locus-tag class description CSW01_00010 PF00258 Flavodoxin CSW01_00015 PF01926 50S ribosome-binding GTPase CSW01_00015 PF12631 MnmE helical domain CSW01_00015 PF10396 GTP-binding protein TrmE N-terminus CSW01_00020 PF02096 60Kd inner membrane protein CSW01_00020 PF14849 YidC periplasmic domain CSW01_00025 PF01809 Putative membrane protein insertion efficiency factor CSW01_00030 PF00825 Ribonuclease P CSW01_00035 PF00468 Ribosomal protein L34 CSW01_00040 PF00005 ABC transporter CSW01_00045 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_00050 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_00055 PF08299 Bacterial dnaA protein helix-turn-helix CSW01_00055 PF00308 Bacterial dnaA protein CSW01_00055 PF11638 DnaA N-terminal domain CSW01_00060 PF00712 DNA polymerase III beta subunit, N-terminal domain CSW01_00060 PF02767 DNA polymerase III beta subunit, central domain CSW01_00060 PF02768 DNA polymerase III beta subunit, C-terminal domain CSW01_00065 PF02463 RecF/RecN/SMC N terminal domain CSW01_00070 PF00204 DNA gyrase B CSW01_00070 PF00986 DNA gyrase B subunit, carboxyl terminus CSW01_00070 PF18053 DNA gyrase B subunit insert domain CSW01_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_00070 PF01751 Toprim domain CSW01_00085 PF00011 Hsp20/alpha crystallin family CSW01_00090 PF00155 Aminotransferase class I and II CSW01_00100 PF05746 DALR anticodon binding domain CSW01_00100 PF02092 Glycyl-tRNA synthetase beta subunit CSW01_00105 PF02091 Glycyl-tRNA synthetase alpha subunit CSW01_00110 PF01169 Uncharacterized protein family UPF0016 CSW01_00120 PF01206 Sulfurtransferase TusA CSW01_00130 PF08240 Alcohol dehydrogenase GroES-like domain CSW01_00130 PF00107 Zinc-binding dehydrogenase CSW01_00135 PF00585 C-terminal regulatory domain of Threonine dehydratase CSW01_00135 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_00140 PF00920 Dehydratase family CSW01_00145 PF01063 Amino-transferase class IV CSW01_00155 PF00205 Thiamine pyrophosphate enzyme, central domain CSW01_00155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW01_00155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW01_00160 PF01078 Magnesium chelatase, subunit ChlI CSW01_00160 PF13335 Magnesium chelatase, subunit ChlI C-terminal CSW01_00165 PF01553 Acyltransferase CSW01_00170 PF01323 DSBA-like thioredoxin domain CSW01_00175 PF01636 Phosphotransferase enzyme family CSW01_00180 PF12801 4Fe-4S binding domain CSW01_00180 PF13746 4Fe-4S dicluster domain CSW01_00180 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CSW01_00190 PF06288 Protein of unknown function (DUF1040) CSW01_00200 PF07070 SpoOM protein CSW01_00205 PF03006 Haemolysin-III related CSW01_00215 PF02386 Cation transport protein CSW01_00220 PF02080 TrkA-C domain CSW01_00220 PF02254 TrkA-N domain CSW01_00225 PF01189 16S rRNA methyltransferase RsmB/F CSW01_00225 PF01029 NusB family CSW01_00230 PF00551 Formyl transferase CSW01_00230 PF02911 Formyl transferase, C-terminal domain CSW01_00235 PF01327 Polypeptide deformylase CSW01_00240 PF01476 LysM domain CSW01_00245 PF02481 DNA recombination-mediator protein A CSW01_00245 PF17782 DprA winged helix domain CSW01_00250 PF04361 Protein of unknown function (DUF494) CSW01_00255 PF01396 Topoisomerase DNA binding C4 zinc finger CSW01_00260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CSW01_00260 PF02222 ATP-grasp domain CSW01_00265 PF00731 AIR carboxylase CSW01_00270 PF01300 Telomere recombination CSW01_00275 PF01218 Coproporphyrinogen III oxidase CSW01_00280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CSW01_00280 PF08501 Shikimate dehydrogenase substrate binding domain CSW01_00280 PF01488 Shikimate / quinate 5-dehydrogenase CSW01_00290 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_00330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CSW01_00335 PF13667 ThiC-associated domain CSW01_00335 PF01964 Radical SAM ThiC family CSW01_00340 PF02581 Thiamine monophosphate synthase CSW01_00345 PF00899 ThiF family CSW01_00350 PF02597 ThiS family CSW01_00355 PF05690 Thiazole biosynthesis protein ThiG CSW01_00360 PF04055 Radical SAM superfamily CSW01_00360 PF06968 Biotin and Thiamin Synthesis associated domain CSW01_00365 PF01321 Creatinase/Prolidase N-terminal domain CSW01_00365 PF01321 Creatinase/Prolidase N-terminal domain CSW01_00365 PF00557 Metallopeptidase family M24 CSW01_00365 PF00557 Metallopeptidase family M24 CSW01_00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_00370 PF03466 LysR substrate binding domain CSW01_00375 PF07690 Major Facilitator Superfamily CSW01_00385 PF01037 Lrp/AsnC ligand binding domain CSW01_00390 PF00563 EAL domain CSW01_00390 PF00990 Diguanylate cyclase, GGDEF domain CSW01_00390 PF08448 PAS fold CSW01_00395 PF04445 Putative SAM-dependent methyltransferase CSW01_00405 PF00892 EamA-like transporter family CSW01_00410 PF00582 Universal stress protein family CSW01_00420 PF00210 Ferritin-like domain CSW01_00425 PF10625 Universal stress protein B (UspB) CSW01_00440 PF02646 RmuC family CSW01_00445 PF01209 ubiE/COQ5 methyltransferase family CSW01_00450 PF02036 SCP-2 sterol transfer family CSW01_00455 PF03109 ABC1 family CSW01_00460 PF02416 mttA/Hcf106 family CSW01_00465 PF02416 mttA/Hcf106 family CSW01_00470 PF00902 Sec-independent protein translocase protein (TatC) CSW01_00475 PF00034 Cytochrome c CSW01_00475 PF03150 Di-haem cytochrome c peroxidase CSW01_00480 PF01554 MatE CSW01_00490 PF00717 Peptidase S24-like CSW01_00490 PF01726 LexA DNA binding domain CSW01_00500 PF01553 Acyltransferase CSW01_00505 PF01040 UbiA