locus-tag class description HND97_00020 PF00543 Nitrogen regulatory protein P-II HND97_00050 PF01336 OB-fold nucleic acid binding domain HND97_00050 PF02811 PHP domain HND97_00050 PF14579 Helix-hairpin-helix motif HND97_00050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HND97_00050 PF07733 Bacterial DNA polymerase III alpha NTPase domain HND97_00105 PF17820 PDZ domain HND97_00105 PF02163 Peptidase family M50 HND97_00110 PF02163 Peptidase family M50 HND97_00110 PF17820 PDZ domain HND97_00225 PF00156 Phosphoribosyl transferase domain HND97_00715 PF01925 Sulfite exporter TauE/SafE HND97_00765 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HND97_00865 PF17768 RecJ OB domain HND97_00865 PF02272 DHHA1 domain HND97_00865 PF01368 DHH family HND97_00870 PF02272 DHHA1 domain HND97_00870 PF01368 DHH family HND97_00870 PF17768 RecJ OB domain HND97_00875 PF01368 DHH family HND97_00875 PF02272 DHHA1 domain HND97_00875 PF17768 RecJ OB domain HND97_00880 PF17768 RecJ OB domain HND97_00880 PF01368 DHH family HND97_00880 PF02272 DHHA1 domain HND97_01360 PF02562 PhoH-like protein HND97_01360 PF13638 PIN domain HND97_01445 PF03968 OstA-like protein HND97_01475 PF00381 PTS HPr component phosphorylation site HND97_01525 PF00719 Inorganic pyrophosphatase HND97_01565 PF10795 Protein of unknown function (DUF2607) HND97_01600 PF00009 Elongation factor Tu GTP binding domain HND97_01625 PF00271 Helicase conserved C-terminal domain HND97_01625 PF00270 DEAD/DEAH box helicase HND97_01625 PF03880 DbpA RNA binding domain HND97_01670 PF00411 Ribosomal protein S11 HND97_01675 PF00416 Ribosomal protein S13/S18 HND97_01680 PF00416 Ribosomal protein S13/S18 HND97_01685 PF00444 Ribosomal protein L36 HND97_01700 PF00327 Ribosomal protein L30p/L7e HND97_01715 PF00347 Ribosomal protein L6 HND97_01740 PF00238 Ribosomal protein L14p/L23e HND97_01745 PF00366 Ribosomal protein S17 HND97_01750 PF00831 Ribosomal L29 protein HND97_01765 PF00237 Ribosomal protein L22p/L17e HND97_01770 PF00203 Ribosomal protein S19 HND97_01840 PF02254 TrkA-N domain HND97_01840 PF00999 Sodium/hydrogen exchanger family HND97_01845 PF00999 Sodium/hydrogen exchanger family HND97_01845 PF02254 TrkA-N domain HND97_01850 PF00999 Sodium/hydrogen exchanger family HND97_01850 PF02254 TrkA-N domain HND97_01875 PF06794 Uncharacterised protein family (UPF0270) HND97_02085 PF13085 2Fe-2S iron-sulfur cluster binding domain HND97_02085 PF13183 4Fe-4S dicluster domain HND97_02095 PF02313 Fumarate reductase subunit D HND97_02160 PF03737 Aldolase/RraA HND97_02195 PF01197 Ribosomal protein L31 HND97_02340 PF00625 Guanylate kinase HND97_02370 PF00072 Response regulator receiver domain HND97_02370 PF00486 Transcriptional regulatory protein, C terminal HND97_02375 PF00072 Response regulator receiver domain HND97_02375 PF00486 Transcriptional regulatory protein, C terminal HND97_02440 PF00156 Phosphoribosyl transferase domain HND97_02955 PF02416 mttA/Hcf106 family HND97_03245 PF13335 Magnesium chelatase, subunit ChlI C-terminal HND97_03245 PF01078 Magnesium chelatase, subunit ChlI HND97_03370 PF00468 Ribosomal protein L34 HND97_03435 PF00430 ATP synthase B/B' CF(0) HND97_03470 PF07690 Major Facilitator Superfamily HND97_03475 PF07690 Major Facilitator Superfamily HND97_03480 PF07690 Major Facilitator Superfamily HND97_03650 PF04380 Membrane fusogenic activity HND97_03740 PF01432 Peptidase family M3 HND97_03745 PF01432 Peptidase family M3 HND97_03885 PF04002 RadC-like JAB domain HND97_03955 PF02743 Cache domain HND97_03955 PF00672 HAMP domain HND97_03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HND97_03965 PF04002 RadC-like JAB domain HND97_03975 PF00471 Ribosomal