locus-tag class description C1H56_00005 PF11638 DnaA N-terminal domain C1H56_00005 PF08299 Bacterial dnaA protein helix-turn-helix C1H56_00005 PF00308 Bacterial dnaA protein C1H56_00010 PF02767 DNA polymerase III beta subunit, central domain C1H56_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C1H56_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C1H56_00015 PF02463 RecF/RecN/SMC N terminal domain C1H56_00020 PF01751 Toprim domain C1H56_00020 PF18053 DNA gyrase B subunit insert domain C1H56_00020 PF00986 DNA gyrase B subunit, carboxyl terminus C1H56_00020 PF00204 DNA gyrase B C1H56_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_00035 PF00011 Hsp20/alpha crystallin family C1H56_00040 PF00155 Aminotransferase class I and II C1H56_00050 PF02092 Glycyl-tRNA synthetase beta subunit C1H56_00050 PF05746 DALR anticodon binding domain C1H56_00055 PF02091 Glycyl-tRNA synthetase alpha subunit C1H56_00060 PF01169 Uncharacterized protein family UPF0016 C1H56_00075 PF01206 Sulfurtransferase TusA C1H56_00085 PF00107 Zinc-binding dehydrogenase C1H56_00085 PF08240 Alcohol dehydrogenase GroES-like domain C1H56_00090 PF00585 C-terminal regulatory domain of Threonine dehydratase C1H56_00090 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_00095 PF00920 Dehydratase family C1H56_00100 PF01063 Amino-transferase class IV C1H56_00110 PF00205 Thiamine pyrophosphate enzyme, central domain C1H56_00110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1H56_00110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1H56_00115 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1H56_00115 PF01078 Magnesium chelatase, subunit ChlI C1H56_00120 PF01553 Acyltransferase C1H56_00125 PF01323 DSBA-like thioredoxin domain C1H56_00130 PF01636 Phosphotransferase enzyme family C1H56_00135 PF12801 4Fe-4S binding domain C1H56_00135 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C1H56_00135 PF13746 4Fe-4S dicluster domain C1H56_00145 PF06288 Protein of unknown function (DUF1040) C1H56_00155 PF07070 SpoOM protein C1H56_00160 PF03006 Haemolysin-III related C1H56_00170 PF02386 Cation transport protein C1H56_00175 PF02254 TrkA-N domain C1H56_00175 PF02080 TrkA-C domain C1H56_00180 PF01029 NusB family C1H56_00180 PF01189 16S rRNA methyltransferase RsmB/F C1H56_00185 PF02911 Formyl transferase, C-terminal domain C1H56_00185 PF00551 Formyl transferase C1H56_00190 PF01327 Polypeptide deformylase C1H56_00195 PF01476 LysM domain C1H56_00200 PF02481 DNA recombination-mediator protein A C1H56_00200 PF17782 DprA winged helix domain C1H56_00205 PF04361 Protein of unknown function (DUF494) C1H56_00210 PF01396 Topoisomerase DNA binding C4 zinc finger C1H56_00215 PF02222 ATP-grasp domain C1H56_00215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C1H56_00220 PF00731 AIR carboxylase C1H56_00225 PF01300 Telomere recombination C1H56_00230 PF01218 Coproporphyrinogen III oxidase C1H56_00235 PF01488 Shikimate / quinate 5-dehydrogenase C1H56_00235 PF08501 Shikimate dehydrogenase substrate binding domain C1H56_00235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1H56_00245 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_00280 PF13091 PLD-like domain C1H56_00290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C1H56_00290 PF01565 FAD binding domain C1H56_00295 PF02237 Biotin protein ligase C terminal domain C1H56_00295 PF03099 Biotin/lipoate A/B protein ligase family C1H56_00295 PF08279 HTH domain C1H56_00300 PF00485 Phosphoribulokinase / Uridine kinase family C1H56_00325 PF00009 Elongation factor Tu GTP binding domain C1H56_00325 PF03143 Elongation factor Tu C-terminal domain C1H56_00325 PF03144 Elongation factor Tu domain 2 C1H56_00330 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C1H56_00335 PF02357 Transcription termination factor nusG C1H56_00335 PF00467 KOW motif C1H56_00340 PF00298 Ribosomal protein L11, RNA binding domain C1H56_00340 PF03946 Ribosomal protein L11, N-terminal domain C1H56_00345 PF00687 Ribosomal protein L1p/L10e family C1H56_00350 PF00466 Ribosomal protein L10 C1H56_00355 PF16320 Ribosomal protein L7/L12 dimerisation domain C1H56_00355 PF00542 Ribosomal protein L7/L12 C-terminal domain C1H56_00360 PF04560 RNA polymerase Rpb2, domain 7 C1H56_00360 PF04561 RNA polymerase Rpb2, domain 2 C1H56_00360 PF00562 RNA polymerase Rpb2, domain 6 C1H56_00360 PF10385 RNA polymerase beta subunit external 1 domain C1H56_00360 PF04565 RNA polymerase Rpb2, domain 3 C1H56_00360 PF04563 RNA polymerase beta subunit C1H56_00365 PF04997 RNA polymerase Rpb1, domain 1 C1H56_00365 PF04983 RNA polymerase Rpb1, domain 3 C1H56_00365 PF05000 RNA polymerase Rpb1, domain 4 C1H56_00365 PF00623 RNA polymerase Rpb1, domain 2 C1H56_00365 PF04998 RNA polymerase Rpb1, domain 5 C1H56_00370 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C1H56_00375 PF00293 NUDIX domain C1H56_00375 PF09297 NADH pyrophosphatase zinc ribbon domain C1H56_00380 PF01208 Uroporphyrinogen decarboxylase (URO-D) C1H56_00385 PF08360 QacR-like protein, C-terminal region C1H56_00385 PF00440 Bacterial regulatory proteins, tetR family C1H56_00395 PF01551 Peptidase family M23 C1H56_00400 PF01676 Metalloenzyme superfamily C1H56_00400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1H56_00410 PF02080 TrkA-C domain C1H56_00410 PF03600 Citrate transporter C1H56_00415 PF02666 Phosphatidylserine decarboxylase C1H56_00420 PF03193 RsgA GTPase C1H56_00425 PF00929 Exonuclease C1H56_00480 PF08331 Domain of unknown function (DUF1730) C1H56_00485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1H56_00490 PF01520 N-acetylmuramoyl-L-alanine amidase C1H56_00495 PF01119 DNA mismatch repair protein, C-terminal domain C1H56_00495 PF08676 MutL C terminal dimerisation domain C1H56_00505 PF17209 Hfq protein C1H56_00510 PF16360 GTP-binding GTPase Middle Region C1H56_00510 PF13167 GTP-binding GTPase N-terminal C1H56_00510 PF01926 50S ribosome-binding GTPase C1H56_00515 PF01145 SPFH domain / Band 7 family C1H56_00515 PF12221 Bacterial membrane protein N terminal C1H56_00520 PF01145 SPFH domain / Band 7 family C1H56_00525 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C1H56_00530 PF04102 SlyX C1H56_00540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1H56_00540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1H56_00545 PF08348 YheO-like PAS domain C1H56_00545 PF13309 HTH domain C1H56_00550 PF02635 DsrE/DsrF-like family C1H56_00555 PF02635 DsrE/DsrF-like family C1H56_00565 PF00164 Ribosomal protein S12/S23 C1H56_00570 PF00177 Ribosomal protein S7p/S5e C1H56_00575 PF00679 Elongation factor G C-terminus C1H56_00575 PF03764 Elongation factor G, domain IV C1H56_00575 PF00009 Elongation factor Tu GTP binding domain C1H56_00575 PF03144 Elongation factor Tu domain 2 C1H56_00575 PF14492 Elongation Factor G, domain II C1H56_00580 PF00009 Elongation factor Tu GTP binding domain C1H56_00580 PF03144 Elongation factor Tu domain 2 C1H56_00580 PF03143 Elongation factor Tu C-terminal domain C1H56_00585 PF04324 BFD-like [2Fe-2S] binding domain C1H56_00590 PF00210 Ferritin-like domain C1H56_00595 PF01250 Ribosomal protein S6 C1H56_00600 PF00436 Single-strand binding protein family C1H56_00605 PF01084 Ribosomal protein S18 C1H56_00610 PF03948 Ribosomal protein L9, C-terminal domain C1H56_00610 PF01281 Ribosomal protein L9, N-terminal domain C1H56_00620 PF00772 DnaB-like helicase N terminal domain C1H56_00620 PF03796 DnaB-like helicase C terminal domain C1H56_00625 PF00842 Alanine racemase, C-terminal domain C1H56_00625 PF01168 Alanine racemase, N-terminal domain C1H56_00630 PF01894 Uncharacterised protein family UPF0047 C1H56_00635 PF00342 Phosphoglucose isomerase C1H56_00640 PF12706 Beta-lactamase superfamily domain C1H56_00650 PF01475 Ferric uptake regulator family C1H56_00655 PF01207 Dihydrouridine synthase (Dus) C1H56_00660 PF09583 Phage shock protein G (Phageshock_PspG) C1H56_00680 PF00175 Oxidoreductase NAD-binding domain C1H56_00680 PF00667 FAD binding domain C1H56_00680 PF00258 Flavodoxin C1H56_00685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1H56_00685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1H56_00690 PF01507 Phosphoadenosine phosphosulfate reductase family C1H56_00755 PF00999 Sodium/hydrogen exchanger family C1H56_00760 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1H56_00760 PF02310 B12 binding domain C1H56_00760 PF02607 B12 binding domain C1H56_00760 PF00809 Pterin binding enzyme C1H56_00760 PF02574 Homocysteine S-methyltransferase C1H56_00765 PF00696 Amino acid kinase family C1H56_00765 PF01842 ACT domain C1H56_00770 PF00266 Aminotransferase class-V C1H56_00780 PF00005 ABC transporter C1H56_00780 PF17755 UvrA DNA-binding domain C1H56_00780 PF17760 UvrA interaction domain C1H56_00785 PF00483 Nucleotidyl transferase C1H56_00790 PF00196 Bacterial regulatory proteins, luxR family C1H56_00795 PF00436 Single-strand binding protein family C1H56_00800 PF00990 Diguanylate cyclase, GGDEF domain C1H56_00800 PF17157 Gammaproteobacterial periplasmic sensor domain C1H56_00800 PF00563 EAL domain C1H56_00820 PF07660 Secretin and TonB N terminus short domain C1H56_00820 PF03958 Bacterial type II/III secretion system short domain C1H56_00820 PF00263 Bacterial type II and III secretion system protein C1H56_00820 PF11741 AMIN domain C1H56_00825 PF01471 Putative peptidoglycan binding domain C1H56_00825 PF13401 AAA domain C1H56_00835 PF00437 Type II/IV secretion system protein C1H56_00840 PF00482 Type II secretion system (T2SS), protein F C1H56_00850 PF00114 Pilin (bacterial filament) C1H56_00850 PF07963 Prokaryotic N-terminal methylation motif C1H56_00855 PF07963 Prokaryotic N-terminal methylation motif C1H56_00855 PF00114 Pilin (bacterial filament) C1H56_00890 PF04085 rod shape-determining protein MreC C1H56_00895 PF04093 rod shape-determining protein MreD C1H56_00900 PF02545 Maf-like protein C1H56_00905 PF00575 S1 RNA binding domain C1H56_00905 PF10150 Ribonuclease E/G family C1H56_00910 PF13116 Protein of unknown function C1H56_00910 PF13502 AsmA-like C-terminal region C1H56_00915 PF00795 Carbon-nitrogen hydrolase C1H56_00920 PF01523 Putative modulator of DNA gyrase C1H56_00930 PF06877 Regulator of ribonuclease activity B C1H56_00945 PF00582 Universal stress protein family C1H56_00955 PF16868 NMT1-like family C1H56_00965 PF02863 Arginine repressor, C-terminal domain C1H56_00965 PF01316 Arginine repressor, DNA binding domain C1H56_00970 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1H56_00970 PF00056 lactate/malate dehydrogenase, NAD binding domain C1H56_00975 PF13520 Amino acid permease C1H56_00980 PF00348 Polyprenyl synthetase C1H56_00985 PF00829 Ribosomal prokaryotic L21 protein C1H56_00990 PF01016 Ribosomal L27 protein C1H56_00995 PF01018 GTP1/OBG C1H56_00995 PF01926 50S ribosome-binding GTPase C1H56_01000 PF06738 Putative threonine/serine exporter C1H56_01005 PF12821 Threonine/Serine exporter, ThrE C1H56_01010 PF00186 Dihydrofolate reductase C1H56_01015 PF00149 Calcineurin-like phosphoesterase C1H56_01020 PF04379 ApaG domain C1H56_01025 PF00398 Ribosomal RNA adenine dimethylase C1H56_01030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1H56_01035 PF09312 SurA N-terminal domain C1H56_01040 PF04453 LPS transport system D C1H56_01040 PF03968 OstA-like protein C1H56_01045 PF05099 Tellurite resistance protein TerB C1H56_01045 PF00226 DnaJ domain C1H56_01075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_01075 PF12729 Four helix bundle sensory module for signal transduction C1H56_01075 PF00672 HAMP domain C1H56_01100 PF01464 Transglycosylase SLT domain C1H56_01100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C1H56_01105 PF04362 Bacterial Fe(2+) trafficking C1H56_01110 PF00730 HhH-GPD superfamily base excision DNA repair protein C1H56_01110 PF00633 Helix-hairpin-helix motif C1H56_01110 PF10576 Iron-sulfur binding domain of endonuclease III C1H56_01110 PF14815 NUDIX domain C1H56_01115 PF02390 Putative methyltransferase C1H56_01120 PF04960 Glutaminase C1H56_01125 PF06969 HemN C-terminal domain C1H56_01125 PF04055 Radical SAM superfamily C1H56_01130 PF01725 Ham1 family C1H56_01140 PF02594 Uncharacterised ACR, YggU family COG1872 C1H56_01145 PF02325 YGGT family C1H56_01150 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1H56_01150 PF03807 NADP oxidoreductase coenzyme F420-dependent C1H56_01155 PF01168 Alanine racemase, N-terminal domain C1H56_01160 PF00437 Type II/IV secretion system protein C1H56_01165 PF00437 Type II/IV secretion system protein C1H56_01175 PF01479 S4 domain C1H56_01175 PF00579 tRNA synthetases class I (W and Y) C1H56_01180 PF03652 Holliday junction resolvase C1H56_01185 PF02622 Uncharacterized ACR, COG1678 C1H56_01190 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C1H56_01190 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C1H56_01195 PF04452 RNA methyltransferase C1H56_01200 PF04231 Endonuclease I C1H56_01205 PF10263 SprT-like family C1H56_01205 PF17283 SprT-like zinc ribbon domain C1H56_01210 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1H56_01210 PF02772 S-adenosylmethionine synthetase, central domain C1H56_01210 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1H56_01215 PF00456 Transketolase, thiamine diphosphate binding domain C1H56_01215 PF02779 Transketolase, pyrimidine binding domain C1H56_01215 PF02780 Transketolase, C-terminal domain C1H56_01220 PF03466 LysR substrate binding domain C1H56_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_01225 PF07715 TonB-dependent Receptor Plug Domain C1H56_01225 PF00593 TonB dependent receptor C1H56_01230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1H56_01230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1H56_01235 PF00162 Phosphoglycerate kinase C1H56_01240 PF01116 Fructose-bisphosphate aldolase class-II C1H56_01250 PF00924 Mechanosensitive ion channel C1H56_01250 PF05552 Conserved TM helix C1H56_01255 PF01810 LysE type translocator C1H56_01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_01260 PF03466 LysR substrate binding domain C1H56_01265 PF04402 Protein of unknown function (DUF541) C1H56_01270 PF00224 Pyruvate kinase, barrel domain C1H56_01270 PF02887 Pyruvate kinase, alpha/beta domain C1H56_01275 PF00455 DeoR C terminal sensor domain C1H56_01275 PF08220 DeoR-like helix-turn-helix domain C1H56_01280 PF01380 SIS domain C1H56_01285 PF03480 Bacterial extracellular solute-binding protein, family 7 C1H56_01340 PF00075 RNase H C1H56_01355 PF00114 Pilin (bacterial filament) C1H56_01355 PF07963 Prokaryotic N-terminal methylation motif C1H56_01365 PF01551 Peptidase family M23 C1H56_01365 PF08525 Opacity-associated protein A N-terminal motif C1H56_01365 PF01476 LysM domain C1H56_01400 PF04002 RadC-like JAB domain C1H56_01425 PF13356 Arm DNA-binding domain C1H56_01425 PF00589 Phage integrase family C1H56_01435 PF04546 Sigma-70, non-essential region C1H56_01435 PF03979 Sigma-70 factor, region 1.1 C1H56_01435 PF00140 Sigma-70 factor, region 1.2 C1H56_01435 PF04545 Sigma-70, region 4 C1H56_01435 PF04539 Sigma-70 region 3 C1H56_01435 PF04542 Sigma-70 region 2 C1H56_01440 PF10410 DnaB-helicase binding domain of primase C1H56_01440 PF08278 DNA primase DnaG DnaB-binding C1H56_01440 PF08275 DNA primase catalytic core, N-terminal domain C1H56_01440 PF01807 CHC2 zinc finger C1H56_01445 PF09424 Yqey-like protein C1H56_01450 PF01165 Ribosomal protein S21 C1H56_01455 PF00814 Glycoprotease family C1H56_01460 PF00561 alpha/beta hydrolase fold C1H56_01465 PF02660 Glycerol-3-phosphate acyltransferase C1H56_01475 PF02152 Dihydroneopterin aldolase C1H56_01480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1H56_01485 PF02673 Bacitracin resistance protein BacA C1H56_01490 PF04977 Septum formation initiator C1H56_01495 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1H56_01500 PF02542 YgbB family C1H56_01505 PF01142 tRNA pseudouridine synthase D (TruD) C1H56_01510 PF01975 Survival protein SurE C1H56_01520 PF01551 Peptidase family M23 C1H56_01520 PF01476 LysM domain C1H56_01525 PF04545 Sigma-70, region 4 C1H56_01525 PF04539 Sigma-70 region 3 C1H56_01525 PF04542 Sigma-70 region 2 C1H56_01525 PF00140 Sigma-70 factor, region 1.2 C1H56_01530 PF01624 MutS domain I C1H56_01530 PF05192 MutS domain III C1H56_01530 PF05190 MutS family domain IV C1H56_01530 PF00488 MutS domain V C1H56_01530 PF05188 MutS domain II C1H56_01535 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_01545 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_01550 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_01555 PF00005 ABC transporter C1H56_01555 PF12857 TOBE-like domain C1H56_01560 PF02464 Competence-damaged protein C1H56_01565 PF00154 recA bacterial DNA recombination protein C1H56_01570 PF02631 RecX family C1H56_01575 PF02272 DHHA1 domain C1H56_01575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1H56_01575 PF01411 tRNA synthetases class II (A) C1H56_01580 PF01842 ACT domain C1H56_01580 PF00696 Amino acid kinase family C1H56_01580 PF13840 ACT domain C1H56_01585 PF02599 Global regulator protein family C1H56_01630 PF04277 Oxaloacetate decarboxylase, gamma chain C1H56_01635 PF00682 HMGL-like C1H56_01635 PF02436 Conserved carboxylase domain C1H56_01635 PF00364 Biotin-requiring enzyme C1H56_01640 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1H56_01650 PF09335 SNARE associated Golgi protein C1H56_01655 PF05193 Peptidase M16 inactive domain C1H56_01655 PF00675 Insulinase (Peptidase family M16) C1H56_01660 PF04262 Glutamate-cysteine ligase C1H56_01665 PF02664 S-Ribosylhomocysteinase (LuxS) C1H56_01670 PF00571 CBS domain C1H56_01670 PF01595 Cyclin M transmembrane N-terminal domain C1H56_01670 PF03471 Transporter associated domain C1H56_01675 PF01578 Cytochrome C assembly protein C1H56_01680 PF00448 SRP54-type protein, GTPase domain C1H56_01680 PF02881 SRP54-type protein, helical bundle domain C1H56_01680 PF02978 Signal peptide binding domain C1H56_01685 PF00886 Ribosomal protein S16 C1H56_01690 PF01782 RimM N-terminal domain C1H56_01690 PF05239 PRC-barrel domain C1H56_01695 PF01746 tRNA (Guanine-1)-methyltransferase C1H56_01700 PF01245 Ribosomal protein L19 C1H56_01705 PF13180 PDZ domain C1H56_01710 PF00595 PDZ domain C1H56_01720 PF03969 AFG1-like ATPase C1H56_01725 PF00572 Ribosomal protein L13 C1H56_01730 PF00380 Ribosomal protein S9/S16 C1H56_01735 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C1H56_01735 PF00355 Rieske [2Fe-2S] domain C1H56_01740 PF00033 Cytochrome b/b6/petB C1H56_01740 PF00032 Cytochrome b(C-terminal)/b6/petD C1H56_01745 PF02167 Cytochrome C1 family C1H56_01750 PF02798 Glutathione S-transferase, N-terminal domain C1H56_01750 PF00043 Glutathione S-transferase, C-terminal domain C1H56_01755 PF04386 Stringent starvation protein B C1H56_01760 PF04972 BON domain C1H56_01765 PF13580 SIS domain C1H56_01770 PF02021 Uncharacterised protein family UPF0102 C1H56_01775 PF04348 LppC putative lipoprotein C1H56_01780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1H56_01790 PF00440 Bacterial regulatory proteins, tetR family C1H56_01795 PF00156 Phosphoribosyl transferase domain C1H56_01800 PF00484 Carbonic anhydrase C1H56_01805 PF00916 Sulfate permease family C1H56_01805 PF01740 STAS domain C1H56_01810 PF00005 ABC transporter C1H56_01815 PF01061 ABC-2 type transporter C1H56_01820 PF02569 Pantoate-beta-alanine ligase C1H56_01825 PF02548 Ketopantoate hydroxymethyltransferase C1H56_01830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1H56_01835 PF12627 Probable RNA and SrmB- binding site of polymerase A C1H56_01835 PF01743 Poly A polymerase head domain C1H56_01835 PF12626 Polymerase A arginine-rich C-terminus C1H56_01840 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1H56_01845 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1H56_01850 PF03749 Sugar fermentation stimulation protein RE domain C1H56_01850 PF17746 SfsA N-terminal OB domain C1H56_01860 PF00271 Helicase conserved C-terminal domain C1H56_01860 PF04408 Helicase associated domain (HA2) C1H56_01860 PF08482 ATP-dependent helicase C-terminal C1H56_01860 PF00270 DEAD/DEAH box helicase C1H56_01865 PF00905 Penicillin binding protein transpeptidase domain C1H56_01865 PF14814 Bifunctional transglycosylase second domain C1H56_01865 PF00912 Transglycosylase C1H56_01870 PF01734 Patatin-like phospholipase C1H56_01875 PF00330 Aconitase family (aconitate hydratase) C1H56_01875 PF06434 Aconitate hydratase 2 N-terminus C1H56_01875 PF11791 Aconitate B N-terminal domain C1H56_01880 PF06062 Uncharacterised protein family (UPF0231) C1H56_01885 PF00543 Nitrogen regulatory protein P-II C1H56_01890 PF00909 Ammonium Transporter Family C1H56_01895 PF13416 Bacterial extracellular solute-binding protein C1H56_01905 PF08402 TOBE domain C1H56_01905 PF00005 ABC transporter C1H56_01910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1H56_01910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1H56_01910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1H56_01910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1H56_01915 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain C1H56_01915 PF06165 Glycosyltransferase family 36 C1H56_01920 PF00728 Glycosyl hydrolase family 20, catalytic domain C1H56_01920 PF02838 Glycosyl hydrolase family 20, domain 2 C1H56_01925 PF01869 BadF/BadG/BcrA/BcrD ATPase family C1H56_01935 PF00005 ABC transporter C1H56_01935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_01940 PF00005 ABC transporter C1H56_01940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_01945 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_01945 PF12911 N-terminal TM domain of oligopeptide transport permease C C1H56_01950 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_01955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_01965 PF00512 His Kinase A (phospho-acceptor) domain C1H56_01965 PF09308 LuxQ, periplasmic C1H56_01965 PF00072 Response regulator receiver domain C1H56_01970 PF08468 Methyltransferase small domain N-terminal C1H56_01970 PF05175 Methyltransferase small domain C1H56_01975 PF01594 AI-2E family transporter C1H56_01980 PF00202 Aminotransferase class-III C1H56_01985 PF01521 Iron-sulphur cluster biosynthesis C1H56_01995 PF00873 AcrB/AcrD/AcrF family C1H56_02000 PF01551 Peptidase family M23 C1H56_02000 PF04225 Opacity-associated protein A LysM-like domain C1H56_02005 PF00579 tRNA synthetases class I (W and Y) C1H56_02005 PF01479 S4 domain C1H56_02010 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C1H56_02015 PF13609 Gram-negative porin C1H56_02020 PF01272 Transcription elongation factor, GreA/GreB, C-term C1H56_02020 PF03449 Transcription elongation factor, N-terminal C1H56_02025 PF01985 CRS1 / YhbY (CRM) domain C1H56_02030 PF01728 FtsJ-like methyltransferase C1H56_02035 PF17862 AAA+ lid domain C1H56_02035 PF06480 FtsH Extracellular C1H56_02035 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_02035 PF01434 Peptidase family M41 C1H56_02040 PF00809 Pterin binding enzyme C1H56_02045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1H56_02045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1H56_02045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1H56_02045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1H56_02055 PF03840 Preprotein translocase SecG subunit C1H56_02070 PF17384 RimP C-terminal SH3 domain C1H56_02070 PF02576 RimP N-terminal domain C1H56_02075 PF00575 S1 RNA binding domain C1H56_02075 PF08529 NusA N-terminal domain C1H56_02075 PF13184 NusA-like KH domain C1H56_02080 PF08364 Bacterial translation initiation factor IF-2 associated region C1H56_02080 PF11987 Translation-initiation factor 2 C1H56_02080 PF00009 Elongation factor Tu GTP binding domain C1H56_02080 PF04760 Translation initiation factor IF-2, N-terminal region C1H56_02085 PF02033 Ribosome-binding factor A C1H56_02090 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1H56_02090 PF09157 Pseudouridine synthase II TruB, C-terminal C1H56_02090 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1H56_02095 PF00312 Ribosomal protein S15 C1H56_02100 PF03725 3' exoribonuclease family, domain 2 C1H56_02100 PF00013 KH domain C1H56_02100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1H56_02100 PF01138 3' exoribonuclease family, domain 1 C1H56_02100 PF00575 S1 RNA binding domain C1H56_02105 PF13181 Tetratricopeptide repeat C1H56_02105 PF07719 Tetratricopeptide repeat C1H56_02130 PF00563 EAL domain C1H56_02130 PF03707 Bacterial signalling protein N terminal repeat C1H56_02130 PF00990 Diguanylate cyclase, GGDEF domain C1H56_02140 PF13508 Acetyltransferase (GNAT) domain C1H56_02155 PF03707 Bacterial signalling protein N terminal repeat C1H56_02155 PF00563 EAL domain C1H56_02155 PF00990 Diguanylate cyclase, GGDEF domain C1H56_02160 PF00009 Elongation factor Tu GTP binding domain C1H56_02160 PF03144 Elongation factor Tu domain 2 C1H56_02160 PF16658 Class II release factor RF3, C-terminal domain C1H56_02165 PF00270 DEAD/DEAH box helicase C1H56_02165 PF00271 Helicase conserved C-terminal domain C1H56_02170 PF05175 Methyltransferase small domain C1H56_02175 PF05525 Branched-chain amino acid transport protein C1H56_02185 PF01336 OB-fold nucleic acid binding domain C1H56_02185 PF00152 tRNA synthetases class II (D, K and N) C1H56_02190 PF00158 Sigma-54 interaction domain C1H56_02190 PF00072 Response regulator receiver domain C1H56_02190 PF02954 Bacterial regulatory protein, Fis family C1H56_02200 PF00248 Aldo/keto reductase family C1H56_02205 PF02976 DNA mismatch repair enzyme MutH C1H56_02210 