C1H56_00005	SM00382	ATPases associated with a variety of cellular activities
C1H56_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
C1H56_00010	SM00480	DNA polymerase III beta subunit
C1H56_00020	SM00387	Histidine kinase-like ATPases
C1H56_00020	SM00433	TopoisomeraseII
C1H56_00085	SM00829	Enoylreductase
C1H56_00115	SM00382	ATPases associated with a variety of cellular activities
C1H56_00120	SM00563	Phosphate acyltransferases
C1H56_00195	SM00257	Lysin motif
C1H56_00220	SM01001	AIR carboxylase
C1H56_00280	SM00155	Phospholipase D. Active site motifs.
C1H56_00335	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C1H56_00335	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C1H56_00340	SM00649	Ribosomal protein L11/L12
C1H56_00365	SM00663	RNA polymerase I subunit A N-terminus
C1H56_00425	SM00479	C1H56_00425
C1H56_00490	SM00257	Lysin motif
C1H56_00490	SM00646	C1H56_00490
C1H56_00495	SM00853	MutL C terminal dimerisation domain
C1H56_00495	SM01340	C1H56_00495
C1H56_00515	SM00244	prohibitin homologues
C1H56_00520	SM00244	prohibitin homologues
C1H56_00535	SM00320	WD40 repeats
C1H56_00575	SM00838	Elongation factor G C-terminus
C1H56_00575	SM00889	Elongation factor G, domain IV
C1H56_00620	SM00382	ATPases associated with a variety of cellular activities
C1H56_00625	SM01005	Alanine racemase, C-terminal domain
C1H56_00760	SM01018	B12 binding domain
C1H56_00790	SM00421	helix_turn_helix, Lux Regulon
C1H56_00800	SM00052	Putative diguanylate phosphodiesterase
C1H56_00800	SM00267	diguanylate cyclase
C1H56_00820	SM00965	Secretin and TonB N terminus short domain
C1H56_00830	SM00028	Tetratricopeptide repeats
C1H56_00835	SM00382	ATPases associated with a variety of cellular activities
C1H56_00905	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_01025	SM00650	Ribosomal RNA adenine dimethylases
C1H56_01045	SM00271	DnaJ molecular chaperone homology domain
C1H56_01075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_01075	SM01049	C1H56_01075
C1H56_01110	SM00478	endonuclease III
C1H56_01110	SM00525	C1H56_01110
C1H56_01125	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_01140	SM01152	C1H56_01140
C1H56_01160	SM00382	ATPases associated with a variety of cellular activities
C1H56_01170	SM00421	helix_turn_helix, Lux Regulon
C1H56_01175	SM00363	S4 RNA-binding domain
C1H56_01180	SM00732	Likely ribonuclease with RNase H fold.
C1H56_01205	SM00731	SprT homologues.
C1H56_01215	SM00861	Transketolase, pyrimidine binding domain
C1H56_01230	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C1H56_01275	SM00420	helix_turn_helix, Deoxyribose operon repressor
C1H56_01275	SM01134	C1H56_01275
C1H56_01290	SM00563	Phosphate acyltransferases
C1H56_01440	SM00400	zinc finger
C1H56_01440	SM00493	C1H56_01440
C1H56_01440	SM00766	DNA primase DnaG DnaB-binding
C1H56_01465	SM01207	C1H56_01465
C1H56_01475	SM00905	Dihydroneopterin aldolase
C1H56_01520	SM00257	Lysin motif
C1H56_01530	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C1H56_01530	SM00534	ATPase domain of DNA mismatch repair MUTS family
C1H56_01555	SM00382	ATPases associated with a variety of cellular activities
C1H56_01565	SM00382	ATPases associated with a variety of cellular activities
C1H56_01575	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C1H56_01645	SM00829	Enoylreductase
C1H56_01670	SM01091	Transporter associated domain
C1H56_01680	SM00382	ATPases associated with a variety of cellular activities
C1H56_01680	SM00962	SRP54-type protein, GTPase domain
C1H56_01680	SM00963	SRP54-type protein, helical bundle domain
C1H56_01705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C1H56_01710	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C1H56_01760	SM00749	bacterial OsmY and nodulation domain
C1H56_01800	SM00947	Carbonic anhydrase
C1H56_01810	SM00382	ATPases associated with a variety of cellular activities
C1H56_01860	SM00487	DEAD-like helicases superfamily
C1H56_01860	SM00490	helicase superfamily c-terminal domain
C1H56_01860	SM00847	Helicase associated domain (HA2)  Add an annotation
C1H56_01885	SM00938	Nitrogen regulatory protein P-II
C1H56_01905	SM00382	ATPases associated with a variety of cellular activities
C1H56_01915	SM01068	Putative carbohydrate binding domain
C1H56_01935	SM00382	ATPases associated with a variety of cellular activities
C1H56_01940	SM00382	ATPases associated with a variety of cellular activities
C1H56_01965	SM00091	PAS domain
C1H56_01965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_01965	SM00387	Histidine kinase-like ATPases
C1H56_01965	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_01965	SM00448	cheY-homologous receiver domain
C1H56_02005	SM00363	S4 RNA-binding domain
C1H56_02025	SM01103	C1H56_02025
C1H56_02035	SM00382	ATPases associated with a variety of cellular activities
C1H56_02075	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_02075	SM00322	K homology RNA-binding domain
C1H56_02095	SM01387	C1H56_02095
C1H56_02100	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_02100	SM00322	K homology RNA-binding domain
C1H56_02105	SM00028	Tetratricopeptide repeats
C1H56_02110	SM00347	helix_turn_helix multiple antibiotic resistance protein
C1H56_02130	SM00052	Putative diguanylate phosphodiesterase
C1H56_02130	SM00091	PAS domain
C1H56_02130	SM00267	diguanylate cyclase
C1H56_02155	SM00052	Putative diguanylate phosphodiesterase
C1H56_02155	SM00267	diguanylate cyclase
C1H56_02165	SM00487	DEAD-like helicases superfamily
C1H56_02165	SM00490	helicase superfamily c-terminal domain
C1H56_02190	SM00382	ATPases associated with a variety of cellular activities
C1H56_02205	SM00927	DNA mismatch repair enzyme MutH
C1H56_02215	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C1H56_02245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C1H56_02260	SM00904	Riboflavin kinase
C1H56_02315	SM00448	cheY-homologous receiver domain
C1H56_02315	SM00850	LytTr DNA-binding domain
C1H56_02330	SM00830	Chorismate mutase type II
C1H56_02340	SM00382	ATPases associated with a variety of cellular activities
C1H56_02360	SM00052	Putative diguanylate phosphodiesterase
C1H56_02360	SM00267	diguanylate cyclase
C1H56_02370	SM00830	Chorismate mutase type II
C1H56_02385	SM00363	S4 RNA-binding domain
C1H56_02395	SM00382	ATPases associated with a variety of cellular activities
C1H56_02395	SM01086	C-terminal, D2-small domain, of ClpB protein
C1H56_02450	SM00448	cheY-homologous receiver domain
C1H56_02450	SM00862	Transcriptional regulatory protein, C terminal