prenyltransferase family CSW01_00510 PF04345 Chorismate lyase CSW01_00520 PF03748 Flagellar basal body-associated protein FliL CSW01_00525 PF02203 Tar ligand binding domain homologue CSW01_00525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_00525 PF00672 HAMP domain CSW01_00530 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CSW01_00530 PF01694 Rhomboid family CSW01_00535 PF00581 Rhodanese-like domain CSW01_00545 PF01026 TatD related DNase CSW01_00550 PF00490 Delta-aminolevulinic acid dehydratase CSW01_00560 PF01367 5'-3' exonuclease, C-terminal SAM fold CSW01_00560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSW01_00560 PF00476 DNA polymerase family A CSW01_00560 PF01612 3'-5' exonuclease CSW01_00565 PF01926 50S ribosome-binding GTPase CSW01_00570 PF00034 Cytochrome c CSW01_00580 PF04220 Der GTPase activator (YihI) CSW01_00585 PF10675 Protein of unknown function (DUF2489) CSW01_00590 PF06969 HemN C-terminal domain CSW01_00590 PF04055 Radical SAM superfamily CSW01_00595 PF07219 HemY protein N-terminus CSW01_00600 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CSW01_00605 PF02602 Uroporphyrinogen-III synthase HemD CSW01_00610 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CSW01_00610 PF03900 Porphobilinogen deaminase, C-terminal domain CSW01_00620 PF12633 Adenylate cyclase NT domain CSW01_00620 PF01295 Adenylate cyclase, class-I CSW01_00625 PF01491 Frataxin-like domain CSW01_00635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CSW01_00635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CSW01_00640 PF01678 Diaminopimelate epimerase CSW01_00645 PF04340 Protein of unknown function, DUF484 CSW01_00650 PF02899 Phage integrase, N-terminal SAM-like domain CSW01_00650 PF00589 Phage integrase family CSW01_00655 PF13419 Haloacid dehalogenase-like hydrolase CSW01_00660 PF00990 Diguanylate cyclase, GGDEF domain CSW01_00660 PF10442 FIST C domain CSW01_00660 PF08495 FIST N domain CSW01_00660 PF00563 EAL domain CSW01_00685 PF12146 Serine aminopeptidase, S33 CSW01_00690 PF01810 LysE type translocator CSW01_00695 PF08668 HDOD domain CSW01_00695 PF00563 EAL domain CSW01_00700 PF00210 Ferritin-like domain CSW01_00745 PF02881 SRP54-type protein, helical bundle domain CSW01_00745 PF00448 SRP54-type protein, GTPase domain CSW01_00750 PF00005 ABC transporter CSW01_00755 PF18075 FtsX extracellular domain CSW01_00760 PF04542 Sigma-70 region 2 CSW01_00760 PF00140 Sigma-70 factor, region 1.2 CSW01_00760 PF04545 Sigma-70, region 4 CSW01_00765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_00765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW01_00775 PF00440 Bacterial regulatory proteins, tetR family CSW01_00785 PF05958 tRNA (Uracil-5-)-methyltransferase CSW01_00790 PF00593 TonB dependent receptor CSW01_00790 PF07715 TonB-dependent Receptor Plug Domain CSW01_00795 PF05922 Peptidase inhibitor I9 CSW01_00795 PF04151 Bacterial pre-peptidase C-terminal domain CSW01_00795 PF00082 Subtilase family CSW01_00800 PF01177 Asp/Glu/Hydantoin racemase CSW01_00835 PF03466 LysR substrate binding domain CSW01_00835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_00840 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CSW01_00840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CSW01_00845 PF04380 Membrane fusogenic activity CSW01_00850 PF00873 AcrB/AcrD/AcrF family CSW01_00855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_00860 PF00440 Bacterial regulatory proteins, tetR family CSW01_00865 PF13361 UvrD-like helicase C-terminal domain CSW01_00865 PF00580 UvrD/REP helicase N-terminal domain CSW01_00870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CSW01_00910 PF00005 ABC transporter CSW01_00910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_00915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_00925 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_00925 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW01_00935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW01_01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_01000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW01_01005 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CSW01_01010 PF01432 Peptidase family M3 CSW01_01015 PF00580 UvrD/REP helicase N-terminal domain CSW01_01015 PF13361 UvrD-like helicase C-terminal domain CSW01_01025 PF01810 LysE type translocator CSW01_01030 PF12833 Helix-turn-helix domain CSW01_01040 PF00892 EamA-like transporter family CSW01_01045 PF16124 RecQ zinc-binding CSW01_01045 PF00270 DEAD/DEAH box helicase CSW01_01045 PF09382 RQC domain CSW01_01045 PF00570 HRDC domain CSW01_01045 PF00271 Helicase conserved C-terminal domain CSW01_01060 PF00664 ABC transporter transmembrane region CSW01_01060 PF00005 ABC transporter CSW01_01065 PF07715 TonB-dependent Receptor Plug Domain CSW01_01065 PF00593 TonB dependent receptor CSW01_01070 PF00005 ABC transporter CSW01_01075 PF01497 Periplasmic binding protein CSW01_01080 PF01032 FecCD transport family CSW01_01085 PF01418 Helix-turn-helix domain, rpiR family CSW01_01085 PF01380 SIS domain CSW01_01095 PF13580 SIS domain CSW01_01100 PF00367 phosphotransferase system, EIIB CSW01_01100 PF02378 Phosphotransferase system, EIIC CSW01_01105 PF03350 Uncharacterized protein family, UPF0114 CSW01_01110 PF03755 YicC-like family, N-terminal region CSW01_01110 PF08340 Domain of unknown function (DUF1732) CSW01_01115 PF03725 3' exoribonuclease family, domain 2 CSW01_01115 PF01138 3' exoribonuclease family, domain 1 CSW01_01120 PF00156 Phosphoribosyl transferase domain CSW01_01125 