PF00293 NUDIX domain C1H56_02215 PF01590 GAF domain C1H56_02215 PF05524 PEP-utilising enzyme, N-terminal C1H56_02215 PF00391 PEP-utilising enzyme, mobile domain C1H56_02215 PF02896 PEP-utilising enzyme, TIM barrel domain C1H56_02220 PF01925 Sulfite exporter TauE/SafE C1H56_02225 PF01790 Prolipoprotein diacylglyceryl transferase C1H56_02230 PF00303 Thymidylate synthase C1H56_02235 PF02690 Na+/Pi-cotransporter C1H56_02240 PF03466 LysR substrate binding domain C1H56_02240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_02245 PF01022 Bacterial regulatory protein, arsR family C1H56_02250 PF01649 Ribosomal protein S20 C1H56_02255 PF03023 Lipid II flippase MurJ C1H56_02260 PF06574 FAD synthetase C1H56_02260 PF01687 Riboflavin kinase C1H56_02265 PF06827 Zinc finger found in FPG and IleRS C1H56_02265 PF08264 Anticodon-binding domain of tRNA C1H56_02265 PF00133 tRNA synthetases class I (I, L, M and V) C1H56_02270 PF01252 Signal peptidase (SPase) II C1H56_02275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1H56_02280 PF02401 LytB protein C1H56_02285 PF02554 Carbon starvation protein CstA C1H56_02300 PF13580 SIS domain C1H56_02305 PF03702 Anhydro-N-acetylmuramic acid kinase C1H56_02310 PF00933 Glycosyl hydrolase family 3 N terminal domain C1H56_02315 PF04397 LytTr DNA-binding domain C1H56_02315 PF00072 Response regulator receiver domain C1H56_02320 PF07694 5TMR of 5TMR-LYT C1H56_02320 PF06580 Histidine kinase C1H56_02325 PF00793 DAHP synthetase I family C1H56_02330 PF02153 Prephenate dehydrogenase C1H56_02330 PF01817 Chorismate mutase type II C1H56_02335 PF07238 PilZ domain C1H56_02340 PF12848 ABC transporter C1H56_02340 PF00005 ABC transporter C1H56_02345 PF01464 Transglycosylase SLT domain C1H56_02345 PF14718 Soluble lytic murein transglycosylase L domain C1H56_02350 PF01371 Trp repressor protein C1H56_02355 PF01931 Protein of unknown function DUF84 C1H56_02360 PF00990 Diguanylate cyclase, GGDEF domain C1H56_02360 PF00563 EAL domain C1H56_02365 PF13416 Bacterial extracellular solute-binding protein C1H56_02370 PF00800 Prephenate dehydratase C1H56_02370 PF01817 Chorismate mutase type II C1H56_02375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1H56_02380 PF13525 Outer membrane lipoprotein C1H56_02385 PF01479 S4 domain C1H56_02385 PF00849 RNA pseudouridylate synthase C1H56_02395 PF02861 Clp amino terminal domain, pathogenicity island component C1H56_02395 PF17871 AAA lid domain C1H56_02395 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_02395 PF10431 C-terminal, D2-small domain, of ClpB protein C1H56_02395 PF07724 AAA domain (Cdc48 subfamily) C1H56_02430 PF00881 Nitroreductase family C1H56_02435 PF00037 4Fe-4S binding domain C1H56_02445 PF04381 Putative exonuclease, RdgC C1H56_02450 PF00486 Transcriptional regulatory protein, C terminal C1H56_02450 PF00072 Response regulator receiver domain C1H56_02455 PF00989 PAS fold C1H56_02455 PF11808 Phosphate regulon sensor protein PhoR C1H56_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_02455 PF00512 His Kinase A (phospho-acceptor) domain C1H56_02460 PF12849 PBP superfamily domain C1H56_02465 PF02541 Ppx/GppA phosphatase family C1H56_02470 PF13089 Polyphosphate kinase N-terminal domain C1H56_02470 PF17941 Polyphosphate kinase C-terminal domain 1 C1H56_02470 PF02503 Polyphosphate kinase middle domain C1H56_02470 PF13090 Polyphosphate kinase C-terminal domain 2 C1H56_02475 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_02480 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_02485 PF00005 ABC transporter C1H56_02490 PF01895 PhoU domain C1H56_02495 PF03976 Polyphosphate kinase 2 (PPK2) C1H56_02500 PF03932 CutC family C1H56_02505 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1H56_02505 PF00578 AhpC/TSA family C1H56_02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_02510 PF03466 LysR substrate binding domain C1H56_02515 PF01274 Malate synthase C1H56_02520 PF00463 Isocitrate lyase family C1H56_02525 PF00571 CBS domain C1H56_02530 PF02547 Queuosine biosynthesis protein C1H56_02540 PF01702 Queuine tRNA-ribosyltransferase C1H56_02545 PF02699 Preprotein translocase subunit C1H56_02550 PF07549 SecD/SecF GG Motif C1H56_02550 PF13721 SecD export protein N-terminal TM region C1H56_02550 PF02355 Protein export membrane protein C1H56_02555 PF02355 Protein export membrane protein C1H56_02555 PF07549 SecD/SecF GG Motif C1H56_02560 PF00459 Inositol monophosphatase family C1H56_02565 PF00588 SpoU rRNA Methylase family C1H56_02570 PF02082 Transcriptional regulator C1H56_02575 PF00266 Aminotransferase class-V C1H56_02580 PF01592 NifU-like N terminal domain C1H56_02585 PF01521 Iron-sulphur cluster biosynthesis C1H56_02590 PF07743 HSCB C-terminal oligomerisation domain C1H56_02590 PF00226 DnaJ domain C1H56_02595 PF00012 Hsp70 protein C1H56_02600 PF00111 2Fe-2S iron-sulfur cluster binding domain C1H56_02605 PF04384 Iron-sulphur cluster assembly C1H56_02610 PF00883 Cytosol aminopeptidase family, catalytic domain C1H56_02610 PF12404 Peptidase C1H56_02615 PF00334 Nucleoside diphosphate kinase C1H56_02620 PF04055 Radical SAM superfamily C1H56_02625 PF13464 Domain of unknown function (DUF4115) C1H56_02630 PF04551 GcpE protein C1H56_02635 PF03129 Anticodon binding domain C1H56_02635 PF13393 Histidyl-tRNA synthetase C1H56_02640 PF09976 Tetratricopeptide repeat-like domain C1H56_02645 PF13360 PQQ-like domain C1H56_02650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1H56_02650 PF01926 50S ribosome-binding GTPase C1H56_02665 PF02601 Exonuclease VII, large subunit C1H56_02665 PF13742 OB-fold nucleic acid binding domain C1H56_02670 PF00478 IMP dehydrogenase / GMP reductase domain C1H56_02670 PF00571 CBS domain C1H56_02675 PF02540 NAD synthase C1H56_02675 PF00958 GMP synthase C terminal domain C1H56_02675 PF00117 Glutamine amidotransferase class-I C1H56_02680 PF06483 Chitinase C C1H56_02680 PF00704 Glycosyl hydrolases family 18 C1H56_02685 PF01184 GPR1/FUN34/yaaH family C1H56_02690 PF00857 Isochorismatase family C1H56_02690 PF00550 Phosphopantetheine attachment site C1H56_02695 PF00501 AMP-binding enzyme C1H56_02695 PF13193 AMP-binding enzyme C-terminal domain C1H56_02700 PF00425 chorismate binding enzyme C1H56_02715 PF01497 Periplasmic binding protein C1H56_02720 PF01032 FecCD transport family C1H56_02725 PF01032 FecCD transport family C1H56_02730 PF00005 ABC transporter C1H56_02735 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C1H56_02735 PF01648 4'-phosphopantetheinyl transferase superfamily C1H56_02740 PF03466 LysR substrate binding domain C1H56_02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_02745 PF14864 Alkyl sulfatase C-terminal C1H56_02745 PF14863 Alkyl sulfatase dimerisation C1H56_02745 PF00753 Metallo-beta-lactamase superfamily C1H56_02750 PF01235 Sodium:alanine symporter family C1H56_02755 PF01266 FAD dependent oxidoreductase C1H56_02760 PF03466 LysR substrate binding domain C1H56_02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_02775 PF00072 Response regulator receiver domain C1H56_02775 PF12431 Transcriptional regulator C1H56_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_02780 PF17203 Single cache domain 3 C1H56_02785 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1H56_02790 PF00682 HMGL-like C1H56_02790 PF00364 Biotin-requiring enzyme C1H56_02790 PF02436 Conserved carboxylase domain C1H56_02795 PF04277 Oxaloacetate decarboxylase, gamma chain C1H56_02800 PF03390 2-hydroxycarboxylate transporter family C1H56_02805 PF08218 Citrate lyase ligase C-terminal domain C1H56_02810 PF06857 Malonate decarboxylase delta subunit (MdcD) C1H56_02815 PF03328 HpcH/HpaI aldolase/citrate lyase family C1H56_02820 PF04223 Citrate lyase, alpha subunit (CitF) C1H56_02825 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase C1H56_02830 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C1H56_02840 PF00588 SpoU rRNA Methylase family C1H56_02840 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1H56_02845 PF00037 4Fe-4S binding domain C1H56_02845 PF11953 Domain of unknown function (DUF3470) C1H56_02915 PF00171 Aldehyde dehydrogenase family C1H56_02920 PF12561 ToxR activated gene A lipoprotein domain C1H56_02920 PF00041 Fibronectin type III domain C1H56_02935 PF08534 Redoxin C1H56_02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_02945 PF00486 Transcriptional regulatory protein, C terminal C1H56_02955 PF05946 Toxin-coregulated pilus subunit TcpA C1H56_02955 PF07963 Prokaryotic N-terminal methylation motif C1H56_02965 PF10671 Toxin co-regulated pilus biosynthesis protein Q C1H56_02985 PF17456 Toxin-coregulated pilus protein S C1H56_02990 PF00437 Type II/IV secretion system protein C1H56_02995 PF00482 Type II secretion system (T2SS), protein F C1H56_03000 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F C1H56_03005 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family C1H56_03010 PF06750 Bacterial Peptidase A24 N-terminal domain C1H56_03010 PF01478 Type IV leader peptidase family C1H56_03015 PF02743 Cache domain C1H56_03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_03015 PF00672 HAMP domain C1H56_03030 PF01551 Peptidase family M23 C1H56_03030 PF04225 Opacity-associated protein A LysM-like domain C1H56_03040 PF17291 N-terminal domain of M60-like peptidases C1H56_03040 PF13322 Domain of unknown function (DUF4092) C1H56_03040 PF13402 Peptidase M60, enhancin and enhancin-like C1H56_03045 PF13356 Arm DNA-binding domain C1H56_03045 PF00589 Phage integrase family C1H56_03055 PF13356 Arm DNA-binding domain C1H56_03055 PF00589 Phage integrase family C1H56_03065 PF01668 SmpB protein C1H56_03070 PF03364 Polyketide cyclase / dehydrase and lipid transport C1H56_03075 PF03658 RnfH family Ubiquitin C1H56_03080 PF04355 SmpA / OmlA family C1H56_03085 PF02463 RecF/RecN/SMC N terminal domain C1H56_03090 PF01513 ATP-NAD kinase C1H56_03095 PF01025 GrpE C1H56_03100 PF00012 Hsp70 protein C1H56_03105 PF00684 DnaJ central domain C1H56_03105 PF00226 DnaJ domain C1H56_03105 PF01556 DnaJ C terminal domain C1H56_03110 PF00114 Pilin (bacterial filament) C1H56_03110 PF07963 Prokaryotic N-terminal methylation motif C1H56_03115 PF14245 Type IV pilin PilA C1H56_03115 PF07963 Prokaryotic N-terminal methylation motif C1H56_03140 PF03806 AbgT putative transporter family C1H56_03145 PF14437 MafB19-like deaminase C1H56_03150 PF01464 Transglycosylase SLT domain C1H56_03150 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_03160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C1H56_03160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1H56_03160 PF02769 AIR synthase related protein, C-terminal domain C1H56_03165 PF01797 Transposase IS200 like C1H56_03175 PF06786 Uncharacterised protein family (UPF0253) C1H56_03190 PF04073 Aminoacyl-tRNA editing domain C1H56_03190 PF03129 Anticodon binding domain C1H56_03190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1H56_03195 PF18389 TrmO C-terminal domain C1H56_03195 PF01980 tRNA-methyltransferase O C1H56_03200 PF01197 Ribosomal protein L31 C1H56_03205 PF00444 Ribosomal protein L36 C1H56_03210 PF03806 AbgT putative transporter family C1H56_03215 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C1H56_03225 PF13302 Acetyltransferase (GNAT) domain C1H56_03240 PF04287 tRNA pseudouridine synthase C C1H56_03245 PF00849 RNA pseudouridylate synthase C1H56_03250 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1H56_03250 PF02779 Transketolase, pyrimidine binding domain C1H56_03250 PF02780 Transketolase, C-terminal domain C1H56_03255 PF00348 Polyprenyl synthetase C1H56_03260 PF02609 Exonuclease VII small subunit C1H56_03265 PF01618 MotA/TolQ/ExbB proton channel family C1H56_03270 PF00691 OmpA family C1H56_03270 PF13677 Membrane MotB of proton-channel complex MotA/MotB C1H56_03275 PF02568 Thiamine biosynthesis protein (ThiI) C1H56_03275 PF02926 THUMP domain C1H56_03280 PF03466 LysR substrate binding domain C1H56_03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_03285 PF04241 Protein of unknown function (DUF423) C1H56_03290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1H56_03290 PF01367 5'-3' exonuclease, C-terminal SAM fold C1H56_03295 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C1H56_03295 PF03641 Possible lysine decarboxylase C1H56_03295 PF11892 Domain of unknown function (DUF3412) C1H56_03300 PF00990 Diguanylate cyclase, GGDEF domain C1H56_03310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C1H56_03310 PF14489 QueF-like protein C1H56_03315 PF07348 Syd protein (SUKH-2) C1H56_03320 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C1H56_03325 PF03180 NLPA lipoprotein C1H56_03330 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_03335 PF09383 NIL domain C1H56_03335 PF00005 ABC transporter C1H56_03345 PF00356 Bacterial regulatory proteins, lacI family C1H56_03350 PF00367 phosphotransferase system, EIIB C1H56_03350 PF02378 Phosphotransferase system, EIIC C1H56_03355 PF16657 Maltogenic Amylase, C-terminal domain C1H56_03355 PF00128 Alpha amylase, catalytic domain C1H56_03380 PF13533 Biotin-lipoyl like C1H56_03385 PF00873 AcrB/AcrD/AcrF family C1H56_03390 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1H56_03395 PF02350 UDP-N-acetylglucosamine 2-epimerase C1H56_03400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1H56_03400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1H56_03400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1H56_03405 PF14602 Hexapeptide repeat of succinyl-transferase C1H56_03405 PF12464 Maltose acetyltransferase C1H56_03425 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_03435 PF00534 Glycosyl transferases group 1 C1H56_03435 PF00862 Sucrose synthase C1H56_03445 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1H56_03460 PF12561 ToxR activated gene A lipoprotein domain C1H56_03460 PF17945 Beta/Gamma crystallin C1H56_03475 PF02397 Bacterial sugar transferase C1H56_03485 PF02563 Polysaccharide biosynthesis/export protein C1H56_03485 PF10531 SLBB domain C1H56_03485 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C1H56_03490 PF13614 AAA domain C1H56_03490 PF13807 G-rich domain on putative tyrosine kinase C1H56_03490 PF02706 Chain length determinant protein C1H56_03510 PF00464 Serine hydroxymethyltransferase C1H56_03520 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1H56_03520 PF04055 Radical SAM superfamily C1H56_03525 PF03099 Biotin/lipoate A/B protein ligase family C1H56_03530 PF04359 Protein of unknown function (DUF493) C1H56_03535 PF00768 D-alanyl-D-alanine carboxypeptidase C1H56_03535 PF07943 Penicillin-binding protein 5, C-terminal domain C1H56_03540 PF05036 Sporulation related domain C1H56_03540 PF03330 Lytic transglycolase C1H56_03545 PF01098 Cell cycle protein C1H56_03550 PF03717 Penicillin-binding Protein dimerisation domain C1H56_03550 PF00905 Penicillin binding protein transpeptidase domain C1H56_03555 PF02590 Predicted SPOUT methyltransferase C1H56_03565 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C1H56_03565 PF06144 DNA polymerase III, delta subunit C1H56_03570 PF04390 Lipopolysaccharide-assembly C1H56_03575 PF08264 Anticodon-binding domain of tRNA C1H56_03575 PF00133 tRNA synthetases class I (I, L, M and V) C1H56_03575 PF13603 Leucyl-tRNA synthetase, Domain 2 C1H56_03580 PF07295 Zinc-ribbon containing domain C1H56_03585 PF00795 Carbon-nitrogen hydrolase C1H56_03590 PF00571 CBS domain C1H56_03590 PF03471 Transporter associated domain C1H56_03595 PF02130 Uncharacterized protein family UPF0054 C1H56_03600 PF02562 PhoH-like protein C1H56_03605 PF04055 Radical SAM superfamily C1H56_03605 PF01938 TRAM domain C1H56_03605 PF00919 Uncharacterized protein family UPF0004 C1H56_03610 PF01494 FAD binding domain C1H56_03615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C1H56_03620 PF00391 PEP-utilising enzyme, mobile domain C1H56_03620 PF02896 PEP-utilising enzyme, TIM barrel domain C1H56_03620 PF05524 PEP-utilising enzyme, N-terminal C1H56_03625 PF00381 PTS HPr component phosphorylation site C1H56_03635 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_03645 PF04354 ZipA, C-terminal FtsZ-binding domain C1H56_03650 PF00533 BRCA1 C Terminus (BRCT) domain C1H56_03650 PF01653 NAD-dependent DNA ligase adenylation domain C1H56_03650 PF03120 NAD-dependent DNA ligase OB-fold domain C1H56_03650 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1H56_03650 PF12826 Helix-hairpin-helix motif C1H56_03660 PF13609 Gram-negative porin C1H56_03670 PF13411 MerR HTH family regulatory protein C1H56_03675 PF01957 NfeD-like C-terminal, partner-binding C1H56_03680 PF01145 SPFH domain / Band 7 family C1H56_03680 PF16200 C-terminal region of band_7 C1H56_03690 PF00085 Thioredoxin C1H56_03700 PF00106 short chain dehydrogenase C1H56_03705 PF08338 Domain of unknown function (DUF1731) C1H56_03705 PF01370 NAD dependent epimerase/dehydratase family C1H56_03710 PF12850 Calcineurin-like phosphoesterase superfamily domain C1H56_03720 PF17323 Trans-membrane regulatory protein ToxS C1H56_03725 PF00486 Transcriptional regulatory protein, C terminal C1H56_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_03730 PF00183 Hsp90 protein C1H56_03735 PF05191 Adenylate kinase, active site lid C1H56_03740 PF00762 Ferrochelatase C1H56_03745 PF00854 POT family C1H56_03750 PF02357 Transcription termination factor nusG C1H56_03755 PF13537 Glutamine amidotransferase domain C1H56_03755 PF00733 Asparagine synthase C1H56_03760 PF00999 Sodium/hydrogen exchanger family C1H56_03760 PF02254 TrkA-N domain C1H56_03765 PF01047 MarR family C1H56_03765 PF00480 ROK family C1H56_03770 PF01979 Amidohydrolase family C1H56_03775 PF00367 phosphotransferase system, EIIB C1H56_03775 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C1H56_03775 PF02378 Phosphotransferase system, EIIC C1H56_03780 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1H56_03780 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C1H56_03790 PF01416 tRNA pseudouridine synthase C1H56_03795 PF01039 Carboxyl transferase domain C1H56_03795 PF17848 Acetyl-coA carboxylase zinc finger domain C1H56_03800 PF02875 Mur ligase family, glutamate ligase domain C1H56_03800 PF08245 Mur ligase middle domain C1H56_03805 PF05036 Sporulation related domain C1H56_03810 PF02674 Colicin V production protein C1H56_03815 PF00156 Phosphoribosyl transferase domain C1H56_03820 PF03553 Na+/H+ antiporter family C1H56_03820 PF13726 Na+-H+ antiporter family C1H56_03825 PF00929 Exonuclease C1H56_03830 PF18393 MotY N-terminal domain C1H56_03830 PF00691 OmpA family C1H56_03835 PF10952 Protein of unknown function (DUF2753) C1H56_03840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_03845 PF10576 Iron-sulfur binding domain of endonuclease III C1H56_03845 PF00730 HhH-GPD superfamily base excision DNA repair protein C1H56_03845 PF00633 Helix-hairpin-helix motif C1H56_03850 PF02508 Rnf-Nqr subunit, membrane protein C1H56_03855 PF04205 FMN-binding domain C1H56_03860 PF03116 NQR2, RnfD, RnfE family C1H56_03865 PF13375 RnfC Barrel sandwich hybrid domain C1H56_03865 PF10531 SLBB domain C1H56_03865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1H56_03865 PF12838 4Fe-4S dicluster domain C1H56_03870 PF04060 Putative Fe-S cluster C1H56_03875 PF02508 Rnf-Nqr subunit, membrane protein C1H56_03885 PF04851 Type III restriction enzyme, res subunit C1H56_03885 PF17757 UvrB interaction domain C1H56_03885 PF00271 Helicase conserved C-terminal domain C1H56_03885 PF02151 UvrB/uvrC motif C1H56_03885 PF12344 Ultra-violet resistance protein B C1H56_03895 PF00158 Sigma-54 interaction domain C1H56_03895 PF00072 Response regulator receiver domain C1H56_03895 PF02954 Bacterial regulatory protein, Fis family C1H56_03900 PF01627 Hpt domain C1H56_03905 PF01933 Uncharacterised protein family UPF0052 C1H56_03910 PF06463 Molybdenum Cofactor Synthesis C C1H56_03910 PF04055 Radical SAM superfamily C1H56_03915 PF00994 Probable molybdopterin binding domain C1H56_03920 PF01967 MoaC family C1H56_03925 PF02597 ThiS family C1H56_03930 PF02391 MoaE protein C1H56_03935 PF07694 5TMR of 5TMR-LYT C1H56_03935 PF00990 Diguanylate cyclase, GGDEF domain C1H56_03940 PF03061 Thioesterase superfamily C1H56_03940 PF00571 CBS domain C1H56_03940 PF07085 DRTGG domain C1H56_03940 PF00392 Bacterial regulatory proteins, gntR family C1H56_03950 PF00403 Heavy-metal-associated domain C1H56_03955 PF01048 Phosphorylase superfamily C1H56_03965 PF01588 Putative tRNA binding domain C1H56_03965 PF09334 tRNA synthetases class I (M) C1H56_03970 PF10609 NUBPL iron-transfer P-loop NTPase C1H56_03980 PF00485 Phosphoribulokinase / Uridine kinase family C1H56_03985 PF05170 AsmA family C1H56_03990 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C1H56_03990 PF12557 Cob(I)alamin adenosyltransferase N terminal C1H56_03995 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1H56_04000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C1H56_04015 PF08281 Sigma-70, region 4 C1H56_04015 PF04542 Sigma-70 region 2 C1H56_04025 PF02803 Thiolase, C-terminal domain C1H56_04025 PF00108 Thiolase, N-terminal domain C1H56_04030 PF00378 Enoyl-CoA hydratase/isomerase C1H56_04030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1H56_04030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1H56_04035 PF00881 Nitroreductase family C1H56_04040 PF03466 LysR substrate binding domain C1H56_04040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_04045 PF00072 Response regulator receiver domain C1H56_04055 PF04304 Protein of unknown function (DUF454) C1H56_04060 PF00156 Phosphoribosyl transferase domain C1H56_04065 PF12169 DNA polymerase III subunits gamma and tau domain III C1H56_04065 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C1H56_04065 PF12170 DNA polymerase III tau subunit V interacting with alpha C1H56_04070 PF02575 YbaB/EbfC DNA-binding family C1H56_04075 PF13662 Toprim domain C1H56_04075 PF02132 RecR protein C1H56_04080 PF03692 Putative zinc- or iron-chelating domain C1H56_04085 PF03692 Putative zinc- or iron-chelating domain C1H56_04090 PF00106 short chain dehydrogenase C1H56_04095 PF08496 Peptidase family S49 N-terminal C1H56_04095 PF01343 Peptidase family S49 C1H56_04100 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_04105 PF01037 Lrp/AsnC ligand binding domain C1H56_04105 PF13404 AsnC-type helix-turn-helix domain C1H56_04120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1H56_04130 PF00990 Diguanylate cyclase, GGDEF domain C1H56_04130 PF08448 PAS fold C1H56_04140 PF01022 Bacterial regulatory protein, arsR family C1H56_04145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1H56_04145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1H56_04160 PF00704 Glycosyl hydrolases family 18 C1H56_04160 PF06483 Chitinase C C1H56_04170 PF01161 Phosphatidylethanolamine-binding protein C1H56_04190 PF03481 Putative GTP-binding controlling metal-binding C1H56_04190 PF01300 Telomere recombination C1H56_04205 PF00072 Response regulator receiver domain C1H56_04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_04215 PF00512 His Kinase A (phospho-acceptor) domain C1H56_04215 PF00989 PAS fold C1H56_04215 PF13188 PAS domain C1H56_04215 PF13426 PAS domain C1H56_04220 PF00512 His Kinase A (phospho-acceptor) domain C1H56_04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_04225 PF00563 EAL domain C1H56_04225 PF00990 Diguanylate cyclase, GGDEF domain C1H56_04225 PF03707 Bacterial signalling protein N terminal repeat C1H56_04225 PF13188 PAS domain C1H56_04230 PF00072 Response regulator receiver domain C1H56_04230 PF00158 Sigma-54 interaction domain C1H56_04230 PF02954 Bacterial regulatory protein, Fis family C1H56_04235 PF00512 His Kinase A (phospho-acceptor) domain C1H56_04235 PF08448 PAS fold C1H56_04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_04235 PF00072 Response regulator receiver domain C1H56_04235 PF13188 PAS domain C1H56_04245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_04250 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_04255 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_04255 PF12911 N-terminal TM domain of oligopeptide transport permease C C1H56_04260 PF00005 ABC transporter C1H56_04260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_04265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_04265 PF00005 ABC transporter C1H56_04270 PF13409 Glutathione S-transferase, N-terminal domain C1H56_04275 PF01515 Phosphate acetyl/butaryl transferase C1H56_04275 PF07085 DRTGG domain C1H56_04280 PF00871 Acetokinase family C1H56_04285 PF04217 Protein of unknown function, DUF412 C1H56_04290 PF09905 DNA-binding protein VF530 C1H56_04300 PF02653 Branched-chain amino acid transport system / permease component C1H56_04305 PF00005 ABC transporter C1H56_04310 PF00990 Diguanylate cyclase, GGDEF domain C1H56_04315 PF01207 Dihydrouridine synthase (Dus) C1H56_04320 PF07517 SecA DEAD-like domain C1H56_04320 PF01043 SecA preprotein cross-linking domain C1H56_04320 PF02810 SEC-C motif C1H56_04320 PF07516 SecA Wing and Scaffold domain C1H56_04325 PF03548 Outer membrane lipoprotein carrier protein LolA C1H56_04330 PF16193 AAA C-terminal domain C1H56_04330 PF12002 MgsA AAA+ ATPase C terminal C1H56_04330 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_04335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1H56_04335 PF02403 Seryl-tRNA synthetase N-terminal domain C1H56_04340 PF00202 Aminotransferase class-III C1H56_04345 PF06968 Biotin and Thiamin Synthesis associated domain C1H56_04345 PF04055 Radical SAM superfamily C1H56_04350 PF00155 