-54 interaction domain BBB50_06250 PF04012 PspA/IM30 family BBB50_06265 PF00529 HlyD membrane-fusion protein of T1SS BBB50_06265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_06270 PF13533 Biotin-lipoyl like BBB50_06275 PF00873 AcrB/AcrD/AcrF family BBB50_06280 PF03352 Methyladenine glycosylase BBB50_06285 PF01053 Cys/Met metabolism PLP-dependent enzyme BBB50_06290 PF13396 Phospholipase_D-nuclease N-terminal BBB50_06290 PF13091 PLD-like domain BBB50_06295 PF00209 Sodium:neurotransmitter symporter family BBB50_06300 PF00849 RNA pseudouridylate synthase BBB50_06305 PF01066 CDP-alcohol phosphatidyltransferase BBB50_06310 PF00005 ABC transporter BBB50_06315 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_06320 PF13416 Bacterial extracellular solute-binding protein BBB50_06330 PF06945 Protein of unknown function (DUF1289) BBB50_06345 PF00005 ABC transporter BBB50_06350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_06355 PF03222 Tryptophan/tyrosine permease family BBB50_06365 PF01769 Divalent cation transporter BBB50_06365 PF00571 CBS domain BBB50_06365 PF03448 MgtE intracellular N domain BBB50_06370 PF00512 His Kinase A (phospho-acceptor) domain BBB50_06370 PF09308 LuxQ, periplasmic BBB50_06370 PF00072 Response regulator receiver domain BBB50_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_06375 PF00563 EAL domain BBB50_06375 PF03707 Bacterial signalling protein N terminal repeat BBB50_06375 PF00990 Diguanylate cyclase, GGDEF domain BBB50_06385 PF01752 Collagenase BBB50_06385 PF04151 Bacterial pre-peptidase C-terminal domain BBB50_06385 PF08453 Peptidase family M9 N-terminal BBB50_06395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_06395 PF12793 Sugar transport-related sRNA regulator N-term BBB50_06415 PF12729 Four helix bundle sensory module for signal transduction BBB50_06415 PF00672 HAMP domain BBB50_06415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_06430 PF00990 Diguanylate cyclase, GGDEF domain BBB50_06430 PF01590 GAF domain BBB50_06430 PF00563 EAL domain BBB50_06430 PF00360 Phytochrome region BBB50_06435 PF01386 Ribosomal L25p family BBB50_06445 PF00072 Response regulator receiver domain BBB50_06445 PF00486 Transcriptional regulatory protein, C terminal BBB50_06455 PF04851 Type III restriction enzyme, res subunit BBB50_06455 PF00271 Helicase conserved C-terminal domain BBB50_06460 PF00849 RNA pseudouridylate synthase BBB50_06460 PF01479 S4 domain BBB50_06465 PF07690 Major Facilitator Superfamily BBB50_06475 PF13460 NAD(P)H-binding BBB50_06475 PF11066 Protein of unknown function (DUF2867) BBB50_06480 PF01554 MatE BBB50_06485 PF00005 ABC transporter BBB50_06500 PF06965 Na+/H+ antiporter 1 BBB50_06505 PF00202 Aminotransferase class-III BBB50_06510 PF03435 Saccharopine dehydrogenase NADP binding domain BBB50_06510 PF16653 Saccharopine dehydrogenase C-terminal domain BBB50_06520 PF05736 OprF membrane domain BBB50_06520 PF00691 OmpA family BBB50_06525 PF02321 Outer membrane efflux protein BBB50_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_06550 PF03466 LysR substrate binding domain BBB50_06560 PF01863 Protein of unknown function DUF45 BBB50_06565 PF05971 RNA methyltransferase BBB50_06580 PF04204 Homoserine O-succinyltransferase BBB50_06600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_06615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BBB50_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_06615 PF00989 PAS fold BBB50_06615 PF17203 Single cache domain 3 BBB50_06620 PF12431 Transcriptional regulator BBB50_06620 PF00072 Response regulator receiver domain BBB50_06630 PF01584 CheW-like domain BBB50_06630 PF00072 Response regulator receiver domain BBB50_06645 PF00990 Diguanylate cyclase, GGDEF domain BBB50_06645 PF00072 Response regulator receiver domain BBB50_06665 PF07690 Major Facilitator Superfamily BBB50_06670 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BBB50_06670 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BBB50_06675 PF00288 GHMP kinases N terminal domain BBB50_06675 PF08544 GHMP kinases C terminal BBB50_06675 PF10509 Galactokinase galactose-binding signature BBB50_06680 PF01263 Aldose 1-epimerase BBB50_06685 PF00990 Diguanylate cyclase, GGDEF domain BBB50_06690 PF00563 EAL domain BBB50_06690 PF00672 HAMP domain BBB50_06690 PF00990 Diguanylate cyclase, GGDEF domain BBB50_06690 PF17154 Gammaproteobacterial periplasmic sensor domain BBB50_06700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBB50_06700 PF00205 Thiamine pyrophosphate enzyme, central domain BBB50_06700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBB50_06705 PF03306 Alpha-acetolactate decarboxylase BBB50_06710 PF03466 LysR substrate binding domain BBB50_06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_06720 PF00199 Catalase BBB50_06720 PF06628 Catalase-related immune-responsive BBB50_06730 PF00080 Copper/zinc superoxide dismutase (SODC) BBB50_06735 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BBB50_06740 PF00361 Proton-conducting membrane transporter BBB50_06740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BBB50_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_06745 PF03466 LysR substrate binding domain BBB50_06750 PF13193 AMP-binding enzyme C-terminal domain BBB50_06750 PF00501 AMP-binding enzyme BBB50_06780 PF10415 Fumarase C C-terminus BBB50_06780 PF00206 Lyase BBB50_06790 PF01654 Cytochrome bd terminal oxidase subunit I BBB50_06795 PF02322 Cytochrome bd terminal oxidase subunit II BBB50_06800 PF00005 ABC transporter BBB50_06800 PF02687 FtsX-like permease family BBB50_06800 PF12704 MacB-like periplasmic core domain BBB50_06805 PF12704 MacB-like periplasmic core domain BBB50_06805 PF02687 FtsX-like permease family BBB50_06805 PF00005 ABC transporter BBB50_06810 PF12704 MacB-like periplasmic core domain BBB50_06810 PF02687 FtsX-like permease family BBB50_06810 PF00005 ABC transporter BBB50_06820 PF00529 HlyD membrane-fusion protein of T1SS BBB50_06830 PF03466 LysR substrate binding domain BBB50_06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_06835 PF00141 Peroxidase BBB50_06840 PF00232 Glycosyl hydrolase family 1 BBB50_06845 PF00356 Bacterial regulatory proteins, lacI family BBB50_06850 PF01042 Endoribonuclease L-PSP BBB50_06855 PF04074 YhcH/YjgK/YiaL BBB50_06860 PF03009 Glycerophosphoryl diester phosphodiesterase family BBB50_06865 PF00455 DeoR C terminal sensor domain BBB50_06865 PF08220 DeoR-like helix-turn-helix domain BBB50_06870 PF00005 ABC transporter BBB50_06870 PF17912 MalK OB fold domain BBB50_06875 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_06880 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_06885 PF13416 Bacterial extracellular solute-binding protein BBB50_06895 PF01618 MotA/TolQ/ExbB proton channel family BBB50_06900 PF01618 MotA/TolQ/ExbB proton channel family BBB50_06905 PF02472 Biopolymer transport protein ExbD/TolR BBB50_06910 PF03544 Gram-negative bacterial TonB protein C-terminal BBB50_06920 PF01068 ATP dependent DNA ligase domain BBB50_06920 PF14743 DNA ligase OB-like domain BBB50_06930 PF01554 MatE BBB50_06950 PF00877 NlpC/P60 family BBB50_06955 PF02743 Cache domain BBB50_06955 PF00672 HAMP domain BBB50_06955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_06970 PF00480 ROK family BBB50_06995 PF00994 Probable molybdopterin binding domain BBB50_06995 PF03454 MoeA C-terminal region (domain IV) BBB50_06995 PF03453 MoeA N-terminal region (domain I and II) BBB50_07000 PF12804 MobA-like NTP transferase domain BBB50_07005 PF08402 TOBE domain BBB50_07005 PF00005 ABC transporter BBB50_07010 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_07015 PF12849 PBP superfamily domain BBB50_07020 PF02954 Bacterial regulatory protein, Fis family BBB50_07020 PF00158 Sigma-54 interaction domain BBB50_07020 PF00072 Response regulator receiver domain BBB50_07025 PF00512 His Kinase A (phospho-acceptor) domain BBB50_07025 PF00989 PAS fold BBB50_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_07030 PF00005 ABC transporter BBB50_07030 PF12848 ABC transporter BBB50_07035 PF02634 FdhD/NarQ family BBB50_07055 PF02613 Nitrate reductase delta subunit BBB50_07065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BBB50_07065 PF00384 Molybdopterin oxidoreductase BBB50_07065 PF01568 Molydopterin dinucleotide binding domain BBB50_07070 PF13247 4Fe-4S dicluster domain BBB50_07085 PF02146 Sir2 family BBB50_07090 PF04461 Protein of unknown function (DUF520) BBB50_07095 PF00793 DAHP synthetase I family BBB50_07110 PF17783 CvfB-like winged helix domain BBB50_07110 PF13509 S1 domain BBB50_07115 PF01189 16S rRNA methyltransferase RsmB/F BBB50_07115 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BBB50_07115 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BBB50_07120 PF02470 MlaD protein BBB50_07125 PF04403 Paraquat-inducible protein A BBB50_07130 PF00005 ABC transporter BBB50_07130 PF00664 ABC transporter transmembrane region BBB50_07135 PF13185 GAF domain BBB50_07140 PF17516 ProQ C-terminal domain BBB50_07140 PF04352 ProQ/FINO family BBB50_07145 PF17804 Tail specific protease N-terminal domain BBB50_07145 PF03572 Peptidase family S41 BBB50_07145 PF00595 PDZ domain BBB50_07145 PF11818 C-terminal domain of tail specific protease (DUF3340) BBB50_07155 PF01433 Peptidase family M1 domain BBB50_07155 PF11940 Domain of unknown function (DUF3458) Ig-like fold BBB50_07155 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BBB50_07165 PF05088 Bacterial NAD-glutamate dehydrogenase BBB50_07170 PF01180 Dihydroorotate dehydrogenase BBB50_07175 PF07126 Cell-division protein ZapC BBB50_07180 PF10672 S-adenosylmethionine-dependent methyltransferase BBB50_07180 PF01170 Putative RNA methylase family UPF0020 BBB50_07180 PF02926 THUMP domain BBB50_07200 PF04957 Ribosome modulation factor BBB50_07205 PF07977 FabA-like domain BBB50_07210 PF13654 AAA domain BBB50_07210 PF05362 Lon protease (S16) C-terminal proteolytic domain BBB50_07215 PF06303 MatP N-terminal domain BBB50_07215 PF17414 MatP C-terminal ribbon-helix-helix domain BBB50_07230 PF00665 Integrase core domain BBB50_07235 PF01527 Transposase BBB50_07300 PF16671 Actin cross-linking domain BBB50_07300 PF12146 Serine aminopeptidase, S33 BBB50_07300 PF11713 Peptidase C80 family BBB50_07300 PF11647 Membrane Localization Domain BBB50_07300 PF07634 RtxA repeat BBB50_07305 PF02794 RTX toxin acyltransferase family BBB50_07315 PF03412 Peptidase C39 family BBB50_07315 PF00005 ABC transporter BBB50_07315 PF00664 ABC transporter transmembrane region BBB50_07325 PF03412 Peptidase C39 family BBB50_07325 PF00005 ABC transporter BBB50_07325 PF00664 ABC transporter transmembrane region BBB50_07330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_07330 PF00512 His Kinase A (phospho-acceptor) domain BBB50_07330 PF09308 LuxQ, periplasmic BBB50_07330 PF00072 Response regulator receiver domain BBB50_07345 PF00115 Cytochrome C and Quinol oxidase polypeptide I BBB50_07360 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BBB50_07360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BBB50_07370 PF00403 Heavy-metal-associated domain BBB50_07385 PF00027 Cyclic nucleotide-binding domain BBB50_07385 PF13545 Crp-like helix-turn-helix domain BBB50_07390 PF00582 Universal stress protein family BBB50_07395 PF01171 PP-loop family BBB50_07435 PF01336 OB-fold nucleic acid binding domain BBB50_07435 PF00152 tRNA synthetases class II (D, K and N) BBB50_07440 PF08543 Phosphomethylpyrimidine kinase BBB50_07445 PF01966 HD domain BBB50_07445 PF00672 HAMP domain BBB50_07455 PF00155 Aminotransferase class I and II BBB50_07470 PF00672 HAMP domain BBB50_07470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_07470 PF17200 Single Cache domain 2 BBB50_07485 PF00115 Cytochrome C and Quinol oxidase polypeptide I BBB50_07500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BBB50_07500 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BBB50_07510 PF00403 Heavy-metal-associated domain BBB50_07525 PF13545 Crp-like helix-turn-helix domain BBB50_07525 PF00027 Cyclic nucleotide-binding domain BBB50_07530 PF00582 Universal stress protein family BBB50_07535 PF01171 PP-loop family BBB50_07555 PF08402 TOBE domain BBB50_07555 PF00005 ABC transporter BBB50_07560 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_07565 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_07570 PF13416 Bacterial extracellular solute-binding protein BBB50_07575 PF13416 Bacterial extracellular solute-binding protein BBB50_07590 PF01235 Sodium:alanine symporter family BBB50_07595 PF01810 LysE type translocator BBB50_07625 PF05638 Type VI secretion system effector, Hcp BBB50_07630 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BBB50_07635 PF02743 Cache domain BBB50_07635 PF00672 HAMP domain BBB50_07635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_07640 PF07690 Major Facilitator Superfamily BBB50_07645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_07645 PF00529 HlyD membrane-fusion protein of T1SS BBB50_07650 PF02321 Outer membrane efflux protein BBB50_07660 PF00270 DEAD/DEAH box helicase BBB50_07660 PF00271 Helicase conserved C-terminal domain BBB50_07665 PF13426 PAS domain BBB50_07665 PF08447 PAS fold BBB50_07665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_07670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_07670 PF00672 HAMP domain BBB50_07670 PF12729 Four helix bundle sensory module for signal transduction BBB50_07675 PF00672 HAMP domain BBB50_07675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_07675 PF17202 Single cache domain 3 BBB50_07680 PF01584 CheW-like domain BBB50_07685 PF00072 Response regulator receiver domain BBB50_07685 PF01339 CheB methylesterase BBB50_07695 PF01739 CheR methyltransferase, SAM binding domain BBB50_07695 PF03705 CheR methyltransferase, all-alpha domain BBB50_07700 PF01584 CheW-like domain BBB50_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_07700 PF01627 Hpt domain BBB50_07700 PF00072 Response regulator receiver domain BBB50_07705 PF01584 CheW-like domain BBB50_07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_07705 PF07194 P2 response regulator binding domain BBB50_07705 PF02895 Signal transducing histidine kinase, homodimeric domain BBB50_07705 PF01627 Hpt domain BBB50_07720 PF00672 HAMP domain BBB50_07720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_07725 PF00893 Small Multidrug Resistance protein BBB50_07730 PF03441 FAD binding domain of DNA photolyase BBB50_07730 PF00875 DNA photolyase BBB50_07735 PF07690 Major Facilitator Superfamily BBB50_07740 PF03466 LysR substrate binding domain BBB50_07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_07750 PF03099 Biotin/lipoate A/B protein ligase family BBB50_07750 PF10437 Bacterial lipoate protein ligase C-terminus BBB50_07755 PF00012 Hsp70 protein BBB50_07765 PF00270 DEAD/DEAH box helicase BBB50_07765 PF00271 Helicase conserved C-terminal domain BBB50_07765 PF04408 Helicase associated domain (HA2) BBB50_07765 PF11898 Domain of unknown function (DUF3418) BBB50_07765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BBB50_07795 PF00563 EAL domain BBB50_07795 PF00990 Diguanylate cyclase, GGDEF domain BBB50_07795 PF03707 Bacterial signalling protein N terminal repeat BBB50_07805 PF00012 Hsp70 protein BBB50_07810 PF00012 Hsp70 protein BBB50_07815 PF00990 Diguanylate cyclase, GGDEF domain BBB50_07815 PF17158 Membrane-associated sensor, integral membrane domain BBB50_07825 PF00990 Diguanylate cyclase, GGDEF domain BBB50_07825 PF03707 Bacterial signalling protein N terminal repeat BBB50_07825 PF00563 EAL domain BBB50_07845 PF06508 Queuosine biosynthesis protein QueC BBB50_07850 PF04055 Radical SAM superfamily BBB50_07860 PF10414 Sirohaem synthase dimerisation region BBB50_07860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBB50_07860 PF14824 Sirohaem biosynthesis protein central BBB50_07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_07870 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_07875 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_07880 PF00005 ABC transporter BBB50_07885 PF01027 Inhibitor of apoptosis-promoting Bax1 BBB50_07890 PF04358 DsrC like protein BBB50_07895 PF00708 Acylphosphatase BBB50_07900 PF17785 PUA-like domain BBB50_07900 PF10672 S-adenosylmethionine-dependent methyltransferase BBB50_07905 PF00990 Diguanylate cyclase, GGDEF domain BBB50_07915 PF00462 Glutaredoxin BBB50_07915 PF08534 Redoxin BBB50_07920 PF00672 HAMP domain