PF03279 Bacterial lipid A biosynthesis acyltransferase CSW01_01130 PF03279 Bacterial lipid A biosynthesis acyltransferase CSW01_01135 PF00440 Bacterial regulatory proteins, tetR family CSW01_01145 PF04127 DNA / pantothenate metabolism flavoprotein CSW01_01145 PF02441 Flavoprotein CSW01_01150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_01150 PF00672 HAMP domain CSW01_01155 PF04002 RadC-like JAB domain CSW01_01160 PF00830 Ribosomal L28 family CSW01_01165 PF00471 Ribosomal protein L33 CSW01_01175 PF06827 Zinc finger found in FPG and IleRS CSW01_01175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CSW01_01175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CSW01_01180 PF01467 Cytidylyltransferase-like CSW01_01185 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSW01_01190 PF00535 Glycosyl transferase family 2 CSW01_01195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSW01_01230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CSW01_01235 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CSW01_01245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CSW01_01260 PF01522 Polysaccharide deacetylase CSW01_01260 PF00457 Glycosyl hydrolases family 11 CSW01_01265 PF01370 NAD dependent epimerase/dehydratase family CSW01_01270 PF00483 Nucleotidyl transferase CSW01_01270 PF01050 Mannose-6-phosphate isomerase CSW01_01275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW01_01275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW01_01275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW01_01275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW01_01280 PF16363 GDP-mannose 4,6 dehydratase CSW01_01285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CSW01_01300 PF14524 Wzt C-terminal domain CSW01_01300 PF00005 ABC transporter CSW01_01310 PF13193 AMP-binding enzyme C-terminal domain CSW01_01310 PF00501 AMP-binding enzyme CSW01_01315 PF00465 Iron-containing alcohol dehydrogenase CSW01_01315 PF00171 Aldehyde dehydrogenase family CSW01_01325 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_01350 PF02719 Polysaccharide biosynthesis protein CSW01_01355 PF01370 NAD dependent epimerase/dehydratase family CSW01_01360 PF02397 Bacterial sugar transferase CSW01_01365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CSW01_01365 PF10996 Beta-Casp domain CSW01_01365 PF00753 Metallo-beta-lactamase superfamily CSW01_01370 PF00924 Mechanosensitive ion channel CSW01_01375 PF03167 Uracil DNA glycosylase superfamily CSW01_01380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW01_01385 PF04222 Protein of unknown function (DUF416) CSW01_01390 PF01238 Phosphomannose isomerase type I CSW01_01395 PF00480 ROK family CSW01_01400 PF00571 CBS domain CSW01_01400 PF01595 Cyclin M transmembrane N-terminal domain CSW01_01405 PF00216 Bacterial DNA-binding protein CSW01_01415 PF02844 Phosphoribosylglycinamide synthetase, N domain CSW01_01415 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CSW01_01415 PF02843 Phosphoribosylglycinamide synthetase, C domain CSW01_01420 PF02142 MGS-like domain CSW01_01420 PF01808 AICARFT/IMPCHase bienzyme CSW01_01430 PF13411 MerR HTH family regulatory protein CSW01_01435 PF18500 CadC C-terminal domain 1 CSW01_01435 PF00486 Transcriptional regulatory protein, C terminal CSW01_01440 PF13520 Amino acid permease CSW01_01445 PF01276 Orn/Lys/Arg decarboxylase, major domain CSW01_01445 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CSW01_01445 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CSW01_01450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_01450 PF17200 Single Cache domain 2 CSW01_01450 PF00672 HAMP domain CSW01_01465 PF01081 KDPG and KHG aldolase CSW01_01470 PF02447 GntP family permease CSW01_01475 PF01202 Shikimate kinase CSW01_01480 PF00920 Dehydratase family CSW01_01485 PF00356 Bacterial regulatory proteins, lacI family CSW01_01485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW01_01490 PF02954 Bacterial regulatory protein, Fis family CSW01_01495 PF01207 Dihydrouridine synthase (Dus) CSW01_01505 PF02785 Biotin carboxylase C-terminal domain CSW01_01505 PF00289 Biotin carboxylase, N-terminal domain CSW01_01505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW01_01510 PF00364 Biotin-requiring enzyme CSW01_01515 PF01220 Dehydroquinase class II CSW01_01520 PF13193 AMP-binding enzyme C-terminal domain CSW01_01520 PF00501 AMP-binding enzyme CSW01_01520 PF16177 Acetyl-coenzyme A synthetase N-terminus CSW01_01540 PF12832 MFS_1 like family CSW01_01545 PF09456 RcsC Alpha-Beta-Loop (ABL) CSW01_01545 PF00072 Response regulator receiver domain CSW01_01545 PF00512 His Kinase A (phospho-acceptor) domain CSW01_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_01550 PF02541 Ppx/GppA phosphatase family CSW01_01555 PF00271 Helicase conserved C-terminal domain CSW01_01555 PF00270 DEAD/DEAH box helicase CSW01_01560 PF00085 Thioredoxin CSW01_01565 PF07497 Rho termination factor, RNA-binding domain CSW01_01565 PF07498 Rho termination factor, N-terminal domain CSW01_01565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW01_01575 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CSW01_01580 PF00175 Oxidoreductase NAD-binding domain CSW01_01580 PF00111 2Fe-2S iron-sulfur cluster binding domain CSW01_01580 PF00970 Oxidoreductase FAD-binding domain CSW01_01585 PF00175 Oxidoreductase NAD-binding domain CSW01_01620 PF13091 PLD-like domain CSW01_01630 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CSW01_01630 PF01565 FAD binding domain CSW01_01635 PF02237 Biotin protein