Aminotransferase class I and II C1H56_04355 PF08241 Methyltransferase domain C1H56_04370 PF01435 Peptidase family M48 C1H56_04380 PF00106 short chain dehydrogenase C1H56_04405 PF16036 Chalcone isomerase-like C1H56_04415 PF08328 Adenylosuccinate lyase C-terminal C1H56_04415 PF00206 Lyase C1H56_04420 PF04356 Protein of unknown function (DUF489) C1H56_04430 PF00294 pfkB family carbohydrate kinase C1H56_04435 PF00816 H-NS histone family C1H56_04440 PF03553 Na+/H+ antiporter family C1H56_04445 PF01634 ATP phosphoribosyltransferase C1H56_04445 PF08029 HisG, C-terminal domain C1H56_04450 PF00815 Histidinol dehydrogenase C1H56_04455 PF00155 Aminotransferase class I and II C1H56_04460 PF08645 Polynucleotide kinase 3 phosphatase C1H56_04460 PF00475 Imidazoleglycerol-phosphate dehydratase C1H56_04465 PF00117 Glutamine amidotransferase class-I C1H56_04470 PF00977 Histidine biosynthesis protein C1H56_04475 PF00977 Histidine biosynthesis protein C1H56_04480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C1H56_04480 PF01502 Phosphoribosyl-AMP cyclohydrolase C1H56_04485 PF00849 RNA pseudouridylate synthase C1H56_04490 PF03971 Monomeric isocitrate dehydrogenase C1H56_04495 PF00313 'Cold-shock' DNA-binding domain C1H56_04500 PF02617 ATP-dependent Clp protease adaptor protein ClpS C1H56_04505 PF10431 C-terminal, D2-small domain, of ClpB protein C1H56_04505 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_04505 PF07724 AAA domain (Cdc48 subfamily) C1H56_04505 PF17871 AAA lid domain C1H56_04505 PF02861 Clp amino terminal domain, pathogenicity island component C1H56_04510 PF02080 TrkA-C domain C1H56_04510 PF06826 Predicted Permease Membrane Region C1H56_04515 PF00462 Glutaredoxin C1H56_04520 PF00171 Aldehyde dehydrogenase family C1H56_04520 PF00465 Iron-containing alcohol dehydrogenase C1H56_04525 PF01418 Helix-turn-helix domain, rpiR family C1H56_04525 PF01380 SIS domain C1H56_04530 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1H56_04540 PF03956 Lysine exporter LysO C1H56_04550 PF04993 TfoX N-terminal domain C1H56_04550 PF04994 TfoX C-terminal domain C1H56_04565 PF00512 His Kinase A (phospho-acceptor) domain C1H56_04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_04565 PF00989 PAS fold C1H56_04575 PF00266 Aminotransferase class-V C1H56_04590 PF08443 RimK-like ATP-grasp domain C1H56_04590 PF18030 RimK PreATP-grasp domain C1H56_04595 PF08003 Protein of unknown function (DUF1698) C1H56_04600 PF13649 Methyltransferase domain C1H56_04605 PF01904 Protein of unknown function DUF72 C1H56_04610 PF01336 OB-fold nucleic acid binding domain C1H56_04610 PF02938 GAD domain C1H56_04610 PF00152 tRNA synthetases class II (D, K and N) C1H56_04615 PF00265 Thymidine kinase C1H56_04620 PF00375 Sodium:dicarboxylate symporter family C1H56_04625 PF00290 Tryptophan synthase alpha chain C1H56_04630 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_04635 PF00218 Indole-3-glycerol phosphate synthase C1H56_04635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1H56_04640 PF00591 Glycosyl transferase family, a/b domain C1H56_04640 PF02885 Glycosyl transferase family, helical bundle domain C1H56_04645 PF00117 Glutamine amidotransferase class-I C1H56_04650 PF04715 Anthranilate synthase component I, N terminal region C1H56_04650 PF00425 chorismate binding enzyme C1H56_04655 PF08056 Tryptophan operon leader peptide C1H56_04660 PF02811 PHP domain C1H56_04665 PF01300 Telomere recombination C1H56_04670 PF01479 S4 domain C1H56_04670 PF00849 RNA pseudouridylate synthase C1H56_04675 PF00005 ABC transporter C1H56_04675 PF00664 ABC transporter transmembrane region C1H56_04680 PF00664 ABC transporter transmembrane region C1H56_04680 PF00005 ABC transporter C1H56_04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_04695 PF00266 Aminotransferase class-V C1H56_04700 PF08448 PAS fold C1H56_04700 PF00990 Diguanylate cyclase, GGDEF domain C1H56_04705 PF02698 DUF218 domain C1H56_04715 PF03949 Malic enzyme, NAD binding domain C1H56_04715 PF00390 Malic enzyme, N-terminal domain C1H56_04725 PF01259 SAICAR synthetase C1H56_04745 PF00691 OmpA family C1H56_04745 PF13488 Glycine zipper C1H56_04760 PF13183 4Fe-4S dicluster domain C1H56_04760 PF01565 FAD binding domain C1H56_04760 PF02913 FAD linked oxidases, C-terminal domain C1H56_04765 PF04191 Phospholipid methyltransferase C1H56_04770 PF00089 Trypsin C1H56_04780 PF00221 Aromatic amino acid lyase C1H56_04785 PF17391 Urocanase N-terminal domain C1H56_04785 PF01175 Urocanase Rossmann-like domain C1H56_04785 PF17392 Urocanase C-terminal domain C1H56_04790 PF00491 Arginase family C1H56_04795 PF01979 Amidohydrolase family C1H56_04800 PF00392 Bacterial regulatory proteins, gntR family C1H56_04800 PF07702 UTRA domain C1H56_04810 PF04269 Protein of unknown function, DUF440 C1H56_04815 PF01132 Elongation factor P (EF-P) OB domain C1H56_04815 PF09285 Elongation factor P, C-terminal C1H56_04815 PF08207 Elongation factor P (EF-P) KOW-like domain C1H56_04825 PF13426 PAS domain C1H56_04825 PF00990 Diguanylate cyclase, GGDEF domain C1H56_04825 PF00563 EAL domain C1H56_04830 PF03104 DNA polymerase family B, exonuclease domain C1H56_04830 PF00136 DNA polymerase family B C1H56_04835 PF00196 Bacterial regulatory proteins, luxR family C1H56_04835 PF00072 Response regulator receiver domain C1H56_04840 PF01541 GIY-YIG catalytic domain C1H56_04840 PF02151 UvrB/uvrC motif C1H56_04840 PF08459 UvrC Helix-hairpin-helix N-terminal C1H56_04845 PF01066 CDP-alcohol phosphatidyltransferase C1H56_04870 PF00072 Response regulator receiver domain C1H56_04870 PF00990 Diguanylate cyclase, GGDEF domain C1H56_04880 PF01409 tRNA synthetases class II core domain (F) C1H56_04880 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1H56_04885 PF03147 Ferredoxin-fold anticodon binding domain C1H56_04885 PF03484 tRNA synthetase B5 domain C1H56_04885 PF01588 Putative tRNA binding domain C1H56_04885 PF03483 B3/4 domain C1H56_04885 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1H56_04890 PF00216 Bacterial DNA-binding protein C1H56_04905 PF05724 Thiopurine S-methyltransferase (TPMT) C1H56_04915 PF02222 ATP-grasp domain C1H56_04925 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C1H56_04925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1H56_04930 PF04172 LrgB-like family C1H56_04935 PF03788 LrgA family C1H56_04940 PF00929 Exonuclease C1H56_04940 PF08411 Exonuclease C-terminal C1H56_04950 PF01641 SelR domain C1H56_04960 PF02277 Phosphoribosyltransferase C1H56_04965 PF02654 Cobalamin-5-phosphate synthase C1H56_04970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1H56_04980 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C1H56_04985 PF01032 FecCD transport family C1H56_04990 PF00005 ABC transporter C1H56_05005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05005 PF17200 Single Cache domain 2 C1H56_05005 PF00672 HAMP domain C1H56_05020 PF00994 Probable molybdopterin binding domain C1H56_05035 PF00111 2Fe-2S iron-sulfur cluster binding domain C1H56_05035 PF00970 Oxidoreductase FAD-binding domain C1H56_05035 PF00175 Oxidoreductase NAD-binding domain C1H56_05040 PF00268 Ribonucleotide reductase, small chain C1H56_05045 PF00317 Ribonucleotide reductase, all-alpha domain C1H56_05045 PF02867 Ribonucleotide reductase, barrel domain C1H56_05045 PF03477 ATP cone domain C1H56_05055 PF03989 DNA gyrase C-terminal domain, beta-propeller C1H56_05055 PF00521 DNA gyrase/topoisomerase IV, subunit A C1H56_05070 PF07690 Major Facilitator Superfamily C1H56_05080 PF00925 GTP cyclohydrolase II C1H56_05105 PF03734 L,D-transpeptidase catalytic domain C1H56_05105 PF01471 Putative peptidoglycan binding domain C1H56_05110 PF05951 Bacterial protein of unknown function (DUF882) C1H56_05115 PF00753 Metallo-beta-lactamase superfamily C1H56_05130 PF03480 Bacterial extracellular solute-binding protein, family 7 C1H56_05140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1H56_05150 PF17200 Single Cache domain 2 C1H56_05150 PF07730 Histidine kinase C1H56_05155 PF00196 Bacterial regulatory proteins, luxR family C1H56_05155 PF00072 Response regulator receiver domain C1H56_05160 PF01047 MarR family C1H56_05165 PF02028 BCCT, betaine/carnitine/choline family transporter C1H56_05170 PF01522 Polysaccharide deacetylase C1H56_05175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1H56_05180 PF02378 Phosphotransferase system, EIIC C1H56_05185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C1H56_05190 PF11975 Family 4 glycosyl hydrolase C-terminal domain C1H56_05190 PF02056 Family 4 glycosyl hydrolase C1H56_05195 PF04794 YdjC-like protein C1H56_05200 PF00356 Bacterial regulatory proteins, lacI family C1H56_05205 PF13506 Glycosyl transferase family 21 C1H56_05210 PF04349 Periplasmic glucan biosynthesis protein, MdoG C1H56_05215 PF00672 HAMP domain C1H56_05215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05215 PF17200 Single Cache domain 2 C1H56_05230 PF00155 Aminotransferase class I and II C1H56_05245 PF08543 Phosphomethylpyrimidine kinase C1H56_05250 PF01336 OB-fold nucleic acid binding domain C1H56_05250 PF00152 tRNA synthetases class II (D, K and N) C1H56_05255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05255 PF00672 HAMP domain C1H56_05260 PF01242 6-pyruvoyl tetrahydropterin synthase C1H56_05265 PF03315 Serine dehydratase beta chain C1H56_05265 PF03313 Serine dehydratase alpha chain C1H56_05270 PF03222 Tryptophan/tyrosine permease family C1H56_05275 PF00293 NUDIX domain C1H56_05280 PF00425 chorismate binding enzyme C1H56_05280 PF04715 Anthranilate synthase component I, N terminal region C1H56_05295 PF04317 YcjX-like family, DUF463 C1H56_05300 PF05128 Domain of unknown function (DUF697) C1H56_05305 PF18024 Helix-turn-helix domain C1H56_05305 PF00158 Sigma-54 interaction domain C1H56_05310 PF13302 Acetyltransferase (GNAT) domain C1H56_05325 PF00892 EamA-like transporter family C1H56_05330 PF01168 Alanine racemase, N-terminal domain C1H56_05330 PF00842 Alanine racemase, C-terminal domain C1H56_05335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05335 PF00672 HAMP domain C1H56_05340 PF00939 Sodium:sulfate symporter transmembrane region C1H56_05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_05345 PF00512 His Kinase A (phospho-acceptor) domain C1H56_05345 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_05350 PF00072 Response regulator receiver domain C1H56_05350 PF02954 Bacterial regulatory protein, Fis family C1H56_05350 PF00158 Sigma-54 interaction domain C1H56_05355 PF04393 Protein of unknown function (DUF535) C1H56_05360 PF06629 MltA-interacting protein MipA C1H56_05365 PF00512 His Kinase A (phospho-acceptor) domain C1H56_05365 PF00672 HAMP domain C1H56_05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_05370 PF00072 Response regulator receiver domain C1H56_05370 PF00486 Transcriptional regulatory protein, C terminal C1H56_05395 PF13407 Periplasmic binding protein domain C1H56_05400 PF00005 ABC transporter C1H56_05405 PF02653 Branched-chain amino acid transport system / permease component C1H56_05420 PF01970 Tripartite tricarboxylate transporter TctA family C1H56_05435 PF07729 FCD domain C1H56_05435 PF00392 Bacterial regulatory proteins, gntR family C1H56_05445 PF00285 Citrate synthase, C-terminal domain C1H56_05450 PF00330 Aconitase family (aconitate hydratase) C1H56_05450 PF00694 Aconitase C-terminal domain C1H56_05455 PF04303 PrpF protein C1H56_05460 PF16177 Acetyl-coenzyme A synthetase N-terminus C1H56_05460 PF00501 AMP-binding enzyme C1H56_05460 PF13193 AMP-binding enzyme C-terminal domain C1H56_05480 PF01797 Transposase IS200 like C1H56_05485 PF07687 Peptidase dimerisation domain C1H56_05485 PF01546 Peptidase family M20/M25/M40 C1H56_05490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_05495 PF04209 homogentisate 1,2-dioxygenase C1H56_05505 PF02798 Glutathione S-transferase, N-terminal domain C1H56_05505 PF14497 Glutathione S-transferase, C-terminal domain C1H56_05510 PF00072 Response regulator receiver domain C1H56_05515 PF00672 HAMP domain C1H56_05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_05515 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C1H56_05515 PF00072 Response regulator receiver domain C1H56_05515 PF01627 Hpt domain C1H56_05515 PF00512 His Kinase A (phospho-acceptor) domain C1H56_05520 PF00462 Glutaredoxin C1H56_05520 PF08534 Redoxin C1H56_05530 PF00990 Diguanylate cyclase, GGDEF domain C1H56_05535 PF17785 PUA-like domain C1H56_05535 PF10672 S-adenosylmethionine-dependent methyltransferase C1H56_05540 PF00708 Acylphosphatase C1H56_05545 PF04358 DsrC like protein C1H56_05550 PF01027 Inhibitor of apoptosis-promoting Bax1 C1H56_05555 PF00005 ABC transporter C1H56_05560 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_05565 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_05570 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_05575 PF14824 Sirohaem biosynthesis protein central C1H56_05575 PF10414 Sirohaem synthase dimerisation region C1H56_05575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1H56_05585 PF04055 Radical SAM superfamily C1H56_05590 PF06508 Queuosine biosynthesis protein QueC C1H56_05610 PF03707 Bacterial signalling protein N terminal repeat C1H56_05610 PF00563 EAL domain C1H56_05610 PF00990 Diguanylate cyclase, GGDEF domain C1H56_05620 PF17158 Membrane-associated sensor, integral membrane domain C1H56_05620 PF00990 Diguanylate cyclase, GGDEF domain C1H56_05625 PF00012 Hsp70 protein C1H56_05630 PF00012 Hsp70 protein C1H56_05645 PF03707 Bacterial signalling protein N terminal repeat C1H56_05645 PF00563 EAL domain C1H56_05645 PF00990 Diguanylate cyclase, GGDEF domain C1H56_05665 PF11898 Domain of unknown function (DUF3418) C1H56_05665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1H56_05665 PF00271 Helicase conserved C-terminal domain C1H56_05665 PF04408 Helicase associated domain (HA2) C1H56_05665 PF00270 DEAD/DEAH box helicase C1H56_05675 PF00012 Hsp70 protein C1H56_05680 PF03099 Biotin/lipoate A/B protein ligase family C1H56_05680 PF10437 Bacterial lipoate protein ligase C-terminus C1H56_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_05690 PF03466 LysR substrate binding domain C1H56_05695 PF07690 Major Facilitator Superfamily C1H56_05700 PF03441 FAD binding domain of DNA photolyase C1H56_05700 PF00875 DNA photolyase C1H56_05705 PF00893 Small Multidrug Resistance protein C1H56_05710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05710 PF00672 HAMP domain C1H56_05725 PF01584 CheW-like domain C1H56_05725 PF02895 Signal transducing histidine kinase, homodimeric domain C1H56_05725 PF01627 Hpt domain C1H56_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_05725 PF07194 P2 response regulator binding domain C1H56_05730 PF01584 CheW-like domain C1H56_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_05730 PF01627 Hpt domain C1H56_05730 PF00072 Response regulator receiver domain C1H56_05735 PF01739 CheR methyltransferase, SAM binding domain C1H56_05735 PF03705 CheR methyltransferase, all-alpha domain C1H56_05745 PF00072 Response regulator receiver domain C1H56_05745 PF01339 CheB methylesterase C1H56_05750 PF01584 CheW-like domain C1H56_05755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05755 PF17202 Single cache domain 3 C1H56_05755 PF00672 HAMP domain C1H56_05760 PF12729 Four helix bundle sensory module for signal transduction C1H56_05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05760 PF00672 HAMP domain C1H56_05765 PF13426 PAS domain C1H56_05765 PF08447 PAS fold C1H56_05765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05770 PF00271 Helicase conserved C-terminal domain C1H56_05770 PF00270 DEAD/DEAH box helicase C1H56_05780 PF02321 Outer membrane efflux protein C1H56_05785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_05785 PF00529 HlyD membrane-fusion protein of T1SS C1H56_05790 PF07690 Major Facilitator Superfamily C1H56_05795 PF02743 Cache domain C1H56_05795 PF00672 HAMP domain C1H56_05795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_05800 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C1H56_05805 PF05638 Type VI secretion system effector, Hcp C1H56_05810 PF04717 Type VI secretion system, phage-baseplate injector C1H56_05810 PF16671 Actin cross-linking domain C1H56_05835 PF01810 LysE type translocator C1H56_05840 PF01235 Sodium:alanine symporter family C1H56_05855 PF13416 Bacterial extracellular solute-binding protein C1H56_05860 PF13416 Bacterial extracellular solute-binding protein C1H56_05865 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_05870 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_05875 PF00005 ABC transporter C1H56_05875 PF08402 TOBE domain C1H56_05895 PF01171 PP-loop family C1H56_05900 PF00582 Universal stress protein family C1H56_05905 PF00027 Cyclic nucleotide-binding domain C1H56_05905 PF13545 Crp-like helix-turn-helix domain C1H56_05920 PF00403 Heavy-metal-associated domain C1H56_05930 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1H56_05930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1H56_05945 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1H56_05960 PF00072 Response regulator receiver domain C1H56_05960 PF00512 His Kinase A (phospho-acceptor) domain C1H56_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_05960 PF09308 LuxQ, periplasmic C1H56_05965 PF03412 Peptidase C39 family C1H56_05965 PF00664 ABC transporter transmembrane region C1H56_05965 PF00005 ABC transporter C1H56_05975 PF03412 Peptidase C39 family C1H56_05975 PF00005 ABC transporter C1H56_05975 PF00664 ABC transporter transmembrane region C1H56_05985 PF02794 RTX toxin acyltransferase family C1H56_05990 PF12146 Serine aminopeptidase, S33 C1H56_05990 PF11647 Membrane Localization Domain C1H56_05990 PF11713 Peptidase C80 family C1H56_05990 PF07634 RtxA repeat C1H56_05990 PF16671 Actin cross-linking domain C1H56_06010 PF01381 Helix-turn-helix C1H56_06020 PF01376 Heat-labile enterotoxin beta chain C1H56_06025 PF01375 Heat-labile enterotoxin alpha chain C1H56_06030 PF05707 Zonular occludens toxin (Zot) C1H56_06035 PF10734 Protein of unknown function (DUF2523) C1H56_06040 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII C1H56_06060 PF01381 Helix-turn-helix C1H56_06155 PF06303 MatP N-terminal domain C1H56_06155 PF17414 MatP C-terminal ribbon-helix-helix domain C1H56_06160 PF13654 AAA domain C1H56_06160 PF05362 Lon protease (S16) C-terminal proteolytic domain C1H56_06165 PF07977 FabA-like domain C1H56_06170 PF04957 Ribosome modulation factor C1H56_06190 PF02926 THUMP domain C1H56_06190 PF10672 S-adenosylmethionine-dependent methyltransferase C1H56_06190 PF01170 Putative RNA methylase family UPF0020 C1H56_06195 PF07126 Cell-division protein ZapC C1H56_06200 PF01180 Dihydroorotate dehydrogenase C1H56_06205 PF05088 Bacterial NAD-glutamate dehydrogenase C1H56_06215 PF11940 Domain of unknown function (DUF3458) Ig-like fold C1H56_06215 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C1H56_06215 PF01433 Peptidase family M1 domain C1H56_06250 PF13186 Iron-sulfur cluster-binding domain C1H56_06250 PF04055 Radical SAM superfamily C1H56_06330 PF04860 Phage portal protein C1H56_06420 PF01712 Deoxynucleoside kinase C1H56_06490 PF07508 Recombinase C1H56_06490 PF00239 Resolvase, N terminal domain C1H56_06490 PF13408 Recombinase zinc beta ribbon domain C1H56_06495 PF11940 Domain of unknown function (DUF3458) Ig-like fold C1H56_06495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C1H56_06495 PF01433 Peptidase family M1 domain C1H56_06505 PF00595 PDZ domain C1H56_06505 PF11818 C-terminal domain of tail specific protease (DUF3340) C1H56_06505 PF03572 Peptidase family S41 C1H56_06505 PF17804 Tail specific protease N-terminal domain C1H56_06510 PF04352 ProQ/FINO family C1H56_06510 PF17516 ProQ C-terminal domain C1H56_06515 PF13185 GAF domain C1H56_06520 PF00664 ABC transporter transmembrane region C1H56_06520 PF00005 ABC transporter C1H56_06525 PF04403 Paraquat-inducible protein A C1H56_06530 PF02470 MlaD protein C1H56_06535 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1H56_06535 PF01189 16S rRNA methyltransferase RsmB/F C1H56_06535 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1H56_06540 PF17783 CvfB-like winged helix domain C1H56_06540 PF13509 S1 domain C1H56_06555 PF00793 DAHP synthetase I family C1H56_06560 PF04461 Protein of unknown function (DUF520) C1H56_06565 PF02146 Sir2 family C1H56_06580 PF13247 4Fe-4S dicluster domain C1H56_06585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1H56_06585 PF01568 Molydopterin dinucleotide binding domain C1H56_06585 PF00384 Molybdopterin oxidoreductase C1H56_06595 PF02613 Nitrate reductase delta subunit C1H56_06615 PF02634 FdhD/NarQ family C1H56_06620 PF12848 ABC transporter C1H56_06620 PF00005 ABC transporter C1H56_06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_06625 PF00512 His Kinase A (phospho-acceptor) domain C1H56_06625 PF00989 PAS fold C1H56_06630 PF00158 Sigma-54 interaction domain C1H56_06630 PF00072 Response regulator receiver domain C1H56_06630 PF02954 Bacterial regulatory protein, Fis family C1H56_06635 PF12849 PBP superfamily domain C1H56_06640 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_06645 PF00005 ABC transporter C1H56_06645 PF08402 TOBE domain C1H56_06650 PF12804 MobA-like NTP transferase domain C1H56_06655 PF03454 MoeA C-terminal region (domain IV) C1H56_06655 PF03453 MoeA N-terminal region (domain I and II) C1H56_06655 PF00994 Probable molybdopterin binding domain C1H56_06685 PF00480 ROK family C1H56_06700 PF02743 Cache domain C1H56_06700 PF00672 HAMP domain C1H56_06700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_06705 PF00877 NlpC/P60 family C1H56_06725 PF01554 MatE C1H56_06735 PF01068 ATP dependent DNA ligase domain C1H56_06735 PF14743 DNA ligase OB-like domain C1H56_06750 PF03544 Gram-negative bacterial TonB protein C-terminal C1H56_06755 PF02472 Biopolymer transport protein ExbD/TolR C1H56_06760 PF01618 MotA/TolQ/ExbB proton channel family C1H56_06765 PF01618 MotA/TolQ/ExbB proton channel family C1H56_06775 PF13416 Bacterial extracellular solute-binding protein C1H56_06780 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_06785 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_06790 PF00005 ABC transporter C1H56_06790 PF17912 MalK OB fold domain C1H56_06795 PF00455 DeoR C terminal sensor domain C1H56_06795 PF08220 DeoR-like helix-turn-helix domain C1H56_06800 PF03009 Glycerophosphoryl diester phosphodiesterase family C1H56_06805 PF04074 YhcH/YjgK/YiaL C1H56_06810 PF01042 Endoribonuclease L-PSP C1H56_06815 PF00356 Bacterial regulatory proteins, lacI family C1H56_06820 PF00232 Glycosyl hydrolase family 1 C1H56_06825 PF00141 Peroxidase C1H56_06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_06830 PF03466 LysR substrate binding domain C1H56_06840 PF00529 HlyD membrane-fusion protein of T1SS C1H56_06850 PF00005 ABC transporter C1H56_06850 PF12704 MacB-like periplasmic core domain C1H56_06850 PF02687 FtsX-like permease family C1H56_06855 PF12704 MacB-like periplasmic core domain C1H56_06855 PF00005 ABC transporter C1H56_06855 PF02687 FtsX-like permease family C1H56_06860 PF00005 ABC transporter C1H56_06860 PF12704 MacB-like periplasmic core domain C1H56_06860 PF02687 FtsX-like permease family C1H56_06865 PF02322 Cytochrome bd terminal oxidase subunit II C1H56_06870 PF01654 Cytochrome bd terminal oxidase subunit I C1H56_06885 PF00206 Lyase C1H56_06885 PF10415 Fumarase C C-terminus C1H56_06915 PF00501 AMP-binding enzyme C1H56_06915 PF13193 AMP-binding enzyme C-terminal domain C1H56_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_06920 PF03466 LysR substrate binding domain C1H56_06925 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1H56_06925 PF00361 Proton-conducting membrane transporter C1H56_06930 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) C1H56_06935 PF00080 Copper/zinc superoxide dismutase (SODC) C1H56_06945 PF06628 Catalase-related immune-responsive C1H56_06945 PF00199 Catalase C1H56_06955 PF03466 LysR substrate binding domain C1H56_06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_06960 PF03306 Alpha-acetolactate decarboxylase C1H56_06965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1H56_06965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1H56_06965 PF00205 Thiamine pyrophosphate enzyme, central domain C1H56_06975 PF00563 EAL domain C1H56_06975 PF17154 Gammaproteobacterial periplasmic sensor domain C1H56_06975 PF00990 Diguanylate cyclase, GGDEF domain C1H56_06975 PF00672 HAMP domain C1H56_06980 PF00990 Diguanylate cyclase, GGDEF domain C1H56_06985 PF01263 Aldose 1-epimerase C1H56_06990 PF10509 Galactokinase galactose-binding signature C1H56_06990 PF08544 GHMP kinases C terminal C1H56_06990 PF00288 GHMP kinases N terminal domain C1H56_06995 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C1H56_06995 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C1H56_07000 PF07690 Major Facilitator Superfamily C1H56_07020 PF00072 Response regulator receiver domain C1H56_07020 PF00990 Diguanylate cyclase, GGDEF domain C1H56_07040 PF00072 Response regulator receiver domain C1H56_07040 PF01584 CheW-like domain C1H56_07050 PF12431 Transcriptional regulator C1H56_07050 PF00072 Response regulator receiver domain C1H56_07055 PF17203 Single cache domain 3 C1H56_07055 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C1H56_07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_07055 PF00989 PAS fold C1H56_07070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_07090 