C1H56_02455	SM00091	PAS domain
C1H56_02455	SM00387	Histidine kinase-like ATPases
C1H56_02455	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_02485	SM00382	ATPases associated with a variety of cellular activities
C1H56_02525	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_02545	SM01323	C1H56_02545
C1H56_02590	SM00271	DnaJ molecular chaperone homology domain
C1H56_02615	SM00562	C1H56_02615
C1H56_02625	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_02645	SM00564	beta-propeller repeat
C1H56_02650	SM00382	ATPases associated with a variety of cellular activities
C1H56_02670	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_02670	SM01240	C1H56_02670
C1H56_02680	SM00495	Chitin-binding domain type 3
C1H56_02730	SM00382	ATPases associated with a variety of cellular activities
C1H56_02745	SM00849	Metallo-beta-lactamase superfamily
C1H56_02775	SM00448	cheY-homologous receiver domain
C1H56_02780	SM00091	PAS domain
C1H56_02780	SM00387	Histidine kinase-like ATPases
C1H56_02805	SM00764	Citrate lyase ligase C-terminal domain
C1H56_02880	SM00487	DEAD-like helicases superfamily
C1H56_02880	SM00490	helicase superfamily c-terminal domain
C1H56_02890	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_02920	SM00060	Fibronectin type 3 domain
C1H56_02925	SM00247	Beta/gamma crystallins
C1H56_02940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_02945	SM00862	Transcriptional regulatory protein, C terminal
C1H56_03005	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_03015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_03015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_03040	SM01276	C1H56_03040
C1H56_03105	SM00271	DnaJ molecular chaperone homology domain
C1H56_03150	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_03160	SM01211	C1H56_03160
C1H56_03165	SM01321	C1H56_03165
C1H56_03250	SM00861	Transketolase, pyrimidine binding domain
C1H56_03275	SM00981	C1H56_03275
C1H56_03290	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C1H56_03290	SM00475	5'-3' exonuclease
C1H56_03300	SM00267	diguanylate cyclase
C1H56_03305	SM00028	Tetratricopeptide repeats
C1H56_03335	SM00382	ATPases associated with a variety of cellular activities
C1H56_03335	SM00930	C1H56_03335
C1H56_03345	SM00354	helix_turn _helix lactose operon repressor
C1H56_03355	SM00642	Alpha-amylase domain
C1H56_03390	SM00226	Low molecular weight phosphatase family
C1H56_03400	SM00984	UDP binding domain
C1H56_03455	SM00710	Parallel beta-helix repeats
C1H56_03520	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_03535	SM00936	Penicillin-binding protein 5, C-terminal domain 
C1H56_03590	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_03590	SM01091	Transporter associated domain
C1H56_03605	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_03645	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C1H56_03650	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C1H56_03650	SM00292	breast cancer carboxy-terminal domain
C1H56_03650	SM00532	Ligase N family
C1H56_03670	SM00422	helix_turn_helix, mercury resistance
C1H56_03680	SM00244	prohibitin homologues
C1H56_03725	SM00862	Transcriptional regulatory protein, C terminal
C1H56_03730	SM00387	Histidine kinase-like ATPases
C1H56_03750	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C1H56_03750	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C1H56_03825	SM00479	C1H56_03825
C1H56_03845	SM00478	endonuclease III
C1H56_03845	SM00525	C1H56_03845
C1H56_03855	SM00900	C1H56_03855
C1H56_03885	SM00487	DEAD-like helicases superfamily
C1H56_03885	SM00490	helicase superfamily c-terminal domain
C1H56_03895	SM00382	ATPases associated with a variety of cellular activities
C1H56_03895	SM00448	cheY-homologous receiver domain
C1H56_03910	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_03915	SM00852	Probable molybdopterin binding domain
C1H56_03935	SM00267	diguanylate cyclase
C1H56_03940	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_03995	SM00226	Low molecular weight phosphatase family
C1H56_04045	SM00448	cheY-homologous receiver domain
C1H56_04065	SM00382	ATPases associated with a variety of cellular activities
C1H56_04075	SM00493	C1H56_04075
C1H56_04105	SM00344	helix_turn_helix ASNC type
C1H56_04130	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_04130	SM00267	diguanylate cyclase
C1H56_04140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C1H56_04145	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C1H56_04160	SM00495	Chitin-binding domain type 3
C1H56_04160	SM00636	C1H56_04160
C1H56_04175	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_04200	SM00448	cheY-homologous receiver domain
C1H56_04205	SM00448	cheY-homologous receiver domain
C1H56_04215	SM00387	Histidine kinase-like ATPases
C1H56_04215	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_04220	SM00387	Histidine kinase-like ATPases
C1H56_04225	SM00052	Putative diguanylate phosphodiesterase
C1H56_04225	SM00448	cheY-homologous receiver domain
C1H56_04230	SM00448	cheY-homologous receiver domain
C1H56_04235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_04235	SM00387	Histidine kinase-like ATPases
C1H56_04260	SM00382	ATPases associated with a variety of cellular activities
C1H56_04265	SM00382	ATPases associated with a variety of cellular activities
C1H56_04305	SM00382	ATPases associated with a variety of cellular activities
C1H56_04310	SM00267	diguanylate cyclase
C1H56_04330	SM00382	ATPases associated with a variety of cellular activities
C1H56_04345	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_04345	SM00876	Biotin and Thiamin Synthesis associated domain
C1H56_04435	SM00528	Domain in histone-like proteins of HNS family
C1H56_04495	SM00357	Cold shock protein domain
C1H56_04505	SM00382	ATPases associated with a variety of cellular activities
C1H56_04505	SM01086	C-terminal, D2-small domain, of ClpB protein
C1H56_04560	SM00448	cheY-homologous receiver domain
C1H56_04565	SM00387	Histidine kinase-like ATPases
C1H56_04660	SM00481	DNA polymerase alpha chain like domain
C1H56_04670	SM00363	S4 RNA-binding domain
C1H56_04675	SM00382	ATPases associated with a variety of cellular activities
C1H56_04680	SM00382	ATPases associated with a variety of cellular activities
C1H56_04700	SM00267	diguanylate cyclase
C1H56_04715	SM00919	Malic enzyme, NAD binding domain
C1H56_04715	SM01274	C1H56_04715
C1H56_04740	SM00271	DnaJ molecular chaperone homology domain
C1H56_04740	SM00671	Sel1-like repeats.