ligase C terminal domain CSW01_01635 PF03099 Biotin/lipoate A/B protein ligase family CSW01_01635 PF08279 HTH domain CSW01_01640 PF00485 Phosphoribulokinase / Uridine kinase family CSW01_01665 PF03143 Elongation factor Tu C-terminal domain CSW01_01665 PF03144 Elongation factor Tu domain 2 CSW01_01665 PF00009 Elongation factor Tu GTP binding domain CSW01_01670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CSW01_01675 PF02357 Transcription termination factor nusG CSW01_01675 PF00467 KOW motif CSW01_01680 PF03946 Ribosomal protein L11, N-terminal domain CSW01_01680 PF00298 Ribosomal protein L11, RNA binding domain CSW01_01685 PF00687 Ribosomal protein L1p/L10e family CSW01_01690 PF00466 Ribosomal protein L10 CSW01_01695 PF00542 Ribosomal protein L7/L12 C-terminal domain CSW01_01695 PF16320 Ribosomal protein L7/L12 dimerisation domain CSW01_01700 PF04563 RNA polymerase beta subunit CSW01_01700 PF04561 RNA polymerase Rpb2, domain 2 CSW01_01700 PF04565 RNA polymerase Rpb2, domain 3 CSW01_01700 PF10385 RNA polymerase beta subunit external 1 domain CSW01_01700 PF00562 RNA polymerase Rpb2, domain 6 CSW01_01700 PF04560 RNA polymerase Rpb2, domain 7 CSW01_01705 PF00623 RNA polymerase Rpb1, domain 2 CSW01_01705 PF04997 RNA polymerase Rpb1, domain 1 CSW01_01705 PF04983 RNA polymerase Rpb1, domain 3 CSW01_01705 PF04998 RNA polymerase Rpb1, domain 5 CSW01_01705 PF05000 RNA polymerase Rpb1, domain 4 CSW01_01710 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CSW01_01715 PF00293 NUDIX domain CSW01_01715 PF09297 NADH pyrophosphatase zinc ribbon domain CSW01_01720 PF01208 Uroporphyrinogen decarboxylase (URO-D) CSW01_01725 PF00440 Bacterial regulatory proteins, tetR family CSW01_01725 PF08360 QacR-like protein, C-terminal region CSW01_01735 PF01551 Peptidase family M23 CSW01_01740 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CSW01_01740 PF01676 Metalloenzyme superfamily CSW01_01750 PF02080 TrkA-C domain CSW01_01750 PF03600 Citrate transporter CSW01_01755 PF02666 Phosphatidylserine decarboxylase CSW01_01765 PF00929 Exonuclease CSW01_01810 PF08331 Domain of unknown function (DUF1730) CSW01_01815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CSW01_01820 PF01520 N-acetylmuramoyl-L-alanine amidase CSW01_01825 PF01119 DNA mismatch repair protein, C-terminal domain CSW01_01825 PF08676 MutL C terminal dimerisation domain CSW01_01835 PF17209 Hfq protein CSW01_01840 PF13167 GTP-binding GTPase N-terminal CSW01_01840 PF16360 GTP-binding GTPase Middle Region CSW01_01840 PF01926 50S ribosome-binding GTPase CSW01_01845 PF01145 SPFH domain / Band 7 family CSW01_01845 PF12221 Bacterial membrane protein N terminal CSW01_01850 PF01145 SPFH domain / Band 7 family CSW01_01855 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CSW01_01860 PF04102 SlyX CSW01_01870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW01_01870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CSW01_01875 PF13309 HTH domain CSW01_01875 PF08348 YheO-like PAS domain CSW01_01880 PF02635 DsrE/DsrF-like family CSW01_01885 PF02635 DsrE/DsrF-like family CSW01_01895 PF00164 Ribosomal protein S12/S23 CSW01_01900 PF00177 Ribosomal protein S7p/S5e CSW01_01905 PF00679 Elongation factor G C-terminus CSW01_01905 PF14492 Elongation Factor G, domain II CSW01_01905 PF03144 Elongation factor Tu domain 2 CSW01_01905 PF00009 Elongation factor Tu GTP binding domain CSW01_01905 PF03764 Elongation factor G, domain IV CSW01_01910 PF03143 Elongation factor Tu C-terminal domain CSW01_01910 PF03144 Elongation factor Tu domain 2 CSW01_01910 PF00009 Elongation factor Tu GTP binding domain CSW01_01915 PF04324 BFD-like [2Fe-2S] binding domain CSW01_01920 PF00210 Ferritin-like domain CSW01_01925 PF01250 Ribosomal protein S6 CSW01_01930 PF00436 Single-strand binding protein family CSW01_01935 PF01084 Ribosomal protein S18 CSW01_01940 PF01281 Ribosomal protein L9, N-terminal domain CSW01_01940 PF03948 Ribosomal protein L9, C-terminal domain CSW01_01950 PF00772 DnaB-like helicase N terminal domain CSW01_01950 PF03796 DnaB-like helicase C terminal domain CSW01_01955 PF00842 Alanine racemase, C-terminal domain CSW01_01955 PF01168 Alanine racemase, N-terminal domain CSW01_01960 PF01894 Uncharacterised protein family UPF0047 CSW01_01965 PF00342 Phosphoglucose isomerase CSW01_01970 PF12706 Beta-lactamase superfamily domain CSW01_01980 PF01475 Ferric uptake regulator family CSW01_01985 PF01207 Dihydrouridine synthase (Dus) CSW01_01990 PF09583 Phage shock protein G (Phageshock_PspG) CSW01_02010 PF00667 FAD binding domain CSW01_02010 PF00258 Flavodoxin CSW01_02010 PF00175 Oxidoreductase NAD-binding domain CSW01_02015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CSW01_02015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CSW01_02020 PF01507 Phosphoadenosine phosphosulfate reductase family CSW01_02055 PF00999 Sodium/hydrogen exchanger family CSW01_02060 PF02310 B12 binding domain CSW01_02060 PF00809 Pterin binding enzyme CSW01_02060 PF02965 Vitamin B12 dependent methionine synthase, activation domain CSW01_02060 PF02574 Homocysteine S-methyltransferase CSW01_02060 PF02607 B12 binding domain CSW01_02065 PF00696 Amino acid kinase family CSW01_02065 PF01842 ACT domain CSW01_02070 PF00266 Aminotransferase class-V CSW01_02080 PF17755 UvrA DNA-binding domain CSW01_02080 PF17760 UvrA interaction domain CSW01_02080 PF00005 ABC transporter CSW01_02085 PF00483 Nucleotidyl transferase CSW01_02090 PF00196 Bacterial regulatory proteins, luxR family CSW01_02095 PF00436 Single-strand binding protein family CSW01_02100 