PF04204 Homoserine O-succinyltransferase C1H56_07105 PF05971 RNA methyltransferase C1H56_07110 PF01863 Protein of unknown function DUF45 C1H56_07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_07120 PF03466 LysR substrate binding domain C1H56_07140 PF02321 Outer membrane efflux protein C1H56_07145 PF05736 OprF membrane domain C1H56_07145 PF00691 OmpA family C1H56_07155 PF16653 Saccharopine dehydrogenase C-terminal domain C1H56_07155 PF03435 Saccharopine dehydrogenase NADP binding domain C1H56_07160 PF00202 Aminotransferase class-III C1H56_07170 PF06965 Na+/H+ antiporter 1 C1H56_07185 PF00005 ABC transporter C1H56_07190 PF01554 MatE C1H56_07195 PF13460 NAD(P)H-binding C1H56_07195 PF11066 Protein of unknown function (DUF2867) C1H56_07205 PF07690 Major Facilitator Superfamily C1H56_07210 PF01479 S4 domain C1H56_07210 PF00849 RNA pseudouridylate synthase C1H56_07215 PF00271 Helicase conserved C-terminal domain C1H56_07215 PF04851 Type III restriction enzyme, res subunit C1H56_07225 PF00072 Response regulator receiver domain C1H56_07225 PF00486 Transcriptional regulatory protein, C terminal C1H56_07235 PF01386 Ribosomal L25p family C1H56_07240 PF01590 GAF domain C1H56_07240 PF00563 EAL domain C1H56_07240 PF00360 Phytochrome region C1H56_07240 PF00990 Diguanylate cyclase, GGDEF domain C1H56_07255 PF12729 Four helix bundle sensory module for signal transduction C1H56_07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_07255 PF00672 HAMP domain C1H56_07275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_07275 PF12793 Sugar transport-related sRNA regulator N-term C1H56_07285 PF08453 Peptidase family M9 N-terminal C1H56_07285 PF04151 Bacterial pre-peptidase C-terminal domain C1H56_07285 PF01752 Collagenase C1H56_07295 PF00990 Diguanylate cyclase, GGDEF domain C1H56_07295 PF00563 EAL domain C1H56_07295 PF03707 Bacterial signalling protein N terminal repeat C1H56_07300 PF09308 LuxQ, periplasmic C1H56_07300 PF00512 His Kinase A (phospho-acceptor) domain C1H56_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_07300 PF00072 Response regulator receiver domain C1H56_07305 PF03448 MgtE intracellular N domain C1H56_07305 PF00571 CBS domain C1H56_07305 PF01769 Divalent cation transporter C1H56_07315 PF03222 Tryptophan/tyrosine permease family C1H56_07320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_07325 PF00005 ABC transporter C1H56_07340 PF06945 Protein of unknown function (DUF1289) C1H56_07350 PF13416 Bacterial extracellular solute-binding protein C1H56_07355 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_07360 PF00005 ABC transporter C1H56_07365 PF01066 CDP-alcohol phosphatidyltransferase C1H56_07370 PF00849 RNA pseudouridylate synthase C1H56_07375 PF00209 Sodium:neurotransmitter symporter family C1H56_07385 PF13396 Phospholipase_D-nuclease N-terminal C1H56_07385 PF13091 PLD-like domain C1H56_07390 PF01053 Cys/Met metabolism PLP-dependent enzyme C1H56_07395 PF03352 Methyladenine glycosylase C1H56_07400 PF00873 AcrB/AcrD/AcrF family C1H56_07405 PF13533 Biotin-lipoyl like C1H56_07410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_07410 PF00529 HlyD membrane-fusion protein of T1SS C1H56_07425 PF04012 PspA/IM30 family C1H56_07430 PF00158 Sigma-54 interaction domain C1H56_07430 PF02954 Bacterial regulatory protein, Fis family C1H56_07435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_07440 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_07445 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_07445 PF12911 N-terminal TM domain of oligopeptide transport permease C C1H56_07450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_07450 PF00005 ABC transporter C1H56_07455 PF00005 ABC transporter C1H56_07470 PF01368 DHH family C1H56_07470 PF02833 DHHA2 domain C1H56_07495 PF00384 Molybdopterin oxidoreductase C1H56_07495 PF01568 Molydopterin dinucleotide binding domain C1H56_07495 PF18364 Molybdopterin oxidoreductase N-terminal domain C1H56_07500 PF03264 NapC/NirT cytochrome c family, N-terminal region C1H56_07505 PF06796 Periplasmic nitrate reductase protein NapE C1H56_07515 PF01226 Formate/nitrite transporter C1H56_07530 PF01370 NAD dependent epimerase/dehydratase family C1H56_07535 PF02698 DUF218 domain C1H56_07545 PF04279 Intracellular septation protein A C1H56_07550 PF03061 Thioesterase superfamily C1H56_07555 PF03795 YCII-related domain C1H56_07565 PF08267 Cobalamin-independent synthase, N-terminal domain C1H56_07565 PF01717 Cobalamin-independent synthase, Catalytic domain C1H56_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_07570 PF03466 LysR substrate binding domain C1H56_07585 PF05193 Peptidase M16 inactive domain C1H56_07585 PF00675 Insulinase (Peptidase family M16) C1H56_07590 PF00563 EAL domain C1H56_07590 PF00990 Diguanylate cyclase, GGDEF domain C1H56_07590 PF03707 Bacterial signalling protein N terminal repeat C1H56_07595 PF08497 Radical SAM N-terminal C1H56_07595 PF11842 Domain of unknown function (DUF3362) C1H56_07595 PF04055 Radical SAM superfamily C1H56_07600 PF01810 LysE type translocator C1H56_07605 PF01037 Lrp/AsnC ligand binding domain C1H56_07610 PF16330 MukB hinge domain C1H56_07610 PF04310 MukB N-terminal C1H56_07615 PF04288 MukE-like family C1H56_07620 PF03882 MukF winged-helix domain C1H56_07620 PF17193 MukF C-terminal domain C1H56_07620 PF17192 MukF middle domain C1H56_07630 PF02698 DUF218 domain C1H56_07635 PF00486 Transcriptional regulatory protein, C terminal C1H56_07635 PF00072 Response regulator receiver domain C1H56_07640 PF02613 Nitrate reductase delta subunit C1H56_07650 PF00356 Bacterial regulatory proteins, lacI family C1H56_07655 PF04993 TfoX N-terminal domain C1H56_07655 PF04994 TfoX C-terminal domain C1H56_07675 PF00534 Glycosyl transferases group 1 C1H56_07675 PF08323 Starch synthase catalytic domain C1H56_07680 PF00483 Nucleotidyl transferase C1H56_07685 PF08272 Topoisomerase I zinc-ribbon-like C1H56_07685 PF01751 Toprim domain C1H56_07685 PF01131 DNA topoisomerase C1H56_07685 PF01396 Topoisomerase DNA binding C4 zinc finger C1H56_07690 PF10692 Protein of unknown function (DUF2498) C1H56_07695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1H56_07705 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1H56_07710 PF04376 Arginine-tRNA-protein transferase, N terminus C1H56_07710 PF04377 Arginine-tRNA-protein transferase, C terminus C1H56_07715 PF01176 Translation initiation factor 1A / IF-1 C1H56_07725 PF12241 Trans-2-enoyl-CoA reductase catalytic region C1H56_07725 PF07055 Enoyl reductase FAD binding domain C1H56_07725 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C1H56_07730 PF09317 Domain of unknown function (DUF1974) C1H56_07730 PF02770 Acyl-CoA dehydrogenase, middle domain C1H56_07730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1H56_07730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1H56_07735 PF16295 Tetracyclin repressor-like, C-terminal domain C1H56_07735 PF00440 Bacterial regulatory proteins, tetR family C1H56_07745 PF07383 Protein of unknown function (DUF1496) C1H56_07750 PF00171 Aldehyde dehydrogenase family C1H56_07755 PF00440 Bacterial regulatory proteins, tetR family C1H56_07755 PF08362 YcdC-like protein, C-terminal region C1H56_07780 PF05552 Conserved TM helix C1H56_07780 PF00924 Mechanosensitive ion channel C1H56_07785 PF04403 Paraquat-inducible protein A C1H56_07790 PF02470 MlaD protein C1H56_07800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_07805 PF00873 AcrB/AcrD/AcrF family C1H56_07815 PF13356 Arm DNA-binding domain C1H56_07815 PF00589 Phage integrase family C1H56_07820 PF00589 Phage integrase family C1H56_07820 PF13356 Arm DNA-binding domain C1H56_07825 PF12419 SNF2 Helicase protein C1H56_07825 PF00271 Helicase conserved C-terminal domain C1H56_07825 PF00176 SNF2 family N-terminal domain C1H56_07845 PF11867 Domain of unknown function (DUF3387) C1H56_07845 PF18766 SWI2/SNF2 ATPase C1H56_07845 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1H56_07865 PF02384 N-6 DNA Methylase C1H56_07885 PF07646 Kelch motif C1H56_07890 PF01344 Kelch motif C1H56_07895 PF01380 SIS domain C1H56_07895 PF01418 Helix-turn-helix domain, rpiR family C1H56_07900 PF00701 Dihydrodipicolinate synthetase family C1H56_07905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1H56_07910 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C1H56_07915 PF03480 Bacterial extracellular solute-binding protein, family 7 C1H56_07925 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase C1H56_07930 PF00480 ROK family C1H56_07935 PF01979 Amidohydrolase family C1H56_07940 PF09264 Vibrio cholerae sialidase, lectin insertion C1H56_07940 PF13088 BNR repeat-like domain C1H56_07950 PF04002 RadC-like JAB domain C1H56_08010 PF00005 ABC transporter C1H56_08090 PF03441 FAD binding domain of DNA photolyase C1H56_08090 PF00875 DNA photolyase C1H56_08100 PF09905 DNA-binding protein VF530 C1H56_08105 PF00158 Sigma-54 interaction domain C1H56_08105 PF02954 Bacterial regulatory protein, Fis family C1H56_08105 PF01590 GAF domain C1H56_08110 PF00171 Aldehyde dehydrogenase family C1H56_08130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1H56_08140 PF12833 Helix-turn-helix domain C1H56_08145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1H56_08145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1H56_08145 PF02378 Phosphotransferase system, EIIC C1H56_08150 PF01238 Phosphomannose isomerase type I C1H56_08155 PF06610 L-alanine exporter C1H56_08160 PF00072 Response regulator receiver domain C1H56_08160 PF09308 LuxQ, periplasmic C1H56_08160 PF00512 His Kinase A (phospho-acceptor) domain C1H56_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_08170 PF02445 Quinolinate synthetase A protein C1H56_08180 PF00691 OmpA family C1H56_08185 PF04052 TolB amino-terminal domain C1H56_08185 PF07676 WD40-like Beta Propeller Repeat C1H56_08195 PF02472 Biopolymer transport protein ExbD/TolR C1H56_08200 PF01618 MotA/TolQ/ExbB proton channel family C1H56_08205 PF03061 Thioesterase superfamily C1H56_08210 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) C1H56_08215 PF08173 Membrane bound YbgT-like protein C1H56_08220 PF02322 Cytochrome bd terminal oxidase subunit II C1H56_08225 PF01654 Cytochrome bd terminal oxidase subunit I C1H56_08230 PF17864 RuvB AAA lid domain C1H56_08230 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1H56_08230 PF05491 RuvB C-terminal winged helix domain C1H56_08235 PF07499 RuvA, C-terminal domain C1H56_08235 PF01330 RuvA N terminal domain C1H56_08240 PF02075 Crossover junction endodeoxyribonuclease RuvC C1H56_08245 PF01406 tRNA synthetases class I (C) catalytic domain C1H56_08245 PF09190 DALR domain C1H56_08250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1H56_08255 PF00149 Calcineurin-like phosphoesterase C1H56_08260 PF08668 HDOD domain C1H56_08260 PF00563 EAL domain C1H56_08265 PF02810 SEC-C motif C1H56_08270 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C1H56_08275 PF13609 Gram-negative porin C1H56_08280 PF06733 DEAD_2 C1H56_08280 PF13307 Helicase C-terminal domain C1H56_08285 PF01925 Sulfite exporter TauE/SafE C1H56_08290 PF07445 Primosomal replication protein priC C1H56_08295 PF10689 Protein of unknown function (DUF2496) C1H56_08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_08300 PF00672 HAMP domain C1H56_08305 PF03372 Endonuclease/Exonuclease/phosphatase family C1H56_08310 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_08315 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_08320 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_08325 PF00005 ABC transporter C1H56_08340 PF02901 Pyruvate formate lyase-like C1H56_08340 PF01228 Glycine radical C1H56_08350 PF02743 Cache domain C1H56_08350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_08350 PF00672 HAMP domain C1H56_08355 PF04055 Radical SAM superfamily C1H56_08365 PF03887 YfbU domain C1H56_08370 PF08298 PrkA AAA domain C1H56_08370 PF06798 PrkA serine protein kinase C-terminal domain C1H56_08375 PF04285 Protein of unknown function (DUF444) C1H56_08380 PF04293 SpoVR like protein C1H56_08385 PF02348 Cytidylyltransferase C1H56_08390 PF03966 Trm112p-like protein C1H56_08395 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1H56_08400 PF00005 ABC transporter C1H56_08400 PF00664 ABC transporter transmembrane region C1H56_08405 PF13567 Domain of unknown function (DUF4131) C1H56_08405 PF03772 Competence protein C1H56_08405 PF00753 Metallo-beta-lactamase superfamily C1H56_08415 PF02687 FtsX-like permease family C1H56_08415 PF12704 MacB-like periplasmic core domain C1H56_08420 PF00005 ABC transporter C1H56_08425 PF12704 MacB-like periplasmic core domain C1H56_08425 PF02687 FtsX-like permease family C1H56_08435 PF00271 Helicase conserved C-terminal domain C1H56_08435 PF00270 DEAD/DEAH box helicase C1H56_08435 PF02559 CarD-like/TRCF domain C1H56_08435 PF17757 UvrB interaction domain C1H56_08435 PF03461 TRCF domain C1H56_08445 PF07968 Leukocidin/Hemolysin toxin family C1H56_08445 PF12563 Hemolytic toxin N terminal C1H56_08445 PF16458 Beta-prism lectin C1H56_08455 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_08460 PF05728 Uncharacterised protein family (UPF0227) C1H56_08470 PF08139 Prokaryotic membrane lipoprotein lipid attachment site C1H56_08470 PF13036 Peptidoglycan-synthase activator LpoB C1H56_08485 PF01230 HIT domain C1H56_08490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_08490 PF00672 HAMP domain C1H56_08500 PF00392 Bacterial regulatory proteins, gntR family C1H56_08500 PF07840 FadR C-terminal domain C1H56_08505 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C1H56_08510 PF02600 Disulfide bond formation protein DsbB C1H56_08515 PF01580 FtsK/SpoIIIE family C1H56_08515 PF09397 Ftsk gamma domain C1H56_08515 PF17854 FtsK alpha domain C1H56_08515 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1H56_08520 PF01037 Lrp/AsnC ligand binding domain C1H56_08525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1H56_08525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1H56_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_08535 PF03466 LysR substrate binding domain C1H56_08545 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C1H56_08550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1H56_08555 PF18073 Rubredoxin metal binding domain C1H56_08560 PF06305 Lipopolysaccharide assembly protein A domain C1H56_08565 PF00216 Bacterial DNA-binding protein C1H56_08570 PF00575 S1 RNA binding domain C1H56_08575 PF02224 Cytidylate kinase C1H56_08585 PF13145 PPIC-type PPIASE domain C1H56_08590 PF00216 Bacterial DNA-binding protein C1H56_08595 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_08595 PF05362 Lon protease (S16) C-terminal proteolytic domain C1H56_08595 PF02190 ATP-dependent protease La (LON) substrate-binding domain C1H56_08600 PF06689 ClpX C4-type zinc finger C1H56_08600 PF10431 C-terminal, D2-small domain, of ClpB protein C1H56_08600 PF07724 AAA domain (Cdc48 subfamily) C1H56_08605 PF00574 Clp protease C1H56_08610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1H56_08610 PF05698 Bacterial trigger factor protein (TF) C-terminus C1H56_08610 PF05697 Bacterial trigger factor protein (TF) C1H56_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_08620 PF02743 Cache domain C1H56_08620 PF00512 His Kinase A (phospho-acceptor) domain C1H56_08625 PF02954 Bacterial regulatory protein, Fis family C1H56_08625 PF00072 Response regulator receiver domain C1H56_08625 PF00158 Sigma-54 interaction domain C1H56_08630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1H56_08635 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C1H56_08640 PF03480 Bacterial extracellular solute-binding protein, family 7 C1H56_08645 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C1H56_08660 PF13188 PAS domain C1H56_08660 PF00563 EAL domain C1H56_08660 PF00990 Diguanylate cyclase, GGDEF domain C1H56_08660 PF03707 Bacterial signalling protein N terminal repeat C1H56_08710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1H56_08710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1H56_08715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C1H56_08720 PF01494 FAD binding domain C1H56_08725 PF03466 LysR substrate binding domain C1H56_08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_08740 PF01568 Molydopterin dinucleotide binding domain C1H56_08740 PF18364 Molybdopterin oxidoreductase N-terminal domain C1H56_08740 PF00384 Molybdopterin oxidoreductase C1H56_08745 PF03264 NapC/NirT cytochrome c family, N-terminal region C1H56_08750 PF00704 Glycosyl hydrolases family 18 C1H56_08755 PF01773 Na+ dependent nucleoside transporter N-terminus C1H56_08755 PF07670 Nucleoside recognition C1H56_08755 PF07662 Na+ dependent nucleoside transporter C-terminus C1H56_08760 PF03466 LysR substrate binding domain C1H56_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_08765 PF13406 Transglycosylase SLT domain C1H56_08770 PF05166 YcgL domain C1H56_08775 PF05209 Septum formation inhibitor MinC, N-terminal domain C1H56_08775 PF03775 Septum formation inhibitor MinC, C-terminal domain C1H56_08780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1H56_08785 PF03776 Septum formation topological specificity factor MinE C1H56_08790 PF04170 NlpE N-terminal domain C1H56_08810 PF07690 Major Facilitator Superfamily C1H56_08815 PF00672 HAMP domain C1H56_08815 PF12729 Four helix bundle sensory module for signal transduction C1H56_08815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_08820 PF01381 Helix-turn-helix C1H56_08820 PF07883 Cupin domain C1H56_08825 PF03594 Benzoate membrane transport protein C1H56_08830 PF00501 AMP-binding enzyme C1H56_08830 PF13193 AMP-binding enzyme C-terminal domain C1H56_08835 PF13378 Enolase C-terminal domain-like C1H56_08840 PF00378 Enoyl-CoA hydratase/isomerase C1H56_08845 PF12697 Alpha/beta hydrolase family C1H56_08850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1H56_08850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1H56_08850 PF16582 Middle domain of thiamine pyrophosphate C1H56_08855 PF00425 chorismate binding enzyme C1H56_08860 PF00155 Aminotransferase class I and II C1H56_08870 PF01966 HD domain C1H56_08870 PF13286 Phosphohydrolase-associated domain C1H56_08890 PF00570 HRDC domain C1H56_08890 PF01612 3'-5' exonuclease C1H56_08895 PF00501 AMP-binding enzyme C1H56_08895 PF13193 AMP-binding enzyme C-terminal domain C1H56_08900 PF00561 alpha/beta hydrolase fold C1H56_08915 PF00814 Glycoprotease family C1H56_08920 PF04851 Type III restriction enzyme, res subunit C1H56_08920 PF13307 Helicase C-terminal domain C1H56_08935 PF01842 ACT domain C1H56_08935 PF00551 Formyl transferase C1H56_08940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1H56_08940 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_08945 PF01343 Peptidase family S49 C1H56_08950 PF00710 Asparaginase, N-terminal C1H56_08950 PF17763 Glutaminase/Asparaginase C-terminal domain C1H56_08955 PF07023 Protein of unknown function (DUF1315) C1H56_08965 PF01641 SelR domain C1H56_08970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1H56_08970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1H56_08975 PF01263 Aldose 1-epimerase C1H56_08995 PF13847 Methyltransferase domain C1H56_09010 PF01584 CheW-like domain C1H56_09010 PF00072 Response regulator receiver domain C1H56_09015 PF00480 ROK family C1H56_09020 PF00224 Pyruvate kinase, barrel domain C1H56_09020 PF02887 Pyruvate kinase, alpha/beta domain C1H56_09025 PF01734 Patatin-like phospholipase C1H56_09040 PF00209 Sodium:neurotransmitter symporter family C1H56_09045 PF02378 Phosphotransferase system, EIIC C1H56_09045 PF00367 phosphotransferase system, EIIB C1H56_09050 PF01026 TatD related DNase C1H56_09055 PF09115 DNA polymerase III, delta subunit, C terminal C1H56_09060 PF02223 Thymidylate kinase C1H56_09065 PF02618 YceG-like family C1H56_09070 PF01063 Amino-transferase class IV C1H56_09075 PF02801 Beta-ketoacyl synthase, C-terminal domain C1H56_09075 PF00109 Beta-ketoacyl synthase, N-terminal domain C1H56_09080 PF00550 Phosphopantetheine attachment site C1H56_09090 PF00698 Acyl transferase domain C1H56_09095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1H56_09095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1H56_09100 PF02504 Fatty acid synthesis protein C1H56_09105 PF01783 Ribosomal L32p protein family C1H56_09110 PF02620 Large ribosomal RNA subunit accumulation protein YceD C1H56_09115 PF02545 Maf-like protein C1H56_09120 PF00849 RNA pseudouridylate synthase C1H56_09120 PF01479 S4 domain C1H56_09135 PF12111 Polyribonucleotide phosphorylase C terminal C1H56_09135 PF10150 Ribonuclease E/G family C1H56_09135 PF00575 S1 RNA binding domain C1H56_09140 PF01740 STAS domain C1H56_09140 PF00916 Sulfate permease family C1H56_09155 PF00171 Aldehyde dehydrogenase family C1H56_09155 PF00465 Iron-containing alcohol dehydrogenase C1H56_09160 PF01914 MarC family integral membrane protein C1H56_09165 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1H56_09165 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1H56_09170 PF03553 Na+/H+ antiporter family C1H56_09180 PF04245 37-kD nucleoid-associated bacterial protein C1H56_09185 PF07208 Protein of unknown function (DUF1414) C1H56_09190 PF00884 Sulfatase C1H56_09190 PF11893 Domain of unknown function (DUF3413) C1H56_09205 PF00850 Histone deacetylase domain C1H56_09210 PF01751 Toprim domain C1H56_09210 PF01131 DNA topoisomerase C1H56_09215 PF00462 Glutaredoxin C1H56_09220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1H56_09220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1H56_09235 PF04333 MlaA lipoprotein C1H56_09245 PF03918 Cytochrome C biogenesis protein C1H56_09250 PF08534 Redoxin C1H56_09255 PF01578 Cytochrome C assembly protein C1H56_09255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C1H56_09260 PF03100 CcmE C1H56_09265 PF04995 Heme exporter protein D (CcmD) C1H56_09270 PF01578 Cytochrome C assembly protein C1H56_09275 PF03379 CcmB protein C1H56_09280 PF00005 ABC transporter C1H56_09290 PF01584 CheW-like domain C1H56_09300 PF13614 AAA domain C1H56_09305 PF01339 CheB methylesterase C1H56_09305 PF00072 Response regulator receiver domain C1H56_09310 PF02895 Signal transducing histidine kinase, homodimeric domain C1H56_09310 PF01584 CheW-like domain C1H56_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_09310 PF01627 Hpt domain C1H56_09310 PF07194 P2 response regulator binding domain C1H56_09315 PF04344 Chemotaxis phosphatase, CheZ C1H56_09320 PF00072 Response regulator receiver domain C1H56_09325 PF04542 Sigma-70 region 2 C1H56_09325 PF04545 Sigma-70, region 4 C1H56_09325 PF04539 Sigma-70 region 3 C1H56_09330 PF10609 NUBPL iron-transfer P-loop NTPase C1H56_09335 PF00448 SRP54-type protein, GTPase domain C1H56_09340 PF00771 FHIPEP family C1H56_09345 PF00300 Histidine phosphatase superfamily (branch 1) C1H56_09350 PF05193 Peptidase M16 inactive domain C1H56_09350 PF00675 Insulinase (Peptidase family M16) C1H56_09360 PF00750 tRNA synthetases class I (R) C1H56_09360 PF03485 Arginyl tRNA synthetase N terminal domain C1H56_09360 PF05746 DALR anticodon binding domain C1H56_09375 PF02421 Ferrous iron transport protein B C1H56_09375 PF07670 Nucleoside recognition C1H56_09375 PF07664 Ferrous iron transport protein B C terminus C1H56_09380 PF04023 FeoA domain C1H56_09385 PF12833 Helix-turn-helix domain C1H56_09385 PF02311 AraC-like ligand binding domain C1H56_09390 PF01297 Zinc-uptake complex component A periplasmic C1H56_09395 PF00005 ABC transporter C1H56_09400 PF00950 ABC 3 transport family C1H56_09405 PF00549 CoA-ligase C1H56_09405 PF02629 CoA binding domain C1H56_09410 PF08442 ATP-grasp domain C1H56_09410 PF00549 CoA-ligase C1H56_09415 PF02817 e3 binding domain C1H56_09415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1H56_09415 PF00364 Biotin-requiring enzyme C1H56_09420 PF02779 Transketolase, pyrimidine binding domain C1H56_09420 PF16870 2-oxoglutarate dehydrogenase C-terminal C1H56_09420 PF16078 2-oxoglutarate dehydrogenase N-terminus C1H56_09420 PF00676 Dehydrogenase E1 component C1H56_09425 PF13085 2Fe-2S iron-sulfur cluster binding domain C1H56_09430 PF00890 FAD binding domain C1H56_09430 PF02910 Fumarate reductase flavoprotein C-term C1H56_09435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1H56_09440 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1H56_09445 PF00285 Citrate synthase, C-terminal domain C1H56_09450 PF01784 NIF3 (NGG1p interacting factor 3) C1H56_09460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1H56_09460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1H56_09460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1H56_09460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1H56_09465 PF03925 SeqA protein C-terminal domain C1H56_09465 PF17206 SeqA protein N-terminal domain C1H56_09470 PF12697 Alpha/beta hydrolase family C1H56_09480 PF00258 Flavodoxin C1H56_09485 PF04172 LrgB-like family C1H56_09490 PF03788 LrgA family C1H56_09495 PF03466 LysR substrate binding domain C1H56_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_09505 PF01475 Ferric uptake regulator family C1H56_09510 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1H56_09510 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1H56_09515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1H56_09515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1H56_09515 PF11890 Domain of unknown function (DUF3410) C1H56_09520 PF00109 Beta-ketoacyl