BBB50_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_07920 PF00072 Response regulator receiver domain BBB50_07920 PF01627 Hpt domain BBB50_07920 PF00512 His Kinase A (phospho-acceptor) domain BBB50_07920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BBB50_07925 PF00072 Response regulator receiver domain BBB50_07930 PF02798 Glutathione S-transferase, N-terminal domain BBB50_07930 PF14497 Glutathione S-transferase, C-terminal domain BBB50_07940 PF04209 homogentisate 1,2-dioxygenase BBB50_07945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_07950 PF01546 Peptidase family M20/M25/M40 BBB50_07950 PF07687 Peptidase dimerisation domain BBB50_07965 PF16177 Acetyl-coenzyme A synthetase N-terminus BBB50_07965 PF00501 AMP-binding enzyme BBB50_07965 PF13193 AMP-binding enzyme C-terminal domain BBB50_07970 PF04303 PrpF protein BBB50_07975 PF00694 Aconitase C-terminal domain BBB50_07975 PF00330 Aconitase family (aconitate hydratase) BBB50_07980 PF00285 Citrate synthase, C-terminal domain BBB50_07990 PF07729 FCD domain BBB50_07990 PF00392 Bacterial regulatory proteins, gntR family BBB50_08005 PF01970 Tripartite tricarboxylate transporter TctA family BBB50_08020 PF02653 Branched-chain amino acid transport system / permease component BBB50_08025 PF00005 ABC transporter BBB50_08035 PF13407 Periplasmic binding protein domain BBB50_08060 PF00486 Transcriptional regulatory protein, C terminal BBB50_08060 PF00072 Response regulator receiver domain BBB50_08065 PF00512 His Kinase A (phospho-acceptor) domain BBB50_08065 PF00672 HAMP domain BBB50_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_08070 PF06629 MltA-interacting protein MipA BBB50_08075 PF04393 Protein of unknown function (DUF535) BBB50_08080 PF00072 Response regulator receiver domain BBB50_08080 PF00158 Sigma-54 interaction domain BBB50_08080 PF02954 Bacterial regulatory protein, Fis family BBB50_08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_08085 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_08085 PF00512 His Kinase A (phospho-acceptor) domain BBB50_08090 PF00939 Sodium:sulfate symporter transmembrane region BBB50_08095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_08095 PF00672 HAMP domain BBB50_08100 PF00842 Alanine racemase, C-terminal domain BBB50_08100 PF01168 Alanine racemase, N-terminal domain BBB50_08105 PF00892 EamA-like transporter family BBB50_08115 PF13302 Acetyltransferase (GNAT) domain BBB50_08120 PF00158 Sigma-54 interaction domain BBB50_08120 PF18024 Helix-turn-helix domain BBB50_08125 PF05128 Domain of unknown function (DUF697) BBB50_08130 PF04317 YcjX-like family, DUF463 BBB50_08145 PF04715 Anthranilate synthase component I, N terminal region BBB50_08145 PF00425 chorismate binding enzyme BBB50_08150 PF00293 NUDIX domain BBB50_08155 PF03222 Tryptophan/tyrosine permease family BBB50_08160 PF03313 Serine dehydratase alpha chain BBB50_08160 PF03315 Serine dehydratase beta chain BBB50_08165 PF01242 6-pyruvoyl tetrahydropterin synthase BBB50_08170 PF00672 HAMP domain BBB50_08170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_08175 PF00152 tRNA synthetases class II (D, K and N) BBB50_08175 PF01336 OB-fold nucleic acid binding domain BBB50_08180 PF08543 Phosphomethylpyrimidine kinase BBB50_08185 PF00672 HAMP domain BBB50_08185 PF01966 HD domain BBB50_08195 PF00155 Aminotransferase class I and II BBB50_08210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_08210 PF00672 HAMP domain BBB50_08210 PF17200 Single Cache domain 2 BBB50_08215 PF04349 Periplasmic glucan biosynthesis protein, MdoG BBB50_08220 PF13506 Glycosyl transferase family 21 BBB50_08225 PF00356 Bacterial regulatory proteins, lacI family BBB50_08230 PF04794 YdjC-like protein BBB50_08235 PF11975 Family 4 glycosyl hydrolase C-terminal domain BBB50_08235 PF02056 Family 4 glycosyl hydrolase BBB50_08240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BBB50_08245 PF02378 Phosphotransferase system, EIIC BBB50_08250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBB50_08255 PF01522 Polysaccharide deacetylase BBB50_08260 PF02028 BCCT, betaine/carnitine/choline family transporter BBB50_08265 PF01047 MarR family BBB50_08270 PF00196 Bacterial regulatory proteins, luxR family BBB50_08270 PF00072 Response regulator receiver domain BBB50_08275 PF07730 Histidine kinase BBB50_08275 PF17200 Single Cache domain 2 BBB50_08280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BBB50_08290 PF03480 Bacterial extracellular solute-binding protein, family 7 BBB50_08305 PF00753 Metallo-beta-lactamase superfamily BBB50_08310 PF05951 Bacterial protein of unknown function (DUF882) BBB50_08315 PF01471 Putative peptidoglycan binding domain BBB50_08315 PF03734 L,D-transpeptidase catalytic domain BBB50_08340 PF00925 GTP cyclohydrolase II BBB50_08350 PF07690 Major Facilitator Superfamily BBB50_08365 PF00521 DNA gyrase/topoisomerase IV, subunit A BBB50_08365 PF03989 DNA gyrase C-terminal domain, beta-propeller BBB50_08375 PF00317 Ribonucleotide reductase, all-alpha domain BBB50_08375 PF03477 ATP cone domain BBB50_08375 PF02867 Ribonucleotide reductase, barrel domain BBB50_08380 PF00268 Ribonucleotide reductase, small chain BBB50_08385 PF00970 Oxidoreductase FAD-binding domain BBB50_08385 PF00111 2Fe-2S iron-sulfur cluster binding domain BBB50_08385 PF00175 Oxidoreductase NAD-binding domain BBB50_08395 PF00994 Probable molybdopterin binding domain BBB50_08410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_08410 PF00672 HAMP domain BBB50_08410 PF17200 Single Cache domain 2 BBB50_08425 PF00005 ABC transporter BBB50_08430 PF01032 FecCD transport family BBB50_08435 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BBB50_08445 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BBB50_08450 PF02654 Cobalamin-5-phosphate synthase BBB50_08455 PF02277 Phosphoribosyltransferase BBB50_08460 PF01641 SelR domain BBB50_08470 PF08411 Exonuclease C-terminal BBB50_08470 PF00929 Exonuclease BBB50_08475 PF03788 LrgA family BBB50_08480 PF04172 LrgB-like family BBB50_08485 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BBB50_08485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BBB50_08495 PF02222 ATP-grasp domain BBB50_08505 PF05724 Thiopurine S-methyltransferase (TPMT) BBB50_08520 PF00216 Bacterial DNA-binding protein BBB50_08525 PF03484 tRNA synthetase B5 domain BBB50_08525 PF03147 Ferredoxin-fold anticodon binding domain BBB50_08525 PF01588 Putative tRNA binding domain BBB50_08525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BBB50_08525 PF03483 B3/4 domain BBB50_08530 PF01409 tRNA synthetases class II core domain (F) BBB50_08530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BBB50_08540 PF00072 Response regulator receiver domain BBB50_08540 PF00990 Diguanylate cyclase, GGDEF domain BBB50_08565 PF01066 CDP-alcohol phosphatidyltransferase BBB50_08570 PF08459 UvrC Helix-hairpin-helix N-terminal BBB50_08570 PF02151 UvrB/uvrC motif BBB50_08570 PF01541 GIY-YIG catalytic domain BBB50_08575 PF00072 Response regulator receiver domain BBB50_08575 PF00196 Bacterial regulatory proteins, luxR family BBB50_08580 PF03104 DNA polymerase family B, exonuclease domain BBB50_08580 PF00136 DNA polymerase family B BBB50_08585 PF00990 Diguanylate cyclase, GGDEF domain BBB50_08585 PF13426 PAS domain BBB50_08585 PF00563 EAL domain BBB50_08595 PF09285 Elongation factor P, C-terminal BBB50_08595 PF08207 Elongation factor P (EF-P) KOW-like domain BBB50_08595 PF01132 Elongation factor P (EF-P) OB domain BBB50_08600 PF04269 Protein of unknown function, DUF440 BBB50_08610 PF00392 Bacterial regulatory proteins, gntR family BBB50_08610 PF07702 UTRA domain BBB50_08615 PF01979 Amidohydrolase family BBB50_08620 PF00491 Arginase family BBB50_08625 PF01175 Urocanase Rossmann-like domain BBB50_08625 PF17392 Urocanase C-terminal domain BBB50_08625 PF17391 Urocanase N-terminal domain BBB50_08630 PF00221 Aromatic amino acid lyase BBB50_08640 PF00089 Trypsin BBB50_08645 PF04191 Phospholipid methyltransferase BBB50_08650 PF01565 FAD binding domain BBB50_08650 PF02913 FAD linked oxidases, C-terminal domain BBB50_08650 PF13183 4Fe-4S dicluster domain BBB50_08665 PF00691 OmpA family BBB50_08665 PF13488 Glycine zipper BBB50_08685 PF01259 SAICAR synthetase BBB50_08695 PF03949 Malic enzyme, NAD binding domain BBB50_08695 PF00390 Malic enzyme, N-terminal domain BBB50_08705 PF02698 DUF218 domain BBB50_08710 PF08448 PAS fold BBB50_08710 PF00990 Diguanylate cyclase, GGDEF domain BBB50_08715 PF00266 Aminotransferase class-V BBB50_08725 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_08730 PF00664 ABC transporter transmembrane region BBB50_08730 PF00005 ABC transporter BBB50_08735 PF00664 ABC transporter transmembrane region BBB50_08735 PF00005 ABC transporter BBB50_08740 PF01479 S4 domain BBB50_08740 PF00849 RNA pseudouridylate synthase BBB50_08745 PF01300 Telomere recombination BBB50_08750 PF02811 PHP domain BBB50_08755 PF08056 Tryptophan operon leader peptide BBB50_08760 PF04715 Anthranilate synthase component I, N terminal region BBB50_08760 PF00425 chorismate binding enzyme BBB50_08765 PF00117 Glutamine amidotransferase class-I BBB50_08770 PF02885 Glycosyl transferase family, helical bundle domain BBB50_08770 PF00591 Glycosyl transferase family, a/b domain BBB50_08775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BBB50_08775 PF00218 Indole-3-glycerol phosphate synthase BBB50_08780 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_08785 PF00290 Tryptophan synthase alpha chain BBB50_08790 PF00375 Sodium:dicarboxylate symporter family BBB50_08795 PF00265 Thymidine kinase BBB50_08800 PF00152 tRNA synthetases class II (D, K and N) BBB50_08800 PF02938 GAD domain BBB50_08800 PF01336 OB-fold nucleic acid binding domain BBB50_08805 PF01904 Protein of unknown function DUF72 BBB50_08810 PF13649 Methyltransferase domain BBB50_08815 PF08003 Protein of unknown function (DUF1698) BBB50_08820 PF18030 RimK PreATP-grasp domain BBB50_08820 PF08443 RimK-like ATP-grasp domain BBB50_08835 PF00266 Aminotransferase class-V BBB50_08845 PF00512 His Kinase A (phospho-acceptor) domain BBB50_08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_08845 PF00989 PAS fold BBB50_08860 PF04994 TfoX C-terminal domain BBB50_08860 PF04993 TfoX N-terminal domain BBB50_08870 PF03956 Lysine exporter LysO BBB50_08880 PF00282 Pyridoxal-dependent decarboxylase conserved domain BBB50_08885 PF01418 Helix-turn-helix domain, rpiR family BBB50_08885 PF01380 SIS domain BBB50_08890 PF00465 Iron-containing alcohol dehydrogenase BBB50_08890 PF00171 Aldehyde dehydrogenase family BBB50_08895 PF00462 Glutaredoxin BBB50_08900 PF02080 TrkA-C domain BBB50_08900 PF06826 Predicted Permease Membrane Region BBB50_08905 PF02861 Clp amino terminal domain, pathogenicity island component BBB50_08905 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_08905 PF17871 AAA lid domain BBB50_08905 PF10431 C-terminal, D2-small domain, of ClpB protein BBB50_08905 PF07724 AAA domain (Cdc48 subfamily) BBB50_08910 PF02617 ATP-dependent Clp protease adaptor protein ClpS BBB50_08915 PF00313 'Cold-shock' DNA-binding domain BBB50_08920 PF03971 Monomeric isocitrate dehydrogenase BBB50_08925 PF00849 RNA pseudouridylate synthase BBB50_08930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BBB50_08930 PF01502 Phosphoribosyl-AMP cyclohydrolase BBB50_08935 PF00977 Histidine biosynthesis protein BBB50_08940 PF00977 Histidine biosynthesis protein BBB50_08945 PF00117 Glutamine amidotransferase class-I BBB50_08950 PF08645 Polynucleotide kinase 3 phosphatase BBB50_08950 PF00475 Imidazoleglycerol-phosphate dehydratase BBB50_08955 PF00155 Aminotransferase class I and II BBB50_08960 PF00815 Histidinol dehydrogenase BBB50_08965 PF08029 HisG, C-terminal domain BBB50_08965 PF01634 ATP phosphoribosyltransferase BBB50_08970 PF03553 Na+/H+ antiporter family BBB50_08975 PF00816 H-NS histone family BBB50_08980 PF00294 pfkB family carbohydrate kinase BBB50_08990 PF04356 Protein of unknown function (DUF489) BBB50_08995 PF08328 Adenylosuccinate lyase C-terminal BBB50_08995 PF00206 Lyase BBB50_09005 PF16036 Chalcone isomerase-like BBB50_09030 PF00106 short chain dehydrogenase BBB50_09040 PF01435 Peptidase family M48 BBB50_09055 PF08241 Methyltransferase domain BBB50_09060 PF00155 Aminotransferase class I and II BBB50_09065 PF04055 Radical SAM superfamily BBB50_09065 PF06968 Biotin and Thiamin Synthesis associated domain BBB50_09070 PF00202 Aminotransferase class-III BBB50_09075 PF02403 Seryl-tRNA synthetase N-terminal domain BBB50_09075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBB50_09080 PF12002 MgsA AAA+ ATPase C terminal BBB50_09080 PF16193 AAA C-terminal domain BBB50_09080 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_09085 PF03548 Outer membrane lipoprotein carrier protein LolA BBB50_09090 PF01043 SecA preprotein cross-linking domain BBB50_09090 PF07516 SecA Wing and Scaffold domain BBB50_09090 PF02810 SEC-C motif BBB50_09090 PF07517 SecA DEAD-like domain BBB50_09095 PF01207 Dihydrouridine synthase (Dus) BBB50_09100 PF00990 Diguanylate cyclase, GGDEF domain BBB50_09105 PF00005 ABC transporter BBB50_09110 PF02653 Branched-chain amino acid transport system / permease component BBB50_09120 PF09905 DNA-binding protein VF530 BBB50_09125 PF04217 Protein of unknown function, DUF412 BBB50_09130 PF00871 Acetokinase family BBB50_09135 PF01515 Phosphate acetyl/butaryl transferase BBB50_09135 PF07085 DRTGG domain BBB50_09140 PF13409 Glutathione S-transferase, N-terminal domain BBB50_09145 PF00005 ABC transporter BBB50_09145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_09150 PF00005 ABC transporter BBB50_09150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_09155 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_09155 PF12911 N-terminal TM domain of oligopeptide transport permease C BBB50_09160 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_09165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_09175 PF00512 His Kinase A (phospho-acceptor) domain BBB50_09175 PF08448 PAS fold BBB50_09175 PF13188 PAS domain BBB50_09175 PF00072 Response regulator receiver domain BBB50_09180 PF00158 Sigma-54 interaction domain BBB50_09180 PF00072 Response regulator receiver domain BBB50_09180 PF02954 Bacterial regulatory protein, Fis family BBB50_09185 PF00990 Diguanylate cyclase, GGDEF domain BBB50_09185 PF03707 Bacterial signalling protein N terminal repeat BBB50_09185 PF13188 PAS domain BBB50_09185 PF00563 EAL domain BBB50_09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_09190 PF00512 His Kinase A (phospho-acceptor) domain BBB50_09195 PF13426 PAS domain BBB50_09195 PF00989 PAS fold BBB50_09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_09195 PF00512 His Kinase A (phospho-acceptor) domain BBB50_09195 PF13188 PAS domain BBB50_09205 PF00072 Response regulator receiver domain BBB50_09220 PF03481 Putative GTP-binding controlling metal-binding BBB50_09220 PF01300 Telomere recombination BBB50_09240 PF01161 Phosphatidylethanolamine-binding protein BBB50_09250 PF06483 Chitinase C BBB50_09250 PF00704 Glycosyl hydrolases family 18 BBB50_09265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBB50_09265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBB50_09270 PF01022 Bacterial regulatory protein, arsR family BBB50_09280 PF00990 Diguanylate cyclase, GGDEF domain BBB50_09280 PF08448 PAS fold BBB50_09290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BBB50_09305 PF13404 AsnC-type helix-turn-helix domain BBB50_09305 PF01037 Lrp/AsnC ligand binding domain BBB50_09310 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_09315 PF01343 Peptidase family S49 BBB50_09315 PF08496 Peptidase family S49 N-terminal BBB50_09320 PF00106 short chain dehydrogenase BBB50_09325 PF03692 Putative zinc- or iron-chelating domain BBB50_09330 PF03692 Putative zinc- or iron-chelating domain BBB50_09335 PF13662 Toprim domain BBB50_09335 PF02132 RecR protein BBB50_09340 PF02575 YbaB/EbfC DNA-binding family BBB50_09345 PF12169 DNA polymerase III subunits gamma and tau domain III BBB50_09345 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BBB50_09345 PF12170 DNA polymerase III tau subunit V interacting with alpha BBB50_09350 PF00156 Phosphoribosyl transferase domain BBB50_09355 PF04304 Protein of unknown function (DUF454) BBB50_09365 PF00072 Response regulator receiver domain BBB50_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_09370 PF03466 LysR substrate binding domain BBB50_09375 PF00881 Nitroreductase