protein L33 HND97_04115 PF00535 Glycosyl transferase family 2 HND97_04125 PF02350 UDP-N-acetylglucosamine 2-epimerase HND97_04165 PF02397 Bacterial sugar transferase HND97_04220 PF00216 Bacterial DNA-binding protein HND97_04335 PF00364 Biotin-requiring enzyme HND97_04360 PF12832 MFS_1 like family HND97_04400 PF00085 Thioredoxin HND97_04680 PF17209 Hfq protein HND97_04740 PF00164 Ribosomal protein S12/S23 HND97_04770 PF01250 Ribosomal protein S6 HND97_04780 PF01084 Ribosomal protein S18 HND97_04825 PF01475 Ferric uptake regulator family HND97_05150 PF01016 Ribosomal L27 protein HND97_05160 PF01018 GTP1/OBG HND97_05160 PF01926 50S ribosome-binding GTPase HND97_05340 PF03652 Holliday junction resolvase HND97_05355 PF04452 RNA methyltransferase HND97_05490 PF02660 Glycerol-3-phosphate acyltransferase HND97_05500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HND97_05580 PF02464 Competence-damaged protein HND97_05600 PF00696 Amino acid kinase family HND97_05600 PF13840 ACT domain HND97_05605 PF00696 Amino acid kinase family HND97_05605 PF01842 ACT domain HND97_05605 PF13840 ACT domain HND97_05785 PF04972 BON domain HND97_06000 PF01521 Iron-sulphur cluster biosynthesis HND97_06020 PF01479 S4 domain HND97_06020 PF00579 tRNA synthetases class I (W and Y) HND97_06025 PF00579 tRNA synthetases class I (W and Y) HND97_06025 PF01479 S4 domain HND97_06105 PF02033 Ribosome-binding factor A HND97_06270 PF01022 Bacterial regulatory protein, arsR family HND97_06275 PF01649 Ribosomal protein S20 HND97_06390 PF00563 EAL domain HND97_06390 PF00990 Diguanylate cyclase, GGDEF domain HND97_06455 PF00881 Nitroreductase family HND97_06555 PF02547 Queuosine biosynthesis protein HND97_06600 PF01592 NifU-like N terminal domain HND97_06620 PF00111 2Fe-2S iron-sulfur cluster binding domain HND97_06805 PF04277 Oxaloacetate decarboxylase, gamma chain HND97_06945 PF03658 RnfH family Ubiquitin HND97_07020 PF02769 AIR synthase related protein, C-terminal domain HND97_07020 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HND97_07020 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HND97_07065 PF00444 Ribosomal protein L36 HND97_07120 PF02609 Exonuclease VII small subunit HND97_07250 PF01451 Low molecular weight phosphotyrosine protein phosphatase HND97_07290 PF00534 Glycosyl transferases group 1 HND97_07290 PF13439 Glycosyltransferase Family 4 HND97_07405 PF04359 Protein of unknown function (DUF493) HND97_07495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HND97_07895 PF04304 Protein of unknown function (DUF454) HND97_08125 PF07085 DRTGG domain HND97_08125 PF01515 Phosphate acetyl/butaryl transferase HND97_08150 PF02653 Branched-chain amino acid transport system / permease component HND97_08260 PF16036 Chalcone isomerase-like HND97_08350 PF00313 'Cold-shock' DNA-binding domain HND97_08510 PF08056 Tryptophan operon leader peptide HND97_08560 PF02698 DUF218 domain HND97_08835 PF01032 FecCD transport family HND97_08855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HND97_08855 PF00672 HAMP domain HND97_08900 PF00970 Oxidoreductase FAD-binding domain HND97_08900 PF00111 2Fe-2S iron-sulfur cluster binding domain HND97_08900 PF00175 Oxidoreductase NAD-binding domain HND97_09430 PF01027 Inhibitor of apoptosis-promoting Bax1 HND97_09435 PF01027 Inhibitor of apoptosis-promoting Bax1 HND97_09470 PF04055 Radical SAM superfamily HND97_09650 PF05638 Type VI secretion system effector, Hcp HND97_09700 PF00528 Binding-protein-dependent transport system inner membrane component HND97_09710 PF08402 TOBE domain HND97_09710 PF00005 ABC transporter HND97_09715 PF08402 TOBE domain HND97_09715 PF00005 ABC transporter