synthase, N-terminal domain C1H56_09520 PF02801 Beta-ketoacyl synthase, C-terminal domain C1H56_09525 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C1H56_09525 PF01266 FAD dependent oxidoreductase C1H56_09530 PF03358 NADPH-dependent FMN reductase C1H56_09535 PF08891 YfcL protein C1H56_09540 PF04315 Elongation factor P hydroxylase C1H56_09545 PF03458 UPF0126 domain C1H56_09550 PF01264 Chorismate synthase C1H56_09560 PF05175 Methyltransferase small domain C1H56_09565 PF01713 Smr domain C1H56_09570 PF01312 FlhB HrpN YscU SpaS Family C1H56_09575 PF01311 Bacterial export proteins, family 1 C1H56_09580 PF01313 Bacterial export proteins, family 3 C1H56_09585 PF00813 FliP family C1H56_09590 PF04347 Flagellar biosynthesis protein, FliO C1H56_09595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1H56_09600 PF02154 Flagellar motor switch protein FliM C1H56_09600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1H56_09605 PF03748 Flagellar basal body-associated protein FliL C1H56_09625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1H56_09625 PF18269 T3SS EscN ATPase C-terminal domain C1H56_09630 PF02108 Flagellar assembly protein FliH C1H56_09635 PF01706 FliG C-terminal domain C1H56_09635 PF14841 FliG middle domain C1H56_09635 PF14842 FliG N-terminal domain C1H56_09640 PF08345 Flagellar M-ring protein C-terminal C1H56_09640 PF01514 Secretory protein of YscJ/FliF family C1H56_09645 PF02049 Flagellar hook-basal body complex protein FliE C1H56_09650 PF00158 Sigma-54 interaction domain C1H56_09650 PF00072 Response regulator receiver domain C1H56_09650 PF02954 Bacterial regulatory protein, Fis family C1H56_09655 PF13493 Domain of unknown function (DUF4118) C1H56_09655 PF13426 PAS domain C1H56_09655 PF00512 His Kinase A (phospho-acceptor) domain C1H56_09655 PF00989 PAS fold C1H56_09655 PF08447 PAS fold C1H56_09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_09660 PF02954 Bacterial regulatory protein, Fis family C1H56_09660 PF00158 Sigma-54 interaction domain C1H56_09660 PF00072 Response regulator receiver domain C1H56_09665 PF02561 Flagellar protein FliS C1H56_09675 PF02465 Flagellar hook-associated protein 2 N-terminus C1H56_09675 PF07196 Flagellin hook IN motif C1H56_09675 PF07195 Flagellar hook-associated protein 2 C-terminus C1H56_09680 PF03646 FlaG protein C1H56_09685 PF00700 Bacterial flagellin C-terminal helical region C1H56_09685 PF07196 Flagellin hook IN motif C1H56_09685 PF00669 Bacterial flagellin N-terminal helical region C1H56_09690 PF00700 Bacterial flagellin C-terminal helical region C1H56_09690 PF07196 Flagellin hook IN motif C1H56_09690 PF00669 Bacterial flagellin N-terminal helical region C1H56_09695 PF00700 Bacterial flagellin C-terminal helical region C1H56_09695 PF07196 Flagellin hook IN motif C1H56_09695 PF00669 Bacterial flagellin N-terminal helical region C1H56_09700 PF04261 Dyp-type peroxidase family C1H56_09705 PF11143 Protein of unknown function (DUF2919) C1H56_09720 PF03960 ArsC family C1H56_09725 PF01546 Peptidase family M20/M25/M40 C1H56_09725 PF07687 Peptidase dimerisation domain C1H56_09730 PF02557 D-alanyl-D-alanine carboxypeptidase C1H56_09740 PF06804 NlpB/DapX lipoprotein C1H56_09745 PF00701 Dihydrodipicolinate synthetase family C1H56_09755 PF00578 AhpC/TSA family C1H56_09760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_09760 PF00672 HAMP domain C1H56_09760 PF02743 Cache domain C1H56_09765 PF01594 AI-2E family transporter C1H56_09775 PF13181 Tetratricopeptide repeat C1H56_09775 PF01435 Peptidase family M48 C1H56_09780 PF03960 ArsC family C1H56_09785 PF03358 NADPH-dependent FMN reductase C1H56_09800 PF00860 Permease family C1H56_09805 PF04073 Aminoacyl-tRNA editing domain C1H56_09810 PF02872 5'-nucleotidase, C-terminal domain C1H56_09810 PF00149 Calcineurin-like phosphoesterase C1H56_09815 PF00793 DAHP synthetase I family C1H56_09820 PF13369 Transglutaminase-like superfamily C1H56_09825 PF04247 Invasion gene expression up-regulator, SirB C1H56_09830 PF13847 Methyltransferase domain C1H56_09830 PF17827 PrmC N-terminal domain C1H56_09835 PF00472 RF-1 domain C1H56_09835 PF03462 PCRF domain C1H56_09840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C1H56_09840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1H56_09840 PF01488 Shikimate / quinate 5-dehydrogenase C1H56_09845 PF03550 Outer membrane lipoprotein LolB C1H56_09850 PF00288 GHMP kinases N terminal domain C1H56_09850 PF08544 GHMP kinases C terminal C1H56_09855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1H56_09855 PF14572 Phosphoribosyl synthetase-associated domain C1H56_09860 PF01195 Peptidyl-tRNA hydrolase C1H56_09865 PF06071 Protein of unknown function (DUF933) C1H56_09865 PF01926 50S ribosome-binding GTPase C1H56_09950 PF00669 Bacterial flagellin N-terminal helical region C1H56_09950 PF07196 Flagellin hook IN motif C1H56_09950 PF00700 Bacterial flagellin C-terminal helical region C1H56_09955 PF00669 Bacterial flagellin N-terminal helical region C1H56_09955 PF07196 Flagellin hook IN motif C1H56_09955 PF00700 Bacterial flagellin C-terminal helical region C1H56_09965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1H56_09965 PF07196 Flagellin hook IN motif C1H56_09970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C1H56_09970 PF10135 Rod binding protein C1H56_09975 PF02119 Flagellar P-ring protein C1H56_09980 PF02107 Flagellar L-ring protein C1H56_09985 PF00460 Flagella basal body rod protein C1H56_09985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1H56_09990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1H56_09990 PF00460 Flagella basal body rod protein C1H56_09995 PF00460 Flagella basal body rod protein C1H56_09995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1H56_09995 PF07559 Flagellar basal body protein FlaE C1H56_10000 PF13860 FlgD Ig-like domain C1H56_10000 PF03963 Flagellar hook capping protein - N-terminal region C1H56_10000 PF13861 FlgD Tudor-like domain C1H56_10005 PF00460 Flagella basal body rod protein C1H56_10005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1H56_10010 PF00460 Flagella basal body rod protein C1H56_10015 PF01739 CheR methyltransferase, SAM binding domain C1H56_10015 PF03705 CheR methyltransferase, all-alpha domain C1H56_10020 PF01584 CheW-like domain C1H56_10020 PF00072 Response regulator receiver domain C1H56_10055 PF08242 Methyltransferase domain C1H56_10055 PF00668 Condensation domain C1H56_10055 PF00550 Phosphopantetheine attachment site C1H56_10055 PF00501 AMP-binding enzyme C1H56_10060 PF04954 Siderophore-interacting protein C1H56_10060 PF08021 Siderophore-interacting FAD-binding domain C1H56_10065 PF07715 TonB-dependent Receptor Plug Domain C1H56_10075 PF00691 OmpA family C1H56_10075 PF01389 OmpA-like transmembrane domain C1H56_10080 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1H56_10085 PF00403 Heavy-metal-associated domain C1H56_10095 PF02838 Glycosyl hydrolase family 20, domain 2 C1H56_10095 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1H56_10095 PF00728 Glycosyl hydrolase family 20, catalytic domain C1H56_10095 PF03173 Putative carbohydrate binding domain C1H56_10100 PF01963 TraB family C1H56_10115 PF01713 Smr domain C1H56_10120 PF00849 RNA pseudouridylate synthase C1H56_10120 PF01479 S4 domain C1H56_10125 PF00990 Diguanylate cyclase, GGDEF domain C1H56_10125 PF08448 PAS fold C1H56_10135 PF02769 AIR synthase related protein, C-terminal domain C1H56_10135 PF00586 AIR synthase related protein, N-terminal domain C1H56_10140 PF00551 Formyl transferase C1H56_10145 PF13230 Glutamine amidotransferases class-II C1H56_10150 PF13580 SIS domain C1H56_10155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1H56_10155 PF09317 Domain of unknown function (DUF1974) C1H56_10155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1H56_10155 PF02770 Acyl-CoA dehydrogenase, middle domain C1H56_10165 PF00929 Exonuclease C1H56_10170 PF00075 RNase H C1H56_10175 PF08241 Methyltransferase domain C1H56_10180 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1H56_10180 PF00753 Metallo-beta-lactamase superfamily C1H56_10185 PF01476 LysM domain C1H56_10185 PF01464 Transglycosylase SLT domain C1H56_10190 PF03372 Endonuclease/Exonuclease/phosphatase family C1H56_10195 PF00543 Nitrogen regulatory protein P-II C1H56_10200 PF05870 Phenolic acid decarboxylase (PAD) C1H56_10205 PF00034 Cytochrome c C1H56_10210 PF01171 PP-loop family C1H56_10210 PF09179 TilS substrate binding domain C1H56_10210 PF11734 TilS substrate C-terminal domain C1H56_10215 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C1H56_10220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1H56_10220 PF01336 OB-fold nucleic acid binding domain C1H56_10220 PF02811 PHP domain C1H56_10220 PF14579 Helix-hairpin-helix motif C1H56_10220 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1H56_10225 PF01351 Ribonuclease HII C1H56_10230 PF02684 Lipid-A-disaccharide synthetase C1H56_10235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1H56_10235 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_10240 PF07977 FabA-like domain C1H56_10245 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_10245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1H56_10250 PF03938 Outer membrane protein (OmpH-like) C1H56_10255 PF01103 Surface antigen C1H56_10255 PF07244 Surface antigen variable number repeat C1H56_10260 PF17820 PDZ domain C1H56_10260 PF02163 Peptidase family M50 C1H56_10265 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1H56_10265 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1H56_10265 PF13288 DXP reductoisomerase C-terminal domain C1H56_10275 PF01255 Putative undecaprenyl diphosphate synthase C1H56_10280 PF01765 Ribosome recycling factor C1H56_10285 PF00696 Amino acid kinase family C1H56_10290 PF00889 Elongation factor TS C1H56_10295 PF00318 Ribosomal protein S2 C1H56_10300 PF00557 Metallopeptidase family M24 C1H56_10305 PF01909 Nucleotidyltransferase domain C1H56_10305 PF01966 HD domain C1H56_10305 PF08335 GlnD PII-uridylyltransferase C1H56_10315 PF11944 Protein of unknown function (DUF3461) C1H56_10320 PF04608 Phosphatidylglycerophosphatase A C1H56_10325 PF02769 AIR synthase related protein, C-terminal domain C1H56_10325 PF00586 AIR synthase related protein, N-terminal domain C1H56_10330 PF01029 NusB family C1H56_10335 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1H56_10340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1H56_10340 PF00925 GTP cyclohydrolase II C1H56_10345 PF00677 Lumazine binding domain C1H56_10350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1H56_10350 PF01872 RibD C-terminal domain C1H56_10355 PF03477 ATP cone domain C1H56_10360 PF00171 Aldehyde dehydrogenase family C1H56_10365 PF00696 Amino acid kinase family C1H56_10365 PF01472 PUA domain C1H56_10370 PF07417 Sigma factor-binding transcriptional regulator Crl C1H56_10380 PF00156 Phosphoribosyl transferase domain C1H56_10385 PF00860 Permease family C1H56_10390 PF01546 Peptidase family M20/M25/M40 C1H56_10390 PF07687 Peptidase dimerisation domain C1H56_10395 PF08443 RimK-like ATP-grasp domain C1H56_10395 PF18030 RimK PreATP-grasp domain C1H56_10400 PF08443 RimK-like ATP-grasp domain C1H56_10400 PF18030 RimK PreATP-grasp domain C1H56_10410 PF00209 Sodium:neurotransmitter symporter family C1H56_10415 PF00990 Diguanylate cyclase, GGDEF domain C1H56_10415 PF17158 Membrane-associated sensor, integral membrane domain C1H56_10425 PF11798 IMS family HHH motif C1H56_10425 PF00817 impB/mucB/samB family C1H56_10435 PF02424 ApbE family C1H56_10440 PF00175 Oxidoreductase NAD-binding domain C1H56_10440 PF00970 Oxidoreductase FAD-binding domain C1H56_10440 PF00111 2Fe-2S iron-sulfur cluster binding domain C1H56_10445 PF02508 Rnf-Nqr subunit, membrane protein C1H56_10450 PF02508 Rnf-Nqr subunit, membrane protein C1H56_10455 PF04205 FMN-binding domain C1H56_10460 PF03116 NQR2, RnfD, RnfE family C1H56_10465 PF11973 NQRA C-terminal domain C1H56_10465 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C1H56_10470 PF01722 BolA-like protein C1H56_10475 PF05175 Methyltransferase small domain C1H56_10485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1H56_10495 PF07690 Major Facilitator Superfamily C1H56_10505 PF04542 Sigma-70 region 2 C1H56_10505 PF04545 Sigma-70, region 4 C1H56_10515 PF03502 Nucleoside-specific channel-forming protein, Tsx C1H56_10520 PF02558 Ketopantoate reductase PanE/ApbA C1H56_10520 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1H56_10525 PF01965 DJ-1/PfpI family C1H56_10530 PF00266 Aminotransferase class-V C1H56_10535 PF02657 Fe-S metabolism associated domain C1H56_10540 PF00899 ThiF family C1H56_10545 PF06725 3D domain C1H56_10545 PF03562 MltA specific insert domain C1H56_10555 PF00696 Amino acid kinase family C1H56_10555 PF00583 Acetyltransferase (GNAT) family C1H56_10565 PF13538 UvrD-like helicase C-terminal domain C1H56_10570 PF12705 PD-(D/E)XK nuclease superfamily C1H56_10570 PF13361 UvrD-like helicase C-terminal domain C1H56_10570 PF00580 UvrD/REP helicase N-terminal domain C1H56_10575 PF17946 RecC C-terminal domain C1H56_10590 PF07130 YebG protein C1H56_10595 PF14602 Hexapeptide repeat of succinyl-transferase C1H56_10595 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C1H56_10605 PF00583 Acetyltransferase (GNAT) family C1H56_10610 PF18030 RimK PreATP-grasp domain C1H56_10610 PF02080 TrkA-C domain C1H56_10610 PF08443 RimK-like ATP-grasp domain C1H56_10615 PF01544 CorA-like Mg2+ transporter protein C1H56_10625 PF01588 Putative tRNA binding domain C1H56_10630 PF00356 Bacterial regulatory proteins, lacI family C1H56_10635 PF00703 Glycosyl hydrolases family 2 C1H56_10635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1H56_10635 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1H56_10635 PF02929 Beta galactosidase small chain C1H56_10635 PF16353 Domain of unknown function(DUF4981) C1H56_10645 PF00072 Response regulator receiver domain C1H56_10650 PF00501 AMP-binding enzyme C1H56_10655 PF00679 Elongation factor G C-terminus C1H56_10655 PF00009 Elongation factor Tu GTP binding domain C1H56_10655 PF14492 Elongation Factor G, domain II C1H56_10655 PF03144 Elongation factor Tu domain 2 C1H56_10655 PF03764 Elongation factor G, domain IV C1H56_10660 PF18073 Rubredoxin metal binding domain C1H56_10675 PF18429 Domain of unknown function (DUF5609) C1H56_10685 PF01048 Phosphorylase superfamily C1H56_10690 PF01676 Metalloenzyme superfamily C1H56_10695 PF02885 Glycosyl transferase family, helical bundle domain C1H56_10695 PF00591 Glycosyl transferase family, a/b domain C1H56_10695 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C1H56_10700 PF01791 DeoC/LacD family aldolase C1H56_10710 PF01773 Na+ dependent nucleoside transporter N-terminus C1H56_10710 PF07670 Nucleoside recognition C1H56_10710 PF07662 Na+ dependent nucleoside transporter C-terminus C1H56_10715 PF01026 TatD related DNase C1H56_10720 PF03883 Peroxide stress protein YaaA C1H56_10725 PF01235 Sodium:alanine symporter family C1H56_10740 PF03167 Uracil DNA glycosylase superfamily C1H56_10745 PF01261 Xylose isomerase-like TIM barrel C1H56_10750 PF01228 Glycine radical C1H56_10755 PF14821 Threonine synthase N terminus C1H56_10755 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_10760 PF00288 GHMP kinases N terminal domain C1H56_10760 PF08544 GHMP kinases C terminal C1H56_10765 PF00696 Amino acid kinase family C1H56_10765 PF00742 Homoserine dehydrogenase C1H56_10765 PF01842 ACT domain C1H56_10765 PF03447 Homoserine dehydrogenase, NAD binding domain C1H56_10765 PF13840 ACT domain C1H56_10780 PF03737 Aldolase/RraA C1H56_10790 PF00072 Response regulator receiver domain C1H56_10790 PF00486 Transcriptional regulatory protein, C terminal C1H56_10795 PF00072 Response regulator receiver domain C1H56_10795 PF18415 Histidine kinase receptor ArcB trans-membrane domain C1H56_10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_10795 PF00512 His Kinase A (phospho-acceptor) domain C1H56_10795 PF01627 Hpt domain C1H56_10795 PF00989 PAS fold C1H56_10800 PF00563 EAL domain C1H56_10800 PF01590 GAF domain C1H56_10800 PF00990 Diguanylate cyclase, GGDEF domain C1H56_10800 PF00360 Phytochrome region C1H56_10805 PF16199 Radical_SAM C-terminal domain C1H56_10805 PF04055 Radical SAM superfamily C1H56_10810 PF01493 GXGXG motif C1H56_10810 PF01645 Conserved region in glutamate synthase C1H56_10810 PF04898 Glutamate synthase central domain C1H56_10810 PF00310 Glutamine amidotransferases class-II C1H56_10815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1H56_10815 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_10820 PF04898 Glutamate synthase central domain C1H56_10820 PF00310 Glutamine amidotransferases class-II C1H56_10820 PF01645 Conserved region in glutamate synthase C1H56_10820 PF01493 GXGXG motif C1H56_10825 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_10825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1H56_10835 PF01048 Phosphorylase superfamily C1H56_10845 PF01497 Periplasmic binding protein C1H56_10850 PF03458 UPF0126 domain C1H56_10855 PF03466 LysR substrate binding domain C1H56_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_10860 PF01925 Sulfite exporter TauE/SafE C1H56_10865 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C1H56_10870 PF00005 ABC transporter C1H56_10890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1H56_10890 PF02142 MGS-like domain C1H56_10890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1H56_10895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1H56_10895 PF00117 Glutamine amidotransferase class-I C1H56_10905 PF05173 Dihydrodipicolinate reductase, C-terminus C1H56_10905 PF01113 Dihydrodipicolinate reductase, N-terminus C1H56_10910 PF00293 NUDIX domain C1H56_10915 PF02810 SEC-C motif C1H56_10915 PF01043 SecA preprotein cross-linking domain C1H56_10915 PF07516 SecA Wing and Scaffold domain C1H56_10915 PF07517 SecA DEAD-like domain C1H56_10925 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1H56_10930 PF12327 FtsZ family, C-terminal domain C1H56_10930 PF00091 Tubulin/FtsZ family, GTPase domain C1H56_10935 PF02491 SHS2 domain inserted in FTSA C1H56_10940 PF08478 POTRA domain, FtsQ-type C1H56_10940 PF03799 Cell division protein FtsQ C1H56_10945 PF01225 Mur ligase family, catalytic domain C1H56_10945 PF02875 Mur ligase family, glutamate ligase domain C1H56_10945 PF08245 Mur ligase middle domain C1H56_10950 PF04101 Glycosyltransferase family 28 C-terminal domain C1H56_10950 PF03033 Glycosyltransferase family 28 N-terminal domain C1H56_10955 PF01098 Cell cycle protein C1H56_10960 PF08245 Mur ligase middle domain C1H56_10960 PF02875 Mur ligase family, glutamate ligase domain C1H56_10965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1H56_10965 PF00953 Glycosyl transferase family 4 C1H56_10970 PF08245 Mur ligase middle domain C1H56_10970 PF02875 Mur ligase family, glutamate ligase domain C1H56_10970 PF01225 Mur ligase family, catalytic domain C1H56_10975 PF08245 Mur ligase middle domain C1H56_10975 PF02875 Mur ligase family, glutamate ligase domain C1H56_10975 PF01225 Mur ligase family, catalytic domain C1H56_10980 PF03717 Penicillin-binding Protein dimerisation domain C1H56_10980 PF00905 Penicillin binding protein transpeptidase domain C1H56_10985 PF04999 Cell division protein FtsL C1H56_10990 PF01795 MraW methylase family C1H56_11000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1H56_11000 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_11005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1H56_11005 PF00364 Biotin-requiring enzyme C1H56_11005 PF02817 e3 binding domain C1H56_11010 PF00456 Transketolase, thiamine diphosphate binding domain C1H56_11010 PF17831 Pyruvate dehydrogenase E1 component middle domain C1H56_11015 PF00392 Bacterial regulatory proteins, gntR family C1H56_11015 PF07729 FCD domain C1H56_11025 PF02872 5'-nucleotidase, C-terminal domain C1H56_11025 PF00149 Calcineurin-like phosphoesterase C1H56_11030 PF01368 DHH family C1H56_11030 PF02272 DHHA1 domain C1H56_11030 PF17768 RecJ OB domain C1H56_11035 PF13098 Thioredoxin-like domain C1H56_11035 PF10411 Disulfide bond isomerase protein N-terminus C1H56_11040 PF02899 Phage integrase, N-terminal SAM-like domain C1H56_11040 PF00589 Phage integrase family C1H56_11045 PF00258 Flavodoxin C1H56_11050 PF01510 N-acetylmuramoyl-L-alanine amidase C1H56_11055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1H56_11055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1H56_11060 PF07963 Prokaryotic N-terminal methylation motif C1H56_11060 PF00114 Pilin (bacterial filament) C1H56_11065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C1H56_11065 PF00437 Type II/IV secretion system protein C1H56_11070 PF00482 Type II secretion system (T2SS), protein F C1H56_11075 PF01478 Type IV leader peptidase family C1H56_11075 PF06750 Bacterial Peptidase A24 N-terminal domain C1H56_11080 PF01121 Dephospho-CoA kinase C1H56_11085 PF07072 Cell division protein C1H56_11090 PF03884 DNA gyrase inhibitor YacG C1H56_11095 PF03989 DNA gyrase C-terminal domain, beta-propeller C1H56_11095 PF00521 DNA gyrase/topoisomerase IV, subunit A C1H56_11100 PF00986 DNA gyrase B subunit, carboxyl terminus C1H56_11100 PF00204 DNA gyrase B C1H56_11100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_11100 PF01751 Toprim domain C1H56_11105 PF05728 Uncharacterised protein family (UPF0227) C1H56_11110 PF00149 Calcineurin-like phosphoesterase C1H56_11115 PF06853 Protein of unknown function (DUF1249) C1H56_11120 PF00293 NUDIX domain C1H56_11125 PF02321 Outer membrane efflux protein C1H56_11130 PF01467 Cytidylyltransferase-like C1H56_11130 PF00294 pfkB family carbohydrate kinase C1H56_11135 PF08335 GlnD PII-uridylyltransferase C1H56_11135 PF03710 Glutamate-ammonia ligase adenylyltransferase C1H56_11140 PF00672 HAMP domain C1H56_11140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_11140 PF02743 Cache domain C1H56_11145 PF01928 CYTH domain C1H56_11150 PF01865 Protein of unknown function DUF47 C1H56_11155 PF01384 Phosphate transporter family C1H56_11160 PF08239 Bacterial SH3 domain C1H56_11170 PF13401 AAA domain C1H56_11170 PF01471 Putative peptidoglycan binding domain C1H56_11175 PF01743 Poly A polymerase head domain C1H56_11175 PF01966 HD domain C1H56_11175 PF12627 Probable RNA and SrmB- binding site of polymerase A C1H56_11180 PF03952 Enolase, N-terminal domain C1H56_11180 PF00113 Enolase, C-terminal TIM barrel domain C1H56_11185 PF06418 CTP synthase N-terminus C1H56_11185 PF00117 Glutamine amidotransferase class-I C1H56_11190 PF03819 MazG nucleotide pyrophosphohydrolase domain C1H56_11195 PF04607 Region found in RelA / SpoT proteins C1H56_11195 PF02824 TGS domain C1H56_11195 PF13291 ACT domain C1H56_11200 PF01938 TRAM domain C1H56_11200 PF05958 tRNA (Uracil-5-)-methyltransferase C1H56_11205 PF00512 His Kinase A (phospho-acceptor) domain C1H56_11205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C1H56_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_11205 PF01627 Hpt domain C1H56_11205 PF00672 HAMP domain C1H56_11205 PF00072 Response regulator receiver domain C1H56_11210 PF00563 EAL domain C1H56_11210 PF00990 Diguanylate cyclase, GGDEF domain C1H56_11225 PF01648 4'-phosphopantetheinyl transferase superfamily C1H56_11230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1H56_11235 PF11967 Recombination protein O N terminal C1H56_11235 PF02565 Recombination protein O C terminal C1H56_11240 PF07650 KH domain C1H56_11240 PF01926 50S ribosome-binding GTPase C1H56_11245 PF14622 Ribonuclease-III-like C1H56_11245 PF00035 Double-stranded RNA binding motif C1H56_11250 PF10502 Signal peptidase, peptidase S26 C1H56_11255 PF03144 Elongation factor Tu domain 2 C1H56_11255 PF00679 Elongation factor G C-terminus C1H56_11255 PF06421 GTP-binding protein LepA C-terminus C1H56_11255 PF00009 Elongation factor Tu GTP binding domain C1H56_11265 PF03888 MucB/RseB N-terminal domain C1H56_11265 PF17188 MucB/RseB C-terminal domain C1H56_11270 PF03873 Anti sigma-E protein RseA, C-terminal domain C1H56_11270 PF03872 Anti sigma-E protein RseA, N-terminal domain C1H56_11275 PF04542 Sigma-70 region 2 C1H56_11275 PF08281 Sigma-70, region 4 C1H56_11285 PF00890 FAD binding domain C1H56_11285 PF02910 Fumarate reductase flavoprotein C-term C1H56_11295 PF03937 Flavinator of succinate dehydrogenase C1H56_11310 PF01494 FAD binding domain C1H56_11315 PF01494 FAD binding domain C1H56_11320 PF03695 Uncharacterised protein family (UPF0149) C1H56_11325 PF05164 Cell division protein ZapA C1H56_11335 PF01812 5-formyltetrahydrofolate cyclo-ligase family C1H56_11340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C1H56_11345 PF01842 ACT domain C1H56_11345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1H56_11345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1H56_11350 PF10369 Small subunit of acetolactate synthase C1H56_11355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1H56_11355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1H56_11355 PF00205 Thiamine pyrophosphate enzyme, central domain C1H56_11360 PF00501 AMP-binding enzyme C1H56_11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_11365 PF03466 LysR substrate binding domain C1H56_11375 PF01569 PAP2 superfamily C1H56_11385 PF00682 HMGL-like C1H56_11385 PF08502 LeuA allosteric (dimerisation) domain C1H56_11390 PF00180 Isocitrate/isopropylmalate dehydrogenase C1H56_11395 PF00330 Aconitase family (aconitate hydratase) C1H56_11400 PF00694 