PF17157 Gammaproteobacterial periplasmic sensor domain CSW01_02100 PF00563 EAL domain CSW01_02100 PF00990 Diguanylate cyclase, GGDEF domain CSW01_02120 PF03958 Bacterial type II/III secretion system short domain CSW01_02120 PF00263 Bacterial type II and III secretion system protein CSW01_02120 PF11741 AMIN domain CSW01_02120 PF07660 Secretin and TonB N terminus short domain CSW01_02125 PF01471 Putative peptidoglycan binding domain CSW01_02125 PF13401 AAA domain CSW01_02135 PF00437 Type II/IV secretion system protein CSW01_02140 PF00482 Type II secretion system (T2SS), protein F CSW01_02150 PF00114 Pilin (bacterial filament) CSW01_02150 PF07963 Prokaryotic N-terminal methylation motif CSW01_02155 PF07963 Prokaryotic N-terminal methylation motif CSW01_02155 PF00114 Pilin (bacterial filament) CSW01_02190 PF04085 rod shape-determining protein MreC CSW01_02195 PF04093 rod shape-determining protein MreD CSW01_02200 PF02545 Maf-like protein CSW01_02205 PF10150 Ribonuclease E/G family CSW01_02205 PF00575 S1 RNA binding domain CSW01_02210 PF13502 AsmA-like C-terminal region CSW01_02210 PF13116 Protein of unknown function CSW01_02215 PF00795 Carbon-nitrogen hydrolase CSW01_02220 PF01523 Putative modulator of DNA gyrase CSW01_02230 PF06877 Regulator of ribonuclease activity B CSW01_02245 PF00582 Universal stress protein family CSW01_02255 PF16868 NMT1-like family CSW01_02265 PF01316 Arginine repressor, DNA binding domain CSW01_02265 PF02863 Arginine repressor, C-terminal domain CSW01_02270 PF00056 lactate/malate dehydrogenase, NAD binding domain CSW01_02270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSW01_02275 PF13520 Amino acid permease CSW01_02280 PF00348 Polyprenyl synthetase CSW01_02285 PF00829 Ribosomal prokaryotic L21 protein CSW01_02290 PF01016 Ribosomal L27 protein CSW01_02295 PF01018 GTP1/OBG CSW01_02295 PF01926 50S ribosome-binding GTPase CSW01_02300 PF06738 Putative threonine/serine exporter CSW01_02305 PF12821 Threonine/Serine exporter, ThrE CSW01_02310 PF00186 Dihydrofolate reductase CSW01_02315 PF00149 Calcineurin-like phosphoesterase CSW01_02320 PF04379 ApaG domain CSW01_02325 PF00398 Ribosomal RNA adenine dimethylase CSW01_02330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CSW01_02335 PF09312 SurA N-terminal domain CSW01_02340 PF04453 LPS transport system D CSW01_02340 PF03968 OstA-like protein CSW01_02345 PF00226 DnaJ domain CSW01_02345 PF05099 Tellurite resistance protein TerB CSW01_02375 PF12729 Four helix bundle sensory module for signal transduction CSW01_02375 PF00672 HAMP domain CSW01_02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_02400 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CSW01_02400 PF01464 Transglycosylase SLT domain CSW01_02405 PF04362 Bacterial Fe(2+) trafficking CSW01_02410 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW01_02410 PF10576 Iron-sulfur binding domain of endonuclease III CSW01_02410 PF14815 NUDIX domain CSW01_02410 PF00633 Helix-hairpin-helix motif CSW01_02415 PF02390 Putative methyltransferase CSW01_02420 PF04960 Glutaminase CSW01_02425 PF06969 HemN C-terminal domain CSW01_02425 PF04055 Radical SAM superfamily CSW01_02430 PF01725 Ham1 family CSW01_02440 PF02594 Uncharacterised ACR, YggU family COG1872 CSW01_02445 PF02325 YGGT family CSW01_02450 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSW01_02450 PF03807 NADP oxidoreductase coenzyme F420-dependent CSW01_02455 PF01168 Alanine racemase, N-terminal domain CSW01_02460 PF00437 Type II/IV secretion system protein CSW01_02465 PF00437 Type II/IV secretion system protein CSW01_02475 PF00579 tRNA synthetases class I (W and Y) CSW01_02475 PF01479 S4 domain CSW01_02480 PF03652 Holliday junction resolvase CSW01_02485 PF02622 Uncharacterized ACR, COG1678 CSW01_02490 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CSW01_02490 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CSW01_02495 PF04452 RNA methyltransferase CSW01_02500 PF04231 Endonuclease I CSW01_02505 PF17283 SprT-like zinc ribbon domain CSW01_02505 PF10263 SprT-like family CSW01_02510 PF02772 S-adenosylmethionine synthetase, central domain CSW01_02510 PF00438 S-adenosylmethionine synthetase, N-terminal domain CSW01_02510 PF02773 S-adenosylmethionine synthetase, C-terminal domain CSW01_02515 PF02780 Transketolase, C-terminal domain CSW01_02515 PF00456 Transketolase, thiamine diphosphate binding domain CSW01_02515 PF02779 Transketolase, pyrimidine binding domain CSW01_02520 PF03466 LysR substrate binding domain CSW01_02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_02525 PF00593 TonB dependent receptor CSW01_02525 PF07715 TonB-dependent Receptor Plug Domain CSW01_02530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSW01_02530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSW01_02535 PF00162 Phosphoglycerate kinase CSW01_02540 PF01116 Fructose-bisphosphate aldolase class-II CSW01_02550 PF00924 Mechanosensitive ion channel CSW01_02550 PF05552 Conserved TM helix CSW01_02555 PF01810 LysE type translocator CSW01_02560 PF03466 LysR substrate binding domain CSW01_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_02565 PF04402 Protein of unknown function (DUF541) CSW01_02575 PF02887 Pyruvate kinase, alpha/beta domain CSW01_02575 PF00224 Pyruvate kinase, barrel domain CSW01_02580 PF00455 DeoR C terminal sensor domain CSW01_02580 PF08220 DeoR-like helix-turn-helix domain CSW01_02585 PF01380 SIS domain CSW01_02590 PF03480 Bacterial extracellular solute-binding protein, family 7 CSW01_02640 PF00075 RNase H CSW01_02655 PF07963 Prokaryotic