C1H56_04770	SM00020	Trypsin-like serine protease
C1H56_04800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C1H56_04800	SM00866	C1H56_04800
C1H56_04815	SM00841	Elongation factor P, C-terminal
C1H56_04815	SM01185	C1H56_04815
C1H56_04825	SM00052	Putative diguanylate phosphodiesterase
C1H56_04830	SM00486	DNA polymerase type-B family
C1H56_04835	SM00421	helix_turn_helix, Lux Regulon
C1H56_04835	SM00448	cheY-homologous receiver domain
C1H56_04840	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C1H56_04840	SM00465	GIY-YIG type nucleases (URI domain)
C1H56_04870	SM00267	diguanylate cyclase
C1H56_04885	SM00873	B3/4 domain
C1H56_04885	SM00874	tRNA synthetase B5 domain
C1H56_04885	SM00896	Ferredoxin-fold anticodon binding domain
C1H56_04890	SM00411	bacterial (prokaryotic) histone like domain
C1H56_04975	SM00855	Phosphoglycerate mutase family
C1H56_04990	SM00382	ATPases associated with a variety of cellular activities
C1H56_05005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05005	SM01049	C1H56_05005
C1H56_05020	SM00852	Probable molybdopterin binding domain
C1H56_05055	SM00434	DNA Topoisomerase IV
C1H56_05060	SM00450	Rhodanese Homology Domain
C1H56_05065	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_05115	SM00849	Metallo-beta-lactamase superfamily
C1H56_05150	SM00387	Histidine kinase-like ATPases
C1H56_05150	SM01049	C1H56_05150
C1H56_05155	SM00421	helix_turn_helix, Lux Regulon
C1H56_05155	SM00448	cheY-homologous receiver domain
C1H56_05160	SM00347	helix_turn_helix multiple antibiotic resistance protein
C1H56_05170	SM00495	Chitin-binding domain type 3
C1H56_05200	SM00354	helix_turn _helix lactose operon repressor
C1H56_05215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05220	SM00479	C1H56_05220
C1H56_05225	SM00100	Cyclic nucleotide-monophosphate binding domain
C1H56_05225	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_05255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05305	SM00091	PAS domain
C1H56_05305	SM00382	ATPases associated with a variety of cellular activities
C1H56_05330	SM01005	Alanine racemase, C-terminal domain
C1H56_05335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05345	SM00387	Histidine kinase-like ATPases
C1H56_05350	SM00448	cheY-homologous receiver domain
C1H56_05365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05365	SM00387	Histidine kinase-like ATPases
C1H56_05365	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_05370	SM00448	cheY-homologous receiver domain
C1H56_05370	SM00862	Transcriptional regulatory protein, C terminal
C1H56_05400	SM00382	ATPases associated with a variety of cellular activities
C1H56_05435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C1H56_05435	SM00895	C1H56_05435
C1H56_05480	SM01321	C1H56_05480
C1H56_05510	SM00448	cheY-homologous receiver domain
C1H56_05510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_05515	SM00073	Histidine Phosphotransfer domain
C1H56_05515	SM00091	PAS domain
C1H56_05515	SM00387	Histidine kinase-like ATPases
C1H56_05515	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_05515	SM00448	cheY-homologous receiver domain
C1H56_05530	SM00267	diguanylate cyclase
C1H56_05535	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C1H56_05555	SM00382	ATPases associated with a variety of cellular activities
C1H56_05570	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_05595	SM00028	Tetratricopeptide repeats
C1H56_05595	SM00267	diguanylate cyclase
C1H56_05610	SM00267	diguanylate cyclase
C1H56_05620	SM00267	diguanylate cyclase
C1H56_05645	SM00267	diguanylate cyclase
C1H56_05645	SM01079	C1H56_05645
C1H56_05650	SM00479	C1H56_05650
C1H56_05665	SM00382	ATPases associated with a variety of cellular activities
C1H56_05665	SM00487	DEAD-like helicases superfamily
C1H56_05665	SM00490	helicase superfamily c-terminal domain
C1H56_05665	SM00847	Helicase associated domain (HA2)  Add an annotation
C1H56_05710	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05715	SM00448	cheY-homologous receiver domain
C1H56_05725	SM00073	Histidine Phosphotransfer domain
C1H56_05725	SM00260	Two component signalling adaptor domain
C1H56_05725	SM00387	Histidine kinase-like ATPases
C1H56_05725	SM01231	C1H56_05725
C1H56_05730	SM00448	cheY-homologous receiver domain
C1H56_05735	SM00138	Methyltransferase, chemotaxis proteins 
C1H56_05745	SM00448	cheY-homologous receiver domain
C1H56_05750	SM00260	Two component signalling adaptor domain
C1H56_05755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05765	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C1H56_05765	SM00091	PAS domain
C1H56_05765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05770	SM00487	DEAD-like helicases superfamily
C1H56_05770	SM00490	helicase superfamily c-terminal domain
C1H56_05795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_05795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_05875	SM00382	ATPases associated with a variety of cellular activities
C1H56_05905	SM00100	Cyclic nucleotide-monophosphate binding domain
C1H56_05905	SM00419	helix_turn_helix, cAMP Regulatory protein
C1H56_05955	SM00897	FIST N domain
C1H56_05955	SM01204	C1H56_05955
C1H56_05960	SM00387	Histidine kinase-like ATPases
C1H56_05960	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_05960	SM00448	cheY-homologous receiver domain
C1H56_05965	SM00382	ATPases associated with a variety of cellular activities
C1H56_05975	SM00382	ATPases associated with a variety of cellular activities
C1H56_06010	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_06060	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_06080	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_06115	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_06180	SM00382	ATPases associated with a variety of cellular activities
C1H56_06190	SM00981	C1H56_06190
C1H56_06385	SM00507	HNH nucleases
C1H56_06445	SM00482	DNA polymerase A domain
C1H56_06450	SM00493	C1H56_06450
C1H56_06490	SM00857	Resolvase, N terminal domain
C1H56_06505	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C1H56_06505	SM00245	tail specific protease
C1H56_06510	SM00945	ProQ/FINO family
C1H56_06520	SM00382	ATPases associated with a variety of cellular activities
C1H56_06540	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_06585	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C1H56_06620	SM00382	ATPases associated with a variety of cellular activities
C1H56_06625	SM00387	Histidine kinase-like ATPases
C1H56_06625	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_06630	SM00382	ATPases associated with a variety of cellular activities
C1H56_06630	SM00448	cheY-homologous receiver domain
C1H56_06645	SM00382	ATPases associated with a variety of cellular activities
C1H56_06655	SM00852	Probable molybdopterin binding domain
C1H56_06690	SM01144	C1H56_06690
C1H56_06700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_06790	SM00382	ATPases associated with a variety of cellular activities
C1H56_06795	SM00420	helix_turn_helix, Deoxyribose operon repressor
C1H56_06795	SM01134	C1H56_06795
C1H56_06815	SM00354	helix_turn _helix lactose operon repressor
C1H56_06835	SM00849	Metallo-beta-lactamase superfamily
C1H56_06860	SM00382	ATPases associated with a variety of cellular activities
C1H56_06900	SM01022	C1H56_06900
C1H56_06940	SM00248	ankyrin repeats
C1H56_06945	SM01060	C1H56_06945
C1H56_06970	SM00822	C1H56_06970
C1H56_06975	SM00052	Putative diguanylate phosphodiesterase
C1H56_06980	SM00267	diguanylate cyclase
C1H56_07020	SM00267	diguanylate cyclase
C1H56_07040	SM00260	Two component signalling adaptor domain
C1H56_07040	SM00448	cheY-homologous receiver domain
C1H56_07050	SM00448	cheY-homologous receiver domain
C1H56_07055	SM00387	Histidine kinase-like ATPases
C1H56_07095	SM00028	Tetratricopeptide repeats
C1H56_07095	SM00386	HAT (Half-A-TPR) repeats
C1H56_07135	SM00112	Cadherin repeats.