family BBB50_09380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BBB50_09380 PF00378 Enoyl-CoA hydratase/isomerase BBB50_09380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BBB50_09385 PF00108 Thiolase, N-terminal domain BBB50_09385 PF02803 Thiolase, C-terminal domain BBB50_09390 PF04542 Sigma-70 region 2 BBB50_09390 PF08281 Sigma-70, region 4 BBB50_09400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BBB50_09405 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BBB50_09410 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBB50_09415 PF12557 Cob(I)alamin adenosyltransferase N terminal BBB50_09415 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BBB50_09420 PF05170 AsmA family BBB50_09425 PF00485 Phosphoribulokinase / Uridine kinase family BBB50_09435 PF10609 NUBPL iron-transfer P-loop NTPase BBB50_09440 PF01588 Putative tRNA binding domain BBB50_09440 PF09334 tRNA synthetases class I (M) BBB50_09450 PF01048 Phosphorylase superfamily BBB50_09455 PF00403 Heavy-metal-associated domain BBB50_09465 PF03061 Thioesterase superfamily BBB50_09465 PF00571 CBS domain BBB50_09465 PF00392 Bacterial regulatory proteins, gntR family BBB50_09465 PF07085 DRTGG domain BBB50_09470 PF00990 Diguanylate cyclase, GGDEF domain BBB50_09470 PF07694 5TMR of 5TMR-LYT BBB50_09475 PF02391 MoaE protein BBB50_09480 PF02597 ThiS family BBB50_09485 PF01967 MoaC family BBB50_09490 PF00994 Probable molybdopterin binding domain BBB50_09495 PF06463 Molybdenum Cofactor Synthesis C BBB50_09495 PF04055 Radical SAM superfamily BBB50_09500 PF01933 Uncharacterised protein family UPF0052 BBB50_09505 PF01627 Hpt domain BBB50_09510 PF02954 Bacterial regulatory protein, Fis family BBB50_09510 PF00072 Response regulator receiver domain BBB50_09510 PF00158 Sigma-54 interaction domain BBB50_09520 PF00271 Helicase conserved C-terminal domain BBB50_09520 PF04851 Type III restriction enzyme, res subunit BBB50_09520 PF02151 UvrB/uvrC motif BBB50_09520 PF12344 Ultra-violet resistance protein B BBB50_09520 PF17757 UvrB interaction domain BBB50_09530 PF02508 Rnf-Nqr subunit, membrane protein BBB50_09535 PF04060 Putative Fe-S cluster BBB50_09540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBB50_09540 PF12838 4Fe-4S dicluster domain BBB50_09540 PF13375 RnfC Barrel sandwich hybrid domain BBB50_09540 PF10531 SLBB domain BBB50_09545 PF03116 NQR2, RnfD, RnfE family BBB50_09550 PF04205 FMN-binding domain BBB50_09555 PF02508 Rnf-Nqr subunit, membrane protein BBB50_09560 PF00633 Helix-hairpin-helix motif BBB50_09560 PF10576 Iron-sulfur binding domain of endonuclease III BBB50_09560 PF00730 HhH-GPD superfamily base excision DNA repair protein BBB50_09565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_09570 PF10952 Protein of unknown function (DUF2753) BBB50_09575 PF00691 OmpA family BBB50_09575 PF18393 MotY N-terminal domain BBB50_09585 PF00929 Exonuclease BBB50_09590 PF13726 Na+-H+ antiporter family BBB50_09590 PF03553 Na+/H+ antiporter family BBB50_09595 PF00156 Phosphoribosyl transferase domain BBB50_09600 PF02674 Colicin V production protein BBB50_09605 PF05036 Sporulation related domain BBB50_09610 PF02875 Mur ligase family, glutamate ligase domain BBB50_09610 PF08245 Mur ligase middle domain BBB50_09615 PF01039 Carboxyl transferase domain BBB50_09615 PF17848 Acetyl-coA carboxylase zinc finger domain BBB50_09620 PF01416 tRNA pseudouridine synthase BBB50_09630 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBB50_09630 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BBB50_09635 PF02378 Phosphotransferase system, EIIC BBB50_09635 PF00367 phosphotransferase system, EIIB BBB50_09635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBB50_09640 PF01979 Amidohydrolase family BBB50_09645 PF00480 ROK family BBB50_09645 PF01047 MarR family BBB50_09650 PF02254 TrkA-N domain BBB50_09650 PF00999 Sodium/hydrogen exchanger family BBB50_09655 PF13537 Glutamine amidotransferase domain BBB50_09655 PF00733 Asparagine synthase BBB50_09660 PF02357 Transcription termination factor nusG BBB50_09665 PF00854 POT family BBB50_09670 PF00762 Ferrochelatase BBB50_09675 PF05191 Adenylate kinase, active site lid BBB50_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_09680 PF00183 Hsp90 protein BBB50_09685 PF00486 Transcriptional regulatory protein, C terminal BBB50_09690 PF17323 Trans-membrane regulatory protein ToxS BBB50_09700 PF12850 Calcineurin-like phosphoesterase superfamily domain BBB50_09705 PF08338 Domain of unknown function (DUF1731) BBB50_09705 PF01370 NAD dependent epimerase/dehydratase family BBB50_09710 PF00106 short chain dehydrogenase BBB50_09715 PF00085 Thioredoxin BBB50_09720 PF16200 C-terminal region of band_7 BBB50_09720 PF01145 SPFH domain / Band 7 family BBB50_09725 PF01957 NfeD-like C-terminal, partner-binding BBB50_09730 PF13411 MerR HTH family regulatory protein BBB50_09740 PF13609 Gram-negative porin BBB50_09745 PF00533 BRCA1 C Terminus (BRCT) domain BBB50_09745 PF01653 NAD-dependent DNA ligase adenylation domain BBB50_09745 PF03120 NAD-dependent DNA ligase OB-fold domain BBB50_09745 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BBB50_09745 PF12826 Helix-hairpin-helix motif BBB50_09750 PF04354 ZipA, C-terminal FtsZ-binding domain BBB50_09760 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_09770 PF00381 PTS HPr component phosphorylation site BBB50_09775 PF02896 PEP-utilising enzyme, TIM barrel domain BBB50_09775 PF05524 PEP-utilising enzyme, N-terminal BBB50_09775 PF00391 PEP-utilising enzyme, mobile domain BBB50_09780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBB50_09785 PF01494 FAD binding domain BBB50_09790 PF00919 Uncharacterized protein family UPF0004 BBB50_09790 PF04055 Radical SAM superfamily BBB50_09790 PF01938 TRAM domain BBB50_09795 PF02562 PhoH-like protein BBB50_09800 PF02130 Uncharacterized protein family UPF0054 BBB50_09805 PF03471 Transporter associated domain BBB50_09805 PF00571 CBS domain BBB50_09810 PF00795 Carbon-nitrogen hydrolase BBB50_09815 PF07295 Zinc-ribbon containing domain BBB50_09820 PF08264 Anticodon-binding domain of tRNA BBB50_09820 PF00133 tRNA synthetases class I (I, L, M and V) BBB50_09820 PF13603 Leucyl-tRNA synthetase, Domain 2 BBB50_09825 PF04390 Lipopolysaccharide-assembly BBB50_09830 PF06144 DNA polymerase III, delta subunit BBB50_09830 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BBB50_09840 PF02590 Predicted SPOUT methyltransferase BBB50_09845 PF00905 Penicillin binding protein transpeptidase domain BBB50_09845 PF03717 Penicillin-binding Protein dimerisation domain BBB50_09850 PF01098 Cell cycle protein BBB50_09855 PF05036 Sporulation related domain BBB50_09855 PF03330 Lytic transglycolase BBB50_09860 PF00768 D-alanyl-D-alanine carboxypeptidase BBB50_09860 PF07943 Penicillin-binding protein 5, C-terminal domain BBB50_09865 PF04359 Protein of unknown function (DUF493) BBB50_09870 PF03099 Biotin/lipoate A/B protein ligase family BBB50_09875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BBB50_09875 PF04055 Radical SAM superfamily BBB50_09885 PF00464 Serine hydroxymethyltransferase BBB50_09905 PF02706 Chain length determinant protein BBB50_09905 PF13614 AAA domain BBB50_09905 PF13807 G-rich domain on putative tyrosine kinase BBB50_09910 PF02563 Polysaccharide biosynthesis/export protein BBB50_09910 PF10531 SLBB domain BBB50_09910 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BBB50_09920 PF02397 Bacterial sugar transferase BBB50_09935 PF17945 Beta/Gamma crystallin BBB50_09935 PF12561 ToxR activated gene A lipoprotein domain BBB50_09950 PF03808 Glycosyl transferase WecB/TagA/CpsF family BBB50_09960 PF00534 Glycosyl transferases group 1 BBB50_09960 PF00862 Sucrose synthase BBB50_09970 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_09990 PF14602 Hexapeptide repeat of succinyl-transferase BBB50_09990 PF12464 Maltose acetyltransferase BBB50_09995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BBB50_09995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BBB50_09995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BBB50_10000 PF02350 UDP-N-acetylglucosamine 2-epimerase BBB50_10005 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBB50_10010 PF00873 AcrB/AcrD/AcrF family BBB50_10015 PF13533 Biotin-lipoyl like BBB50_10040 PF00128 Alpha amylase, catalytic domain BBB50_10040 PF16657 Maltogenic Amylase, C-terminal domain BBB50_10045 PF02378 Phosphotransferase system, EIIC BBB50_10045 PF00367 phosphotransferase system, EIIB BBB50_10050 PF00356 Bacterial regulatory proteins, lacI family BBB50_10060 PF00005 ABC transporter BBB50_10060 PF09383 NIL domain BBB50_10065 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_10070 PF03180 NLPA lipoprotein BBB50_10075 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BBB50_10080 PF07348 Syd protein (SUKH-2) BBB50_10085 PF14489 QueF-like protein BBB50_10085 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BBB50_10095 PF00990 Diguanylate cyclase, GGDEF domain BBB50_10100 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BBB50_10100 PF03641 Possible lysine decarboxylase BBB50_10100 PF11892 Domain of unknown function (DUF3412) BBB50_10105 PF01367 5'-3' exonuclease, C-terminal SAM fold BBB50_10105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BBB50_10110 PF04241 Protein of unknown function (DUF423) BBB50_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_10115 PF03466 LysR substrate binding domain BBB50_10125 PF02568 Thiamine biosynthesis protein (ThiI) BBB50_10125 PF02926 THUMP domain BBB50_10135 PF01618 MotA/TolQ/ExbB proton channel family BBB50_10140 PF02609 Exonuclease VII small subunit BBB50_10145 PF00348 Polyprenyl synthetase BBB50_10150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BBB50_10150 PF02779 Transketolase, pyrimidine binding domain BBB50_10150 PF02780 Transketolase, C-terminal domain BBB50_10155 PF00849 RNA pseudouridylate synthase BBB50_10160 PF04287 tRNA pseudouridine synthase C BBB50_10175 PF13302 Acetyltransferase (GNAT) domain BBB50_10185 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BBB50_10190 PF03806 AbgT putative transporter family BBB50_10195 PF00444 Ribosomal protein L36 BBB50_10200 PF01197 Ribosomal protein L31 BBB50_10205 PF18389 TrmO C-terminal domain BBB50_10205 PF01980 tRNA-methyltransferase O BBB50_10210 PF03129 Anticodon binding domain BBB50_10210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBB50_10210 PF04073 Aminoacyl-tRNA editing domain BBB50_10225 PF06786 Uncharacterised protein family (UPF0253) BBB50_10235 PF01797 Transposase IS200 like BBB50_10240 PF02769 AIR synthase related protein, C-terminal domain BBB50_10240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BBB50_10240 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BBB50_10250 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_10250 PF01464 Transglycosylase SLT domain BBB50_10260 PF14437 MafB19-like deaminase BBB50_10265 PF03806 AbgT putative transporter family BBB50_10295 PF07963 Prokaryotic N-terminal methylation motif BBB50_10295 PF00114 Pilin (bacterial filament) BBB50_10300 PF01556 DnaJ C terminal domain BBB50_10300 PF00684 DnaJ central domain BBB50_10300 PF00226 DnaJ domain BBB50_10305 PF00012 Hsp70 protein BBB50_10310 PF01025 GrpE BBB50_10315 PF01513 ATP-NAD kinase BBB50_10320 PF02463 RecF/RecN/SMC N terminal domain BBB50_10325 PF04355 SmpA / OmlA family BBB50_10330 PF03658 RnfH family Ubiquitin BBB50_10335 PF03364 Polyketide cyclase / dehydrase and lipid transport BBB50_10340 PF01668 SmpB protein BBB50_10350 PF13356 Arm DNA-binding domain BBB50_10350 PF00589 Phage integrase family BBB50_10360 PF13322 Domain of unknown function (DUF4092) BBB50_10360 PF17291 N-terminal domain of M60-like peptidases BBB50_10360 PF13402 Peptidase M60, enhancin and enhancin-like BBB50_10370 PF01551 Peptidase family M23 BBB50_10370 PF04225 Opacity-associated protein A LysM-like domain BBB50_10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_10385 PF00672 HAMP domain BBB50_10385 PF02743 Cache domain BBB50_10390 PF06750 Bacterial Peptidase A24 N-terminal domain BBB50_10390 PF01478 Type IV leader peptidase family BBB50_10395 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family BBB50_10400 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F BBB50_10405 PF00482 Type II secretion system (T2SS), protein F BBB50_10410 PF00437 Type II/IV secretion system protein BBB50_10415 PF17456 Toxin-coregulated pilus protein S BBB50_10435 PF10671 Toxin co-regulated pilus biosynthesis protein Q BBB50_10445 PF07963 Prokaryotic N-terminal methylation motif BBB50_10445 PF05946 Toxin-coregulated pilus subunit TcpA BBB50_10455 PF00486 Transcriptional regulatory protein, C terminal BBB50_10460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_10465 PF08534 Redoxin BBB50_10485 PF00171 Aldehyde dehydrogenase family BBB50_10495 PF13737 Transposase DDE domain BBB50_10560 PF11953 Domain of unknown function (DUF3470) BBB50_10560 PF00037 4Fe-4S binding domain BBB50_10565 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBB50_10565 PF00588 SpoU rRNA Methylase family BBB50_10575 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BBB50_10580 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BBB50_10585 PF04223 Citrate lyase, alpha subunit (CitF) BBB50_10590 PF03328 HpcH/HpaI aldolase/citrate lyase family BBB50_10595 PF06857 Malonate decarboxylase delta subunit (MdcD) BBB50_10600 PF08218 Citrate lyase ligase C-terminal domain BBB50_10605 PF03390 2-hydroxycarboxylate transporter family BBB50_10610 PF04277 Oxaloacetate decarboxylase, gamma chain BBB50_10615 PF00682 HMGL-like BBB50_10615 PF02436 Conserved carboxylase domain BBB50_10615 PF00364 Biotin-requiring enzyme BBB50_10620 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BBB50_10625 PF17203 Single cache domain 3 BBB50_10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_10630 PF00072 Response regulator receiver domain BBB50_10630 PF12431 Transcriptional regulator BBB50_10645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_10645 PF03466 LysR substrate binding domain BBB50_10650 PF01266 FAD dependent oxidoreductase BBB50_10655 PF01235 Sodium:alanine symporter family BBB50_10660 PF14864 Alkyl sulfatase C-terminal BBB50_10660 PF14863 Alkyl sulfatase dimerisation BBB50_10660 PF00753 Metallo-beta-lactamase superfamily BBB50_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_10665 PF03466 LysR substrate binding domain BBB50_10670 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BBB50_10670 PF01648 4'-phosphopantetheinyl transferase superfamily BBB50_10675 PF00005 ABC transporter BBB50_10680 PF01032 FecCD transport family BBB50_10685 PF01032 FecCD transport family BBB50_10690 PF01497 Periplasmic binding protein BBB50_10705 PF00425 chorismate binding enzyme BBB50_10710 PF13193 AMP-binding enzyme C-terminal domain BBB50_10710 PF00501 AMP-binding enzyme BBB50_10715 PF00857 Isochorismatase family BBB50_10715 PF00550 Phosphopantetheine attachment site BBB50_10720 PF01184 GPR1/FUN34/yaaH family BBB50_10725 PF06483 Chitinase C BBB50_10725 PF00704 Glycosyl hydrolases family 18 BBB50_10730 PF00117 Glutamine amidotransferase class-I BBB50_10730 PF00958 GMP synthase C terminal domain BBB50_10730 PF02540 NAD synthase BBB50_10735 PF00571 CBS domain BBB50_10735 PF00478 IMP dehydrogenase / GMP reductase domain BBB50_10740 PF13742 OB-fold nucleic acid binding domain BBB50_10740 PF02601 Exonuclease VII, large subunit BBB50_10755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BBB50_10755 PF01926 50S ribosome-binding GTPase BBB50_10760 PF13360 PQQ-like domain BBB50_10765 PF09976 Tetratricopeptide repeat-like domain BBB50_10770 PF03129 Anticodon binding domain BBB50_10770 PF13393 Histidyl-tRNA synthetase BBB50_10775 PF04551 GcpE protein BBB50_10780 PF13464 Domain of unknown function (DUF4115) BBB50_10785 PF04055 Radical SAM superfamily BBB50_10790 PF00334 Nucleoside diphosphate kinase BBB50_10795 PF12404 Peptidase BBB50_10795 PF00883 Cytosol aminopeptidase family, catalytic domain BBB50_10800 PF04384 Iron-sulphur cluster assembly BBB50_10805 PF00111 2Fe-2S iron-sulfur cluster binding domain BBB50_10810 PF00012 Hsp70 protein BBB50_10815 PF07743 HSCB C-terminal oligomerisation domain BBB50_10815 PF00226 DnaJ domain BBB50_10820 PF01521 Iron-sulphur cluster biosynthesis BBB50_10825 PF01592 NifU-like N terminal domain BBB50_10830 PF00266 Aminotransferase class-V BBB50_10835 PF02082 Transcriptional regulator BBB50_10840 PF00588 SpoU rRNA Methylase family