N-terminal methylation motif CSW01_02655 PF00114 Pilin (bacterial filament) CSW01_02665 PF01476 LysM domain CSW01_02665 PF08525 Opacity-associated protein A N-terminal motif CSW01_02665 PF01551 Peptidase family M23 CSW01_02700 PF04002 RadC-like JAB domain CSW01_02710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_02710 PF08447 PAS fold CSW01_02720 PF12833 Helix-turn-helix domain CSW01_02725 PF17200 Single Cache domain 2 CSW01_02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_02725 PF00672 HAMP domain CSW01_02730 PF08668 HDOD domain CSW01_02730 PF00563 EAL domain CSW01_02735 PF13356 Arm DNA-binding domain CSW01_02735 PF00589 Phage integrase family CSW01_02745 PF00140 Sigma-70 factor, region 1.2 CSW01_02745 PF03979 Sigma-70 factor, region 1.1 CSW01_02745 PF04546 Sigma-70, non-essential region CSW01_02745 PF04539 Sigma-70 region 3 CSW01_02745 PF04545 Sigma-70, region 4 CSW01_02745 PF04542 Sigma-70 region 2 CSW01_02750 PF01807 CHC2 zinc finger CSW01_02750 PF08275 DNA primase catalytic core, N-terminal domain CSW01_02750 PF08278 DNA primase DnaG DnaB-binding CSW01_02750 PF10410 DnaB-helicase binding domain of primase CSW01_02755 PF09424 Yqey-like protein CSW01_02760 PF01165 Ribosomal protein S21 CSW01_02765 PF00814 Glycoprotease family CSW01_02770 PF00561 alpha/beta hydrolase fold CSW01_02775 PF02660 Glycerol-3-phosphate acyltransferase CSW01_02785 PF02152 Dihydroneopterin aldolase CSW01_02790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CSW01_02795 PF02673 Bacitracin resistance protein BacA CSW01_02800 PF04977 Septum formation initiator CSW01_02805 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CSW01_02810 PF02542 YgbB family CSW01_02815 PF01142 tRNA pseudouridine synthase D (TruD) CSW01_02820 PF01975 Survival protein SurE CSW01_02830 PF01551 Peptidase family M23 CSW01_02830 PF01476 LysM domain CSW01_02835 PF00140 Sigma-70 factor, region 1.2 CSW01_02835 PF04542 Sigma-70 region 2 CSW01_02835 PF04539 Sigma-70 region 3 CSW01_02835 PF04545 Sigma-70, region 4 CSW01_02840 PF05188 MutS domain II CSW01_02840 PF01624 MutS domain I CSW01_02840 PF00488 MutS domain V CSW01_02840 PF05190 MutS family domain IV CSW01_02840 PF05192 MutS domain III CSW01_02845 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_02855 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_02860 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_02865 PF00005 ABC transporter CSW01_02865 PF12857 TOBE-like domain CSW01_02870 PF02464 Competence-damaged protein CSW01_02875 PF00154 recA bacterial DNA recombination protein CSW01_02880 PF02631 RecX family CSW01_02885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW01_02885 PF01411 tRNA synthetases class II (A) CSW01_02885 PF02272 DHHA1 domain CSW01_02890 PF01842 ACT domain CSW01_02890 PF00696 Amino acid kinase family CSW01_02890 PF13840 ACT domain CSW01_02895 PF02599 Global regulator protein family CSW01_02940 PF04277 Oxaloacetate decarboxylase, gamma chain CSW01_02945 PF00364 Biotin-requiring enzyme CSW01_02945 PF00682 HMGL-like CSW01_02945 PF02436 Conserved carboxylase domain CSW01_02950 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CSW01_02960 PF09335 SNARE associated Golgi protein CSW01_02965 PF05193 Peptidase M16 inactive domain CSW01_02965 PF00675 Insulinase (Peptidase family M16) CSW01_02970 PF04262 Glutamate-cysteine ligase CSW01_02975 PF02664 S-Ribosylhomocysteinase (LuxS) CSW01_02980 PF01595 Cyclin M transmembrane N-terminal domain CSW01_02980 PF00571 CBS domain CSW01_02980 PF03471 Transporter associated domain CSW01_02985 PF01578 Cytochrome C assembly protein CSW01_02990 PF02978 Signal peptide binding domain CSW01_02990 PF00448 SRP54-type protein, GTPase domain CSW01_02990 PF02881 SRP54-type protein, helical bundle domain CSW01_02995 PF00886 Ribosomal protein S16 CSW01_03000 PF05239 PRC-barrel domain CSW01_03000 PF01782 RimM N-terminal domain CSW01_03005 PF01746 tRNA (Guanine-1)-methyltransferase CSW01_03010 PF01245 Ribosomal protein L19 CSW01_03015 PF13180 PDZ domain CSW01_03020 PF00595 PDZ domain CSW01_03030 PF03969 AFG1-like ATPase CSW01_03035 PF00572 Ribosomal protein L13 CSW01_03040 PF00380 Ribosomal protein S9/S16 CSW01_03045 PF00355 Rieske [2Fe-2S] domain CSW01_03045 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CSW01_03050 PF00032 Cytochrome b(C-terminal)/b6/petD CSW01_03050 PF00033 Cytochrome b/b6/petB CSW01_03055 PF02167 Cytochrome C1 family CSW01_03060 PF02798 Glutathione S-transferase, N-terminal domain CSW01_03060 PF00043 Glutathione S-transferase, C-terminal domain CSW01_03065 PF04386 Stringent starvation protein B CSW01_03070 PF04972 BON domain CSW01_03075 PF13580 SIS domain CSW01_03080 PF02021 Uncharacterised protein family UPF0102 CSW01_03085 PF04348 LppC putative lipoprotein CSW01_03090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW01_03100 PF00440 Bacterial regulatory proteins, tetR family CSW01_03105 PF00156 Phosphoribosyl transferase domain CSW01_03110 PF00484 Carbonic anhydrase CSW01_03115 PF00916 Sulfate permease family CSW01_03115 PF01740 STAS domain CSW01_03120 PF00005 ABC transporter CSW01_03125 PF01061 ABC-2 type transporter CSW01_03130 PF02569 Pantoate-beta-alanine ligase CSW01_03135 PF02548 Ketopantoate hydroxymethyltransferase CSW01_03140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CSW01_03145 PF12627 Probable RNA and SrmB- binding site of polymerase A CSW01_03145 PF12626 Polymerase A arginine-rich C-terminus CSW01_03145 PF01743 Poly A polymerase head domain CSW01_03150 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSW01_03155 