C1H56_07185	SM00382	ATPases associated with a variety of cellular activities
C1H56_07210	SM00363	S4 RNA-binding domain
C1H56_07215	SM00487	DEAD-like helicases superfamily
C1H56_07215	SM00490	helicase superfamily c-terminal domain
C1H56_07225	SM00448	cheY-homologous receiver domain
C1H56_07225	SM00862	Transcriptional regulatory protein, C terminal
C1H56_07230	SM00387	Histidine kinase-like ATPases
C1H56_07240	SM00052	Putative diguanylate phosphodiesterase
C1H56_07255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_07255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_07280	SM00020	Trypsin-like serine protease
C1H56_07290	SM00448	cheY-homologous receiver domain
C1H56_07295	SM00052	Putative diguanylate phosphodiesterase
C1H56_07295	SM00421	helix_turn_helix, Lux Regulon
C1H56_07295	SM00448	cheY-homologous receiver domain
C1H56_07300	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_07300	SM00073	Histidine Phosphotransfer domain
C1H56_07300	SM00387	Histidine kinase-like ATPases
C1H56_07300	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_07300	SM00448	cheY-homologous receiver domain
C1H56_07300	SM00918	Ligated ion channel L-glutamate- and glycine-binding site
C1H56_07305	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_07325	SM00382	ATPases associated with a variety of cellular activities
C1H56_07360	SM00382	ATPases associated with a variety of cellular activities
C1H56_07385	SM00155	Phospholipase D. Active site motifs.
C1H56_07430	SM00382	ATPases associated with a variety of cellular activities
C1H56_07450	SM00382	ATPases associated with a variety of cellular activities
C1H56_07455	SM00382	ATPases associated with a variety of cellular activities
C1H56_07470	SM01131	C1H56_07470
C1H56_07590	SM00052	Putative diguanylate phosphodiesterase
C1H56_07590	SM00091	PAS domain
C1H56_07595	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_07605	SM00344	helix_turn_helix ASNC type
C1H56_07635	SM00448	cheY-homologous receiver domain
C1H56_07635	SM00862	Transcriptional regulatory protein, C terminal
C1H56_07650	SM00354	helix_turn _helix lactose operon repressor
C1H56_07685	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C1H56_07685	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C1H56_07685	SM00493	C1H56_07685
C1H56_07715	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_07825	SM00487	DEAD-like helicases superfamily
C1H56_07825	SM00490	helicase superfamily c-terminal domain
C1H56_07845	SM00487	DEAD-like helicases superfamily
C1H56_07900	SM01130	C1H56_07900
C1H56_08105	SM00382	ATPases associated with a variety of cellular activities
C1H56_08140	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_08160	SM00387	Histidine kinase-like ATPases
C1H56_08160	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_08160	SM00448	cheY-homologous receiver domain
C1H56_08230	SM00382	ATPases associated with a variety of cellular activities
C1H56_08235	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C1H56_08245	SM00840	C1H56_08245
C1H56_08260	SM00052	Putative diguanylate phosphodiesterase
C1H56_08280	SM00491	C1H56_08280
C1H56_08300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_08300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_08320	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_08320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C1H56_08325	SM00382	ATPases associated with a variety of cellular activities
C1H56_08350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_08370	SM00763	PrkA AAA domain
C1H56_08400	SM00382	ATPases associated with a variety of cellular activities
C1H56_08405	SM00849	Metallo-beta-lactamase superfamily
C1H56_08420	SM00382	ATPases associated with a variety of cellular activities
C1H56_08435	SM00487	DEAD-like helicases superfamily
C1H56_08435	SM00490	helicase superfamily c-terminal domain
C1H56_08435	SM00982	C1H56_08435
C1H56_08435	SM01058	CarD-like/TRCF domain
C1H56_08490	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_08490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_08500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C1H56_08515	SM00843	C1H56_08515
C1H56_08520	SM00344	helix_turn_helix ASNC type
C1H56_08525	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C1H56_08525	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C1H56_08550	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C1H56_08555	SM00028	Tetratricopeptide repeats
C1H56_08565	SM00411	bacterial (prokaryotic) histone like domain
C1H56_08570	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_08580	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C1H56_08590	SM00411	bacterial (prokaryotic) histone like domain
C1H56_08595	SM00382	ATPases associated with a variety of cellular activities
C1H56_08595	SM00464	Found in ATP-dependent protease La (LON)
C1H56_08600	SM00382	ATPases associated with a variety of cellular activities
C1H56_08600	SM00994	ClpX C4-type zinc finger
C1H56_08600	SM01086	C-terminal, D2-small domain, of ClpB protein
C1H56_08620	SM00387	Histidine kinase-like ATPases
C1H56_08620	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_08625	SM00382	ATPases associated with a variety of cellular activities
C1H56_08625	SM00448	cheY-homologous receiver domain
C1H56_08660	SM00052	Putative diguanylate phosphodiesterase
C1H56_08660	SM00267	diguanylate cyclase
C1H56_08675	SM00563	Phosphate acyltransferases
C1H56_08750	SM00495	Chitin-binding domain type 3
C1H56_08750	SM00636	C1H56_08750
C1H56_08800	SM00978	C1H56_08800
C1H56_08810	SM00563	Phosphate acyltransferases
C1H56_08815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_08815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_08820	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_08835	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C1H56_08865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_08870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_08875	SM01144	C1H56_08875
C1H56_08890	SM00474	3'-5' exonuclease
C1H56_08920	SM00487	DEAD-like helicases superfamily
C1H56_08920	SM00491	C1H56_08920
C1H56_08950	SM00870	C1H56_08950
C1H56_08970	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C1H56_09010	SM00260	Two component signalling adaptor domain
C1H56_09010	SM00448	cheY-homologous receiver domain
C1H56_09075	SM00825	Beta-ketoacyl synthase
C1H56_09085	SM00822	C1H56_09085
C1H56_09090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C1H56_09120	SM00363	S4 RNA-binding domain
C1H56_09135	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_09165	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C1H56_09175	SM00073	Histidine Phosphotransfer domain
C1H56_09210	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C1H56_09210	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C1H56_09210	SM00493	C1H56_09210
C1H56_09280	SM00382	ATPases associated with a variety of cellular activities
C1H56_09290	SM00260	Two component signalling adaptor domain
C1H56_09295	SM00260	Two component signalling adaptor domain
C1H56_09305	SM00448	cheY-homologous receiver domain
C1H56_09310	SM00073	Histidine Phosphotransfer domain