BBB50_10845 PF00459 Inositol monophosphatase family BBB50_10850 PF07549 SecD/SecF GG Motif BBB50_10850 PF02355 Protein export membrane protein BBB50_10855 PF02355 Protein export membrane protein BBB50_10855 PF13721 SecD export protein N-terminal TM region BBB50_10855 PF07549 SecD/SecF GG Motif BBB50_10860 PF02699 Preprotein translocase subunit BBB50_10865 PF01702 Queuine tRNA-ribosyltransferase BBB50_10875 PF02547 Queuosine biosynthesis protein BBB50_10880 PF00571 CBS domain BBB50_10885 PF00463 Isocitrate lyase family BBB50_10890 PF01274 Malate synthase BBB50_10895 PF03466 LysR substrate binding domain BBB50_10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_10900 PF10417 C-terminal domain of 1-Cys peroxiredoxin BBB50_10900 PF00578 AhpC/TSA family BBB50_10905 PF03932 CutC family BBB50_10910 PF03976 Polyphosphate kinase 2 (PPK2) BBB50_10915 PF01895 PhoU domain BBB50_10920 PF00005 ABC transporter BBB50_10925 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_10930 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_10935 PF13089 Polyphosphate kinase N-terminal domain BBB50_10935 PF17941 Polyphosphate kinase C-terminal domain 1 BBB50_10935 PF13090 Polyphosphate kinase C-terminal domain 2 BBB50_10935 PF02503 Polyphosphate kinase middle domain BBB50_10940 PF02541 Ppx/GppA phosphatase family BBB50_10945 PF12849 PBP superfamily domain BBB50_10950 PF00989 PAS fold BBB50_10950 PF11808 Phosphate regulon sensor protein PhoR BBB50_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_10950 PF00512 His Kinase A (phospho-acceptor) domain BBB50_10955 PF00486 Transcriptional regulatory protein, C terminal BBB50_10955 PF00072 Response regulator receiver domain BBB50_10960 PF04381 Putative exonuclease, RdgC BBB50_10970 PF00037 4Fe-4S binding domain BBB50_10975 PF00881 Nitroreductase family BBB50_11015 PF10431 C-terminal, D2-small domain, of ClpB protein BBB50_11015 PF02861 Clp amino terminal domain, pathogenicity island component BBB50_11015 PF17871 AAA lid domain BBB50_11015 PF07724 AAA domain (Cdc48 subfamily) BBB50_11015 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_11025 PF01479 S4 domain BBB50_11025 PF00849 RNA pseudouridylate synthase BBB50_11030 PF13525 Outer membrane lipoprotein BBB50_11035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BBB50_11040 PF00800 Prephenate dehydratase BBB50_11040 PF01817 Chorismate mutase type II BBB50_11045 PF13416 Bacterial extracellular solute-binding protein BBB50_11050 PF00563 EAL domain BBB50_11050 PF00990 Diguanylate cyclase, GGDEF domain BBB50_11055 PF01931 Protein of unknown function DUF84 BBB50_11060 PF01371 Trp repressor protein BBB50_11065 PF01464 Transglycosylase SLT domain BBB50_11065 PF14718 Soluble lytic murein transglycosylase L domain BBB50_11070 PF00005 ABC transporter BBB50_11070 PF12848 ABC transporter BBB50_11075 PF07238 PilZ domain BBB50_11080 PF02153 Prephenate dehydrogenase BBB50_11080 PF01817 Chorismate mutase type II BBB50_11085 PF00793 DAHP synthetase I family BBB50_11090 PF06580 Histidine kinase BBB50_11090 PF07694 5TMR of 5TMR-LYT BBB50_11095 PF04397 LytTr DNA-binding domain BBB50_11095 PF00072 Response regulator receiver domain BBB50_11100 PF00933 Glycosyl hydrolase family 3 N terminal domain BBB50_11105 PF03702 Anhydro-N-acetylmuramic acid kinase BBB50_11110 PF13580 SIS domain BBB50_11125 PF02554 Carbon starvation protein CstA BBB50_11130 PF02401 LytB protein BBB50_11135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBB50_11140 PF01252 Signal peptidase (SPase) II BBB50_11145 PF08264 Anticodon-binding domain of tRNA BBB50_11145 PF00133 tRNA synthetases class I (I, L, M and V) BBB50_11145 PF06827 Zinc finger found in FPG and IleRS BBB50_11150 PF06574 FAD synthetase BBB50_11150 PF01687 Riboflavin kinase BBB50_11155 PF03023 Lipid II flippase MurJ BBB50_11160 PF01649 Ribosomal protein S20 BBB50_11165 PF01022 Bacterial regulatory protein, arsR family BBB50_11170 PF03466 LysR substrate binding domain BBB50_11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_11175 PF02690 Na+/Pi-cotransporter BBB50_11180 PF00303 Thymidylate synthase BBB50_11185 PF01790 Prolipoprotein diacylglyceryl transferase BBB50_11190 PF01925 Sulfite exporter TauE/SafE BBB50_11195 PF01590 GAF domain BBB50_11195 PF05524 PEP-utilising enzyme, N-terminal BBB50_11195 PF00391 PEP-utilising enzyme, mobile domain BBB50_11195 PF02896 PEP-utilising enzyme, TIM barrel domain BBB50_11200 PF00293 NUDIX domain BBB50_11210 PF02976 DNA mismatch repair enzyme MutH BBB50_11215 PF00248 Aldo/keto reductase family BBB50_11225 PF00158 Sigma-54 interaction domain BBB50_11225 PF00072 Response regulator receiver domain BBB50_11225 PF02954 Bacterial regulatory protein, Fis family BBB50_11230 PF01336 OB-fold nucleic acid binding domain BBB50_11230 PF00152 tRNA synthetases class II (D, K and N) BBB50_11235 PF03462 PCRF domain BBB50_11235 PF00472 RF-1 domain BBB50_11240 PF05525 Branched-chain amino acid transport protein BBB50_11245 PF05175 Methyltransferase small domain BBB50_11250 PF00270 DEAD/DEAH box helicase BBB50_11250 PF00271 Helicase conserved C-terminal domain BBB50_11255 PF16658 Class II release factor RF3, C-terminal domain BBB50_11255 PF03144 Elongation factor Tu domain 2 BBB50_11255 PF00009 Elongation factor Tu GTP binding domain BBB50_11260 PF00563 EAL domain BBB50_11260 PF00990 Diguanylate cyclase, GGDEF domain BBB50_11260 PF03707 Bacterial signalling protein N terminal repeat BBB50_11275 PF13508 Acetyltransferase (GNAT) domain BBB50_11285 PF03707 Bacterial signalling protein N terminal repeat BBB50_11285 PF00990 Diguanylate cyclase, GGDEF domain BBB50_11285 PF00563 EAL domain BBB50_11310 PF13181 Tetratricopeptide repeat BBB50_11310 PF07719 Tetratricopeptide repeat BBB50_11315 PF00575 S1 RNA binding domain BBB50_11315 PF03725 3' exoribonuclease family, domain 2 BBB50_11315 PF00013 KH domain BBB50_11315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BBB50_11315 PF01138 3' exoribonuclease family, domain 1 BBB50_11320 PF00312 Ribosomal protein S15 BBB50_11325 PF16198 tRNA pseudouridylate synthase B C-terminal domain BBB50_11325 PF09157 Pseudouridine synthase II TruB, C-terminal BBB50_11325 PF01509 TruB family pseudouridylate synthase (N terminal domain) BBB50_11330 PF02033 Ribosome-binding factor A BBB50_11335 PF04760 Translation initiation factor IF-2, N-terminal region BBB50_11335 PF00009 Elongation factor Tu GTP binding domain BBB50_11335 PF08364 Bacterial translation initiation factor IF-2 associated region BBB50_11335 PF11987 Translation-initiation factor 2 BBB50_11340 PF00575 S1 RNA binding domain BBB50_11340 PF08529 NusA N-terminal domain BBB50_11340 PF13184 NusA-like KH domain BBB50_11345 PF17384 RimP C-terminal SH3 domain BBB50_11345 PF02576 RimP N-terminal domain BBB50_11360 PF03840 Preprotein translocase SecG subunit BBB50_11365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBB50_11365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBB50_11365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBB50_11365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBB50_11370 PF00809 Pterin binding enzyme BBB50_11375 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_11375 PF06480 FtsH Extracellular BBB50_11375 PF17862 AAA+ lid domain BBB50_11375 PF01434 Peptidase family M41 BBB50_11380 PF01728 FtsJ-like methyltransferase BBB50_11385 PF01985 CRS1 / YhbY (CRM) domain BBB50_11390 PF01272 Transcription elongation factor, GreA/GreB, C-term BBB50_11390 PF03449 Transcription elongation factor, N-terminal BBB50_11395 PF13609 Gram-negative porin BBB50_11400 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BBB50_11405 PF01479 S4 domain BBB50_11405 PF00579 tRNA synthetases class I (W and Y) BBB50_11410 PF01551 Peptidase family M23 BBB50_11410 PF04225 Opacity-associated protein A LysM-like domain BBB50_11415 PF00873 AcrB/AcrD/AcrF family BBB50_11425 PF01521 Iron-sulphur cluster biosynthesis BBB50_11430 PF00202 Aminotransferase class-III BBB50_11440 PF01594 AI-2E family transporter BBB50_11445 PF08468 Methyltransferase small domain N-terminal BBB50_11445 PF05175 Methyltransferase small domain BBB50_11450 PF00072 Response regulator receiver domain BBB50_11450 PF00512 His Kinase A (phospho-acceptor) domain BBB50_11450 PF09308 LuxQ, periplasmic BBB50_11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_11460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_11465 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_11470 PF12911 N-terminal TM domain of oligopeptide transport permease C BBB50_11470 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_11475 PF00005 ABC transporter BBB50_11475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_11480 PF00005 ABC transporter BBB50_11480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_11490 PF01869 BadF/BadG/BcrA/BcrD ATPase family BBB50_11495 PF02838 Glycosyl hydrolase family 20, domain 2 BBB50_11495 PF00728 Glycosyl hydrolase family 20, catalytic domain BBB50_11500 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BBB50_11500 PF06165 Glycosyltransferase family 36 BBB50_11505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBB50_11505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBB50_11505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBB50_11505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBB50_11510 PF08402 TOBE domain BBB50_11510 PF00005 ABC transporter BBB50_11520 PF13416 Bacterial extracellular solute-binding protein BBB50_11525 PF00909 Ammonium Transporter Family BBB50_11530 PF00543 Nitrogen regulatory protein P-II BBB50_11535 PF06062 Uncharacterised protein family (UPF0231) BBB50_11540 PF11791 Aconitate B N-terminal domain BBB50_11540 PF00330 Aconitase family (aconitate hydratase) BBB50_11540 PF06434 Aconitate hydratase 2 N-terminus BBB50_11545 PF01734 Patatin-like phospholipase BBB50_11550 PF14814 Bifunctional transglycosylase second domain BBB50_11550 PF00912 Transglycosylase BBB50_11550 PF00905 Penicillin binding protein transpeptidase domain BBB50_11555 PF04408 Helicase associated domain (HA2) BBB50_11555 PF08482 ATP-dependent helicase C-terminal BBB50_11555 PF00270 DEAD/DEAH box helicase BBB50_11555 PF00271 Helicase conserved C-terminal domain BBB50_11565 PF03749 Sugar fermentation stimulation protein RE domain BBB50_11565 PF17746 SfsA N-terminal OB domain BBB50_11570 PF01258 Prokaryotic dksA/traR C4-type zinc finger BBB50_11575 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBB50_11580 PF01743 Poly A polymerase head domain BBB50_11580 PF12626 Polymerase A arginine-rich C-terminus BBB50_11580 PF12627 Probable RNA and SrmB- binding site of polymerase A BBB50_11585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BBB50_11590 PF02548 Ketopantoate hydroxymethyltransferase BBB50_11595 PF02569 Pantoate-beta-alanine ligase BBB50_11600 PF01061 ABC-2 type transporter BBB50_11605 PF00005 ABC transporter BBB50_11610 PF00916 Sulfate permease family BBB50_11610 PF01740 STAS domain BBB50_11615 PF00484 Carbonic anhydrase BBB50_11620 PF00156 Phosphoribosyl transferase domain BBB50_11625 PF00440 Bacterial regulatory proteins, tetR family BBB50_11630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBB50_11635 PF04348 LppC putative lipoprotein BBB50_11640 PF02021 Uncharacterised protein family UPF0102 BBB50_11645 PF13580 SIS domain BBB50_11650 PF04972 BON domain BBB50_11655 PF04386 Stringent starvation protein B BBB50_11660 PF00043 Glutathione S-transferase, C-terminal domain BBB50_11660 PF02798 Glutathione S-transferase, N-terminal domain BBB50_11665 PF02167 Cytochrome C1 family BBB50_11670 PF00033 Cytochrome b/b6/petB BBB50_11670 PF00032 Cytochrome b(C-terminal)/b6/petD BBB50_11675 PF00355 Rieske [2Fe-2S] domain BBB50_11675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BBB50_11680 PF00380 Ribosomal protein S9/S16 BBB50_11685 PF00572 Ribosomal protein L13 BBB50_11695 PF03969 AFG1-like ATPase BBB50_11705 PF00595 PDZ domain BBB50_11710 PF13180 PDZ domain BBB50_11715 PF01245 Ribosomal protein L19 BBB50_11720 PF01746 tRNA (Guanine-1)-methyltransferase BBB50_11725 PF01782 RimM N-terminal domain BBB50_11725 PF05239 PRC-barrel domain BBB50_11730 PF00886 Ribosomal protein S16 BBB50_11735 PF00448 SRP54-type protein, GTPase domain BBB50_11735 PF02881 SRP54-type protein, helical bundle domain BBB50_11735 PF02978 Signal peptide binding domain BBB50_11740 PF01578 Cytochrome C assembly protein BBB50_11745 PF01595 Cyclin M transmembrane N-terminal domain BBB50_11745 PF03471 Transporter associated domain BBB50_11745 PF00571 CBS domain BBB50_11750 PF02664 S-Ribosylhomocysteinase (LuxS) BBB50_11755 PF04262 Glutamate-cysteine ligase BBB50_11760 PF00675 Insulinase (Peptidase family M16) BBB50_11760 PF05193 Peptidase M16 inactive domain BBB50_11765 PF09335 SNARE associated Golgi protein BBB50_11775 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BBB50_11780 PF00364 Biotin-requiring enzyme BBB50_11780 PF02436 Conserved carboxylase domain BBB50_11780 PF00682 HMGL-like BBB50_11785 PF04277 Oxaloacetate decarboxylase, gamma chain BBB50_11830 PF02599 Global regulator protein family BBB50_11835 PF00696 Amino acid kinase family BBB50_11835 PF01842 ACT domain BBB50_11835 PF13840 ACT domain BBB50_11840 PF01411 tRNA synthetases class II (A) BBB50_11840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBB50_11840 PF02272 DHHA1 domain BBB50_11845 PF02631 RecX family BBB50_11850 PF00154 recA bacterial DNA recombination protein BBB50_11855 PF02464 Competence-damaged protein BBB50_11860 PF00005 ABC transporter BBB50_11860 PF12857 TOBE-like domain BBB50_11865 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_11870 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_11880 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_11885 PF05190 MutS family domain IV BBB50_11885 PF05192 MutS domain III BBB50_11885 PF05188 MutS domain II BBB50_11885 PF01624 MutS domain I BBB50_11885 PF00488 MutS domain V BBB50_11890 PF04542 Sigma-70 region 2 BBB50_11890 PF04539 Sigma-70 region 3 BBB50_11890 PF04545 Sigma-70, region 4 BBB50_11890 PF00140 Sigma-70 factor, region 1.2 BBB50_11895 PF01476 LysM domain BBB50_11895 PF01551 Peptidase family M23 BBB50_11905 PF01975 Survival protein SurE BBB50_11910 PF01142 tRNA pseudouridine synthase D (TruD) BBB50_11915 PF02542 YgbB family BBB50_11920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BBB50_11925 PF04977 Septum formation initiator BBB50_11930 PF02673 Bacitracin resistance protein BacA BBB50_11935 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BBB50_11940 PF02152 Dihydroneopterin aldolase BBB50_11945 PF02660 Glycerol-3-phosphate acyltransferase BBB50_11950 PF00561 alpha/beta hydrolase fold BBB50_11955 PF00814 Glycoprotease family BBB50_11960 PF01165 Ribosomal protein S21 BBB50_11965 PF09424 Yqey-like protein BBB50_11970 PF10410 DnaB-helicase binding domain of primase BBB50_11970 PF08278 DNA primase DnaG DnaB-binding BBB50_11970 PF08275 DNA primase catalytic core, N-terminal domain BBB50_11970 PF01807 CHC2 zinc finger BBB50_11975 PF04546 Sigma-70, non-essential region BBB50_11975 PF04539 Sigma-70 region 3 BBB50_11975 PF04545 Sigma-70, region 4 BBB50_11975 PF04542 Sigma-70 region 2 BBB50_11975 PF03979 Sigma-70 factor, region 1.1 BBB50_11975 PF00140 Sigma-70 factor, region 1.2 BBB50_11990 PF03480 Bacterial extracellular solute-binding protein, family 7 BBB50_11995 PF01380 SIS domain BBB50_12000 PF08220 DeoR-like helix-turn-helix domain BBB50_12000 PF00455 DeoR C terminal sensor domain BBB50_12005 PF00224 Pyruvate kinase, barrel domain BBB50_12005 PF02887 Pyruvate kinase, alpha/beta domain BBB50_12010 PF04402 Protein of unknown function (DUF541) BBB50_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_12015 PF03466 LysR substrate binding domain BBB50_12020 PF01810 LysE type translocator BBB50_12025 PF00924 Mechanosensitive ion channel BBB50_12025 PF05552 Conserved TM helix BBB50_12035 PF01116 Fructose-bisphosphate aldolase class-II BBB50_12040 PF00162 Phosphoglycerate kinase BBB50_12045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBB50_12045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBB50_12050 PF07715 TonB-dependent Receptor Plug Domain BBB50_12050 PF00593 TonB dependent receptor BBB50_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_12055 PF03466 LysR substrate binding domain BBB50_12060 PF00456 Transketolase, thiamine diphosphate binding domain BBB50_12060 PF02780 Transketolase, C-terminal domain BBB50_12060 PF02779 Transketolase, pyrimidine binding