HND97_09830 PF07634 RtxA repeat HND97_09830 PF11713 Peptidase C80 family HND97_09830 PF11647 Membrane Localization Domain HND97_09830 PF12146 Serine aminopeptidase, S33 HND97_09830 PF16671 Actin cross-linking domain HND97_09835 PF11647 Membrane Localization Domain HND97_09835 PF07634 RtxA repeat HND97_09835 PF16671 Actin cross-linking domain HND97_09835 PF12146 Serine aminopeptidase, S33 HND97_09835 PF11713 Peptidase C80 family HND97_09840 PF16671 Actin cross-linking domain HND97_09840 PF07634 RtxA repeat HND97_09840 PF11713 Peptidase C80 family HND97_09840 PF11647 Membrane Localization Domain HND97_09840 PF12146 Serine aminopeptidase, S33 HND97_09860 PF17414 MatP C-terminal ribbon-helix-helix domain HND97_09860 PF06303 MatP N-terminal domain HND97_09875 PF04957 Ribosome modulation factor HND97_10090 PF03453 MoeA N-terminal region (domain I and II) HND97_10090 PF03454 MoeA C-terminal region (domain IV) HND97_10090 PF00994 Probable molybdopterin binding domain HND97_10280 PF00005 ABC transporter HND97_10280 PF02687 FtsX-like permease family HND97_10280 PF12704 MacB-like periplasmic core domain HND97_10760 PF01752 Collagenase HND97_10760 PF08453 Peptidase family M9 N-terminal HND97_10760 PF04151 Bacterial pre-peptidase C-terminal domain HND97_10765 PF04151 Bacterial pre-peptidase C-terminal domain HND97_10765 PF08453 Peptidase family M9 N-terminal HND97_10765 PF01752 Collagenase HND97_10785 PF00497 Bacterial extracellular solute-binding proteins, family 3 HND97_10785 PF00072 Response regulator receiver domain HND97_10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HND97_10785 PF00512 His Kinase A (phospho-acceptor) domain HND97_10785 PF01627 Hpt domain HND97_10795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HND97_10795 PF00072 Response regulator receiver domain HND97_10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HND97_10795 PF00512 His Kinase A (phospho-acceptor) domain HND97_10795 PF01627 Hpt domain HND97_10795 PF00672 HAMP domain HND97_10840 PF06945 Protein of unknown function (DUF1289) HND97_10885 PF01053 Cys/Met metabolism PLP-dependent enzyme HND97_10890 PF01053 Cys/Met metabolism PLP-dependent enzyme HND97_10895 PF01053 Cys/Met metabolism PLP-dependent enzyme HND97_11300 PF05930 Prophage CP4-57 regulatory protein (AlpA) HND97_11360 PF00672 HAMP domain HND97_11360 PF02743 Cache domain HND97_11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HND97_11365 PF17200 Single Cache domain 2 HND97_11365 PF00672 HAMP domain HND97_11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HND97_11400 PF00672 HAMP domain HND97_11400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HND97_11400 PF12729 Four helix bundle sensory module for signal transduction HND97_11440 PF11954 Domain of unknown function (DUF3471) HND97_11440 PF00144 Beta-lactamase HND97_11565 PF12833 Helix-turn-helix domain HND97_11565 PF02311 AraC-like ligand binding domain HND97_11760 PF11490 DNA polymerase III polC-type N-terminus II HND97_11760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HND97_11760 PF14480 DNA polymerase III polC-type N-terminus I HND97_11760 PF14579 Helix-hairpin-helix motif HND97_11760 PF02811 PHP domain HND97_11760 PF00929 Exonuclease HND97_11760 PF07733 Bacterial DNA polymerase III alpha NTPase domain HND97_11915 PF02472 Biopolymer transport protein ExbD/TolR HND97_11930 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HND97_11935 PF08173 Membrane bound YbgT-like protein HND97_11950 PF01654 Cytochrome bd terminal oxidase subunit I HND97_12110 PF03966 Trm112p-like protein HND97_12225 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HND97_12230 