C1H56_09310	SM00260	Two component signalling adaptor domain
C1H56_09310	SM00387	Histidine kinase-like ATPases
C1H56_09310	SM01231	C1H56_09310
C1H56_09320	SM00448	cheY-homologous receiver domain
C1H56_09335	SM00382	ATPases associated with a variety of cellular activities
C1H56_09335	SM00962	SRP54-type protein, GTPase domain
C1H56_09345	SM00855	Phosphoglycerate mutase family
C1H56_09360	SM00836	DALR anticodon binding domain
C1H56_09360	SM01016	Arginyl tRNA synthetase N terminal dom
C1H56_09380	SM00899	C1H56_09380
C1H56_09385	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_09395	SM00382	ATPases associated with a variety of cellular activities
C1H56_09405	SM00881	CoA binding domain
C1H56_09420	SM00861	Transketolase, pyrimidine binding domain
C1H56_09510	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C1H56_09520	SM00825	Beta-ketoacyl synthase
C1H56_09565	SM00463	Small MutS-related domain
C1H56_09625	SM00382	ATPases associated with a variety of cellular activities
C1H56_09650	SM00382	ATPases associated with a variety of cellular activities
C1H56_09650	SM00448	cheY-homologous receiver domain
C1H56_09655	SM00091	PAS domain
C1H56_09655	SM00387	Histidine kinase-like ATPases
C1H56_09655	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_09660	SM00382	ATPases associated with a variety of cellular activities
C1H56_09745	SM01130	C1H56_09745
C1H56_09760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_09760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_09775	SM00028	Tetratricopeptide repeats
C1H56_09835	SM00937	C1H56_09835
C1H56_09855	SM01400	C1H56_09855
C1H56_09970	SM00047	Lysozyme subfamily 2
C1H56_10015	SM00138	Methyltransferase, chemotaxis proteins 
C1H56_10020	SM00260	Two component signalling adaptor domain
C1H56_10020	SM00448	cheY-homologous receiver domain
C1H56_10025	SM00858	C1H56_10025
C1H56_10055	SM00823	Phosphopantetheine attachment site
C1H56_10095	SM01081	Putative carbohydrate binding domain
C1H56_10115	SM00463	Small MutS-related domain
C1H56_10120	SM00363	S4 RNA-binding domain
C1H56_10125	SM00267	diguanylate cyclase
C1H56_10165	SM00479	C1H56_10165
C1H56_10180	SM00849	Metallo-beta-lactamase superfamily
C1H56_10185	SM00257	Lysin motif
C1H56_10195	SM00938	Nitrogen regulatory protein P-II
C1H56_10210	SM00977	TilS substrate C-terminal domain
C1H56_10220	SM00481	DNA polymerase alpha chain like domain
C1H56_10250	SM00935	Outer membrane protein (OmpH-like)
C1H56_10260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C1H56_10305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_10365	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C1H56_10415	SM00267	diguanylate cyclase
C1H56_10455	SM00900	C1H56_10455
C1H56_10510	SM00464	Found in ATP-dependent protease La (LON)
C1H56_10545	SM00925	MltA specific insert domain
C1H56_10630	SM00354	helix_turn _helix lactose operon repressor
C1H56_10635	SM01038	Beta galactosidase small chain
C1H56_10655	SM00838	Elongation factor G C-terminus
C1H56_10655	SM00889	Elongation factor G, domain IV
C1H56_10660	SM00382	ATPases associated with a variety of cellular activities
C1H56_10695	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
C1H56_10700	SM01133	C1H56_10700
C1H56_10740	SM00986	Uracil DNA glycosylase superfamily
C1H56_10740	SM00987	UreE urease accessory protein, C-terminal domain 
C1H56_10745	SM00518	AP endonuclease family 2
C1H56_10790	SM00448	cheY-homologous receiver domain
C1H56_10790	SM00862	Transcriptional regulatory protein, C terminal
C1H56_10795	SM00073	Histidine Phosphotransfer domain
C1H56_10795	SM00091	PAS domain
C1H56_10795	SM00387	Histidine kinase-like ATPases
C1H56_10795	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_10795	SM00448	cheY-homologous receiver domain
C1H56_10800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C1H56_10800	SM00091	PAS domain
C1H56_10800	SM00267	diguanylate cyclase
C1H56_10805	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_10870	SM00382	ATPases associated with a variety of cellular activities
C1H56_10875	SM00507	HNH nucleases
C1H56_10890	SM00851	MGS-like domain
C1H56_10890	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C1H56_10895	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C1H56_10915	SM00957	SecA DEAD-like domain
C1H56_10915	SM00958	SecA preprotein cross-linking domain
C1H56_10930	SM00864	Tubulin/FtsZ family, GTPase domain
C1H56_10930	SM00865	Tubulin/FtsZ family, C-terminal domain
C1H56_10935	SM00842	Cell division protein FtsA
C1H56_11015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C1H56_11015	SM00895	C1H56_11015
C1H56_11050	SM00644	C1H56_11050
C1H56_11095	SM00434	DNA Topoisomerase IV
C1H56_11100	SM00387	Histidine kinase-like ATPases
C1H56_11100	SM00433	TopoisomeraseII
C1H56_11140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_11140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_11145	SM00880	C1H56_11145
C1H56_11145	SM01118	C1H56_11145
C1H56_11160	SM00287	Bacterial SH3 domain homologues
C1H56_11170	SM00382	ATPases associated with a variety of cellular activities
C1H56_11180	SM01192	C1H56_11180
C1H56_11180	SM01193	C1H56_11180
C1H56_11195	SM00954	Region found in RelA / SpoT proteins
C1H56_11205	SM00073	Histidine Phosphotransfer domain
C1H56_11205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_11205	SM00387	Histidine kinase-like ATPases
C1H56_11205	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_11205	SM00448	cheY-homologous receiver domain
C1H56_11210	SM00267	diguanylate cyclase
C1H56_11245	SM00358	Double-stranded RNA binding motif
C1H56_11245	SM00535	Ribonuclease III family
C1H56_11375	SM00014	Acid phosphatase homologues
C1H56_11385	SM00917	LeuA allosteric (dimerisation) domain
C1H56_11390	SM01329	C1H56_11390
C1H56_11445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_11495	SM00487	DEAD-like helicases superfamily
C1H56_11495	SM00490	helicase superfamily c-terminal domain
C1H56_11505	SM00670	Large family of predicted nucleotide-binding domains
C1H56_11530	SM00563	Phosphate acyltransferases
C1H56_11565	SM00382	ATPases associated with a variety of cellular activities
C1H56_11580	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_11600	SM00382	ATPases associated with a variety of cellular activities
C1H56_11630	SM00924	MgtE intracellular N domain
C1H56_11645	SM00382	ATPases associated with a variety of cellular activities
C1H56_11720	SM00382	ATPases associated with a variety of cellular activities
C1H56_11770	SM00487	DEAD-like helicases superfamily
C1H56_11770	SM00490	helicase superfamily c-terminal domain
C1H56_11805	SM00662	RNA polymerases D
C1H56_11810	SM00363	S4 RNA-binding domain
C1H56_11810	SM01390	C1H56_11810
C1H56_11875	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C1H56_11880	SM01374	C1H56_11880
C1H56_11900	SM00322	K homology RNA-binding domain
C1H56_11915	SM01382	C1H56_11915
C1H56_11915	SM01383	C1H56_11915
C1H56_11935	SM01403	C1H56_11935
C1H56_11940	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C1H56_11945	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_11945	SM00357	Cold shock protein domain
C1H56_11945	SM00955	C1H56_11945
C1H56_11955	SM00671	Sel1-like repeats.