PF01258 Prokaryotic dksA/traR C4-type zinc finger CSW01_03160 PF03749 Sugar fermentation stimulation protein RE domain CSW01_03160 PF17746 SfsA N-terminal OB domain CSW01_03170 PF00271 Helicase conserved C-terminal domain CSW01_03170 PF08482 ATP-dependent helicase C-terminal CSW01_03170 PF00270 DEAD/DEAH box helicase CSW01_03170 PF04408 Helicase associated domain (HA2) CSW01_03175 PF00905 Penicillin binding protein transpeptidase domain CSW01_03175 PF14814 Bifunctional transglycosylase second domain CSW01_03175 PF00912 Transglycosylase CSW01_03180 PF01734 Patatin-like phospholipase CSW01_03185 PF06434 Aconitate hydratase 2 N-terminus CSW01_03185 PF00330 Aconitase family (aconitate hydratase) CSW01_03185 PF11791 Aconitate B N-terminal domain CSW01_03190 PF06062 Uncharacterised protein family (UPF0231) CSW01_03195 PF00543 Nitrogen regulatory protein P-II CSW01_03200 PF00909 Ammonium Transporter Family CSW01_03205 PF13416 Bacterial extracellular solute-binding protein CSW01_03215 PF08402 TOBE domain CSW01_03215 PF00005 ABC transporter CSW01_03220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW01_03220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW01_03220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW01_03220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW01_03225 PF06165 Glycosyltransferase family 36 CSW01_03225 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CSW01_03230 PF02838 Glycosyl hydrolase family 20, domain 2 CSW01_03230 PF00728 Glycosyl hydrolase family 20, catalytic domain CSW01_03235 PF01869 BadF/BadG/BcrA/BcrD ATPase family CSW01_03245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_03245 PF00005 ABC transporter CSW01_03250 PF00005 ABC transporter CSW01_03250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_03255 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW01_03255 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_03260 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_03265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_03275 PF09308 LuxQ, periplasmic CSW01_03275 PF00072 Response regulator receiver domain CSW01_03275 PF00512 His Kinase A (phospho-acceptor) domain CSW01_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_03280 PF08468 Methyltransferase small domain N-terminal CSW01_03280 PF05175 Methyltransferase small domain CSW01_03285 PF01594 AI-2E family transporter CSW01_03290 PF00202 Aminotransferase class-III CSW01_03295 PF01521 Iron-sulphur cluster biosynthesis CSW01_03305 PF00873 AcrB/AcrD/AcrF family CSW01_03310 PF01551 Peptidase family M23 CSW01_03310 PF04225 Opacity-associated protein A LysM-like domain CSW01_03315 PF01479 S4 domain CSW01_03315 PF00579 tRNA synthetases class I (W and Y) CSW01_03320 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CSW01_03325 PF13609 Gram-negative porin CSW01_03330 PF03449 Transcription elongation factor, N-terminal CSW01_03330 PF01272 Transcription elongation factor, GreA/GreB, C-term CSW01_03335 PF01985 CRS1 / YhbY (CRM) domain CSW01_03340 PF01728 FtsJ-like methyltransferase CSW01_03345 PF01434 Peptidase family M41 CSW01_03345 PF17862 AAA+ lid domain CSW01_03345 PF06480 FtsH Extracellular CSW01_03345 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_03350 PF00809 Pterin binding enzyme CSW01_03355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW01_03355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW01_03355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW01_03355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW01_03365 PF03840 Preprotein translocase SecG subunit CSW01_03380 PF17384 RimP C-terminal SH3 domain CSW01_03380 PF02576 RimP N-terminal domain CSW01_03385 PF08529 NusA N-terminal domain CSW01_03385 PF13184 NusA-like KH domain CSW01_03385 PF00575 S1 RNA binding domain CSW01_03390 PF08364 Bacterial translation initiation factor IF-2 associated region CSW01_03390 PF04760 Translation initiation factor IF-2, N-terminal region CSW01_03390 PF11987 Translation-initiation factor 2 CSW01_03390 PF00009 Elongation factor Tu GTP binding domain CSW01_03395 PF02033 Ribosome-binding factor A CSW01_03400 PF09157 Pseudouridine synthase II TruB, C-terminal CSW01_03400 PF01509 TruB family pseudouridylate synthase (N terminal domain) CSW01_03400 PF16198 tRNA pseudouridylate synthase B C-terminal domain CSW01_03405 PF00312 Ribosomal protein S15 CSW01_03410 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CSW01_03410 PF00013 KH domain CSW01_03410 PF01138 3' exoribonuclease family, domain 1 CSW01_03410 PF03725 3' exoribonuclease family, domain 2 CSW01_03410 PF00575 S1 RNA binding domain CSW01_03415 PF13181 Tetratricopeptide repeat CSW01_03415 PF07719 Tetratricopeptide repeat CSW01_03440 PF03707 Bacterial signalling protein N terminal repeat CSW01_03440 PF00990 Diguanylate cyclase, GGDEF domain CSW01_03440 PF00563 EAL domain CSW01_03450 PF13508 Acetyltransferase (GNAT) domain CSW01_03465 PF00563 EAL domain CSW01_03465 PF03707 Bacterial signalling protein N terminal repeat CSW01_03465 PF00990 Diguanylate cyclase, GGDEF domain CSW01_03470 PF16658 Class II release factor RF3, C-terminal domain CSW01_03470 PF03144 Elongation factor Tu domain 2 CSW01_03470 PF00009 Elongation factor Tu GTP binding domain CSW01_03475 PF00271 Helicase conserved C-terminal domain CSW01_03475 PF00270 DEAD/DEAH box helicase CSW01_03480 PF05175 Methyltransferase small domain CSW01_03485 PF05525 Branched-chain amino acid transport protein CSW01_03495 PF00152 tRNA synthetases class II (D, K and N) CSW01_03495 PF01336 OB-fold nucleic