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HND97_12235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HND97_12240 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HND97_12245 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HND97_12250 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HND97_12270 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HND97_12270 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HND97_12480 PF00384 Molybdopterin oxidoreductase HND97_12480 PF18364 Molybdopterin oxidoreductase N-terminal domain HND97_12480 PF01568 Molydopterin dinucleotide binding domain HND97_12485 PF01568 Molydopterin dinucleotide binding domain HND97_12485 PF00384 Molybdopterin oxidoreductase HND97_12485 PF18364 Molybdopterin oxidoreductase N-terminal domain HND97_12490 PF00384 Molybdopterin oxidoreductase HND97_12490 PF18364 Molybdopterin oxidoreductase N-terminal domain HND97_12490 PF01568 Molydopterin dinucleotide binding domain HND97_12510 PF00704 Glycosyl hydrolases family 18 HND97_12510 PF06483 Chitinase C HND97_12790 PF00209 Sodium:neurotransmitter symporter family HND97_12840 PF00550 Phosphopantetheine attachment site HND97_12865 PF01783 Ribosomal L32p protein family HND97_12930 PF07208 Protein of unknown function (DUF1414) HND97_13130 PF04023 FeoA domain HND97_13260 PF02774 Semialdehyde dehydrogenase, dimerisation domain HND97_13260 PF01118 Semialdehyde dehydrogenase, NAD binding domain HND97_13265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HND97_13265 PF11890 Domain of unknown function (DUF3410) HND97_13265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HND97_13310 PF01713 Smr domain HND97_13435 PF00669 Bacterial flagellin N-terminal helical region HND97_13435 PF07196 Flagellin hook IN motif HND97_13435 PF00700 Bacterial flagellin C-terminal helical region HND97_13740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HND97_13740 PF00460 Flagella basal body rod protein HND97_13930 PF00543 Nitrogen regulatory protein P-II HND97_13980 PF07977 FabA-like domain HND97_14005 PF17820 PDZ domain HND97_14005 PF02163 Peptidase family M50 HND97_14045 PF00557 Metallopeptidase family M24 HND97_14050 PF00557 Metallopeptidase family M24 HND97_14425 PF02743 Cache domain HND97_14425 PF00672 HAMP domain HND97_14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HND97_14650 PF01584 CheW-like domain HND97_14665 PF00486 Transcriptional regulatory protein, C terminal HND97_14665 PF00072 Response regulator receiver domain HND97_15190 PF00581 Rhodanese-like domain HND97_15350 PF00005 ABC transporter HND97_15355 PF00005 ABC transporter HND97_15360 PF00005 ABC transporter HND97_15365 PF00005 ABC transporter HND97_15370 PF00005 ABC transporter HND97_15475 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HND97_15510 PF00361 Proton-conducting membrane transporter HND97_15510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HND97_15510 PF13244 Domain of unknown function (DUF4040) HND97_15655 PF01256 Carbohydrate kinase HND97_15655 PF03853 YjeF-related protein N-terminus HND97_15660 PF01256 Carbohydrate kinase HND97_15660 PF03853 YjeF-related protein N-terminus HND97_16095 PF01597 Glycine cleavage H-protein HND97_16115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HND97_16115 PF02824 TGS domain HND97_16115 PF03129 Anticodon binding domain HND97_16115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HND97_16120 PF03129 Anticodon binding domain HND97_16120 PF02824 TGS domain HND97_16120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HND97_16120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HND97_16125 PF03129 Anticodon binding domain HND97_16125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HND97_16125 