C1H56_11965	SM00788	Adenylosuccinate synthetase
C1H56_11995	SM00382	ATPases associated with a variety of cellular activities
C1H56_12020	SM00100	Cyclic nucleotide-monophosphate binding domain
C1H56_12020	SM00419	helix_turn_helix, cAMP Regulatory protein
C1H56_12025	SM01150	C1H56_12025
C1H56_12050	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_12100	SM00965	Secretin and TonB N terminus short domain
C1H56_12170	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C1H56_12190	SM00971	Serine acetyltransferase, N-terminal
C1H56_12205	SM00450	Rhodanese Homology Domain
C1H56_12235	SM00841	Elongation factor P, C-terminal
C1H56_12235	SM01185	C1H56_12235
C1H56_12255	SM00883	Chaperonin 10 Kd subunit
C1H56_12305	SM00382	ATPases associated with a variety of cellular activities
C1H56_12305	SM01086	C-terminal, D2-small domain, of ClpB protein
C1H56_12320	SM00354	helix_turn _helix lactose operon repressor
C1H56_12325	SM00487	DEAD-like helicases superfamily
C1H56_12325	SM00490	helicase superfamily c-terminal domain
C1H56_12335	SM00919	Malic enzyme, NAD binding domain
C1H56_12335	SM01274	C1H56_12335
C1H56_12385	SM00448	cheY-homologous receiver domain
C1H56_12385	SM00862	Transcriptional regulatory protein, C terminal
C1H56_12390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_12390	SM00387	Histidine kinase-like ATPases
C1H56_12390	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_12410	SM00267	diguanylate cyclase
C1H56_12435	SM00421	helix_turn_helix, Lux Regulon
C1H56_12435	SM00448	cheY-homologous receiver domain
C1H56_12440	SM01091	Transporter associated domain
C1H56_12460	SM00072	Guanylate kinase homologues.
C1H56_12465	SM01409	C1H56_12465
C1H56_12470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_12470	SM00954	Region found in RelA / SpoT proteins
C1H56_12475	SM00487	DEAD-like helicases superfamily
C1H56_12475	SM00490	helicase superfamily c-terminal domain
C1H56_12485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_12485	SM00387	Histidine kinase-like ATPases
C1H56_12485	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_12490	SM00448	cheY-homologous receiver domain
C1H56_12490	SM00862	Transcriptional regulatory protein, C terminal
C1H56_12500	SM00316	Ribosomal protein S1-like RNA-binding domain
C1H56_12500	SM00732	Likely ribonuclease with RNase H fold.
C1H56_12580	SM00382	ATPases associated with a variety of cellular activities
C1H56_12595	SM00363	S4 RNA-binding domain
C1H56_12645	SM01230	C1H56_12645
C1H56_12655	SM00091	PAS domain
C1H56_12655	SM00387	Histidine kinase-like ATPases
C1H56_12655	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_12660	SM00382	ATPases associated with a variety of cellular activities
C1H56_12660	SM00448	cheY-homologous receiver domain
C1H56_12665	SM00052	Putative diguanylate phosphodiesterase
C1H56_12665	SM00267	diguanylate cyclase
C1H56_12735	SM00360	RNA recognition motif
C1H56_12790	SM00382	ATPases associated with a variety of cellular activities
C1H56_12795	SM00382	ATPases associated with a variety of cellular activities
C1H56_12795	SM00962	SRP54-type protein, GTPase domain
C1H56_12795	SM00963	SRP54-type protein, helical bundle domain
C1H56_12875	SM01144	C1H56_12875
C1H56_12880	SM00052	Putative diguanylate phosphodiesterase
C1H56_12880	SM00267	diguanylate cyclase
C1H56_12880	SM00897	FIST N domain
C1H56_12880	SM01204	C1H56_12880
C1H56_12915	SM01219	C1H56_12915
C1H56_12950	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_12980	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C1H56_12980	SM00474	3'-5' exonuclease
C1H56_12980	SM00475	5'-3' exonuclease
C1H56_12980	SM00482	DNA polymerase A domain
C1H56_12990	SM01004	Delta-aminolevulinic acid dehydratase
C1H56_13005	SM00450	Rhodanese Homology Domain
C1H56_13015	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C1H56_13015	SM00091	PAS domain
C1H56_13015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_13040	SM00563	Phosphate acyltransferases
C1H56_13150	SM00052	Putative diguanylate phosphodiesterase
C1H56_13150	SM00091	PAS domain
C1H56_13150	SM00267	diguanylate cyclase
C1H56_13155	SM00344	helix_turn_helix ASNC type
C1H56_13180	SM00876	Biotin and Thiamin Synthesis associated domain
C1H56_13270	SM00357	Cold shock protein domain
C1H56_13270	SM00382	ATPases associated with a variety of cellular activities
C1H56_13270	SM00959	Rho termination factor, N-terminal domain
C1H56_13280	SM00487	DEAD-like helicases superfamily
C1H56_13280	SM00490	helicase superfamily c-terminal domain
C1H56_13290	SM00387	Histidine kinase-like ATPases
C1H56_13290	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_13290	SM00448	cheY-homologous receiver domain
C1H56_13310	SM00479	C1H56_13310
C1H56_13330	SM00878	Biotin carboxylase C-terminal domain
C1H56_13350	SM00354	helix_turn _helix lactose operon repressor
C1H56_13390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_13390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_13390	SM01049	C1H56_13390
C1H56_13405	SM00862	Transcriptional regulatory protein, C terminal
C1H56_13410	SM00422	helix_turn_helix, mercury resistance
C1H56_13420	SM00798	AICARFT/IMPCHase bienzyme
C1H56_13420	SM00851	MGS-like domain
C1H56_13425	SM01209	C1H56_13425
C1H56_13425	SM01210	C1H56_13425
C1H56_13435	SM00411	bacterial (prokaryotic) histone like domain
C1H56_13465	SM00986	Uracil DNA glycosylase superfamily
C1H56_13465	SM00987	UreE urease accessory protein, C-terminal domain 
C1H56_13475	SM00849	Metallo-beta-lactamase superfamily
C1H56_13475	SM01027	Beta-Casp domain
C1H56_13545	SM00382	ATPases associated with a variety of cellular activities
C1H56_13670	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C1H56_13670	SM01232	C1H56_13670
C1H56_13695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_13695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_13695	SM01049	C1H56_13695
C1H56_13775	SM00382	ATPases associated with a variety of cellular activities
C1H56_13785	SM00382	ATPases associated with a variety of cellular activities
C1H56_13800	SM00341	Helicase and RNase D C-terminal
C1H56_13800	SM00487	DEAD-like helicases superfamily
C1H56_13800	SM00490	helicase superfamily c-terminal domain