Aconitase C-terminal domain C1H56_11445 PF00072 Response regulator receiver domain C1H56_11460 PF03739 Lipopolysaccharide export system permease LptF/LptG C1H56_11465 PF03739 Lipopolysaccharide export system permease LptF/LptG C1H56_11470 PF02789 Cytosol aminopeptidase family, N-terminal domain C1H56_11470 PF00883 Cytosol aminopeptidase family, catalytic domain C1H56_11475 PF04364 DNA polymerase III chi subunit, HolC C1H56_11480 PF00133 tRNA synthetases class I (I, L, M and V) C1H56_11480 PF10458 Valyl tRNA synthetase tRNA binding arm C1H56_11480 PF08264 Anticodon-binding domain of tRNA C1H56_11485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1H56_11485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1H56_11490 PF00849 RNA pseudouridylate synthase C1H56_11495 PF18337 RapA N-terminal Tudor like domain C1H56_11495 PF18339 RapA N-terminal Tudor like domain 1 C1H56_11495 PF00176 SNF2 family N-terminal domain C1H56_11495 PF12137 RNA polymerase recycling family C-terminal C1H56_11495 PF00271 Helicase conserved C-terminal domain C1H56_11505 PF13638 PIN domain C1H56_11505 PF02562 PhoH-like protein C1H56_11510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1H56_11510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1H56_11515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1H56_11515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1H56_11520 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C1H56_11520 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C1H56_11525 PF01042 Endoribonuclease L-PSP C1H56_11530 PF01553 Acyltransferase C1H56_11535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1H56_11540 PF01722 BolA-like protein C1H56_11550 PF05494 MlaC protein C1H56_11555 PF02470 MlaD protein C1H56_11560 PF02405 Permease MlaE C1H56_11565 PF00005 ABC transporter C1H56_11575 PF01699 Sodium/calcium exchanger protein C1H56_11580 PF01380 SIS domain C1H56_11580 PF00571 CBS domain C1H56_11595 PF03968 OstA-like protein C1H56_11600 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1H56_11600 PF00005 ABC transporter C1H56_11605 PF04963 Sigma-54 factor, core binding domain C1H56_11605 PF04552 Sigma-54, DNA binding domain C1H56_11605 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1H56_11610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1H56_11615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1H56_11620 PF03668 P-loop ATPase protein family C1H56_11625 PF00381 PTS HPr component phosphorylation site C1H56_11630 PF00571 CBS domain C1H56_11630 PF01769 Divalent cation transporter C1H56_11630 PF03448 MgtE intracellular N domain C1H56_11635 PF01523 Putative modulator of DNA gyrase C1H56_11640 PF04751 Protein of unknown function (DUF615) C1H56_11645 PF00005 ABC transporter C1H56_11650 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_11660 PF02441 Flavoprotein C1H56_11665 PF08245 Mur ligase middle domain C1H56_11665 PF02875 Mur ligase family, glutamate ligase domain C1H56_11665 PF01225 Mur ligase family, catalytic domain C1H56_11675 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C1H56_11680 PF00719 Inorganic pyrophosphatase C1H56_11685 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like C1H56_11690 PF04357 TamB, inner membrane protein subunit of TAM complex C1H56_11695 PF17243 POTRA domain TamA domain 1 C1H56_11695 PF01103 Surface antigen C1H56_11695 PF07244 Surface antigen variable number repeat C1H56_11700 PF01625 Peptide methionine sulfoxide reductase C1H56_11705 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C1H56_11710 PF10795 Protein of unknown function (DUF2607) C1H56_11720 PF00005 ABC transporter C1H56_11745 PF00009 Elongation factor Tu GTP binding domain C1H56_11750 PF01507 Phosphoadenosine phosphosulfate reductase family C1H56_11755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1H56_11755 PF10414 Sirohaem synthase dimerisation region C1H56_11755 PF14824 Sirohaem biosynthesis protein central C1H56_11760 PF00149 Calcineurin-like phosphoesterase C1H56_11760 PF02872 5'-nucleotidase, C-terminal domain C1H56_11770 PF00271 Helicase conserved C-terminal domain C1H56_11770 PF00270 DEAD/DEAH box helicase C1H56_11770 PF03880 DbpA RNA binding domain C1H56_11775 PF13673 Acetyltransferase (GNAT) domain C1H56_11780 PF00892 EamA-like transporter family C1H56_11785 PF08525 Opacity-associated protein A N-terminal motif C1H56_11785 PF04225 Opacity-associated protein A LysM-like domain C1H56_11790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1H56_11790 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1H56_11800 PF01196 Ribosomal protein L17 C1H56_11805 PF01000 RNA polymerase Rpb3/RpoA insert domain C1H56_11805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1H56_11805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1H56_11810 PF01479 S4 domain C1H56_11810 PF00163 Ribosomal protein S4/S9 N-terminal domain C1H56_11815 PF00411 Ribosomal protein S11 C1H56_11820 PF00416 Ribosomal protein S13/S18 C1H56_11825 PF00444 Ribosomal protein L36 C1H56_11830 PF00344 SecY translocase C1H56_11835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1H56_11840 PF00327 Ribosomal protein L30p/L7e C1H56_11845 PF00333 Ribosomal protein S5, N-terminal domain C1H56_11845 PF03719 Ribosomal protein S5, C-terminal domain C1H56_11850 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1H56_11855 PF00347 Ribosomal protein L6 C1H56_11860 PF00410 Ribosomal protein S8 C1H56_11865 PF00253 Ribosomal protein S14p/S29e C1H56_11870 PF00281 Ribosomal protein L5 C1H56_11870 PF00673 ribosomal L5P family C-terminus C1H56_11875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1H56_11875 PF00467 KOW motif C1H56_11880 PF00238 Ribosomal protein L14p/L23e C1H56_11885 PF00366 Ribosomal protein S17 C1H56_11890 PF00831 Ribosomal L29 protein C1H56_11895 PF00252 Ribosomal protein L16p/L10e C1H56_11900 PF07650 KH domain C1H56_11900 PF00189 Ribosomal protein S3, C-terminal domain C1H56_11905 PF00237 Ribosomal protein L22p/L17e C1H56_11910 PF00203 Ribosomal protein S19 C1H56_11915 PF00181 Ribosomal Proteins L2, RNA binding domain C1H56_11915 PF03947 Ribosomal Proteins L2, C-terminal domain C1H56_11920 PF00276 Ribosomal protein L23 C1H56_11925 PF00573 Ribosomal protein L4/L1 family C1H56_11930 PF00297 Ribosomal protein L3 C1H56_11935 PF00338 Ribosomal protein S10p/S20e C1H56_11940 PF00588 SpoU rRNA Methylase family C1H56_11940 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1H56_11945 PF00773 RNB domain C1H56_11945 PF08206 Ribonuclease B OB domain C1H56_11945 PF17876 Cold shock domain C1H56_11945 PF08461 Ribonuclease R winged-helix domain C1H56_11945 PF00575 S1 RNA binding domain C1H56_11950 PF00884 Sulfatase C1H56_11950 PF11893 Domain of unknown function (DUF3413) C1H56_11955 PF08238 Sel1 repeat C1H56_11965 PF00709 Adenylosuccinate synthetase C1H56_11970 PF01112 Asparaginase C1H56_11975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1H56_11985 PF00999 Sodium/hydrogen exchanger family C1H56_11985 PF02254 TrkA-N domain C1H56_11990 PF02525 Flavodoxin-like fold C1H56_11995 PF00005 ABC transporter C1H56_11995 PF12848 ABC transporter C1H56_12005 PF00561 alpha/beta hydrolase fold C1H56_12010 PF06794 Uncharacterised protein family (UPF0270) C1H56_12015 PF00485 Phosphoribulokinase / Uridine kinase family C1H56_12020 PF00027 Cyclic nucleotide-binding domain C1H56_12020 PF13545 Crp-like helix-turn-helix domain C1H56_12030 PF00171 Aldehyde dehydrogenase family C1H56_12035 PF04958 Arginine N-succinyltransferase beta subunit C1H56_12040 PF00202 Aminotransferase class-III C1H56_12045 PF00117 Glutamine amidotransferase class-I C1H56_12050 PF18693 TRAM domain C1H56_12050 PF04055 Radical SAM superfamily C1H56_12050 PF00919 Uncharacterized protein family UPF0004 C1H56_12065 PF00579 tRNA synthetases class I (W and Y) C1H56_12070 PF13419 Haloacid dehalogenase-like hydrolase C1H56_12075 PF00834 Ribulose-phosphate 3 epimerase family C1H56_12080 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1H56_12090 PF01761 3-dehydroquinate synthase C1H56_12095 PF01202 Shikimate kinase C1H56_12100 PF11741 AMIN domain C1H56_12100 PF00263 Bacterial type II and III secretion system protein C1H56_12100 PF07660 Secretin and TonB N terminus short domain C1H56_12100 PF03958 Bacterial type II/III secretion system short domain C1H56_12125 PF00905 Penicillin binding protein transpeptidase domain C1H56_12125 PF17092 Penicillin-binding protein OB-like domain C1H56_12125 PF00912 Transglycosylase C1H56_12130 PF03466 LysR substrate binding domain C1H56_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_12135 PF08534 Redoxin C1H56_12135 PF00462 Glutaredoxin C1H56_12140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1H56_12140 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_12150 PF00206 Lyase C1H56_12150 PF14698 Argininosuccinate lyase C-terminal C1H56_12160 PF00764 Arginosuccinate synthase C1H56_12165 PF00696 Amino acid kinase family C1H56_12170 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1H56_12170 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1H56_12175 PF07687 Peptidase dimerisation domain C1H56_12175 PF01546 Peptidase family M20/M25/M40 C1H56_12180 PF00311 Phosphoenolpyruvate carboxylase C1H56_12190 PF06426 Serine acetyltransferase, N-terminal C1H56_12190 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_12195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1H56_12195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1H56_12200 PF02556 Preprotein translocase subunit SecB C1H56_12205 PF00581 Rhodanese-like domain C1H56_12210 PF00152 tRNA synthetases class II (D, K and N) C1H56_12215 PF02910 Fumarate reductase flavoprotein C-term C1H56_12215 PF00890 FAD binding domain C1H56_12220 PF13183 4Fe-4S dicluster domain C1H56_12220 PF13085 2Fe-2S iron-sulfur cluster binding domain C1H56_12225 PF02300 Fumarate reductase subunit C C1H56_12230 PF02313 Fumarate reductase subunit D C1H56_12235 PF09285 Elongation factor P, C-terminal C1H56_12235 PF08207 Elongation factor P (EF-P) KOW-like domain C1H56_12235 PF01132 Elongation factor P (EF-P) OB domain C1H56_12240 PF04055 Radical SAM superfamily C1H56_12250 PF00118 TCP-1/cpn60 chaperonin family C1H56_12255 PF00166 Chaperonin 10 Kd subunit C1H56_12260 PF00455 DeoR C terminal sensor domain C1H56_12260 PF08220 DeoR-like helix-turn-helix domain C1H56_12285 PF00121 Triosephosphate isomerase C1H56_12295 PF03737 Aldolase/RraA C1H56_12300 PF01040 UbiA prenyltransferase family C1H56_12305 PF10431 C-terminal, D2-small domain, of ClpB protein C1H56_12305 PF07724 AAA domain (Cdc48 subfamily) C1H56_12305 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_12310 PF00227 Proteasome subunit C1H56_12315 PF05036 Sporulation related domain C1H56_12320 PF00356 Bacterial regulatory proteins, lacI family C1H56_12325 PF18074 Primosomal protein N C-terminal domain C1H56_12325 PF17764 3′ DNA-binding domain (3′BD) C1H56_12325 PF00271 Helicase conserved C-terminal domain C1H56_12325 PF00270 DEAD/DEAH box helicase C1H56_12325 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1H56_12330 PF01197 Ribosomal protein L31 C1H56_12335 PF00390 Malic enzyme, N-terminal domain C1H56_12335 PF03949 Malic enzyme, NAD binding domain C1H56_12340 PF01340 Met Apo-repressor, MetJ C1H56_12345 PF01053 Cys/Met metabolism PLP-dependent enzyme C1H56_12350 PF00696 Amino acid kinase family C1H56_12350 PF00742 Homoserine dehydrogenase C1H56_12350 PF03447 Homoserine dehydrogenase, NAD binding domain C1H56_12355 PF02219 Methylenetetrahydrofolate reductase C1H56_12360 PF06005 Cell division protein ZapB C1H56_12365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C1H56_12370 PF00365 Phosphofructokinase C1H56_12375 PF01545 Cation efflux family C1H56_12375 PF16916 Dimerisation domain of Zinc Transporter C1H56_12385 PF00072 Response regulator receiver domain C1H56_12385 PF00486 Transcriptional regulatory protein, C terminal C1H56_12390 PF00512 His Kinase A (phospho-acceptor) domain C1H56_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_12390 PF16527 Two-component sensor protein CpxA, periplasmic domain C1H56_12390 PF00672 HAMP domain C1H56_12395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1H56_12395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1H56_12400 PF00588 SpoU rRNA Methylase family C1H56_12405 PF04186 FxsA cytoplasmic membrane protein C1H56_12410 PF17158 Membrane-associated sensor, integral membrane domain C1H56_12410 PF00990 Diguanylate cyclase, GGDEF domain C1H56_12415 PF10415 Fumarase C C-terminus C1H56_12415 PF00206 Lyase C1H56_12420 PF03605 Anaerobic c4-dicarboxylate membrane transporter C1H56_12430 PF11412 Disulphide bond corrector protein DsbC C1H56_12430 PF02683 Cytochrome C biogenesis protein transmembrane region C1H56_12435 PF00072 Response regulator receiver domain C1H56_12435 PF00196 Bacterial regulatory proteins, luxR family C1H56_12440 PF03471 Transporter associated domain C1H56_12440 PF00999 Sodium/hydrogen exchanger family C1H56_12440 PF02080 TrkA-C domain C1H56_12450 PF00474 Sodium:solute symporter family C1H56_12455 PF02592 Putative vitamin uptake transporter C1H56_12460 PF00625 Guanylate kinase C1H56_12465 PF01192 RNA polymerase Rpb6 C1H56_12470 PF04607 Region found in RelA / SpoT proteins C1H56_12470 PF02824 TGS domain C1H56_12470 PF13291 ACT domain C1H56_12475 PF00270 DEAD/DEAH box helicase C1H56_12475 PF17191 RecG wedge domain C1H56_12475 PF00271 Helicase conserved C-terminal domain C1H56_12480 PF00860 Permease family C1H56_12485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_12485 PF00672 HAMP domain C1H56_12485 PF00512 His Kinase A (phospho-acceptor) domain C1H56_12490 PF00072 Response regulator receiver domain C1H56_12490 PF00486 Transcriptional regulatory protein, C terminal C1H56_12495 PF03449 Transcription elongation factor, N-terminal C1H56_12495 PF01272 Transcription elongation factor, GreA/GreB, C-term C1H56_12500 PF16921 Tex protein YqgF-like domain C1H56_12500 PF00575 S1 RNA binding domain C1H56_12500 PF09371 Tex-like protein N-terminal domain C1H56_12500 PF17674 HHH domain C1H56_12510 PF00561 alpha/beta hydrolase fold C1H56_12515 PF00156 Phosphoribosyl transferase domain C1H56_12520 PF01521 Iron-sulphur cluster biosynthesis C1H56_12520 PF01106 NifU-like domain C1H56_12525 PF00293 NUDIX domain C1H56_12530 PF00459 Inositol monophosphatase family C1H56_12535 PF01203 Type II secretion system (T2SS), protein N C1H56_12540 PF04612 Type II secretion system (T2SS), protein M C1H56_12545 PF05134 Type II secretion system (T2SS), protein L C1H56_12545 PF12693 GspL periplasmic domain C1H56_12550 PF03934 Type II secretion system (T2SS), protein K C1H56_12555 PF11612 Type II secretion system (T2SS), protein J C1H56_12555 PF07963 Prokaryotic N-terminal methylation motif C1H56_12560 PF02501 Type II secretion system (T2SS), protein I C1H56_12560 PF07963 Prokaryotic N-terminal methylation motif C1H56_12565 PF12019 Type II transport protein GspH C1H56_12570 PF08334 Type II secretion system (T2SS), protein G C1H56_12570 PF07963 Prokaryotic N-terminal methylation motif C1H56_12575 PF00482 Type II secretion system (T2SS), protein F C1H56_12580 PF00437 Type II/IV secretion system protein C1H56_12585 PF00263 Bacterial type II and III secretion system protein C1H56_12585 PF03958 Bacterial type II/III secretion system short domain C1H56_12590 PF11356 Type II secretion system protein C C1H56_12595 PF01479 S4 domain C1H56_12600 PF01430 Hsp33 protein C1H56_12605 PF01293 Phosphoenolpyruvate carboxykinase C1H56_12615 PF09500 Putative thioesterase (yiiD_Cterm) C1H56_12615 PF00583 Acetyltransferase (GNAT) family C1H56_12620 PF02580 D-Tyr-tRNA(Tyr) deacylase C1H56_12625 PF03631 Virulence factor BrkB C1H56_12630 PF03668 P-loop ATPase protein family C1H56_12645 PF03951 Glutamine synthetase, beta-Grasp domain C1H56_12645 PF00120 Glutamine synthetase, catalytic domain C1H56_12655 PF00512 His Kinase A (phospho-acceptor) domain C1H56_12655 PF00989 PAS fold C1H56_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_12660 PF00158 Sigma-54 interaction domain C1H56_12660 PF02954 Bacterial regulatory protein, Fis family C1H56_12660 PF00072 Response regulator receiver domain C1H56_12665 PF00563 EAL domain C1H56_12665 PF00990 Diguanylate cyclase, GGDEF domain C1H56_12665 PF03707 Bacterial signalling protein N terminal repeat C1H56_12665 PF13188 PAS domain C1H56_12670 PF00962 Adenosine/AMP deaminase C1H56_12740 PF01177 Asp/Glu/Hydantoin racemase C1H56_12745 PF05922 Peptidase inhibitor I9 C1H56_12745 PF04151 Bacterial pre-peptidase C-terminal domain C1H56_12745 PF00082 Subtilase family C1H56_12750 PF07715 TonB-dependent Receptor Plug Domain C1H56_12750 PF00593 TonB dependent receptor C1H56_12755 PF05958 tRNA (Uracil-5-)-methyltransferase C1H56_12765 PF00440 Bacterial regulatory proteins, tetR family C1H56_12775 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_12775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1H56_12780 PF04545 Sigma-70, region 4 C1H56_12780 PF04542 Sigma-70 region 2 C1H56_12780 PF00140 Sigma-70 factor, region 1.2 C1H56_12785 PF18075 FtsX extracellular domain C1H56_12790 PF00005 ABC transporter C1H56_12795 PF02881 SRP54-type protein, helical bundle domain C1H56_12795 PF00448 SRP54-type protein, GTPase domain C1H56_12840 PF00210 Ferritin-like domain C1H56_12845 PF00563 EAL domain C1H56_12845 PF08668 HDOD domain C1H56_12850 PF01810 LysE type translocator C1H56_12855 PF12146 Serine aminopeptidase, S33 C1H56_12880 PF00990 Diguanylate cyclase, GGDEF domain C1H56_12880 PF00563 EAL domain C1H56_12880 PF08495 FIST N domain C1H56_12880 PF10442 FIST C domain C1H56_12885 PF13419 Haloacid dehalogenase-like hydrolase C1H56_12890 PF00589 Phage integrase family C1H56_12890 PF02899 Phage integrase, N-terminal SAM-like domain C1H56_12895 PF04340 Protein of unknown function, DUF484 C1H56_12900 PF01678 Diaminopimelate epimerase C1H56_12905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1H56_12905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1H56_12915 PF01491 Frataxin-like domain C1H56_12920 PF01295 Adenylate cyclase, class-I C1H56_12920 PF12633 Adenylate cyclase NT domain C1H56_12930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1H56_12930 PF03900 Porphobilinogen deaminase, C-terminal domain C1H56_12935 PF02602 Uroporphyrinogen-III synthase HemD C1H56_12940 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C1H56_12945 PF07219 HemY protein N-terminus C1H56_12950 PF06969 HemN C-terminal domain C1H56_12950 PF04055 Radical SAM superfamily C1H56_12955 PF10675 Protein of unknown function (DUF2489) C1H56_12960 PF04220 Der GTPase activator (YihI) C1H56_12970 PF00034 Cytochrome c C1H56_12975 PF01926 50S ribosome-binding GTPase C1H56_12980 PF01367 5'-3' exonuclease, C-terminal SAM fold C1H56_12980 PF00476 DNA polymerase family A C1H56_12980 PF01612 3'-5' exonuclease C1H56_12980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1H56_12990 PF00490 Delta-aminolevulinic acid dehydratase C1H56_12995 PF01026 TatD related DNase C1H56_13005 PF00581 Rhodanese-like domain C1H56_13010 PF01694 Rhomboid family C1H56_13010 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C1H56_13015 PF02203 Tar ligand binding domain homologue C1H56_13015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_13015 PF00672 HAMP domain C1H56_13020 PF03748 Flagellar basal body-associated protein FliL C1H56_13030 PF04345 Chorismate lyase C1H56_13035 PF01040 UbiA prenyltransferase family C1H56_13040 PF01553 Acyltransferase C1H56_13050 PF00717 Peptidase S24-like C1H56_13050 PF01726 LexA DNA binding domain C1H56_13060 PF01554 MatE C1H56_13065 PF03150 Di-haem cytochrome c peroxidase C1H56_13065 PF00034 Cytochrome c C1H56_13070 PF00902 Sec-independent protein translocase protein (TatC) C1H56_13075 PF02416 mttA/Hcf106 family C1H56_13080 PF02416 mttA/Hcf106 family C1H56_13085 PF03109 ABC1 family C1H56_13090 PF02036 SCP-2 sterol transfer family C1H56_13095 PF01209 ubiE/COQ5 methyltransferase family C1H56_13100 PF02646 RmuC family C1H56_13115 PF10625 Universal stress protein B (UspB) C1H56_13120 PF00210 Ferritin-like domain C1H56_13130 PF00582 Universal stress protein family C1H56_13135 PF00892 EamA-like transporter family C1H56_13145 PF04445 Putative SAM-dependent methyltransferase C1H56_13150 PF00990 Diguanylate cyclase, GGDEF domain C1H56_13150 PF08448 PAS fold C1H56_13150 PF00563 EAL domain C1H56_13155 PF01037 Lrp/AsnC ligand binding domain C1H56_13165 PF07690 Major Facilitator Superfamily C1H56_13170 PF03466 LysR substrate binding domain C1H56_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_13175 PF01321 Creatinase/Prolidase N-terminal domain C1H56_13175 PF00557 Metallopeptidase family M24 C1H56_13175 PF01321 Creatinase/Prolidase N-terminal domain C1H56_13175 PF00557 Metallopeptidase family M24 C1H56_13180 PF06968 Biotin and Thiamin Synthesis associated domain C1H56_13180 PF04055 Radical SAM superfamily C1H56_13185 PF05690 Thiazole biosynthesis protein ThiG C1H56_13190 PF02597 ThiS family C1H56_13195 PF00899 ThiF family C1H56_13200 PF02581 Thiamine monophosphate synthase C1H56_13205 PF13667 ThiC-associated domain C1H56_13205 PF01964 Radical SAM ThiC family C1H56_13210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1H56_13250 PF00175 Oxidoreductase NAD-binding domain C1H56_13255 PF00970 Oxidoreductase FAD-binding domain C1H56_13255 PF00111 2Fe-2S iron-sulfur cluster binding domain C1H56_13255 PF00175 Oxidoreductase NAD-binding domain C1H56_13260 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C1H56_13270 PF07497 Rho termination factor, RNA-binding domain C1H56_13270 PF07498 Rho termination factor, N-terminal domain C1H56_13270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1H56_13275 PF00085 Thioredoxin C1H56_13280 PF00271 Helicase conserved C-terminal domain C1H56_13280 PF00270 DEAD/DEAH box helicase C1H56_13285 PF02541 Ppx/GppA phosphatase family C1H56_13290 PF00072 Response regulator receiver domain C1H56_13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_13290 PF09456 RcsC Alpha-Beta-Loop (ABL) C1H56_13290 PF00512 His Kinase A (phospho-acceptor) domain C1H56_13295 PF12832 MFS_1 like family C1H56_13315 PF13193 AMP-binding enzyme C-terminal domain C1H56_13315 PF00501 AMP-binding enzyme C1H56_13315 PF16177 Acetyl-coenzyme A synthetase N-terminus C1H56_13320 PF01220 Dehydroquinase class II C1H56_13325 PF00364 Biotin-requiring enzyme C1H56_13330 PF02785 Biotin carboxylase C-terminal domain C1H56_13330 PF00289 Biotin carboxylase, N-terminal domain C1H56_13330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1H56_13340 PF01207 Dihydrouridine synthase (Dus) C1H56_13345 PF02954 Bacterial regulatory protein, Fis family C1H56_13350 PF00356 Bacterial regulatory proteins, lacI family C1H56_13350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1H56_13355 PF00920 Dehydratase family C1H56_13360 PF01202 Shikimate kinase C1H56_13365 PF02447 GntP family permease C1H56_13370 PF01081 KDPG and KHG aldolase C1H56_13375 PF07715 TonB-dependent Receptor Plug Domain C1H56_13375 PF00593 TonB dependent receptor C1H56_13390 PF17200 Single Cache domain 2 C1H56_13390 PF00672 HAMP domain C1H56_13390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_13395 PF01276 Orn/Lys/Arg decarboxylase, major domain C1H56_13395 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C1H56_13395 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C1H56_13400 PF13520 Amino acid permease C1H56_13405 PF18500 CadC C-terminal domain 1 C1H56_13405 PF00486 Transcriptional regulatory protein, C terminal C1H56_13410 PF13411 MerR HTH family regulatory protein C1H56_13420 PF01808 AICARFT/IMPCHase bienzyme C1H56_13420 PF02142 MGS-like domain C1H56_13425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1H56_13425 PF02843 Phosphoribosylglycinamide synthetase, C domain C1H56_13425 PF02844 Phosphoribosylglycinamide synthetase, N domain C1H56_13435 PF00216 Bacterial DNA-binding protein C1H56_13440 PF01595 Cyclin M transmembrane N-terminal domain C1H56_13440 PF00571 CBS domain C1H56_13445 PF00480 ROK family C1H56_13450 PF01238 Phosphomannose isomerase type I C1H56_13455 PF04222 Protein of unknown function (DUF416) C1H56_13460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1H56_13465 PF03167 Uracil DNA glycosylase superfamily C1H56_13470 PF00924 Mechanosensitive ion channel C1H56_13475 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1H56_13475 PF00753 Metallo-beta-lactamase superfamily C1H56_13475 PF10996 Beta-Casp domain C1H56_13480 PF02397 Bacterial sugar transferase C1H56_13485 PF01370 NAD dependent epimerase/dehydratase family C1H56_13490 PF02719 Polysaccharide biosynthesis protein C1H56_13520 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_13530 PF00465 Iron-containing alcohol dehydrogenase C1H56_13530 PF00171 Aldehyde dehydrogenase family C1H56_13535 PF13193 AMP-binding enzyme C-terminal domain C1H56_13535 PF00501 AMP-binding enzyme C1H56_13545 PF14524 Wzt C-terminal domain C1H56_13545 PF00005 ABC transporter C1H56_13560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1H56_13565 PF16363 GDP-mannose 4,6 dehydratase C1H56_13570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1H56_13570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1H56_13570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1H56_13570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1H56_13575 PF00483 Nucleotidyl transferase C1H56_13575 PF01050 Mannose-6-phosphate isomerase C1H56_13580 PF01370 NAD dependent epimerase/dehydratase family C1H56_13585 