domain BBB50_12070 PF02773 S-adenosylmethionine synthetase, C-terminal domain BBB50_12070 PF02772 S-adenosylmethionine synthetase, central domain BBB50_12070 PF00438 S-adenosylmethionine synthetase, N-terminal domain BBB50_12075 PF17283 SprT-like zinc ribbon domain BBB50_12075 PF10263 SprT-like family BBB50_12080 PF04231 Endonuclease I BBB50_12085 PF04452 RNA methyltransferase BBB50_12090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BBB50_12090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BBB50_12095 PF02622 Uncharacterized ACR, COG1678 BBB50_12100 PF03652 Holliday junction resolvase BBB50_12105 PF00579 tRNA synthetases class I (W and Y) BBB50_12105 PF01479 S4 domain BBB50_12115 PF00437 Type II/IV secretion system protein BBB50_12120 PF00437 Type II/IV secretion system protein BBB50_12125 PF01168 Alanine racemase, N-terminal domain BBB50_12130 PF14748 Pyrroline-5-carboxylate reductase dimerisation BBB50_12130 PF03807 NADP oxidoreductase coenzyme F420-dependent BBB50_12135 PF02325 YGGT family BBB50_12140 PF02594 Uncharacterised ACR, YggU family COG1872 BBB50_12150 PF01725 Ham1 family BBB50_12155 PF06969 HemN C-terminal domain BBB50_12155 PF04055 Radical SAM superfamily BBB50_12160 PF04960 Glutaminase BBB50_12165 PF02390 Putative methyltransferase BBB50_12170 PF10576 Iron-sulfur binding domain of endonuclease III BBB50_12170 PF14815 NUDIX domain BBB50_12170 PF00730 HhH-GPD superfamily base excision DNA repair protein BBB50_12170 PF00633 Helix-hairpin-helix motif BBB50_12175 PF04362 Bacterial Fe(2+) trafficking BBB50_12180 PF01464 Transglycosylase SLT domain BBB50_12180 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BBB50_12205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_12205 PF12729 Four helix bundle sensory module for signal transduction BBB50_12205 PF00672 HAMP domain BBB50_12235 PF00226 DnaJ domain BBB50_12235 PF05099 Tellurite resistance protein TerB BBB50_12240 PF04453 LPS transport system D BBB50_12240 PF03968 OstA-like protein BBB50_12245 PF09312 SurA N-terminal domain BBB50_12250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BBB50_12255 PF00398 Ribosomal RNA adenine dimethylase BBB50_12260 PF04379 ApaG domain BBB50_12265 PF00149 Calcineurin-like phosphoesterase BBB50_12270 PF00186 Dihydrofolate reductase BBB50_12275 PF12821 Threonine/Serine exporter, ThrE BBB50_12280 PF06738 Putative threonine/serine exporter BBB50_12285 PF01926 50S ribosome-binding GTPase BBB50_12285 PF01018 GTP1/OBG BBB50_12290 PF01016 Ribosomal L27 protein BBB50_12295 PF00829 Ribosomal prokaryotic L21 protein BBB50_12300 PF00348 Polyprenyl synthetase BBB50_12305 PF13520 Amino acid permease BBB50_12310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BBB50_12310 PF00056 lactate/malate dehydrogenase, NAD binding domain BBB50_12315 PF01316 Arginine repressor, DNA binding domain BBB50_12315 PF02863 Arginine repressor, C-terminal domain BBB50_12320 PF16868 NMT1-like family BBB50_12330 PF00582 Universal stress protein family BBB50_12345 PF06877 Regulator of ribonuclease activity B BBB50_12355 PF01523 Putative modulator of DNA gyrase BBB50_12360 PF00795 Carbon-nitrogen hydrolase BBB50_12365 PF13502 AsmA-like C-terminal region BBB50_12365 PF13116 Protein of unknown function BBB50_12370 PF00575 S1 RNA binding domain BBB50_12370 PF10150 Ribonuclease E/G family BBB50_12375 PF02545 Maf-like protein BBB50_12380 PF04093 rod shape-determining protein MreD BBB50_12385 PF04085 rod shape-determining protein MreC BBB50_12420 PF00114 Pilin (bacterial filament) BBB50_12420 PF07963 Prokaryotic N-terminal methylation motif BBB50_12425 PF07963 Prokaryotic N-terminal methylation motif BBB50_12425 PF00114 Pilin (bacterial filament) BBB50_12435 PF00482 Type II secretion system (T2SS), protein F BBB50_12440 PF00437 Type II/IV secretion system protein BBB50_12450 PF01471 Putative peptidoglycan binding domain BBB50_12450 PF13401 AAA domain BBB50_12455 PF11741 AMIN domain BBB50_12455 PF00263 Bacterial type II and III secretion system protein BBB50_12455 PF07660 Secretin and TonB N terminus short domain BBB50_12455 PF03958 Bacterial type II/III secretion system short domain BBB50_12475 PF00990 Diguanylate cyclase, GGDEF domain BBB50_12475 PF17157 Gammaproteobacterial periplasmic sensor domain BBB50_12475 PF00563 EAL domain BBB50_12480 PF00436 Single-strand binding protein family BBB50_12485 PF00196 Bacterial regulatory proteins, luxR family BBB50_12490 PF00483 Nucleotidyl transferase BBB50_12495 PF17755 UvrA DNA-binding domain BBB50_12495 PF17760 UvrA interaction domain BBB50_12495 PF00005 ABC transporter BBB50_12505 PF00266 Aminotransferase class-V BBB50_12510 PF01842 ACT domain BBB50_12510 PF00696 Amino acid kinase family BBB50_12515 PF02965 Vitamin B12 dependent methionine synthase, activation domain BBB50_12515 PF00809 Pterin binding enzyme BBB50_12515 PF02310 B12 binding domain BBB50_12515 PF02607 B12 binding domain BBB50_12515 PF02574 Homocysteine S-methyltransferase BBB50_12520 PF00999 Sodium/hydrogen exchanger family BBB50_12590 PF01507 Phosphoadenosine phosphosulfate reductase family BBB50_12595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BBB50_12595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BBB50_12600 PF00258 Flavodoxin BBB50_12600 PF00667 FAD binding domain BBB50_12600 PF00175 Oxidoreductase NAD-binding domain BBB50_12620 PF09583 Phage shock protein G (Phageshock_PspG) BBB50_12625 PF01207 Dihydrouridine synthase (Dus) BBB50_12630 PF01475 Ferric uptake regulator family BBB50_12640 PF12706 Beta-lactamase superfamily domain BBB50_12645 PF00342 Phosphoglucose isomerase BBB50_12650 PF01894 Uncharacterised protein family UPF0047 BBB50_12655 PF01168 Alanine racemase, N-terminal domain BBB50_12655 PF00842 Alanine racemase, C-terminal domain BBB50_12660 PF03796 DnaB-like helicase C terminal domain BBB50_12660 PF00772 DnaB-like helicase N terminal domain BBB50_12670 PF01281 Ribosomal protein L9, N-terminal domain BBB50_12670 PF03948 Ribosomal protein L9, C-terminal domain BBB50_12675 PF01084 Ribosomal protein S18 BBB50_12680 PF00436 Single-strand binding protein family BBB50_12685 PF01250 Ribosomal protein S6 BBB50_12690 PF00210 Ferritin-like domain BBB50_12695 PF04324 BFD-like [2Fe-2S] binding domain BBB50_12700 PF03144 Elongation factor Tu domain 2 BBB50_12700 PF03143 Elongation factor Tu C-terminal domain BBB50_12700 PF00009 Elongation factor Tu GTP binding domain BBB50_12705 PF14492 Elongation Factor G, domain II BBB50_12705 PF00679 Elongation factor G C-terminus BBB50_12705 PF03144 Elongation factor Tu domain 2 BBB50_12705 PF03764 Elongation factor G, domain IV BBB50_12705 PF00009 Elongation factor Tu GTP binding domain BBB50_12710 PF00177 Ribosomal protein S7p/S5e BBB50_12715 PF00164 Ribosomal protein S12/S23 BBB50_12725 PF02635 DsrE/DsrF-like family BBB50_12730 PF02635 DsrE/DsrF-like family BBB50_12735 PF08348 YheO-like PAS domain BBB50_12735 PF13309 HTH domain BBB50_12740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BBB50_12740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBB50_12750 PF04102 SlyX BBB50_12755 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BBB50_12760 PF01145 SPFH domain / Band 7 family BBB50_12765 PF01145 SPFH domain / Band 7 family BBB50_12765 PF12221 Bacterial membrane protein N terminal BBB50_12770 PF13167 GTP-binding GTPase N-terminal BBB50_12770 PF01926 50S ribosome-binding GTPase BBB50_12770 PF16360 GTP-binding GTPase Middle Region BBB50_12775 PF17209 Hfq protein BBB50_12785 PF01119 DNA mismatch repair protein, C-terminal domain BBB50_12785 PF08676 MutL C terminal dimerisation domain BBB50_12790 PF01520 N-acetylmuramoyl-L-alanine amidase BBB50_12795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BBB50_12800 PF08331 Domain of unknown function (DUF1730) BBB50_12845 PF00929 Exonuclease BBB50_12850 PF03193 RsgA GTPase BBB50_12855 PF02666 Phosphatidylserine decarboxylase BBB50_12860 PF00939 Sodium:sulfate symporter transmembrane region BBB50_12870 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BBB50_12870 PF01676 Metalloenzyme superfamily BBB50_12875 PF01551 Peptidase family M23 BBB50_12885 PF08360 QacR-like protein, C-terminal region BBB50_12885 PF00440 Bacterial regulatory proteins, tetR family BBB50_12890 PF01208 Uroporphyrinogen decarboxylase (URO-D) BBB50_12895 PF00293 NUDIX domain BBB50_12895 PF09297 NADH pyrophosphatase zinc ribbon domain BBB50_12900 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BBB50_12905 PF04983 RNA polymerase Rpb1, domain 3 BBB50_12905 PF04997 RNA polymerase Rpb1, domain 1 BBB50_12905 PF00623 RNA polymerase Rpb1, domain 2 BBB50_12905 PF04998 RNA polymerase Rpb1, domain 5 BBB50_12905 PF05000 RNA polymerase Rpb1, domain 4 BBB50_12910 PF04561 RNA polymerase Rpb2, domain 2 BBB50_12910 PF04563 RNA polymerase beta subunit BBB50_12910 PF10385 RNA polymerase beta subunit external 1 domain BBB50_12910 PF00562 RNA polymerase Rpb2, domain 6 BBB50_12910 PF04560 RNA polymerase Rpb2, domain 7 BBB50_12910 PF04565 RNA polymerase Rpb2, domain 3 BBB50_12915 PF00542 Ribosomal protein L7/L12 C-terminal domain BBB50_12915 PF16320 Ribosomal protein L7/L12 dimerisation domain BBB50_12920 PF00466 Ribosomal protein L10 BBB50_12925 PF00687 Ribosomal protein L1p/L10e family BBB50_12930 PF03946 Ribosomal protein L11, N-terminal domain BBB50_12930 PF00298 Ribosomal protein L11, RNA binding domain BBB50_12935 PF00467 KOW motif BBB50_12935 PF02357 Transcription termination factor nusG BBB50_12940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BBB50_12945 PF03144 Elongation factor Tu domain 2 BBB50_12945 PF00009 Elongation factor Tu GTP binding domain BBB50_12945 PF03143 Elongation factor Tu C-terminal domain BBB50_12970 PF00485 Phosphoribulokinase / Uridine kinase family BBB50_12975 PF02237 Biotin protein ligase C terminal domain BBB50_12975 PF08279 HTH domain BBB50_12975 PF03099 Biotin/lipoate A/B protein ligase family BBB50_12980 PF01565 FAD binding domain BBB50_12980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BBB50_12995 PF13091 PLD-like domain BBB50_13035 PF00175 Oxidoreductase NAD-binding domain BBB50_13040 PF00970 Oxidoreductase FAD-binding domain BBB50_13040 PF00111 2Fe-2S iron-sulfur cluster binding domain BBB50_13040 PF00175 Oxidoreductase NAD-binding domain BBB50_13045 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BBB50_13055 PF07497 Rho termination factor, RNA-binding domain BBB50_13055 PF07498 Rho termination factor, N-terminal domain BBB50_13055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBB50_13060 PF00085 Thioredoxin BBB50_13065 PF00270 DEAD/DEAH box helicase BBB50_13065 PF00271 Helicase conserved C-terminal domain BBB50_13070 PF02541 Ppx/GppA phosphatase family BBB50_13075 PF09456 RcsC Alpha-Beta-Loop (ABL) BBB50_13075 PF00512 His Kinase A (phospho-acceptor) domain BBB50_13075 PF00072 Response regulator receiver domain BBB50_13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_13080 PF12832 MFS_1 like family BBB50_13100 PF16177 Acetyl-coenzyme A synthetase N-terminus BBB50_13100 PF13193 AMP-binding enzyme C-terminal domain BBB50_13100 PF00501 AMP-binding enzyme BBB50_13105 PF01220 Dehydroquinase class II BBB50_13110 PF00364 Biotin-requiring enzyme BBB50_13115 PF00289 Biotin carboxylase, N-terminal domain BBB50_13115 PF02785 Biotin carboxylase C-terminal domain BBB50_13115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBB50_13125 PF01207 Dihydrouridine synthase (Dus) BBB50_13130 PF02954 Bacterial regulatory protein, Fis family BBB50_13135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBB50_13135 PF00356 Bacterial regulatory proteins, lacI family BBB50_13140 PF00920 Dehydratase family BBB50_13145 PF01202 Shikimate kinase BBB50_13150 PF02447 GntP family permease BBB50_13155 PF01081 KDPG and KHG aldolase BBB50_13160 PF07715 TonB-dependent Receptor Plug Domain BBB50_13160 PF00593 TonB dependent receptor BBB50_13170 PF17200 Single Cache domain 2 BBB50_13170 PF00672 HAMP domain BBB50_13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_13175 PF01276 Orn/Lys/Arg decarboxylase, major domain BBB50_13175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BBB50_13175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BBB50_13180 PF13520 Amino acid permease BBB50_13185 PF00486 Transcriptional regulatory protein, C terminal BBB50_13185 PF18500 CadC C-terminal domain 1 BBB50_13190 PF13411 MerR HTH family regulatory protein BBB50_13195 PF02142 MGS-like domain BBB50_13195 PF01808 AICARFT/IMPCHase bienzyme BBB50_13200 PF02844 Phosphoribosylglycinamide synthetase, N domain BBB50_13200 PF02843 Phosphoribosylglycinamide synthetase, C domain BBB50_13200 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BBB50_13210 PF00216 Bacterial DNA-binding protein BBB50_13220 PF00571 CBS domain BBB50_13220 PF01595 Cyclin M transmembrane N-terminal domain BBB50_13225 PF00480 ROK family BBB50_13230 PF01238 Phosphomannose isomerase type I BBB50_13235 PF04222 Protein of unknown function (DUF416) BBB50_13240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBB50_13245 PF03167 Uracil DNA glycosylase superfamily BBB50_13250 PF00924 Mechanosensitive ion channel BBB50_13255 PF10996 Beta-Casp domain BBB50_13255 PF00753 Metallo-beta-lactamase superfamily BBB50_13255 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BBB50_13260 PF02397 Bacterial sugar transferase BBB50_13265 PF01370 NAD dependent epimerase/dehydratase family BBB50_13270 PF02719 Polysaccharide biosynthesis protein BBB50_13290 PF01609 Transposase DDE domain BBB50_13290 PF13808 DDE_Tnp_1-associated BBB50_13295 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_13305 PF00171 Aldehyde dehydrogenase family BBB50_13305 PF00465 Iron-containing alcohol dehydrogenase BBB50_13310 PF00501 AMP-binding enzyme BBB50_13310 PF13193 AMP-binding enzyme C-terminal domain BBB50_13320 PF00005 ABC transporter BBB50_13320 PF14524 Wzt C-terminal domain BBB50_13335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BBB50_13340 PF16363 GDP-mannose 4,6 dehydratase BBB50_13345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBB50_13345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBB50_13345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBB50_13345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBB50_13350 PF00483 Nucleotidyl transferase BBB50_13350 PF01050 Mannose-6-phosphate isomerase BBB50_13355 PF01370 NAD dependent epimerase/dehydratase family BBB50_13360 PF01522 Polysaccharide deacetylase BBB50_13360 PF00457 Glycosyl hydrolases family 11 BBB50_13375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BBB50_13385 PF04488 Glycosyltransferase sugar-binding region containing DXD motif BBB50_13390 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BBB50_13425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BBB50_13430 PF00535 Glycosyl transferase family 2 BBB50_13435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BBB50_13440 PF01467 Cytidylyltransferase-like BBB50_13445 PF06827 Zinc finger found in FPG and IleRS BBB50_13445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BBB50_13445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BBB50_13455 PF00471 Ribosomal protein L33 BBB50_13460 PF00830 Ribosomal L28 family BBB50_13465 PF04002 RadC-like JAB domain BBB50_13470 PF02743 Cache domain BBB50_13470 PF00672 HAMP domain BBB50_13470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_13475 PF02441 Flavoprotein BBB50_13475 PF04127 DNA / pantothenate metabolism flavoprotein BBB50_13480 PF00440 Bacterial regulatory proteins, tetR family BBB50_13485 PF03279 Bacterial lipid A biosynthesis acyltransferase BBB50_13490 PF03279 Bacterial lipid A biosynthesis acyltransferase BBB50_13495 PF00156 Phosphoribosyl transferase domain BBB50_13500 PF01138 3' exoribonuclease family, domain 1 BBB50_13500 PF03725 3' exoribonuclease family, domain 2 BBB50_13505 PF03755 YicC-like family, N-terminal region BBB50_13505 PF08340 Domain of unknown function (DUF1732) BBB50_13510 PF03350 Uncharacterized protein family, UPF0114 BBB50_13515 PF02378 Phosphotransferase system, EIIC BBB50_13515 PF00367 phosphotransferase system, EIIB BBB50_13520 PF13580 SIS domain BBB50_13530 PF01418 Helix-turn-helix domain, rpiR family BBB50_13530 PF01380 SIS domain BBB50_13535 PF01032 FecCD transport family BBB50_13540 PF01497 Periplasmic binding protein BBB50_13545 PF00005 ABC transporter BBB50_13550 PF07715 TonB-dependent Receptor Plug Domain BBB50_13550 PF00593 TonB dependent receptor BBB50_13555 PF00005 ABC