C1H56_13800	SM00956	C1H56_13800
C1H56_13815	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_13915	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_13950	SM00382	ATPases associated with a variety of cellular activities
C1H56_14115	SM00382	ATPases associated with a variety of cellular activities
C1H56_14155	SM00470	ParB-like nuclease domain
C1H56_14170	SM01228	C1H56_14170
C1H56_14195	SM01234	C1H56_14195
C1H56_14210	SM00382	ATPases associated with a variety of cellular activities
C1H56_14220	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_14255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_14255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_14255	SM01049	C1H56_14255
C1H56_14270	SM00421	helix_turn_helix, Lux Regulon
C1H56_14285	SM00642	Alpha-amylase domain
C1H56_14345	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
C1H56_14345	SM00495	Chitin-binding domain type 3
C1H56_14345	SM00636	C1H56_14345
C1H56_14365	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_14365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_14385	SM00014	Acid phosphatase homologues
C1H56_14430	SM00245	tail specific protease
C1H56_14445	SM00267	diguanylate cyclase
C1H56_14450	SM00028	Tetratricopeptide repeats
C1H56_14475	SM00422	helix_turn_helix, mercury resistance
C1H56_14485	SM00257	Lysin motif
C1H56_14495	SM00487	DEAD-like helicases superfamily
C1H56_14495	SM00490	helicase superfamily c-terminal domain
C1H56_14525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_14525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_14545	SM00382	ATPases associated with a variety of cellular activities
C1H56_14550	SM00267	diguanylate cyclase
C1H56_14585	SM00052	Putative diguanylate phosphodiesterase
C1H56_14585	SM00267	diguanylate cyclase
C1H56_14600	SM00422	helix_turn_helix, mercury resistance
C1H56_14675	SM00450	Rhodanese Homology Domain
C1H56_14680	SM00052	Putative diguanylate phosphodiesterase
C1H56_14755	SM00382	ATPases associated with a variety of cellular activities
C1H56_14755	SM01086	C-terminal, D2-small domain, of ClpB protein
C1H56_14760	SM00382	ATPases associated with a variety of cellular activities
C1H56_14810	SM00382	ATPases associated with a variety of cellular activities
C1H56_14830	SM00354	helix_turn _helix lactose operon repressor
C1H56_14850	SM00100	Cyclic nucleotide-monophosphate binding domain
C1H56_14870	SM00495	Chitin-binding domain type 3
C1H56_14875	SM00091	PAS domain
C1H56_14875	SM00387	Histidine kinase-like ATPases
C1H56_14875	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_14880	SM00382	ATPases associated with a variety of cellular activities
C1H56_14880	SM00448	cheY-homologous receiver domain
C1H56_14985	SM00267	diguanylate cyclase
C1H56_14990	SM00357	Cold shock protein domain
C1H56_15005	SM00028	Tetratricopeptide repeats
C1H56_15010	SM00327	von Willebrand factor (vWF) type A domain
C1H56_15030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_15030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_15060	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C1H56_15060	SM00382	ATPases associated with a variety of cellular activities
C1H56_15070	SM00357	Cold shock protein domain
C1H56_15090	SM00448	cheY-homologous receiver domain
C1H56_15130	SM01240	C1H56_15130
C1H56_15155	SM01321	C1H56_15155
C1H56_15170	SM00487	DEAD-like helicases superfamily
C1H56_15170	SM00490	helicase superfamily c-terminal domain
C1H56_15195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_15200	SM00387	Histidine kinase-like ATPases
C1H56_15225	SM00267	diguanylate cyclase
C1H56_15235	SM00458	Ricin-type beta-trefoil
C1H56_15240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_15240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_15255	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
C1H56_15285	SM00382	ATPases associated with a variety of cellular activities
C1H56_15290	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_15320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_15320	SM00387	Histidine kinase-like ATPases
C1H56_15320	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_15325	SM00448	cheY-homologous receiver domain
C1H56_15325	SM00862	Transcriptional regulatory protein, C terminal
C1H56_15340	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C1H56_15350	SM01007	Class II Aldolase and Adducin N-terminal domain
C1H56_15365	SM00420	helix_turn_helix, Deoxyribose operon repressor
C1H56_15365	SM01134	C1H56_15365
C1H56_15380	SM00642	Alpha-amylase domain
C1H56_15405	SM00448	cheY-homologous receiver domain
C1H56_15405	SM00862	Transcriptional regulatory protein, C terminal
C1H56_15410	SM00387	Histidine kinase-like ATPases
C1H56_15410	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_15435	SM00422	helix_turn_helix, mercury resistance
C1H56_15445	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_15455	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_15455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_15465	SM00936	Penicillin-binding protein 5, C-terminal domain 
C1H56_15480	SM01057	Eukaryotic-type carbonic anhydrase
C1H56_15485	SM01321	C1H56_15485
C1H56_15510	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_15550	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C1H56_15670	SM00507	HNH nucleases
C1H56_15675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_16210	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_16855	SM01321	C1H56_16855
C1H56_16980	SM00354	helix_turn _helix lactose operon repressor
C1H56_16995	SM00387	Histidine kinase-like ATPases
C1H56_16995	SM00448	cheY-homologous receiver domain
C1H56_17020	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C1H56_17035	SM00890	Domain of unknown function
C1H56_17040	SM00387	Histidine kinase-like ATPases
C1H56_17040	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_17045	SM00448	cheY-homologous receiver domain
C1H56_17045	SM00862	Transcriptional regulatory protein, C terminal
C1H56_17065	SM00052	Putative diguanylate phosphodiesterase
C1H56_17080	SM00867	YceI-like domain 
C1H56_17085	SM00116	Domain in cystathionine beta-synthase and other proteins.