PF00457 Glycosyl hydrolases family 11 C1H56_13585 PF01522 Polysaccharide deacetylase C1H56_13600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C1H56_13610 PF04488 Glycosyltransferase sugar-binding region containing DXD motif C1H56_13615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C1H56_13650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C1H56_13655 PF00535 Glycosyl transferase family 2 C1H56_13660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C1H56_13665 PF01467 Cytidylyltransferase-like C1H56_13670 PF06827 Zinc finger found in FPG and IleRS C1H56_13670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C1H56_13670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C1H56_13680 PF00471 Ribosomal protein L33 C1H56_13685 PF00830 Ribosomal L28 family C1H56_13690 PF04002 RadC-like JAB domain C1H56_13695 PF00672 HAMP domain C1H56_13695 PF02743 Cache domain C1H56_13695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_13700 PF02441 Flavoprotein C1H56_13700 PF04127 DNA / pantothenate metabolism flavoprotein C1H56_13710 PF00440 Bacterial regulatory proteins, tetR family C1H56_13715 PF03279 Bacterial lipid A biosynthesis acyltransferase C1H56_13720 PF03279 Bacterial lipid A biosynthesis acyltransferase C1H56_13725 PF00156 Phosphoribosyl transferase domain C1H56_13730 PF01138 3' exoribonuclease family, domain 1 C1H56_13730 PF03725 3' exoribonuclease family, domain 2 C1H56_13735 PF08340 Domain of unknown function (DUF1732) C1H56_13735 PF03755 YicC-like family, N-terminal region C1H56_13740 PF03350 Uncharacterized protein family, UPF0114 C1H56_13745 PF02378 Phosphotransferase system, EIIC C1H56_13745 PF00367 phosphotransferase system, EIIB C1H56_13750 PF13580 SIS domain C1H56_13760 PF01418 Helix-turn-helix domain, rpiR family C1H56_13760 PF01380 SIS domain C1H56_13765 PF01032 FecCD transport family C1H56_13770 PF01497 Periplasmic binding protein C1H56_13775 PF00005 ABC transporter C1H56_13780 PF00593 TonB dependent receptor C1H56_13780 PF07715 TonB-dependent Receptor Plug Domain C1H56_13785 PF00664 ABC transporter transmembrane region C1H56_13785 PF00005 ABC transporter C1H56_13800 PF09382 RQC domain C1H56_13800 PF00270 DEAD/DEAH box helicase C1H56_13800 PF00271 Helicase conserved C-terminal domain C1H56_13800 PF16124 RecQ zinc-binding C1H56_13800 PF00570 HRDC domain C1H56_13805 PF00892 EamA-like transporter family C1H56_13815 PF12833 Helix-turn-helix domain C1H56_13820 PF01810 LysE type translocator C1H56_13835 PF13361 UvrD-like helicase C-terminal domain C1H56_13835 PF00580 UvrD/REP helicase N-terminal domain C1H56_13840 PF01432 Peptidase family M3 C1H56_13845 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C1H56_13850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1H56_13850 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_13925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1H56_13935 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_13935 PF12911 N-terminal TM domain of oligopeptide transport permease C C1H56_13945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_13950 PF00005 ABC transporter C1H56_13950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_13990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1H56_13995 PF00580 UvrD/REP helicase N-terminal domain C1H56_13995 PF13361 UvrD-like helicase C-terminal domain C1H56_14000 PF00440 Bacterial regulatory proteins, tetR family C1H56_14005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_14010 PF00873 AcrB/AcrD/AcrF family C1H56_14015 PF04380 Membrane fusogenic activity C1H56_14020 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1H56_14020 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1H56_14025 PF03466 LysR substrate binding domain C1H56_14025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_14070 PF12724 Flavodoxin domain C1H56_14075 PF02386 Cation transport protein C1H56_14080 PF09186 Domain of unknown function (DUF1949) C1H56_14080 PF01205 Uncharacterized protein family UPF0029 C1H56_14085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1H56_14085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1H56_14085 PF00378 Enoyl-CoA hydratase/isomerase C1H56_14090 PF02803 Thiolase, C-terminal domain C1H56_14090 PF00108 Thiolase, N-terminal domain C1H56_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_14095 PF03466 LysR substrate binding domain C1H56_14100 PF07690 Major Facilitator Superfamily C1H56_14105 PF12804 MobA-like NTP transferase domain C1H56_14105 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_14110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1H56_14110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1H56_14115 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1H56_14115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1H56_14120 PF00231 ATP synthase C1H56_14125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1H56_14125 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1H56_14125 PF00306 ATP synthase alpha/beta chain, C terminal domain C1H56_14130 PF00213 ATP synthase delta (OSCP) subunit C1H56_14135 PF00430 ATP synthase B/B' CF(0) C1H56_14140 PF00137 ATP synthase subunit C C1H56_14145 PF00119 ATP synthase A chain C1H56_14150 PF03899 ATP synthase I chain C1H56_14155 PF02195 ParB-like nuclease domain C1H56_14155 PF17762 HTH domain found in ParB protein C1H56_14160 PF13614 AAA domain C1H56_14165 PF02527 rRNA small subunit methyltransferase G C1H56_14170 PF01134 Glucose inhibited division protein A C1H56_14170 PF13932 GidA associated domain C1H56_14180 PF00258 Flavodoxin C1H56_14185 PF10396 GTP-binding protein TrmE N-terminus C1H56_14185 PF12631 MnmE helical domain C1H56_14185 PF01926 50S ribosome-binding GTPase C1H56_14190 PF14849 YidC periplasmic domain C1H56_14190 PF02096 60Kd inner membrane protein C1H56_14195 PF01809 Putative membrane protein insertion efficiency factor C1H56_14200 PF00825 Ribonuclease P C1H56_14205 PF00468 Ribosomal protein L34 C1H56_14210 PF00005 ABC transporter C1H56_14215 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_14220 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_14245 PF01709 Transcriptional regulator C1H56_14250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1H56_14250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1H56_14255 PF00672 HAMP domain C1H56_14255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_14255 PF17200 Single Cache domain 2 C1H56_14265 PF10928 Protein of unknown function (DUF2810) C1H56_14270 PF00196 Bacterial regulatory proteins, luxR family C1H56_14270 PF17874 MalT-like TPR region C1H56_14275 PF00343 Carbohydrate phosphorylase C1H56_14280 PF02446 4-alpha-glucanotransferase C1H56_14285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1H56_14285 PF00128 Alpha amylase, catalytic domain C1H56_14285 PF02806 Alpha amylase, C-terminal all-beta domain C1H56_14295 PF05638 Type VI secretion system effector, Hcp C1H56_14300 PF16671 Actin cross-linking domain C1H56_14300 PF04717 Type VI secretion system, phage-baseplate injector C1H56_14325 PF01168 Alanine racemase, N-terminal domain C1H56_14325 PF00842 Alanine racemase, C-terminal domain C1H56_14325 PF01757 Acyltransferase family C1H56_14335 PF00939 Sodium:sulfate symporter transmembrane region C1H56_14340 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C1H56_14345 PF08329 Chitinase A, N-terminal domain C1H56_14345 PF00704 Glycosyl hydrolases family 18 C1H56_14365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_14365 PF02743 Cache domain C1H56_14365 PF00672 HAMP domain C1H56_14385 PF01569 PAP2 superfamily C1H56_14390 PF00375 Sodium:dicarboxylate symporter family C1H56_14400 PF02630 SCO1/SenC C1H56_14415 PF03616 Sodium/glutamate symporter C1H56_14420 PF12945 Flagellar protein YcgR C1H56_14420 PF07238 PilZ domain C1H56_14435 PF00529 HlyD membrane-fusion protein of T1SS C1H56_14435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1H56_14440 PF11742 Protein of unknown function (DUF3302) C1H56_14445 PF00990 Diguanylate cyclase, GGDEF domain C1H56_14460 PF01048 Phosphorylase superfamily C1H56_14470 PF08349 Protein of unknown function (DUF1722) C1H56_14475 PF13411 MerR HTH family regulatory protein C1H56_14480 PF03441 FAD binding domain of DNA photolyase C1H56_14480 PF00875 DNA photolyase C1H56_14485 PF03734 L,D-transpeptidase catalytic domain C1H56_14485 PF01476 LysM domain C1H56_14485 PF17969 L,D-transpeptidase C-terminal domain C1H56_14495 PF00271 Helicase conserved C-terminal domain C1H56_14495 PF00270 DEAD/DEAH box helicase C1H56_14500 PF00326 Prolyl oligopeptidase family C1H56_14500 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C1H56_14505 PF00593 TonB dependent receptor C1H56_14505 PF07715 TonB-dependent Receptor Plug Domain C1H56_14525 PF00672 HAMP domain C1H56_14525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_14525 PF12729 Four helix bundle sensory module for signal transduction C1H56_14530 PF12849 PBP superfamily domain C1H56_14535 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_14540 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_14545 PF00005 ABC transporter C1H56_14550 PF00990 Diguanylate cyclase, GGDEF domain C1H56_14550 PF00563 EAL domain C1H56_14550 PF03707 Bacterial signalling protein N terminal repeat C1H56_14570 PF01740 STAS domain C1H56_14570 PF00916 Sulfate permease family C1H56_14580 PF08525 Opacity-associated protein A N-terminal motif C1H56_14580 PF01551 Peptidase family M23 C1H56_14580 PF01476 LysM domain C1H56_14585 PF13188 PAS domain C1H56_14585 PF03707 Bacterial signalling protein N terminal repeat C1H56_14585 PF00990 Diguanylate cyclase, GGDEF domain C1H56_14585 PF00563 EAL domain C1H56_14590 PF03466 LysR substrate binding domain C1H56_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_14595 PF07690 Major Facilitator Superfamily C1H56_14600 PF09278 MerR, DNA binding C1H56_14600 PF00376 MerR family regulatory protein C1H56_14620 PF00375 Sodium:dicarboxylate symporter family C1H56_14630 PF02001 Protein of unknown function DUF134 C1H56_14650 PF01483 Proprotein convertase P-domain C1H56_14650 PF01447 Thermolysin metallopeptidase, catalytic domain C1H56_14650 PF02868 Thermolysin metallopeptidase, alpha-helical domain C1H56_14650 PF07504 Fungalysin/Thermolysin Propeptide Motif C1H56_14665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C1H56_14665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C1H56_14670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1H56_14670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C1H56_14675 PF00581 Rhodanese-like domain C1H56_14680 PF00563 EAL domain C1H56_14680 PF00196 Bacterial regulatory proteins, luxR family C1H56_14685 PF13419 Haloacid dehalogenase-like hydrolase C1H56_14690 PF01740 STAS domain C1H56_14690 PF00916 Sulfate permease family C1H56_14695 PF00849 RNA pseudouridylate synthase C1H56_14755 PF10431 C-terminal, D2-small domain, of ClpB protein C1H56_14755 PF07724 AAA domain (Cdc48 subfamily) C1H56_14755 PF17871 AAA lid domain C1H56_14755 PF00004 ATPase family associated with various cellular activities (AAA) C1H56_14790 PF04717 Type VI secretion system, phage-baseplate injector C1H56_14790 PF16671 Actin cross-linking domain C1H56_14805 PF05025 RbsD / FucU transport protein family C1H56_14810 PF00005 ABC transporter C1H56_14815 PF02653 Branched-chain amino acid transport system / permease component C1H56_14820 PF13407 Periplasmic binding protein domain C1H56_14825 PF00294 pfkB family carbohydrate kinase C1H56_14830 PF00356 Bacterial regulatory proteins, lacI family C1H56_14835 PF04973 Nicotinamide mononucleotide transporter C1H56_14840 PF04973 Nicotinamide mononucleotide transporter C1H56_14845 PF01048 Phosphorylase superfamily C1H56_14855 PF03009 Glycerophosphoryl diester phosphodiesterase family C1H56_14860 PF07690 Major Facilitator Superfamily C1H56_14875 PF02743 Cache domain C1H56_14875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_14875 PF00512 His Kinase A (phospho-acceptor) domain C1H56_14880 PF02954 Bacterial regulatory protein, Fis family C1H56_14880 PF00072 Response regulator receiver domain C1H56_14880 PF00158 Sigma-54 interaction domain C1H56_14900 PF01266 FAD dependent oxidoreductase C1H56_14905 PF12561 ToxR activated gene A lipoprotein domain C1H56_14905 PF00041 Fibronectin type III domain C1H56_14910 PF01327 Polypeptide deformylase C1H56_14920 PF03334 Na+/H+ antiporter subunit C1H56_14925 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C1H56_14945 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1H56_14945 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C1H56_14945 PF13244 Domain of unknown function (DUF4040) C1H56_14945 PF00361 Proton-conducting membrane transporter C1H56_14955 PF00582 Universal stress protein family C1H56_14960 PF03222 Tryptophan/tyrosine permease family C1H56_14965 PF01212 Beta-eliminating lyase C1H56_14975 PF12843 Putative quorum-sensing-regulated virulence factor C1H56_14985 PF08448 PAS fold C1H56_14985 PF00563 EAL domain C1H56_14985 PF00990 Diguanylate cyclase, GGDEF domain C1H56_14990 PF00313 'Cold-shock' DNA-binding domain C1H56_15005 PF13519 von Willebrand factor type A domain C1H56_15005 PF07584 Aerotolerance regulator N-terminal C1H56_15020 PF01882 Protein of unknown function DUF58 C1H56_15025 PF07726 ATPase family associated with various cellular activities (AAA) C1H56_15025 PF17863 AAA lid domain C1H56_15030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_15030 PF00672 HAMP domain C1H56_15030 PF02743 Cache domain C1H56_15045 PF07662 Na+ dependent nucleoside transporter C-terminus C1H56_15045 PF07670 Nucleoside recognition C1H56_15045 PF01773 Na+ dependent nucleoside transporter N-terminus C1H56_15050 PF07687 Peptidase dimerisation domain C1H56_15050 PF01546 Peptidase family M20/M25/M40 C1H56_15060 PF01590 GAF domain C1H56_15060 PF00158 Sigma-54 interaction domain C1H56_15065 PF00970 Oxidoreductase FAD-binding domain C1H56_15065 PF00042 Globin C1H56_15065 PF00175 Oxidoreductase NAD-binding domain C1H56_15070 PF00313 'Cold-shock' DNA-binding domain C1H56_15075 PF03889 Alternative ribosome-rescue factor A C1H56_15090 PF00072 Response regulator receiver domain C1H56_15100 PF01256 Carbohydrate kinase C1H56_15100 PF03853 YjeF-related protein N-terminus C1H56_15105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1H56_15105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1H56_15115 PF07885 Ion channel C1H56_15130 PF00478 IMP dehydrogenase / GMP reductase domain C1H56_15135 PF00145 C-5 cytosine-specific DNA methylase C1H56_15155 PF01797 Transposase IS200 like C1H56_15170 PF00271 Helicase conserved C-terminal domain C1H56_15170 PF00270 DEAD/DEAH box helicase C1H56_15175 PF03605 Anaerobic c4-dicarboxylate membrane transporter C1H56_15180 PF02540 NAD synthase C1H56_15185 PF01467 Cytidylyltransferase-like C1H56_15195 PF11849 Domain of unknown function (DUF3369) C1H56_15200 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_15200 PF00512 His Kinase A (phospho-acceptor) domain C1H56_15210 PF03553 Na+/H+ antiporter family C1H56_15215 PF07690 Major Facilitator Superfamily C1H56_15225 PF00990 Diguanylate cyclase, GGDEF domain C1H56_15225 PF08448 PAS fold C1H56_15230 PF00657 GDSL-like Lipase/Acylhydrolase C1H56_15235 PF12563 Hemolytic toxin N terminal C1H56_15235 PF07968 Leukocidin/Hemolysin toxin family C1H56_15235 PF16458 Beta-prism lectin C1H56_15240 PF12729 Four helix bundle sensory module for signal transduction C1H56_15240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_15240 PF00672 HAMP domain C1H56_15245 PF00561 alpha/beta hydrolase fold C1H56_15250 PF03280 Proteobacterial lipase chaperone protein C1H56_15255 PF00801 PKD domain C1H56_15255 PF05547 Immune inhibitor A peptidase M6 C1H56_15275 PF01032 FecCD transport family C1H56_15280 PF01032 FecCD transport family C1H56_15285 PF00005 ABC transporter C1H56_15290 PF12833 Helix-turn-helix domain C1H56_15295 PF00593 TonB dependent receptor C1H56_15295 PF07715 TonB-dependent Receptor Plug Domain C1H56_15305 PF00871 Acetokinase family C1H56_15320 PF00512 His Kinase A (phospho-acceptor) domain C1H56_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_15320 PF00672 HAMP domain C1H56_15325 PF00072 Response regulator receiver domain C1H56_15325 PF00486 Transcriptional regulatory protein, C terminal C1H56_15335 PF01261 Xylose isomerase-like TIM barrel C1H56_15340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1H56_15350 PF00596 Class II Aldolase and Adducin N-terminal domain C1H56_15355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1H56_15360 PF03611 PTS system sugar-specific permease component C1H56_15365 PF08220 DeoR-like helix-turn-helix domain C1H56_15365 PF00455 DeoR C terminal sensor domain C1H56_15375 PF01292 Prokaryotic cytochrome b561 C1H56_15380 PF00128 Alpha amylase, catalytic domain C1H56_15385 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_15405 PF00486 Transcriptional regulatory protein, C terminal C1H56_15405 PF00072 Response regulator receiver domain C1H56_15410 PF00672 HAMP domain C1H56_15410 PF14827 Double sensory domain of two-component sensor kinase C1H56_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_15410 PF00512 His Kinase A (phospho-acceptor) domain C1H56_15410 PF13426 PAS domain C1H56_15450 PF07690 Major Facilitator Superfamily C1H56_15455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_15455 PF00672 HAMP domain C1H56_15455 PF02743 Cache domain C1H56_15465 PF00768 D-alanyl-D-alanine carboxypeptidase C1H56_15465 PF07943 Penicillin-binding protein 5, C-terminal domain C1H56_15480 PF00194 Eukaryotic-type carbonic anhydrase C1H56_15485 PF01797 Transposase IS200 like C1H56_15495 PF02347 Glycine cleavage system P-protein C1H56_15500 PF01597 Glycine cleavage H-protein C1H56_15505 PF00464 Serine hydroxymethyltransferase C1H56_15515 PF01571 Aminomethyltransferase folate-binding domain C1H56_15515 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1H56_15525 PF01609 Transposase DDE domain C1H56_15525 PF05598 Transposase domain (DUF772) C1H56_15550 PF03129 Anticodon binding domain C1H56_15550 PF02824 TGS domain C1H56_15550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1H56_15550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1H56_15555 PF05198 Translation initiation factor IF-3, N-terminal domain C1H56_15555 PF00707 Translation initiation factor IF-3, C-terminal domain C1H56_15560 PF01632 Ribosomal protein L35 C1H56_15565 PF00453 Ribosomal protein L20 C1H56_15570 PF13495 Phage integrase, N-terminal SAM-like domain C1H56_15570 PF00589 Phage integrase family C1H56_15630 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_15675 PF13286 Phosphohydrolase-associated domain C1H56_15675 PF01966 HD domain C1H56_15705 PF00293 NUDIX domain C1H56_15730 PF13302 Acetyltransferase (GNAT) domain C1H56_15735 PF08212 Lipocalin-like domain C1H56_15765 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C1H56_15790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_15875 PF17676 LD-carboxypeptidase C-terminal domain C1H56_15875 PF02016 LD-carboxypeptidase N-terminal domain C1H56_15895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_15930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_15945 PF08212 Lipocalin-like domain C1H56_15965 PF04229 GrpB protein C1H56_15975 PF01810 LysE type translocator C1H56_16015 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH C1H56_16205 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB C1H56_16210 PF01381 Helix-turn-helix C1H56_16235 PF02567 Phenazine biosynthesis-like protein C1H56_16270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_16310 PF08212 Lipocalin-like domain C1H56_16380 PF13302 Acetyltransferase (GNAT) domain C1H56_16410 PF02567 Phenazine biosynthesis-like protein C1H56_16515 PF17676 LD-carboxypeptidase C-terminal domain C1H56_16515 PF02016 LD-carboxypeptidase N-terminal domain C1H56_16540 PF08212 Lipocalin-like domain C1H56_16545 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C1H56_16565 PF01555 DNA methylase C1H56_16610 PF01965 DJ-1/PfpI family C1H56_16610 PF12833 Helix-turn-helix domain C1H56_16670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_16720 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C1H56_16725 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA C1H56_16735 PF05598 Transposase domain (DUF772) C1H56_16735 PF01609 Transposase DDE domain C1H56_16740 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_16760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_16770 PF05016 ParE toxin of type II toxin-antitoxin system, parDE C1H56_16840 PF07859 alpha/beta hydrolase fold C1H56_16855 PF01797 Transposase IS200 like C1H56_16925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_16945 PF03477 ATP cone domain C1H56_16945 PF13597 Anaerobic ribonucleoside-triphosphate reductase C1H56_16955 PF00155 Aminotransferase class I and II C1H56_16960 PF18030 RimK PreATP-grasp domain C1H56_16960 PF08443 RimK-like ATP-grasp domain C1H56_16965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1H56_16965 PF02378 Phosphotransferase system, EIIC C1H56_16970 PF00294 pfkB family carbohydrate kinase C1H56_16975 PF00381 PTS HPr component phosphorylation site C1H56_16975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1H56_16980 PF00356 Bacterial regulatory proteins, lacI family C1H56_16980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1H56_16985 PF12320 Type 5 capsule protein repressor C-terminal domain C1H56_16985 PF00149 Calcineurin-like phosphoesterase C1H56_16990 PF13476 AAA domain C1H56_16995 PF00072 Response regulator receiver domain C1H56_16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17005 PF00155 Aminotransferase class I and II C1H56_17015 PF00654 Voltage gated chloride channel C1H56_17020 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1H56_17020 PF07683 Cobalamin synthesis protein cobW C-terminal domain C1H56_17025 PF01926 50S ribosome-binding GTPase C1H56_17030 PF02705 K+ potassium transporter C1H56_17035 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C1H56_17035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1H56_17035 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C1H56_17035 PF10371 Domain of unknown function C1H56_17035 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C1H56_17040 PF00512 His Kinase A (phospho-acceptor) domain C1H56_17040 PF02702 Osmosensitive K+ channel His kinase sensor domain C1H56_17040 PF13493 Domain of unknown function (DUF4118) C1H56_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17045 PF00072 Response regulator receiver domain C1H56_17045 PF00486 Transcriptional regulatory protein, C terminal C1H56_17050 PF02416 mttA/Hcf106 family C1H56_17055 PF09335 SNARE associated Golgi protein C1H56_17065 PF10388 EAL-domain associated signalling protein domain C1H56_17065 PF00563 EAL domain C1H56_17075 PF01292 Prokaryotic cytochrome b561 C1H56_17080 PF04264 YceI-like domain C1H56_17085 PF01226 Formate/nitrite transporter C1H56_17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_17090 PF03466 LysR substrate binding domain C1H56_17095 PF06496 Protein of unknown function (DUF1097) C1H56_17100 PF11398 Protein of unknown function (DUF2813) C1H56_17105 PF02872 5'-nucleotidase, C-terminal domain C1H56_17105 PF00149 Calcineurin-like phosphoesterase C1H56_17110 PF03741 Integral membrane protein TerC family C1H56_17120 PF08274 PhnA Zinc-Ribbon C1H56_17120 PF03831 PhnA domain C1H56_17155 PF17151 Periplasmic sensor domain C1H56_17155 PF00990 Diguanylate cyclase, GGDEF domain C1H56_17175 PF17158 Membrane-associated sensor, integral membrane domain C1H56_17175 PF00990 Diguanylate cyclase, GGDEF domain C1H56_17190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1H56_17190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C1H56_17190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1H56_17195 PF02233 NAD(P) transhydrogenase beta subunit C1H56_17205 PF00486 Transcriptional regulatory protein, C terminal C1H56_17205 PF00072 Response regulator receiver domain C1H56_17220 PF03701 Uncharacterised protein family (UPF0181) C1H56_17225 PF01253 Translation initiation factor SUI1 C1H56_17235 PF07478 D-ala D-ala ligase C-terminus C1H56_17235 PF01820 D-ala D-ala ligase N-terminus C1H56_17245 PF13607 Succinyl-CoA ligase like flavodoxin domain C1H56_17245 PF13380 CoA binding domain C1H56_17245 PF00583 Acetyltransferase (GNAT) family C1H56_17250 PF03466 LysR substrate binding domain C1H56_17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_17255 PF00593 TonB dependent receptor C1H56_17255 PF07715 TonB-dependent Receptor Plug Domain C1H56_17260 PF12793 Sugar transport-related sRNA regulator N-term C1H56_17260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_17270 PF03061 Thioesterase superfamily C1H56_17295 PF02798 Glutathione S-transferase, N-terminal domain C1H56_17295 PF00043 Glutathione S-transferase, C-terminal domain C1H56_17310 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_17310 PF12804 MobA-like NTP transferase domain C1H56_17310 PF03479 Plants and Prokaryotes Conserved (PCC) domain C1H56_17315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_17315 PF00005 ABC transporter C1H56_17320 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_17320 PF12911 N-terminal TM domain of oligopeptide transport permease C C1H56_17325 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_17330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1H56_17355 PF00854 POT family C1H56_17365 PF00392 Bacterial