transporter BBB50_13555 PF00664 ABC transporter transmembrane region BBB50_13570 PF00270 DEAD/DEAH box helicase BBB50_13570 PF00570 HRDC domain BBB50_13570 PF00271 Helicase conserved C-terminal domain BBB50_13570 PF16124 RecQ zinc-binding BBB50_13570 PF09382 RQC domain BBB50_13575 PF00892 EamA-like transporter family BBB50_13585 PF12833 Helix-turn-helix domain BBB50_13590 PF01810 LysE type translocator BBB50_13595 PF00580 UvrD/REP helicase N-terminal domain BBB50_13595 PF13361 UvrD-like helicase C-terminal domain BBB50_13600 PF01432 Peptidase family M3 BBB50_13605 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BBB50_13610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBB50_13610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_13620 PF12911 N-terminal TM domain of oligopeptide transport permease C BBB50_13620 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_13630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_13635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_13635 PF00005 ABC transporter BBB50_13675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BBB50_13680 PF13361 UvrD-like helicase C-terminal domain BBB50_13680 PF00580 UvrD/REP helicase N-terminal domain BBB50_13685 PF00440 Bacterial regulatory proteins, tetR family BBB50_13690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_13695 PF00873 AcrB/AcrD/AcrF family BBB50_13700 PF04380 Membrane fusogenic activity BBB50_13705 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BBB50_13705 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BBB50_13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_13710 PF03466 LysR substrate binding domain BBB50_13785 PF12724 Flavodoxin domain BBB50_13790 PF02386 Cation transport protein BBB50_13795 PF09186 Domain of unknown function (DUF1949) BBB50_13795 PF01205 Uncharacterized protein family UPF0029 BBB50_13800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BBB50_13800 PF00378 Enoyl-CoA hydratase/isomerase BBB50_13800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BBB50_13805 PF02803 Thiolase, C-terminal domain BBB50_13805 PF00108 Thiolase, N-terminal domain BBB50_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_13810 PF03466 LysR substrate binding domain BBB50_13815 PF07690 Major Facilitator Superfamily BBB50_13820 PF12804 MobA-like NTP transferase domain BBB50_13820 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_13825 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BBB50_13825 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BBB50_13830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBB50_13830 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBB50_13835 PF00231 ATP synthase BBB50_13840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBB50_13840 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBB50_13840 PF00306 ATP synthase alpha/beta chain, C terminal domain BBB50_13845 PF00213 ATP synthase delta (OSCP) subunit BBB50_13850 PF00430 ATP synthase B/B' CF(0) BBB50_13855 PF00137 ATP synthase subunit C BBB50_13860 PF00119 ATP synthase A chain BBB50_13865 PF03899 ATP synthase I chain BBB50_13870 PF02195 ParB-like nuclease domain BBB50_13870 PF17762 HTH domain found in ParB protein BBB50_13875 PF13614 AAA domain BBB50_13880 PF02527 rRNA small subunit methyltransferase G BBB50_13885 PF01134 Glucose inhibited division protein A BBB50_13885 PF13932 GidA associated domain BBB50_13895 PF00258 Flavodoxin BBB50_13900 PF10396 GTP-binding protein TrmE N-terminus BBB50_13900 PF12631 MnmE helical domain BBB50_13900 PF01926 50S ribosome-binding GTPase BBB50_13905 PF02096 60Kd inner membrane protein BBB50_13905 PF14849 YidC periplasmic domain BBB50_13910 PF01809 Putative membrane protein insertion efficiency factor BBB50_13915 PF00825 Ribonuclease P BBB50_13920 PF00468 Ribosomal protein L34 BBB50_13925 PF00005 ABC transporter BBB50_13930 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_13935 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_13960 PF01709 Transcriptional regulator BBB50_13965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BBB50_13965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BBB50_13970 PF17200 Single Cache domain 2 BBB50_13970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_13970 PF00672 HAMP domain BBB50_13980 PF10928 Protein of unknown function (DUF2810) BBB50_13985 PF00196 Bacterial regulatory proteins, luxR family BBB50_13985 PF17874 MalT-like TPR region BBB50_13990 PF00343 Carbohydrate phosphorylase BBB50_13995 PF02446 4-alpha-glucanotransferase BBB50_14000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBB50_14000 PF00128 Alpha amylase, catalytic domain BBB50_14000 PF02806 Alpha amylase, C-terminal all-beta domain BBB50_14005 PF05638 Type VI secretion system effector, Hcp BBB50_14010 PF04717 Type VI secretion system, phage-baseplate injector BBB50_14010 PF16671 Actin cross-linking domain BBB50_14035 PF01168 Alanine racemase, N-terminal domain BBB50_14035 PF01757 Acyltransferase family BBB50_14035 PF00842 Alanine racemase, C-terminal domain BBB50_14045 PF00939 Sodium:sulfate symporter transmembrane region BBB50_14050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BBB50_14055 PF08329 Chitinase A, N-terminal domain BBB50_14055 PF00704 Glycosyl hydrolases family 18 BBB50_14075 PF00672 HAMP domain BBB50_14075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_14075 PF02743 Cache domain BBB50_14095 PF01569 PAP2 superfamily BBB50_14100 PF00375 Sodium:dicarboxylate symporter family BBB50_14110 PF02630 SCO1/SenC BBB50_14125 PF03616 Sodium/glutamate symporter BBB50_14130 PF12945 Flagellar protein YcgR BBB50_14130 PF07238 PilZ domain BBB50_14145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BBB50_14145 PF00529 HlyD membrane-fusion protein of T1SS BBB50_14150 PF11742 Protein of unknown function (DUF3302) BBB50_14155 PF00990 Diguanylate cyclase, GGDEF domain BBB50_14170 PF01048 Phosphorylase superfamily BBB50_14180 PF08349 Protein of unknown function (DUF1722) BBB50_14185 PF13411 MerR HTH family regulatory protein BBB50_14190 PF03441 FAD binding domain of DNA photolyase BBB50_14190 PF00875 DNA photolyase BBB50_14195 PF01476 LysM domain BBB50_14195 PF17969 L,D-transpeptidase C-terminal domain BBB50_14195 PF03734 L,D-transpeptidase catalytic domain BBB50_14210 PF00270 DEAD/DEAH box helicase BBB50_14210 PF00271 Helicase conserved C-terminal domain BBB50_14215 PF00326 Prolyl oligopeptidase family BBB50_14215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BBB50_14220 PF00593 TonB dependent receptor BBB50_14220 PF07715 TonB-dependent Receptor Plug Domain BBB50_14240 PF12729 Four helix bundle sensory module for signal transduction BBB50_14240 PF00672 HAMP domain BBB50_14240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_14245 PF12849 PBP superfamily domain BBB50_14250 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_14255 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_14260 PF00005 ABC transporter BBB50_14265 PF03707 Bacterial signalling protein N terminal repeat BBB50_14265 PF00563 EAL domain BBB50_14265 PF00990 Diguanylate cyclase, GGDEF domain BBB50_14280 PF01740 STAS domain BBB50_14280 PF00916 Sulfate permease family BBB50_14290 PF01551 Peptidase family M23 BBB50_14290 PF01476 LysM domain BBB50_14290 PF08525 Opacity-associated protein A N-terminal motif BBB50_14295 PF00563 EAL domain BBB50_14295 PF00990 Diguanylate cyclase, GGDEF domain BBB50_14295 PF13188 PAS domain BBB50_14295 PF03707 Bacterial signalling protein N terminal repeat BBB50_14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_14300 PF03466 LysR substrate binding domain BBB50_14305 PF07690 Major Facilitator Superfamily BBB50_14310 PF00376 MerR family regulatory protein BBB50_14310 PF09278 MerR, DNA binding BBB50_14330 PF00375 Sodium:dicarboxylate symporter family BBB50_14340 PF02001 Protein of unknown function DUF134 BBB50_14365 PF02868 Thermolysin metallopeptidase, alpha-helical domain BBB50_14365 PF07504 Fungalysin/Thermolysin Propeptide Motif BBB50_14365 PF01447 Thermolysin metallopeptidase, catalytic domain BBB50_14365 PF01483 Proprotein convertase P-domain BBB50_14375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BBB50_14375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BBB50_14380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BBB50_14380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBB50_14385 PF00581 Rhodanese-like domain BBB50_14390 PF00196 Bacterial regulatory proteins, luxR family BBB50_14390 PF00563 EAL domain BBB50_14395 PF13419 Haloacid dehalogenase-like hydrolase BBB50_14400 PF01740 STAS domain BBB50_14400 PF00916 Sulfate permease family BBB50_14405 PF00849 RNA pseudouridylate synthase BBB50_14465 PF07724 AAA domain (Cdc48 subfamily) BBB50_14465 PF17871 AAA lid domain BBB50_14465 PF10431 C-terminal, D2-small domain, of ClpB protein BBB50_14465 PF00004 ATPase family associated with various cellular activities (AAA) BBB50_14500 PF16671 Actin cross-linking domain BBB50_14500 PF04717 Type VI secretion system, phage-baseplate injector BBB50_14520 PF05025 RbsD / FucU transport protein family BBB50_14525 PF00005 ABC transporter BBB50_14530 PF02653 Branched-chain amino acid transport system / permease component BBB50_14535 PF13407 Periplasmic binding protein domain BBB50_14540 PF00294 pfkB family carbohydrate kinase BBB50_14545 PF00356 Bacterial regulatory proteins, lacI family BBB50_14550 PF04973 Nicotinamide mononucleotide transporter BBB50_14555 PF01048 Phosphorylase superfamily BBB50_14565 PF03009 Glycerophosphoryl diester phosphodiesterase family BBB50_14570 PF07690 Major Facilitator Superfamily BBB50_14585 PF02743 Cache domain BBB50_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_14585 PF00512 His Kinase A (phospho-acceptor) domain BBB50_14590 PF02954 Bacterial regulatory protein, Fis family BBB50_14590 PF00072 Response regulator receiver domain BBB50_14590 PF00158 Sigma-54 interaction domain BBB50_14610 PF01266 FAD dependent oxidoreductase BBB50_14615 PF12561 ToxR activated gene A lipoprotein domain BBB50_14615 PF00041 Fibronectin type III domain BBB50_14620 PF01327 Polypeptide deformylase BBB50_14630 PF03334 Na+/H+ antiporter subunit BBB50_14635 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BBB50_14655 PF13244 Domain of unknown function (DUF4040) BBB50_14655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BBB50_14655 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BBB50_14655 PF00361 Proton-conducting membrane transporter BBB50_14665 PF00582 Universal stress protein family BBB50_14670 PF03222 Tryptophan/tyrosine permease family BBB50_14675 PF01212 Beta-eliminating lyase BBB50_14685 PF12843 Putative quorum-sensing-regulated virulence factor BBB50_14695 PF00563 EAL domain BBB50_14695 PF00990 Diguanylate cyclase, GGDEF domain BBB50_14695 PF08448 PAS fold BBB50_14700 PF00313 'Cold-shock' DNA-binding domain BBB50_14715 PF13519 von Willebrand factor type A domain BBB50_14715 PF07584 Aerotolerance regulator N-terminal BBB50_14730 PF01882 Protein of unknown function DUF58 BBB50_14735 PF17863 AAA lid domain BBB50_14735 PF07726 ATPase family associated with various cellular activities (AAA) BBB50_14740 PF02743 Cache domain BBB50_14740 PF00672 HAMP domain BBB50_14740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_14755 PF01773 Na+ dependent nucleoside transporter N-terminus BBB50_14755 PF07662 Na+ dependent nucleoside transporter C-terminus BBB50_14755 PF07670 Nucleoside recognition BBB50_14760 PF07687 Peptidase dimerisation domain BBB50_14760 PF01546 Peptidase family M20/M25/M40 BBB50_14770 PF00158 Sigma-54 interaction domain BBB50_14770 PF01590 GAF domain BBB50_14775 PF00175 Oxidoreductase NAD-binding domain BBB50_14775 PF00042 Globin BBB50_14775 PF00970 Oxidoreductase FAD-binding domain BBB50_14780 PF00313 'Cold-shock' DNA-binding domain BBB50_14785 PF03889 Alternative ribosome-rescue factor A BBB50_14800 PF00072 Response regulator receiver domain BBB50_14810 PF01256 Carbohydrate kinase BBB50_14810 PF03853 YjeF-related protein N-terminus BBB50_14815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBB50_14815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBB50_14825 PF07885 Ion channel BBB50_14840 PF00478 IMP dehydrogenase / GMP reductase domain BBB50_14845 PF00145 C-5 cytosine-specific DNA methylase BBB50_14865 PF01797 Transposase IS200 like BBB50_14870 PF00270 DEAD/DEAH box helicase BBB50_14870 PF00271 Helicase conserved C-terminal domain BBB50_14875 PF03605 Anaerobic c4-dicarboxylate membrane transporter BBB50_14880 PF02540 NAD synthase BBB50_14885 PF01467 Cytidylyltransferase-like BBB50_14895 PF11849 Domain of unknown function (DUF3369) BBB50_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_14900 PF00512 His Kinase A (phospho-acceptor) domain BBB50_14900 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_14910 PF03553 Na+/H+ antiporter family BBB50_14915 PF07690 Major Facilitator Superfamily BBB50_14930 PF00990 Diguanylate cyclase, GGDEF domain BBB50_14930 PF08448 PAS fold BBB50_14935 PF00657 GDSL-like Lipase/Acylhydrolase BBB50_14940 PF16458 Beta-prism lectin BBB50_14940 PF07968 Leukocidin/Hemolysin toxin family BBB50_14940 PF12563 Hemolytic toxin N terminal BBB50_14945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_14945 PF00672 HAMP domain BBB50_14945 PF12729 Four helix bundle sensory module for signal transduction BBB50_14950 PF00561 alpha/beta hydrolase fold BBB50_14955 PF03280 Proteobacterial lipase chaperone protein BBB50_14960 PF00801 PKD domain BBB50_14960 PF05547 Immune inhibitor A peptidase M6 BBB50_14980 PF01032 FecCD transport family BBB50_14985 PF01032 FecCD transport family BBB50_14990 PF00005 ABC transporter BBB50_14995 PF12833 Helix-turn-helix domain BBB50_15000 PF07715 TonB-dependent Receptor Plug Domain BBB50_15000 PF00593 TonB dependent receptor BBB50_15010 PF00871 Acetokinase family BBB50_15025 PF00672 HAMP domain BBB50_15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_15025 PF00512 His Kinase A (phospho-acceptor) domain BBB50_15030 PF00486 Transcriptional regulatory protein, C terminal BBB50_15030 PF00072 Response regulator receiver domain BBB50_15040 PF01261 Xylose isomerase-like TIM barrel BBB50_15045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBB50_15055 PF00596 Class II Aldolase and Adducin N-terminal domain BBB50_15060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBB50_15065 PF03611 PTS system sugar-specific permease component BBB50_15070 PF08220 DeoR-like helix-turn-helix domain BBB50_15070 PF00455 DeoR C terminal sensor domain BBB50_15080 PF01292 Prokaryotic cytochrome b561 BBB50_15085 PF00128 Alpha amylase, catalytic domain BBB50_15090 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_15110 PF00072 Response regulator receiver domain BBB50_15110 PF00486 Transcriptional regulatory protein, C terminal BBB50_15115 PF14827 Double sensory domain of two-component sensor kinase BBB50_15115 PF00512 His Kinase A (phospho-acceptor) domain BBB50_15115 PF13426 PAS domain BBB50_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_15115 PF00672 HAMP domain BBB50_15155 PF07690 Major Facilitator Superfamily BBB50_15160 PF01797 Transposase IS200 like BBB50_15165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_15165 PF02743 Cache domain BBB50_15165 PF00672 HAMP domain BBB50_15175 PF07943 Penicillin-binding protein 5, C-terminal domain BBB50_15175 PF00768 D-alanyl-D-alanine carboxypeptidase BBB50_15190 PF00194 Eukaryotic-type carbonic anhydrase BBB50_15195 PF02347 Glycine cleavage system P-protein BBB50_15200 PF01597 Glycine cleavage H-protein BBB50_15205 PF00464 Serine hydroxymethyltransferase BBB50_15215 PF08669 Glycine cleavage T-protein C-terminal barrel domain BBB50_15215 PF01571 Aminomethyltransferase folate-binding domain BBB50_15225 PF01609 Transposase DDE domain BBB50_15225 PF05598 Transposase domain (DUF772) BBB50_15250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBB50_15250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBB50_15250 PF03129 Anticodon binding domain BBB50_15250 PF02824 TGS domain BBB50_15255 PF00707 Translation initiation factor IF-3, C-terminal domain BBB50_15255 PF05198 Translation initiation factor IF-3, N-terminal domain BBB50_15260 PF01632 Ribosomal protein L35 BBB50_15265 PF00453 Ribosomal protein L20 BBB50_15270 PF00589 Phage integrase family BBB50_15270 PF13495 Phage integrase, N-terminal SAM-like domain BBB50_15275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_15290 