PF02824 TGS domain HND97_16125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HND97_16140 PF01632 Ribosomal protein L35 HND97_16145 PF00453 Ribosomal protein L20 HND97_16215 PF08212 Lipocalin-like domain HND97_16220 PF08212 Lipocalin-like domain HND97_16540 PF08212 Lipocalin-like domain HND97_16545 PF08212 Lipocalin-like domain HND97_16775 PF02567 Phenazine biosynthesis-like protein HND97_16780 PF02567 Phenazine biosynthesis-like protein HND97_16865 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HND97_17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HND97_17195 PF00072 Response regulator receiver domain HND97_17240 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HND97_17240 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HND97_17240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HND97_17240 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HND97_17240 PF10371 Domain of unknown function HND97_17255 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HND97_17255 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HND97_17260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HND97_17260 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HND97_17260 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HND97_17260 PF10371 Domain of unknown function HND97_17260 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HND97_17265 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HND97_17265 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HND97_17265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HND97_17265 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HND97_17265 PF10371 Domain of unknown function HND97_17275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HND97_17275 PF10371 Domain of unknown function HND97_17275 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HND97_17275 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HND97_17275 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HND97_17320 PF04264 YceI-like domain HND97_17550 PF03479 Plants and Prokaryotes Conserved (PCC) domain HND97_17550 PF12804 MobA-like NTP transferase domain HND97_17550 PF00132 Bacterial transferase hexapeptide (six repeats) HND97_17720 PF02780 Transketolase, C-terminal domain HND97_17720 PF00456 Transketolase, thiamine diphosphate binding domain HND97_17720 PF02779 Transketolase, pyrimidine binding domain HND97_17725 PF00456 Transketolase, thiamine diphosphate binding domain HND97_17725 PF02779 Transketolase, pyrimidine binding domain HND97_17725 PF02780 Transketolase, C-terminal domain HND97_17730 PF02780 Transketolase, C-terminal domain HND97_17730 PF00456 Transketolase, thiamine diphosphate binding domain HND97_17730 PF02779 Transketolase, pyrimidine binding domain HND97_17735 PF00456 Transketolase, thiamine diphosphate binding domain HND97_17735 PF02779 Transketolase, pyrimidine binding domain HND97_17735 PF02780 Transketolase, C-terminal domain HND97_17790 PF06942 GlpM protein HND97_17835 PF04143 Sulphur transport HND97_18030 PF00072 Response regulator receiver domain HND97_18030 PF00196 Bacterial regulatory proteins, luxR family HND97_18450 PF04336 Acyl carrier protein phosphodiesterase HND97_18675 PF06339 Ectoine synthase HND97_18860 PF00128 Alpha amylase, catalytic domain HND97_18905 PF03922 OmpW family HND97_19025 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HND97_19085 PF03544 Gram-negative bacterial TonB protein C-terminal HND97_19190 PF00313 'Cold-shock' DNA-binding domain HND97_19255 PF13302 Acetyltransferase (GNAT) domain HND97_19290 PF01047 MarR family HND97_19565 PF07670 Nucleoside recognition