regulatory proteins, gntR family C1H56_17365 PF07702 UTRA domain C1H56_17370 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_17375 PF00005 ABC transporter C1H56_17385 PF00266 Aminotransferase class-V C1H56_17395 PF13419 Haloacid dehalogenase-like hydrolase C1H56_17400 PF14760 Rnk N-terminus C1H56_17400 PF01272 Transcription elongation factor, GreA/GreB, C-term C1H56_17405 PF13419 Haloacid dehalogenase-like hydrolase C1H56_17420 PF01741 Large-conductance mechanosensitive channel, MscL C1H56_17425 PF01268 Formate--tetrahydrofolate ligase C1H56_17430 PF01641 SelR domain C1H56_17430 PF01625 Peptide methionine sulfoxide reductase C1H56_17435 PF01227 GTP cyclohydrolase I C1H56_17440 PF03454 MoeA C-terminal region (domain IV) C1H56_17440 PF03453 MoeA N-terminal region (domain I and II) C1H56_17440 PF00994 Probable molybdopterin binding domain C1H56_17445 PF00899 ThiF family C1H56_17455 PF00581 Rhodanese-like domain C1H56_17460 PF04198 Putative sugar-binding domain C1H56_17470 PF00923 Transaldolase/Fructose-6-phosphate aldolase C1H56_17475 PF00456 Transketolase, thiamine diphosphate binding domain C1H56_17475 PF02780 Transketolase, C-terminal domain C1H56_17475 PF02779 Transketolase, pyrimidine binding domain C1H56_17490 PF07517 SecA DEAD-like domain C1H56_17490 PF01043 SecA preprotein cross-linking domain C1H56_17490 PF07516 SecA Wing and Scaffold domain C1H56_17490 PF02810 SEC-C motif C1H56_17500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1H56_17500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1H56_17515 PF06942 GlpM protein C1H56_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_17525 PF03466 LysR substrate binding domain C1H56_17530 PF03992 Antibiotic biosynthesis monooxygenase C1H56_17535 PF00881 Nitroreductase family C1H56_17545 PF00873 AcrB/AcrD/AcrF family C1H56_17560 PF04143 Sulphur transport C1H56_17575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1H56_17575 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1H56_17620 PF00367 phosphotransferase system, EIIB C1H56_17620 PF02378 Phosphotransferase system, EIIC C1H56_17630 PF00251 Glycosyl hydrolases family 32 N-terminal domain C1H56_17630 PF08244 Glycosyl hydrolases family 32 C terminal C1H56_17635 PF00294 pfkB family carbohydrate kinase C1H56_17640 PF01266 FAD dependent oxidoreductase C1H56_17640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C1H56_17645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_17645 PF00672 HAMP domain C1H56_17650 PF13488 Glycine zipper C1H56_17650 PF00691 OmpA family C1H56_17655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1H56_17655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1H56_17660 PF13419 Haloacid dehalogenase-like hydrolase C1H56_17665 PF12729 Four helix bundle sensory module for signal transduction C1H56_17665 PF00672 HAMP domain C1H56_17665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_17675 PF03606 C4-dicarboxylate anaerobic carrier C1H56_17680 PF03315 Serine dehydratase beta chain C1H56_17680 PF03313 Serine dehydratase alpha chain C1H56_17685 PF00474 Sodium:solute symporter family C1H56_17700 PF00356 Bacterial regulatory proteins, lacI family C1H56_17705 PF00196 Bacterial regulatory proteins, luxR family C1H56_17705 PF00072 Response regulator receiver domain C1H56_17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17710 PF07730 Histidine kinase C1H56_17710 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C1H56_17710 PF00672 HAMP domain C1H56_17715 PF13187 4Fe-4S dicluster domain C1H56_17715 PF12838 4Fe-4S dicluster domain C1H56_17725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1H56_17725 PF00384 Molybdopterin oxidoreductase C1H56_17725 PF01568 Molydopterin dinucleotide binding domain C1H56_17730 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C1H56_17735 PF03264 NapC/NirT cytochrome c family, N-terminal region C1H56_17745 PF01966 HD domain C1H56_17750 PF00196 Bacterial regulatory proteins, luxR family C1H56_17750 PF00072 Response regulator receiver domain C1H56_17755 PF05231 MASE1 C1H56_17755 PF07730 Histidine kinase C1H56_17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17760 PF07690 Major Facilitator Superfamily C1H56_17770 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_17775 PF08402 TOBE domain C1H56_17775 PF00005 ABC transporter C1H56_17780 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C1H56_17790 PF02803 Thiolase, C-terminal domain C1H56_17790 PF00108 Thiolase, N-terminal domain C1H56_17795 PF00106 short chain dehydrogenase C1H56_17800 PF02355 Protein export membrane protein C1H56_17800 PF07549 SecD/SecF GG Motif C1H56_17805 PF07549 SecD/SecF GG Motif C1H56_17805 PF13721 SecD export protein N-terminal TM region C1H56_17805 PF02355 Protein export membrane protein C1H56_17820 PF17158 Membrane-associated sensor, integral membrane domain C1H56_17820 PF00990 Diguanylate cyclase, GGDEF domain C1H56_17825 PF00483 Nucleotidyl transferase C1H56_17830 PF06483 Chitinase C C1H56_17830 PF00704 Glycosyl hydrolases family 18 C1H56_17835 PF00465 Iron-containing alcohol dehydrogenase C1H56_17845 PF02954 Bacterial regulatory protein, Fis family C1H56_17845 PF14532 Sigma-54 interaction domain C1H56_17845 PF00072 Response regulator receiver domain C1H56_17850 PF02743 Cache domain C1H56_17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17850 PF00512 His Kinase A (phospho-acceptor) domain C1H56_17860 PF07690 Major Facilitator Superfamily C1H56_17865 PF02887 Pyruvate kinase, alpha/beta domain C1H56_17865 PF00224 Pyruvate kinase, barrel domain C1H56_17870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17870 PF00072 Response regulator receiver domain C1H56_17870 PF00672 HAMP domain C1H56_17870 PF01627 Hpt domain C1H56_17870 PF00512 His Kinase A (phospho-acceptor) domain C1H56_17875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C1H56_17880 PF02142 MGS-like domain C1H56_17885 PF00857 Isochorismatase family C1H56_17890 PF01219 Prokaryotic diacylglycerol kinase C1H56_17905 PF13361 UvrD-like helicase C-terminal domain C1H56_17905 PF12462 DNA helicase IV / RNA helicase N terminal C1H56_17905 PF00580 UvrD/REP helicase N-terminal domain C1H56_17910 PF12805 FUSC-like inner membrane protein yccS C1H56_17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_17915 PF13188 PAS domain C1H56_17915 PF00072 Response regulator receiver domain C1H56_17915 PF00512 His Kinase A (phospho-acceptor) domain C1H56_17915 PF08448 PAS fold C1H56_17940 PF00005 ABC transporter C1H56_17940 PF03459 TOBE domain C1H56_17945 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_17955 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1H56_17955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1H56_18000 PF09308 LuxQ, periplasmic C1H56_18000 PF00072 Response regulator receiver domain C1H56_18000 PF00512 His Kinase A (phospho-acceptor) domain C1H56_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_18005 PF13407 Periplasmic binding protein domain C1H56_18015 PF01541 GIY-YIG catalytic domain C1H56_18020 PF04337 Protein of unknown function, DUF480 C1H56_18030 PF04363 Protein of unknown function (DUF496) C1H56_18045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1H56_18045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1H56_18050 PF00230 Major intrinsic protein C1H56_18055 PF01266 FAD dependent oxidoreductase C1H56_18055 PF04324 BFD-like [2Fe-2S] binding domain C1H56_18060 PF00890 FAD binding domain C1H56_18065 PF02754 Cysteine-rich domain C1H56_18065 PF13183 4Fe-4S dicluster domain C1H56_18070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1H56_18070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1H56_18075 PF00085 Thioredoxin C1H56_18080 PF07690 Major Facilitator Superfamily C1H56_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_18105 PF03466 LysR substrate binding domain C1H56_18110 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_18115 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_18120 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_18125 PF00005 ABC transporter C1H56_18135 PF05762 VWA domain containing CoxE-like protein C1H56_18140 PF12592 Protein of unknown function (DUF3763) C1H56_18140 PF17868 AAA lid domain C1H56_18140 PF07728 AAA domain (dynein-related subfamily) C1H56_18145 PF00293 NUDIX domain C1H56_18150 PF01212 Beta-eliminating lyase C1H56_18155 PF00034 Cytochrome c C1H56_18160 PF00440 Bacterial regulatory proteins, tetR family C1H56_18160 PF08361 MAATS-type transcriptional repressor, C-terminal region C1H56_18165 PF00271 Helicase conserved C-terminal domain C1H56_18165 PF00270 DEAD/DEAH box helicase C1H56_18170 PF04336 Acyl carrier protein phosphodiesterase C1H56_18180 PF03222 Tryptophan/tyrosine permease family C1H56_18185 PF12729 Four helix bundle sensory module for signal transduction C1H56_18185 PF00672 HAMP domain C1H56_18185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_18190 PF16363 GDP-mannose 4,6 dehydratase C1H56_18200 PF03746 LamB/YcsF family C1H56_18210 PF02626 Carboxyltransferase domain, subdomain A and B C1H56_18220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1H56_18220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1H56_18230 PF00005 ABC transporter C1H56_18235 PF13472 GDSL-like Lipase/Acylhydrolase family C1H56_18240 PF07055 Enoyl reductase FAD binding domain C1H56_18240 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C1H56_18240 PF12241 Trans-2-enoyl-CoA reductase catalytic region C1H56_18245 PF00990 Diguanylate cyclase, GGDEF domain C1H56_18245 PF00498 FHA domain C1H56_18245 PF00563 EAL domain C1H56_18260 PF00684 DnaJ central domain C1H56_18260 PF00226 DnaJ domain C1H56_18260 PF01556 DnaJ C terminal domain C1H56_18290 PF00239 Resolvase, N terminal domain C1H56_18290 PF02796 Helix-turn-helix domain of resolvase C1H56_18300 PF13419 Haloacid dehalogenase-like hydrolase C1H56_18315 PF00294 pfkB family carbohydrate kinase C1H56_18320 PF00884 Sulfatase C1H56_18330 PF00271 Helicase conserved C-terminal domain C1H56_18330 PF00270 DEAD/DEAH box helicase C1H56_18330 PF03880 DbpA RNA binding domain C1H56_18335 PF08206 Ribonuclease B OB domain C1H56_18335 PF00773 RNB domain C1H56_18335 PF00575 S1 RNA binding domain C1H56_18345 PF12849 PBP superfamily domain C1H56_18350 PF01575 MaoC like domain C1H56_18355 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C1H56_18360 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C1H56_18360 PF18416 N-acetylglucosamine binding protein domain 2 C1H56_18365 PF03413 Peptidase propeptide and YPEB domain C1H56_18365 PF01447 Thermolysin metallopeptidase, catalytic domain C1H56_18365 PF04151 Bacterial pre-peptidase C-terminal domain C1H56_18365 PF02868 Thermolysin metallopeptidase, alpha-helical domain C1H56_18365 PF07504 Fungalysin/Thermolysin Propeptide Motif C1H56_18370 PF04151 Bacterial pre-peptidase C-terminal domain C1H56_18370 PF04389 Peptidase family M28 C1H56_18375 PF00491 Arginase family C1H56_18380 PF17810 Arginine decarboxylase helical bundle domain C1H56_18380 PF17944 Arginine decarboxylase C-terminal helical extension C1H56_18380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1H56_18390 PF00571 CBS domain C1H56_18390 PF01769 Divalent cation transporter C1H56_18390 PF03448 MgtE intracellular N domain C1H56_18395 PF00166 Chaperonin 10 Kd subunit C1H56_18400 PF00118 TCP-1/cpn60 chaperonin family C1H56_18410 PF00696 Amino acid kinase family C1H56_18410 PF13840 ACT domain C1H56_18415 PF06339 Ectoine synthase C1H56_18420 PF00202 Aminotransferase class-III C1H56_18425 PF00583 Acetyltransferase (GNAT) family C1H56_18430 PF01329 Pterin 4 alpha carbinolamine dehydratase C1H56_18435 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C1H56_18440 PF00501 AMP-binding enzyme C1H56_18440 PF13193 AMP-binding enzyme C-terminal domain C1H56_18465 PF03466 LysR substrate binding domain C1H56_18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_18475 PF00892 EamA-like transporter family C1H56_18480 PF00132 Bacterial transferase hexapeptide (six repeats) C1H56_18480 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal C1H56_18480 PF14602 Hexapeptide repeat of succinyl-transferase C1H56_18485 PF00571 CBS domain C1H56_18485 PF03471 Transporter associated domain C1H56_18485 PF01595 Cyclin M transmembrane N-terminal domain C1H56_18490 PF02566 OsmC-like protein C1H56_18495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1H56_18500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1H56_18500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1H56_18515 PF13520 Amino acid permease C1H56_18520 PF00990 Diguanylate cyclase, GGDEF domain C1H56_18530 PF04397 LytTr DNA-binding domain C1H56_18530 PF00072 Response regulator receiver domain C1H56_18535 PF06580 Histidine kinase C1H56_18535 PF07694 5TMR of 5TMR-LYT C1H56_18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_18535 PF13492 GAF domain C1H56_18550 PF02687 FtsX-like permease family C1H56_18550 PF12704 MacB-like periplasmic core domain C1H56_18550 PF00005 ABC transporter C1H56_18555 PF00005 ABC transporter C1H56_18570 PF00248 Aldo/keto reductase family C1H56_18575 PF00128 Alpha amylase, catalytic domain C1H56_18585 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C1H56_18590 PF12262 Bacterial virulence factor lipase N-terminal C1H56_18595 PF13426 PAS domain C1H56_18595 PF08447 PAS fold C1H56_18595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_18600 PF07504 Fungalysin/Thermolysin Propeptide Motif C1H56_18600 PF04151 Bacterial pre-peptidase C-terminal domain C1H56_18600 PF02868 Thermolysin metallopeptidase, alpha-helical domain C1H56_18600 PF03413 Peptidase propeptide and YPEB domain C1H56_18600 PF01447 Thermolysin metallopeptidase, catalytic domain C1H56_18610 PF03922 OmpW family C1H56_18620 PF00768 D-alanyl-D-alanine carboxypeptidase C1H56_18625 PF00155 Aminotransferase class I and II C1H56_18625 PF00392 Bacterial regulatory proteins, gntR family C1H56_18630 PF01654 Cytochrome bd terminal oxidase subunit I C1H56_18635 PF02322 Cytochrome bd terminal oxidase subunit II C1H56_18655 PF00291 Pyridoxal-phosphate dependent enzyme C1H56_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_18660 PF03466 LysR substrate binding domain C1H56_18710 PF00107 Zinc-binding dehydrogenase C1H56_18710 PF08240 Alcohol dehydrogenase GroES-like domain C1H56_18715 PF00155 Aminotransferase class I and II C1H56_18735 PF03466 LysR substrate binding domain C1H56_18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_18740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1H56_18765 PF01966 HD domain C1H56_18770 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C1H56_18770 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C1H56_18775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1H56_18780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1H56_18780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C1H56_18805 PF02595 Glycerate kinase family C1H56_18810 PF02447 GntP family permease C1H56_18815 PF13556 PucR C-terminal helix-turn-helix domain C1H56_18815 PF17853 GGDEF-like domain C1H56_18815 PF05651 Putative sugar diacid recognition C1H56_18820 PF00672 HAMP domain C1H56_18820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_18825 PF01243 Pyridoxamine 5'-phosphate oxidase C1H56_18830 PF06228 Haem utilisation ChuX/HutX C1H56_18835 PF04055 Radical SAM superfamily C1H56_18840 PF03544 Gram-negative bacterial TonB protein C-terminal C1H56_18845 PF01618 MotA/TolQ/ExbB proton channel family C1H56_18850 PF02472 Biopolymer transport protein ExbD/TolR C1H56_18855 PF01497 Periplasmic binding protein C1H56_18860 PF01032 FecCD transport family C1H56_18865 PF00005 ABC transporter C1H56_18895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_18895 PF00672 HAMP domain C1H56_18895 PF02743 Cache domain C1H56_18900 PF03476 MOSC N-terminal beta barrel domain C1H56_18900 PF03473 MOSC domain C1H56_18900 PF00111 2Fe-2S iron-sulfur cluster binding domain C1H56_18900 PF03476 MOSC N-terminal beta barrel domain C1H56_18900 PF03473 MOSC domain C1H56_18900 PF00111 2Fe-2S iron-sulfur cluster binding domain C1H56_18910 PF01979 Amidohydrolase family C1H56_18920 PF05656 Protein of unknown function (DUF805) C1H56_18930 PF05958 tRNA (Uracil-5-)-methyltransferase C1H56_18935 PF05661 Protein of unknown function (DUF808) C1H56_18945 PF00313 'Cold-shock' DNA-binding domain C1H56_18975 PF00990 Diguanylate cyclase, GGDEF domain C1H56_18975 PF08448 PAS fold C1H56_18980 PF08220 DeoR-like helix-turn-helix domain C1H56_18980 PF00455 DeoR C terminal sensor domain C1H56_18995 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_19000 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_19000 PF14785 Maltose transport system permease protein MalF P2 domain C1H56_19005 PF01547 Bacterial extracellular solute-binding protein C1H56_19010 PF00005 ABC transporter C1H56_19010 PF08402 TOBE domain C1H56_19015 PF13302 Acetyltransferase (GNAT) domain C1H56_19030 PF01906 Putative heavy-metal-binding C1H56_19035 PF00196 Bacterial regulatory proteins, luxR family C1H56_19045 PF00072 Response regulator receiver domain C1H56_19045 PF01584 CheW-like domain C1H56_19050 PF01047 MarR family C1H56_19055 PF00990 Diguanylate cyclase, GGDEF domain C1H56_19075 PF00563 EAL domain C1H56_19075 PF03707 Bacterial signalling protein N terminal repeat C1H56_19075 PF00990 Diguanylate cyclase, GGDEF domain C1H56_19095 PF03466 LysR substrate binding domain C1H56_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_19100 PF00563 EAL domain C1H56_19100 PF00990 Diguanylate cyclase, GGDEF domain C1H56_19110 PF02678 Pirin C1H56_19110 PF05726 Pirin C-terminal cupin domain C1H56_19115 PF06865 Pyrimidine/purine nucleoside phosphorylase C1H56_19125 PF07690 Major Facilitator Superfamily C1H56_19135 PF00672 HAMP domain C1H56_19135 PF17200 Single Cache domain 2 C1H56_19135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19140 PF05362 Lon protease (S16) C-terminal proteolytic domain C1H56_19140 PF13654 AAA domain C1H56_19150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_19150 PF00005 ABC transporter C1H56_19155 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_19160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19160 PF08447 PAS fold C1H56_19160 PF13426 PAS domain C1H56_19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_19175 PF03466 LysR substrate binding domain C1H56_19180 PF02652 L-lactate permease C1H56_19185 PF01070 FMN-dependent dehydrogenase C1H56_19195 PF03618 Kinase/pyrophosphorylase C1H56_19200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1H56_19200 PF00391 PEP-utilising enzyme, mobile domain C1H56_19200 PF02896 PEP-utilising enzyme, TIM barrel domain C1H56_19205 PF08447 PAS fold C1H56_19205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19210 PF01554 MatE C1H56_19215 PF00270 DEAD/DEAH box helicase C1H56_19215 PF00271 Helicase conserved C-terminal domain C1H56_19220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_19220 PF03466 LysR substrate binding domain C1H56_19230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1H56_19240 PF00664 ABC transporter transmembrane region C1H56_19240 PF00005 ABC transporter C1H56_19250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1H56_19260 PF01810 LysE type translocator C1H56_19265 PF12833 Helix-turn-helix domain C1H56_19280 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1H56_19285 PF01047 MarR family C1H56_19290 PF02566 OsmC-like protein C1H56_19295 PF13609 Gram-negative porin C1H56_19300 PF00892 EamA-like transporter family C1H56_19305 PF00462 Glutaredoxin C1H56_19310 PF07670 Nucleoside recognition C1H56_19315 PF07670 Nucleoside recognition C1H56_19320 PF03600 Citrate transporter C1H56_19330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1H56_19330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1H56_19335 PF00730 HhH-GPD superfamily base excision DNA repair protein C1H56_19335 PF06029 AlkA N-terminal domain C1H56_19340 PF07681 DoxX C1H56_19345 PF03466 LysR substrate binding domain C1H56_19345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_19365 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1H56_19375 PF07148 Maltose operon periplasmic protein precursor (MalM) C1H56_19380 PF02264 LamB porin C1H56_19385 PF00128 Alpha amylase, catalytic domain C1H56_19385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1H56_19395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19395 PF16591 Helical bimodular sensor domain C1H56_19395 PF00672 HAMP domain C1H56_19410 PF00672 HAMP domain C1H56_19410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19420 PF00793 DAHP synthetase I family C1H56_19425 PF00005 ABC transporter C1H56_19430 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_19435 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1H56_19440 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_19445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1H56_19445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1H56_19445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1H56_19445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1H56_19455 PF04225 Opacity-associated protein A LysM-like domain C1H56_19455 PF01551 Peptidase family M23 C1H56_19465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C1H56_19465 PF02378 Phosphotransferase system, EIIC C1H56_19465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C1H56_19470 PF08125 Mannitol dehydrogenase C-terminal domain C1H56_19470 PF01232 Mannitol dehydrogenase Rossmann domain C1H56_19475 PF05068 Mannitol repressor C1H56_19480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1H56_19510 PF13460 NAD(P)H-binding C1H56_19515 PF03466 LysR substrate binding domain C1H56_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_19520 PF02743 Cache domain C1H56_19520 PF00672 HAMP domain C1H56_19520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19530 PF00106 short chain dehydrogenase C1H56_19535 PF03466 LysR substrate binding domain C1H56_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1H56_19540 PF04013 Putative SAM-dependent RNA methyltransferase C1H56_19545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1H56_19555 PF13520 Amino acid permease C1H56_19560 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C1H56_19560 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C1H56_19560 PF01276 Orn/Lys/Arg decarboxylase, major domain C1H56_19575 PF00171 Aldehyde dehydrogenase family C1H56_19580 PF01037 Lrp/AsnC ligand binding domain C1H56_19585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19585 PF00672 HAMP domain C1H56_19585 PF02743 Cache domain C1H56_19595 PF00474 Sodium:solute symporter family C1H56_19605 PF14850 DNA-binding domain of Proline dehydrogenase C1H56_19605 PF00171 Aldehyde dehydrogenase family C1H56_19605 PF01619 Proline dehydrogenase C1H56_19605 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C1H56_19610 PF12833 Helix-turn-helix domain C1H56_19620 PF03781 Sulfatase-modifying factor enzyme 1 C1H56_19625 PF00196 Bacterial regulatory proteins, luxR family C1H56_19625 PF00072 Response regulator receiver domain C1H56_19630 PF01243 Pyridoxamine 5'-phosphate oxidase C1H56_19630 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C1H56_19635 PF00529 HlyD membrane-fusion protein of T1SS C1H56_19650 PF00664 ABC transporter transmembrane region C1H56_19650 PF00005 ABC transporter C1H56_19650 PF03412 Peptidase C39 family C1H56_19660 PF00486 Transcriptional regulatory protein, C terminal C1H56_19660 PF00072 Response regulator receiver domain C1H56_19670 PF00672 HAMP domain C1H56_19670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19670 PF02743 Cache domain C1H56_19675 PF01339 CheB methylesterase C1H56_19675 PF00072 Response regulator receiver domain C1H56_19680 PF03975 CheD chemotactic sensory transduction C1H56_19685 PF01739 CheR methyltransferase, SAM binding domain C1H56_19685 PF03705 CheR methyltransferase, all-alpha domain C1H56_19690 PF02203 Tar ligand binding domain homologue C1H56_19690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1H56_19690 PF00672 HAMP domain C1H56_19695 PF01584 CheW-like domain C1H56_19700 PF01584 CheW-like domain C1H56_19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_19705 PF02895 Signal transducing histidine kinase, homodimeric domain C1H56_19705 PF09078 CheY binding C1H56_19705 PF01584 CheW-like domain C1H56_19705 PF01627 Hpt domain C1H56_19710 PF00072 Response regulator receiver domain C1H56_19725 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_19730 PF12911 N-terminal TM domain of oligopeptide transport permease C C1H56_19730 PF00528 Binding-protein-dependent transport system inner membrane component C1H56_19735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1H56_19735 PF00005 ABC transporter C1H56_19740 PF00884 Sulfatase C1H56_19740 PF08019 Phosphoethanolamine transferase EptA/EptB C1H56_19745 PF00512 His Kinase A (phospho-acceptor) domain C1H56_19745 PF08521 Two-component sensor kinase N-terminal C1H56_19745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1H56_19750 PF00486 Transcriptional regulatory protein, C terminal C1H56_19750 PF00072 Response regulator receiver domain C1H56_19770 PF00501 AMP-binding enzyme C1H56_19780 PF05127 Helicase C1H56_19780 PF13718 GNAT acetyltransferase 2 C1H56_19785 PF13416 Bacterial extracellular solute-binding protein C1H56_19790 PF02195 ParB-like nuclease domain C1H56_19790 PF08775 ParB family C1H56_19795 PF13614 AAA domain C1H56_19795 PF18607 ParA helix turn helix domain