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BBB50_15295 PF01381 Helix-turn-helix BBB50_15340 PF02016 LD-carboxypeptidase N-terminal domain BBB50_15340 PF17676 LD-carboxypeptidase C-terminal domain BBB50_15360 PF04229 GrpB protein BBB50_15365 PF04229 GrpB protein BBB50_15380 PF08212 Lipocalin-like domain BBB50_15390 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ BBB50_15450 PF00583 Acetyltransferase (GNAT) family BBB50_15460 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BBB50_15525 PF00583 Acetyltransferase (GNAT) family BBB50_15550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_15590 PF17676 LD-carboxypeptidase C-terminal domain BBB50_15590 PF02016 LD-carboxypeptidase N-terminal domain BBB50_15625 PF01966 HD domain BBB50_15670 PF02016 LD-carboxypeptidase N-terminal domain BBB50_15670 PF17676 LD-carboxypeptidase C-terminal domain BBB50_15705 PF08212 Lipocalin-like domain BBB50_15725 PF00665 Integrase core domain BBB50_15730 PF01527 Transposase BBB50_15770 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BBB50_15775 PF01381 Helix-turn-helix BBB50_15780 PF02567 Phenazine biosynthesis-like protein BBB50_15810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_15830 PF08212 Lipocalin-like domain BBB50_15905 PF13302 Acetyltransferase (GNAT) domain BBB50_15985 PF17676 LD-carboxypeptidase C-terminal domain BBB50_15985 PF02016 LD-carboxypeptidase N-terminal domain BBB50_16005 PF08212 Lipocalin-like domain BBB50_16010 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BBB50_16030 PF01555 DNA methylase BBB50_16070 PF01965 DJ-1/PfpI family BBB50_16070 PF12833 Helix-turn-helix domain BBB50_16100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_16125 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system BBB50_16130 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BBB50_16145 PF05598 Transposase domain (DUF772) BBB50_16145 PF01609 Transposase DDE domain BBB50_16165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_16175 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BBB50_16270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_16275 PF01527 Transposase BBB50_16280 PF00665 Integrase core domain BBB50_16290 PF03477 ATP cone domain BBB50_16290 PF13597 Anaerobic ribonucleoside-triphosphate reductase BBB50_16300 PF00155 Aminotransferase class I and II BBB50_16305 PF08443 RimK-like ATP-grasp domain BBB50_16305 PF18030 RimK PreATP-grasp domain BBB50_16310 PF02378 Phosphotransferase system, EIIC BBB50_16310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBB50_16315 PF00294 pfkB family carbohydrate kinase BBB50_16320 PF00381 PTS HPr component phosphorylation site BBB50_16320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBB50_16325 PF00356 Bacterial regulatory proteins, lacI family BBB50_16325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBB50_16330 PF12320 Type 5 capsule protein repressor C-terminal domain BBB50_16330 PF00149 Calcineurin-like phosphoesterase BBB50_16335 PF13476 AAA domain BBB50_16340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_16340 PF00072 Response regulator receiver domain BBB50_16345 PF00155 Aminotransferase class I and II BBB50_16355 PF00654 Voltage gated chloride channel BBB50_16360 PF02492 CobW/HypB/UreG, nucleotide-binding domain BBB50_16360 PF07683 Cobalamin synthesis protein cobW C-terminal domain BBB50_16365 PF01926 50S ribosome-binding GTPase BBB50_16370 PF02705 K+ potassium transporter BBB50_16375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BBB50_16375 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BBB50_16375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBB50_16375 PF10371 Domain of unknown function BBB50_16375 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BBB50_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_16380 PF00512 His Kinase A (phospho-acceptor) domain BBB50_16380 PF02702 Osmosensitive K+ channel His kinase sensor domain BBB50_16380 PF13493 Domain of unknown function (DUF4118) BBB50_16385 PF00486 Transcriptional regulatory protein, C terminal BBB50_16385 PF00072 Response regulator receiver domain BBB50_16390 PF02416 mttA/Hcf106 family BBB50_16395 PF09335 SNARE associated Golgi protein BBB50_16405 PF00563 EAL domain BBB50_16405 PF10388 EAL-domain associated signalling protein domain BBB50_16415 PF01292 Prokaryotic cytochrome b561 BBB50_16420 PF04264 YceI-like domain BBB50_16425 PF01226 Formate/nitrite transporter BBB50_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_16430 PF03466 LysR substrate binding domain BBB50_16435 PF06496 Protein of unknown function (DUF1097) BBB50_16440 PF11398 Protein of unknown function (DUF2813) BBB50_16445 PF02872 5'-nucleotidase, C-terminal domain BBB50_16445 PF00149 Calcineurin-like phosphoesterase BBB50_16450 PF03741 Integral membrane protein TerC family BBB50_16460 PF08274 PhnA Zinc-Ribbon BBB50_16460 PF03831 PhnA domain BBB50_16495 PF00990 Diguanylate cyclase, GGDEF domain BBB50_16495 PF17151 Periplasmic sensor domain BBB50_16515 PF17158 Membrane-associated sensor, integral membrane domain BBB50_16515 PF00990 Diguanylate cyclase, GGDEF domain BBB50_16530 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BBB50_16530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BBB50_16530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BBB50_16535 PF02233 NAD(P) transhydrogenase beta subunit BBB50_16545 PF00072 Response regulator receiver domain BBB50_16545 PF00486 Transcriptional regulatory protein, C terminal BBB50_16560 PF03701 Uncharacterised protein family (UPF0181) BBB50_16565 PF01253 Translation initiation factor SUI1 BBB50_16575 PF01820 D-ala D-ala ligase N-terminus BBB50_16575 PF07478 D-ala D-ala ligase C-terminus BBB50_16585 PF13380 CoA binding domain BBB50_16585 PF13607 Succinyl-CoA ligase like flavodoxin domain BBB50_16585 PF00583 Acetyltransferase (GNAT) family BBB50_16590 PF03466 LysR substrate binding domain BBB50_16590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_16595 PF00593 TonB dependent receptor BBB50_16595 PF07715 TonB-dependent Receptor Plug Domain BBB50_16600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_16600 PF12793 Sugar transport-related sRNA regulator N-term BBB50_16610 PF03061 Thioesterase superfamily BBB50_16630 PF00043 Glutathione S-transferase, C-terminal domain BBB50_16630 PF02798 Glutathione S-transferase, N-terminal domain BBB50_16645 PF12804 MobA-like NTP transferase domain BBB50_16645 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_16645 PF03479 Plants and Prokaryotes Conserved (PCC) domain BBB50_16650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_16650 PF00005 ABC transporter BBB50_16655 PF12911 N-terminal TM domain of oligopeptide transport permease C BBB50_16655 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_16660 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_16665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBB50_16690 PF00854 POT family BBB50_16700 PF00392 Bacterial regulatory proteins, gntR family BBB50_16700 PF07702 UTRA domain BBB50_16705 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_16710 PF00005 ABC transporter BBB50_16720 PF00266 Aminotransferase class-V BBB50_16730 PF13419 Haloacid dehalogenase-like hydrolase BBB50_16735 PF01272 Transcription elongation factor, GreA/GreB, C-term BBB50_16735 PF14760 Rnk N-terminus BBB50_16740 PF13419 Haloacid dehalogenase-like hydrolase BBB50_16755 PF01741 Large-conductance mechanosensitive channel, MscL BBB50_16760 PF01268 Formate--tetrahydrofolate ligase BBB50_16765 PF01625 Peptide methionine sulfoxide reductase BBB50_16765 PF01641 SelR domain BBB50_16770 PF01227 GTP cyclohydrolase I BBB50_16775 PF03454 MoeA C-terminal region (domain IV) BBB50_16775 PF00994 Probable molybdopterin binding domain BBB50_16775 PF03453 MoeA N-terminal region (domain I and II) BBB50_16780 PF00899 ThiF family BBB50_16790 PF00581 Rhodanese-like domain BBB50_16795 PF04198 Putative sugar-binding domain BBB50_16805 PF00923 Transaldolase/Fructose-6-phosphate aldolase BBB50_16810 PF02780 Transketolase, C-terminal domain BBB50_16810 PF00456 Transketolase, thiamine diphosphate binding domain BBB50_16810 PF02779 Transketolase, pyrimidine binding domain BBB50_16835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBB50_16835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBB50_16850 PF06942 GlpM protein BBB50_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_16860 PF03466 LysR substrate binding domain BBB50_16865 PF03992 Antibiotic biosynthesis monooxygenase BBB50_16870 PF00881 Nitroreductase family BBB50_16875 PF00873 AcrB/AcrD/AcrF family BBB50_16890 PF04143 Sulphur transport BBB50_16905 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBB50_16905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBB50_16950 PF00367 phosphotransferase system, EIIB BBB50_16950 PF02378 Phosphotransferase system, EIIC BBB50_16960 PF00251 Glycosyl hydrolases family 32 N-terminal domain BBB50_16960 PF08244 Glycosyl hydrolases family 32 C terminal BBB50_16965 PF00294 pfkB family carbohydrate kinase BBB50_16970 PF01266 FAD dependent oxidoreductase BBB50_16970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BBB50_16975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_16975 PF00672 HAMP domain BBB50_16980 PF13488 Glycine zipper BBB50_16980 PF00691 OmpA family BBB50_16985 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BBB50_16985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBB50_16990 PF13419 Haloacid dehalogenase-like hydrolase BBB50_16995 PF00672 HAMP domain BBB50_16995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_16995 PF12729 Four helix bundle sensory module for signal transduction BBB50_17005 PF03606 C4-dicarboxylate anaerobic carrier BBB50_17010 PF03315 Serine dehydratase beta chain BBB50_17010 PF03313 Serine dehydratase alpha chain BBB50_17015 PF00474 Sodium:solute symporter family BBB50_17035 PF00356 Bacterial regulatory proteins, lacI family BBB50_17040 PF00196 Bacterial regulatory proteins, luxR family BBB50_17040 PF00072 Response regulator receiver domain BBB50_17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17045 PF07730 Histidine kinase BBB50_17045 PF00672 HAMP domain BBB50_17045 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BBB50_17050 PF13187 4Fe-4S dicluster domain BBB50_17050 PF12838 4Fe-4S dicluster domain BBB50_17060 PF00384 Molybdopterin oxidoreductase BBB50_17060 PF01568 Molydopterin dinucleotide binding domain BBB50_17060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BBB50_17065 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BBB50_17070 PF03264 NapC/NirT cytochrome c family, N-terminal region BBB50_17080 PF01966 HD domain BBB50_17085 PF00196 Bacterial regulatory proteins, luxR family BBB50_17085 PF00072 Response regulator receiver domain BBB50_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17090 PF07730 Histidine kinase BBB50_17090 PF05231 MASE1 BBB50_17095 PF07690 Major Facilitator Superfamily BBB50_17105 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_17110 PF08402 TOBE domain BBB50_17110 PF00005 ABC transporter BBB50_17115 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BBB50_17125 PF02803 Thiolase, C-terminal domain BBB50_17125 PF00108 Thiolase, N-terminal domain BBB50_17130 PF00106 short chain dehydrogenase BBB50_17135 PF02355 Protein export membrane protein BBB50_17135 PF07549 SecD/SecF GG Motif BBB50_17140 PF07549 SecD/SecF GG Motif BBB50_17140 PF02355 Protein export membrane protein BBB50_17140 PF13721 SecD export protein N-terminal TM region BBB50_17155 PF17158 Membrane-associated sensor, integral membrane domain BBB50_17155 PF00990 Diguanylate cyclase, GGDEF domain BBB50_17160 PF00483 Nucleotidyl transferase BBB50_17165 PF06483 Chitinase C BBB50_17165 PF00704 Glycosyl hydrolases family 18 BBB50_17170 PF00465 Iron-containing alcohol dehydrogenase BBB50_17180 PF14532 Sigma-54 interaction domain BBB50_17180 PF00072 Response regulator receiver domain BBB50_17180 PF02954 Bacterial regulatory protein, Fis family BBB50_17185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17185 PF02743 Cache domain BBB50_17185 PF00512 His Kinase A (phospho-acceptor) domain BBB50_17195 PF07690 Major Facilitator Superfamily BBB50_17200 PF02887 Pyruvate kinase, alpha/beta domain BBB50_17200 PF00224 Pyruvate kinase, barrel domain BBB50_17205 PF00072 Response regulator receiver domain BBB50_17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17205 PF01627 Hpt domain BBB50_17205 PF00512 His Kinase A (phospho-acceptor) domain BBB50_17205 PF00672 HAMP domain BBB50_17210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBB50_17215 PF02142 MGS-like domain BBB50_17220 PF00857 Isochorismatase family BBB50_17225 PF01219 Prokaryotic diacylglycerol kinase BBB50_17240 PF12462 DNA helicase IV / RNA helicase N terminal BBB50_17240 PF00580 UvrD/REP helicase N-terminal domain BBB50_17240 PF13361 UvrD-like helicase C-terminal domain BBB50_17245 PF12805 FUSC-like inner membrane protein yccS BBB50_17250 PF08448 PAS fold BBB50_17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17250 PF00512 His Kinase A (phospho-acceptor) domain BBB50_17250 PF00072 Response regulator receiver domain BBB50_17250 PF13188 PAS domain BBB50_17275 PF00005 ABC transporter BBB50_17275 PF03459 TOBE domain BBB50_17280 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_17290 PF07685 CobB/CobQ-like glutamine amidotransferase domain BBB50_17290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BBB50_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17335 PF00072 Response regulator receiver domain BBB50_17335 PF09308 LuxQ, periplasmic BBB50_17335 PF00512 His Kinase A (phospho-acceptor) domain BBB50_17340 PF13407 Periplasmic binding protein domain BBB50_17350 PF01541 GIY-YIG catalytic domain BBB50_17355 PF04337 Protein of unknown function, DUF480 BBB50_17365 PF04363 Protein of unknown function (DUF496) BBB50_17380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BBB50_17380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BBB50_17385 PF00230 Major intrinsic protein BBB50_17395 PF01266 FAD dependent oxidoreductase BBB50_17395 PF04324 BFD-like [2Fe-2S] binding domain BBB50_17400 PF00890 FAD binding domain BBB50_17405 PF13183 4Fe-4S dicluster domain BBB50_17405 PF02754 Cysteine-rich domain BBB50_17410 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BBB50_17410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BBB50_17415 PF00085 Thioredoxin BBB50_17420 PF07690 Major Facilitator Superfamily BBB50_17445 PF03466 LysR substrate binding domain BBB50_17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_17450 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_17455 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_17460 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_17465 PF00005 ABC transporter BBB50_17475 PF05762 VWA domain containing CoxE-like protein BBB50_17480 PF07728 AAA domain (dynein-related subfamily) BBB50_17480 PF17868 AAA lid domain BBB50_17480 PF12592 Protein of unknown function (DUF3763) BBB50_17485 PF00293 NUDIX domain BBB50_17490 PF01212 Beta-eliminating lyase BBB50_17495 PF00034 Cytochrome c BBB50_17500 PF08361 MAATS-type transcriptional repressor, C-terminal region BBB50_17500 PF00440 Bacterial regulatory proteins, tetR family BBB50_17505 PF00270 DEAD/DEAH box helicase BBB50_17505 PF00271 Helicase conserved C-terminal domain BBB50_17510 PF04336 Acyl carrier protein phosphodiesterase BBB50_17520 PF03222 Tryptophan/tyrosine permease family BBB50_17545 PF07728 AAA domain (dynein-related subfamily) BBB50_17545 PF17868 AAA lid domain BBB50_17545 PF12592 Protein of unknown function (DUF3763) BBB50_17555 PF01212 Beta-eliminating lyase BBB50_17560 PF00034 Cytochrome c BBB50_17565 PF08361 MAATS-type transcriptional repressor, C-terminal region BBB50_17565 PF00440 Bacterial regulatory proteins, tetR family BBB50_17570 PF00270 DEAD/DEAH box helicase BBB50_17570 PF00271 Helicase conserved C-terminal domain BBB50_17575 PF04336 Acyl carrier protein phosphodiesterase BBB50_17585 PF03222 Tryptophan/tyrosine permease family BBB50_17590 PF12729 Four helix bundle sensory module for signal transduction BBB50_17590 PF00672 HAMP domain BBB50_17590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_17595 PF16363 GDP-mannose 4,6 dehydratase BBB50_17605 PF03746 LamB/YcsF family BBB50_17615 PF02626 Carboxyltransferase domain, subdomain A and B