C1H56_17120	SM00782	PhnA Zinc-Ribbon
C1H56_17155	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_17155	SM00267	diguanylate cyclase
C1H56_17175	SM00267	diguanylate cyclase
C1H56_17190	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C1H56_17190	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C1H56_17200	SM00387	Histidine kinase-like ATPases
C1H56_17200	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_17205	SM00448	cheY-homologous receiver domain
C1H56_17205	SM00862	Transcriptional regulatory protein, C terminal
C1H56_17245	SM00881	CoA binding domain
C1H56_17315	SM00382	ATPases associated with a variety of cellular activities
C1H56_17365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C1H56_17365	SM00866	C1H56_17365
C1H56_17375	SM00382	ATPases associated with a variety of cellular activities
C1H56_17440	SM00852	Probable molybdopterin binding domain
C1H56_17455	SM00450	Rhodanese Homology Domain
C1H56_17475	SM00861	Transketolase, pyrimidine binding domain
C1H56_17565	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C1H56_17575	SM00450	Rhodanese Homology Domain
C1H56_17585	SM00563	Phosphate acyltransferases
C1H56_17625	SM00354	helix_turn _helix lactose operon repressor
C1H56_17630	SM00640	Glycosyl hydrolases family 32
C1H56_17645	SM00091	PAS domain
C1H56_17645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_17665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_17665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_17700	SM00354	helix_turn _helix lactose operon repressor
C1H56_17705	SM00421	helix_turn_helix, Lux Regulon
C1H56_17705	SM00448	cheY-homologous receiver domain
C1H56_17710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_17710	SM00387	Histidine kinase-like ATPases
C1H56_17725	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C1H56_17745	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_17750	SM00421	helix_turn_helix, Lux Regulon
C1H56_17750	SM00448	cheY-homologous receiver domain
C1H56_17755	SM00387	Histidine kinase-like ATPases
C1H56_17775	SM00382	ATPases associated with a variety of cellular activities
C1H56_17795	SM00822	C1H56_17795
C1H56_17820	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C1H56_17820	SM00267	diguanylate cyclase
C1H56_17830	SM00495	Chitin-binding domain type 3
C1H56_17830	SM00636	C1H56_17830
C1H56_17845	SM00448	cheY-homologous receiver domain
C1H56_17850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_17850	SM00387	Histidine kinase-like ATPases
C1H56_17850	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_17870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_17870	SM00387	Histidine kinase-like ATPases
C1H56_17870	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_17870	SM00448	cheY-homologous receiver domain
C1H56_17880	SM00851	MGS-like domain
C1H56_17915	SM00387	Histidine kinase-like ATPases
C1H56_17920	SM00989	C1H56_17920
C1H56_17940	SM00382	ATPases associated with a variety of cellular activities
C1H56_18000	SM00387	Histidine kinase-like ATPases
C1H56_18000	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_18000	SM00448	cheY-homologous receiver domain
C1H56_18120	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_18120	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C1H56_18125	SM00382	ATPases associated with a variety of cellular activities
C1H56_18135	SM00327	von Willebrand factor (vWF) type A domain
C1H56_18140	SM00382	ATPases associated with a variety of cellular activities
C1H56_18165	SM00487	DEAD-like helicases superfamily
C1H56_18165	SM00490	helicase superfamily c-terminal domain
C1H56_18185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_18185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_18205	SM00796	Allophanate hydrolase subunit 1
C1H56_18210	SM00797	Allophanate hydrolase subunit 2
C1H56_18220	SM00984	UDP binding domain
C1H56_18230	SM00382	ATPases associated with a variety of cellular activities
C1H56_18245	SM00052	Putative diguanylate phosphodiesterase
C1H56_18245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C1H56_18245	SM00267	diguanylate cyclase
C1H56_18260	SM00271	DnaJ molecular chaperone homology domain
C1H56_18290	SM00857	Resolvase, N terminal domain
C1H56_18325	SM00020	Trypsin-like serine protease
C1H56_18330	SM00487	DEAD-like helicases superfamily
C1H56_18330	SM00490	helicase superfamily c-terminal domain
C1H56_18335	SM00357	Cold shock protein domain
C1H56_18335	SM00955	C1H56_18335
C1H56_18390	SM00924	MgtE intracellular N domain
C1H56_18395	SM00883	Chaperonin 10 Kd subunit
C1H56_18480	SM01266	C1H56_18480
C1H56_18485	SM01091	Transporter associated domain
C1H56_18500	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C1H56_18520	SM00267	diguanylate cyclase
C1H56_18530	SM00448	cheY-homologous receiver domain
C1H56_18530	SM00850	LytTr DNA-binding domain
C1H56_18535	SM00387	Histidine kinase-like ATPases
C1H56_18555	SM00382	ATPases associated with a variety of cellular activities
C1H56_18575	SM00642	Alpha-amylase domain
C1H56_18595	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C1H56_18595	SM00091	PAS domain
C1H56_18595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_18625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C1H56_18710	SM00829	Enoylreductase
C1H56_18730	SM00421	helix_turn_helix, Lux Regulon
C1H56_18760	SM00481	DNA polymerase alpha chain like domain
C1H56_18765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_18780	SM01350	C1H56_18780
C1H56_18790	SM00849	Metallo-beta-lactamase superfamily
C1H56_18820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_18820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_18835	SM00729	Elongator protein 3, MiaB family, Radical SAM
C1H56_18865	SM00382	ATPases associated with a variety of cellular activities
C1H56_18895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_18895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_18915	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_18940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C1H56_18945	SM00357	Cold shock protein domain
C1H56_18965	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_18975	SM00091	PAS domain
C1H56_18975	SM00267	diguanylate cyclase
C1H56_18980	SM00420	helix_turn_helix, Deoxyribose operon repressor
C1H56_18980	SM01134	C1H56_18980
C1H56_19010	SM00382	ATPases associated with a variety of cellular activities
C1H56_19025	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C1H56_19035	SM00421	helix_turn_helix, Lux Regulon
C1H56_19045	SM00260	Two component signalling adaptor domain
C1H56_19045	SM00448	cheY-homologous receiver domain
C1H56_19050	SM00347	helix_turn_helix multiple antibiotic resistance protein
C1H56_19055	SM00267	diguanylate cyclase
C1H56_19065	SM00530	Helix-turn-helix XRE-family like proteins 
C1H56_19075	SM00267	diguanylate cyclase
C1H56_19075	SM01079	C1H56_19075
C1H56_19100	SM00267	diguanylate cyclase
C1H56_19135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_19150	SM00382	ATPases associated with a variety of cellular activities
C1H56_19155	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_19160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19215	SM00487	DEAD-like helicases superfamily
C1H56_19215	SM00490	helicase superfamily c-terminal domain
C1H56_19240	SM00382	ATPases associated with a variety of cellular activities
C1H56_19265	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_19285	SM00347	helix_turn_helix multiple antibiotic resistance protein
C1H56_19335	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_19335	SM01009	AlkA N-terminal domain
C1H56_19355	SM01154	C1H56_19355
C1H56_19370	SM00671	Sel1-like repeats.
C1H56_19385	SM00642	Alpha-amylase domain
C1H56_19395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_19410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_19425	SM00382	ATPases associated with a variety of cellular activities
C1H56_19435	SM00062	Bacterial periplasmic substrate-binding proteins
C1H56_19485	SM00849	Metallo-beta-lactamase superfamily
C1H56_19505	SM00450	Rhodanese Homology Domain
C1H56_19520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_19580	SM00344	helix_turn_helix ASNC type
C1H56_19585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_19610	SM00342	helix_turn_helix, arabinose operon control protein
C1H56_19625	SM00421	helix_turn_helix, Lux Regulon
C1H56_19645	SM00052	Putative diguanylate phosphodiesterase
C1H56_19645	SM00267	diguanylate cyclase
C1H56_19650	SM00382	ATPases associated with a variety of cellular activities
C1H56_19660	SM00331	Sigma factor PP2C-like phosphatases
C1H56_19660	SM00448	cheY-homologous receiver domain
C1H56_19670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19675	SM00448	cheY-homologous receiver domain
C1H56_19685	SM00138	Methyltransferase, chemotaxis proteins 
C1H56_19690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C1H56_19690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C1H56_19695	SM00260	Two component signalling adaptor domain
C1H56_19700	SM00260	Two component signalling adaptor domain
C1H56_19705	SM00073	Histidine Phosphotransfer domain
C1H56_19705	SM00260	Two component signalling adaptor domain
C1H56_19705	SM00387	Histidine kinase-like ATPases
C1H56_19705	SM01231	C1H56_19705
C1H56_19710	SM00448	cheY-homologous receiver domain
C1H56_19735	SM00382	ATPases associated with a variety of cellular activities
C1H56_19745	SM00387	Histidine kinase-like ATPases
C1H56_19745	SM00388	His Kinase A (phosphoacceptor) domain
C1H56_19750	SM00448	cheY-homologous receiver domain
C1H56_19750	SM00862	Transcriptional regulatory protein, C terminal
C1H56_19760	SM00822	C1H56_19760
C1H56_19765	SM01236	C1H56_19765
C1H56_19790	SM00470	ParB-like nuclease domain