BBB50_17625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BBB50_17625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BBB50_17635 PF00005 ABC transporter BBB50_17640 PF13472 GDSL-like Lipase/Acylhydrolase family BBB50_17645 PF07055 Enoyl reductase FAD binding domain BBB50_17645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BBB50_17645 PF12241 Trans-2-enoyl-CoA reductase catalytic region BBB50_17650 PF00990 Diguanylate cyclase, GGDEF domain BBB50_17650 PF00498 FHA domain BBB50_17650 PF00563 EAL domain BBB50_17665 PF01556 DnaJ C terminal domain BBB50_17665 PF00226 DnaJ domain BBB50_17665 PF00684 DnaJ central domain BBB50_17680 PF00665 Integrase core domain BBB50_17685 PF01527 Transposase BBB50_17700 PF02796 Helix-turn-helix domain of resolvase BBB50_17700 PF00239 Resolvase, N terminal domain BBB50_17710 PF13419 Haloacid dehalogenase-like hydrolase BBB50_17725 PF00294 pfkB family carbohydrate kinase BBB50_17730 PF00884 Sulfatase BBB50_17740 PF03880 DbpA RNA binding domain BBB50_17740 PF00270 DEAD/DEAH box helicase BBB50_17740 PF00271 Helicase conserved C-terminal domain BBB50_17745 PF08206 Ribonuclease B OB domain BBB50_17745 PF00575 S1 RNA binding domain BBB50_17745 PF00773 RNB domain BBB50_17755 PF12849 PBP superfamily domain BBB50_17760 PF01575 MaoC like domain BBB50_17765 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BBB50_17770 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BBB50_17770 PF18416 N-acetylglucosamine binding protein domain 2 BBB50_17775 PF02868 Thermolysin metallopeptidase, alpha-helical domain BBB50_17775 PF04151 Bacterial pre-peptidase C-terminal domain BBB50_17775 PF07504 Fungalysin/Thermolysin Propeptide Motif BBB50_17775 PF03413 Peptidase propeptide and YPEB domain BBB50_17775 PF01447 Thermolysin metallopeptidase, catalytic domain BBB50_17780 PF04389 Peptidase family M28 BBB50_17780 PF04151 Bacterial pre-peptidase C-terminal domain BBB50_17785 PF00491 Arginase family BBB50_17790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BBB50_17790 PF17944 Arginine decarboxylase C-terminal helical extension BBB50_17790 PF17810 Arginine decarboxylase helical bundle domain BBB50_17800 PF03448 MgtE intracellular N domain BBB50_17800 PF00571 CBS domain BBB50_17800 PF01769 Divalent cation transporter BBB50_17805 PF00166 Chaperonin 10 Kd subunit BBB50_17810 PF00118 TCP-1/cpn60 chaperonin family BBB50_17820 PF00696 Amino acid kinase family BBB50_17820 PF13840 ACT domain BBB50_17825 PF06339 Ectoine synthase BBB50_17830 PF00202 Aminotransferase class-III BBB50_17835 PF00583 Acetyltransferase (GNAT) family BBB50_17840 PF01329 Pterin 4 alpha carbinolamine dehydratase BBB50_17845 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BBB50_17850 PF13193 AMP-binding enzyme C-terminal domain BBB50_17850 PF00501 AMP-binding enzyme BBB50_17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_17870 PF03466 LysR substrate binding domain BBB50_17880 PF00892 EamA-like transporter family BBB50_17885 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BBB50_17885 PF00132 Bacterial transferase hexapeptide (six repeats) BBB50_17885 PF14602 Hexapeptide repeat of succinyl-transferase BBB50_17890 PF01595 Cyclin M transmembrane N-terminal domain BBB50_17890 PF03471 Transporter associated domain BBB50_17890 PF00571 CBS domain BBB50_17895 PF02566 OsmC-like protein BBB50_17900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BBB50_17910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBB50_17910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBB50_17930 PF00990 Diguanylate cyclase, GGDEF domain BBB50_17940 PF04397 LytTr DNA-binding domain BBB50_17940 PF00072 Response regulator receiver domain BBB50_17945 PF07694 5TMR of 5TMR-LYT BBB50_17945 PF13492 GAF domain BBB50_17945 PF06580 Histidine kinase BBB50_17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_17960 PF02687 FtsX-like permease family BBB50_17960 PF12704 MacB-like periplasmic core domain BBB50_17960 PF00005 ABC transporter BBB50_17965 PF00005 ABC transporter BBB50_17980 PF00248 Aldo/keto reductase family BBB50_17985 PF00128 Alpha amylase, catalytic domain BBB50_18000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BBB50_18005 PF12262 Bacterial virulence factor lipase N-terminal BBB50_18010 PF08447 PAS fold BBB50_18010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18010 PF13426 PAS domain BBB50_18015 PF07504 Fungalysin/Thermolysin Propeptide Motif BBB50_18015 PF03413 Peptidase propeptide and YPEB domain BBB50_18015 PF01447 Thermolysin metallopeptidase, catalytic domain BBB50_18015 PF04151 Bacterial pre-peptidase C-terminal domain BBB50_18015 PF02868 Thermolysin metallopeptidase, alpha-helical domain BBB50_18035 PF00768 D-alanyl-D-alanine carboxypeptidase BBB50_18040 PF00392 Bacterial regulatory proteins, gntR family BBB50_18040 PF00155 Aminotransferase class I and II BBB50_18045 PF01654 Cytochrome bd terminal oxidase subunit I BBB50_18050 PF02322 Cytochrome bd terminal oxidase subunit II BBB50_18060 PF00291 Pyridoxal-phosphate dependent enzyme BBB50_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18065 PF03466 LysR substrate binding domain BBB50_18110 PF08240 Alcohol dehydrogenase GroES-like domain BBB50_18110 PF00107 Zinc-binding dehydrogenase BBB50_18115 PF00155 Aminotransferase class I and II BBB50_18120 PF01053 Cys/Met metabolism PLP-dependent enzyme BBB50_18125 PF03466 LysR substrate binding domain BBB50_18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BBB50_18155 PF01966 HD domain BBB50_18160 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BBB50_18160 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BBB50_18165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BBB50_18170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BBB50_18170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BBB50_18195 PF02595 Glycerate kinase family BBB50_18200 PF02447 GntP family permease BBB50_18205 PF13556 PucR C-terminal helix-turn-helix domain BBB50_18205 PF05651 Putative sugar diacid recognition BBB50_18205 PF17853 GGDEF-like domain BBB50_18210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18210 PF00672 HAMP domain BBB50_18215 PF01243 Pyridoxamine 5'-phosphate oxidase BBB50_18220 PF06228 Haem utilisation ChuX/HutX BBB50_18225 PF04055 Radical SAM superfamily BBB50_18230 PF03544 Gram-negative bacterial TonB protein C-terminal BBB50_18235 PF01618 MotA/TolQ/ExbB proton channel family BBB50_18240 PF02472 Biopolymer transport protein ExbD/TolR BBB50_18245 PF01497 Periplasmic binding protein BBB50_18250 PF01032 FecCD transport family BBB50_18255 PF00005 ABC transporter BBB50_18285 PF02743 Cache domain BBB50_18285 PF00672 HAMP domain BBB50_18285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18290 PF00111 2Fe-2S iron-sulfur cluster binding domain BBB50_18290 PF03473 MOSC domain BBB50_18290 PF03476 MOSC N-terminal beta barrel domain BBB50_18290 PF00111 2Fe-2S iron-sulfur cluster binding domain BBB50_18290 PF03473 MOSC domain BBB50_18290 PF03476 MOSC N-terminal beta barrel domain BBB50_18295 PF01979 Amidohydrolase family BBB50_18305 PF05656 Protein of unknown function (DUF805) BBB50_18315 PF05958 tRNA (Uracil-5-)-methyltransferase BBB50_18320 PF05661 Protein of unknown function (DUF808) BBB50_18330 PF00313 'Cold-shock' DNA-binding domain BBB50_18345 PF12833 Helix-turn-helix domain BBB50_18345 PF00072 Response regulator receiver domain BBB50_18355 PF00990 Diguanylate cyclase, GGDEF domain BBB50_18355 PF08448 PAS fold BBB50_18360 PF08220 DeoR-like helix-turn-helix domain BBB50_18360 PF00455 DeoR C terminal sensor domain BBB50_18375 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_18380 PF14785 Maltose transport system permease protein MalF P2 domain BBB50_18380 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_18385 PF01547 Bacterial extracellular solute-binding protein BBB50_18390 PF00005 ABC transporter BBB50_18390 PF08402 TOBE domain BBB50_18395 PF13302 Acetyltransferase (GNAT) domain BBB50_18410 PF01906 Putative heavy-metal-binding BBB50_18415 PF00196 Bacterial regulatory proteins, luxR family BBB50_18425 PF01584 CheW-like domain BBB50_18425 PF00072 Response regulator receiver domain BBB50_18430 PF01047 MarR family BBB50_18435 PF00990 Diguanylate cyclase, GGDEF domain BBB50_18455 PF00563 EAL domain BBB50_18455 PF00990 Diguanylate cyclase, GGDEF domain BBB50_18455 PF03707 Bacterial signalling protein N terminal repeat BBB50_18475 PF03466 LysR substrate binding domain BBB50_18475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18480 PF00990 Diguanylate cyclase, GGDEF domain BBB50_18480 PF00563 EAL domain BBB50_18490 PF02678 Pirin BBB50_18490 PF05726 Pirin C-terminal cupin domain BBB50_18495 PF06865 Pyrimidine/purine nucleoside phosphorylase BBB50_18505 PF07690 Major Facilitator Superfamily BBB50_18515 PF00672 HAMP domain BBB50_18515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18515 PF17200 Single Cache domain 2 BBB50_18520 PF13654 AAA domain BBB50_18520 PF05362 Lon protease (S16) C-terminal proteolytic domain BBB50_18530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_18530 PF00005 ABC transporter BBB50_18535 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_18540 PF00672 HAMP domain BBB50_18540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18540 PF17200 Single Cache domain 2 BBB50_18550 PF03466 LysR substrate binding domain BBB50_18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18555 PF02652 L-lactate permease BBB50_18560 PF01070 FMN-dependent dehydrogenase BBB50_18570 PF03618 Kinase/pyrophosphorylase BBB50_18575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BBB50_18575 PF02896 PEP-utilising enzyme, TIM barrel domain BBB50_18575 PF00391 PEP-utilising enzyme, mobile domain BBB50_18580 PF08447 PAS fold BBB50_18580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18585 PF01554 MatE BBB50_18590 PF00271 Helicase conserved C-terminal domain BBB50_18590 PF00270 DEAD/DEAH box helicase BBB50_18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18595 PF03466 LysR substrate binding domain BBB50_18605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBB50_18615 PF00664 ABC transporter transmembrane region BBB50_18615 PF00005 ABC transporter BBB50_18625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBB50_18635 PF01810 LysE type translocator BBB50_18640 PF12833 Helix-turn-helix domain BBB50_18655 PF01557 Fumarylacetoacetate (FAA) hydrolase family BBB50_18660 PF01047 MarR family BBB50_18665 PF02566 OsmC-like protein BBB50_18670 PF13609 Gram-negative porin BBB50_18675 PF00892 EamA-like transporter family BBB50_18680 PF00462 Glutaredoxin BBB50_18685 PF07670 Nucleoside recognition BBB50_18690 PF07670 Nucleoside recognition BBB50_18695 PF03600 Citrate transporter BBB50_18705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BBB50_18705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BBB50_18710 PF00730 HhH-GPD superfamily base excision DNA repair protein BBB50_18710 PF06029 AlkA N-terminal domain BBB50_18715 PF07681 DoxX BBB50_18720 PF03466 LysR substrate binding domain BBB50_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BBB50_18750 PF07148 Maltose operon periplasmic protein precursor (MalM) BBB50_18755 PF02264 LamB porin BBB50_18760 PF00128 Alpha amylase, catalytic domain BBB50_18760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBB50_18770 PF12729 Four helix bundle sensory module for signal transduction BBB50_18770 PF00672 HAMP domain BBB50_18770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18785 PF00672 HAMP domain BBB50_18795 PF00793 DAHP synthetase I family BBB50_18800 PF00005 ABC transporter BBB50_18805 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_18810 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBB50_18815 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_18820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBB50_18820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBB50_18820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBB50_18820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBB50_18830 PF01551 Peptidase family M23 BBB50_18830 PF04225 Opacity-associated protein A LysM-like domain BBB50_18840 PF02378 Phosphotransferase system, EIIC BBB50_18840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BBB50_18840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BBB50_18845 PF08125 Mannitol dehydrogenase C-terminal domain BBB50_18845 PF01232 Mannitol dehydrogenase Rossmann domain BBB50_18850 PF05068 Mannitol repressor BBB50_18855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBB50_18885 PF13460 NAD(P)H-binding BBB50_18890 PF03466 LysR substrate binding domain BBB50_18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18895 PF02743 Cache domain BBB50_18895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18895 PF00672 HAMP domain BBB50_18900 PF00106 short chain dehydrogenase BBB50_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBB50_18905 PF03466 LysR substrate binding domain BBB50_18910 PF04013 Putative SAM-dependent RNA methyltransferase BBB50_18915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BBB50_18920 PF13520 Amino acid permease BBB50_18925 PF01276 Orn/Lys/Arg decarboxylase, major domain BBB50_18925 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BBB50_18925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BBB50_18935 PF00171 Aldehyde dehydrogenase family BBB50_18940 PF01037 Lrp/AsnC ligand binding domain BBB50_18945 PF02743 Cache domain BBB50_18945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_18945 PF00672 HAMP domain BBB50_18955 PF00474 Sodium:solute symporter family BBB50_18965 PF01619 Proline dehydrogenase BBB50_18965 PF00171 Aldehyde dehydrogenase family BBB50_18965 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BBB50_18965 PF14850 DNA-binding domain of Proline dehydrogenase BBB50_18970 PF12833 Helix-turn-helix domain BBB50_18980 PF03781 Sulfatase-modifying factor enzyme 1 BBB50_18985 PF00072 Response regulator receiver domain BBB50_18985 PF00196 Bacterial regulatory proteins, luxR family BBB50_18990 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BBB50_18990 PF01243 Pyridoxamine 5'-phosphate oxidase BBB50_18995 PF00529 HlyD membrane-fusion protein of T1SS BBB50_19010 PF00005 ABC transporter BBB50_19010 PF00664 ABC transporter transmembrane region BBB50_19010 PF03412 Peptidase C39 family BBB50_19020 PF00072 Response regulator receiver domain BBB50_19020 PF00486 Transcriptional regulatory protein, C terminal BBB50_19030 PF02743 Cache domain BBB50_19030 PF00672 HAMP domain BBB50_19030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_19035 PF00072 Response regulator receiver domain BBB50_19035 PF01339 CheB methylesterase BBB50_19040 PF03975 CheD chemotactic sensory transduction BBB50_19045 PF01739 CheR methyltransferase, SAM binding domain BBB50_19045 PF03705 CheR methyltransferase, all-alpha domain BBB50_19050 PF00672 HAMP domain BBB50_19050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBB50_19050 PF02203 Tar ligand binding domain homologue BBB50_19055 PF01584 CheW-like domain BBB50_19060 PF01584 CheW-like domain BBB50_19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_19065 PF02895 Signal transducing histidine kinase, homodimeric domain BBB50_19065 PF01627 Hpt domain BBB50_19065 PF09078 CheY binding BBB50_19065 PF01584 CheW-like domain BBB50_19070 PF00072 Response regulator receiver domain BBB50_19085 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_19090 PF12911 N-terminal TM domain of oligopeptide transport permease C BBB50_19090 PF00528 Binding-protein-dependent transport system inner membrane component BBB50_19095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBB50_19095 PF00005 ABC transporter BBB50_19100 PF00884 Sulfatase BBB50_19100 PF08019 Phosphoethanolamine transferase EptA/EptB BBB50_19105 PF08521 Two-component sensor kinase N-terminal BBB50_19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBB50_19105 PF00512 His Kinase A (phospho-acceptor) domain BBB50_19110 PF00486 Transcriptional regulatory protein, C terminal BBB50_19110 PF00072 Response regulator receiver domain BBB50_19120 PF00106 short chain dehydrogenase BBB50_19130 PF00501 AMP-binding enzyme BBB50_19140 PF13718 GNAT acetyltransferase 2 BBB50_19140 PF05127 Helicase BBB50_19145 PF13416 Bacterial extracellular solute-binding protein BBB50_19150 PF08775 ParB family BBB50_19150 PF02195 ParB-like nuclease domain BBB50_19155 PF13614 AAA domain BBB50_19155 PF18607 ParA helix turn helix domain