acid binding domain CSW01_03500 PF02954 Bacterial regulatory protein, Fis family CSW01_03500 PF00072 Response regulator receiver domain CSW01_03500 PF00158 Sigma-54 interaction domain CSW01_03510 PF00248 Aldo/keto reductase family CSW01_03515 PF02976 DNA mismatch repair enzyme MutH CSW01_03520 PF00293 NUDIX domain CSW01_03525 PF00391 PEP-utilising enzyme, mobile domain CSW01_03525 PF05524 PEP-utilising enzyme, N-terminal CSW01_03525 PF01590 GAF domain CSW01_03525 PF02896 PEP-utilising enzyme, TIM barrel domain CSW01_03530 PF01925 Sulfite exporter TauE/SafE CSW01_03535 PF01790 Prolipoprotein diacylglyceryl transferase CSW01_03540 PF00303 Thymidylate synthase CSW01_03545 PF02690 Na+/Pi-cotransporter CSW01_03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_03550 PF03466 LysR substrate binding domain CSW01_03555 PF01022 Bacterial regulatory protein, arsR family CSW01_03560 PF01649 Ribosomal protein S20 CSW01_03565 PF03023 Lipid II flippase MurJ CSW01_03570 PF06574 FAD synthetase CSW01_03570 PF01687 Riboflavin kinase CSW01_03575 PF08264 Anticodon-binding domain of tRNA CSW01_03575 PF00133 tRNA synthetases class I (I, L, M and V) CSW01_03575 PF06827 Zinc finger found in FPG and IleRS CSW01_03580 PF01252 Signal peptidase (SPase) II CSW01_03585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW01_03590 PF02401 LytB protein CSW01_03595 PF02554 Carbon starvation protein CstA CSW01_03610 PF13580 SIS domain CSW01_03615 PF03702 Anhydro-N-acetylmuramic acid kinase CSW01_03620 PF00933 Glycosyl hydrolase family 3 N terminal domain CSW01_03625 PF04397 LytTr DNA-binding domain CSW01_03625 PF00072 Response regulator receiver domain CSW01_03630 PF06580 Histidine kinase CSW01_03630 PF07694 5TMR of 5TMR-LYT CSW01_03635 PF00793 DAHP synthetase I family CSW01_03640 PF01817 Chorismate mutase type II CSW01_03640 PF02153 Prephenate dehydrogenase CSW01_03645 PF07238 PilZ domain CSW01_03650 PF12848 ABC transporter CSW01_03650 PF00005 ABC transporter CSW01_03655 PF01464 Transglycosylase SLT domain CSW01_03655 PF14718 Soluble lytic murein transglycosylase L domain CSW01_03660 PF01371 Trp repressor protein CSW01_03665 PF01931 Protein of unknown function DUF84 CSW01_03670 PF00563 EAL domain CSW01_03670 PF00990 Diguanylate cyclase, GGDEF domain CSW01_03675 PF13416 Bacterial extracellular solute-binding protein CSW01_03680 PF00800 Prephenate dehydratase CSW01_03680 PF01817 Chorismate mutase type II CSW01_03685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CSW01_03690 PF13525 Outer membrane lipoprotein CSW01_03695 PF00849 RNA pseudouridylate synthase CSW01_03695 PF01479 S4 domain CSW01_03705 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_03705 PF07724 AAA domain (Cdc48 subfamily) CSW01_03705 PF02861 Clp amino terminal domain, pathogenicity island component CSW01_03705 PF17871 AAA lid domain CSW01_03705 PF10431 C-terminal, D2-small domain, of ClpB protein CSW01_03740 PF00881 Nitroreductase family CSW01_03745 PF00037 4Fe-4S binding domain CSW01_03755 PF04381 Putative exonuclease, RdgC CSW01_03760 PF00072 Response regulator receiver domain CSW01_03760 PF00486 Transcriptional regulatory protein, C terminal CSW01_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_03765 PF00512 His Kinase A (phospho-acceptor) domain CSW01_03765 PF00989 PAS fold CSW01_03765 PF11808 Phosphate regulon sensor protein PhoR CSW01_03770 PF12849 PBP superfamily domain CSW01_03775 PF02541 Ppx/GppA phosphatase family CSW01_03780 PF02503 Polyphosphate kinase middle domain CSW01_03780 PF13090 Polyphosphate kinase C-terminal domain 2 CSW01_03780 PF17941 Polyphosphate kinase C-terminal domain 1 CSW01_03780 PF13089 Polyphosphate kinase N-terminal domain CSW01_03785 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_03790 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_03795 PF00005 ABC transporter CSW01_03800 PF01895 PhoU domain CSW01_03805 PF03976 Polyphosphate kinase 2 (PPK2) CSW01_03810 PF03932 CutC family CSW01_03815 PF10417 C-terminal domain of 1-Cys peroxiredoxin CSW01_03815 PF00578 AhpC/TSA family CSW01_03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_03820 PF03466 LysR substrate binding domain CSW01_03825 PF01274 Malate synthase CSW01_03830 PF00463 Isocitrate lyase family CSW01_03835 PF00571 CBS domain CSW01_03840 PF02547 Queuosine biosynthesis protein CSW01_03850 PF01702 Queuine tRNA-ribosyltransferase CSW01_03855 PF02699 Preprotein translocase subunit CSW01_03860 PF07549 SecD/SecF GG Motif CSW01_03860 PF02355 Protein export membrane protein CSW01_03860 PF13721 SecD export protein N-terminal TM region CSW01_03865 PF07549 SecD/SecF GG Motif CSW01_03865 PF02355 Protein export membrane protein CSW01_03870 PF00459 Inositol monophosphatase family CSW01_03875 PF00588 SpoU rRNA Methylase family CSW01_03880 PF02082 Transcriptional regulator CSW01_03885 PF00266 Aminotransferase class-V CSW01_03890 PF01592 NifU-like N terminal domain CSW01_03895 PF01521 Iron-sulphur cluster biosynthesis CSW01_03900 PF00226 DnaJ domain CSW01_03900 PF07743 HSCB C-terminal oligomerisation domain CSW01_03905 PF00012 Hsp70 protein CSW01_03910 PF00111 2Fe-2S iron-sulfur cluster binding domain CSW01_03915 PF04384 Iron-sulphur cluster assembly CSW01_03920 PF00883 Cytosol aminopeptidase family, catalytic domain CSW01_03920 PF12404 Peptidase CSW01_03925 PF00334 Nucleoside diphosphate kinase CSW01_03930 PF04055 Radical SAM superfamily CSW01_03935 PF13464 Domain of unknown function (DUF4115) CSW01_03940 PF04551 GcpE protein CSW01_03945 PF03129 Anticodon binding domain CSW01_03945 PF13393 Histidyl-tRNA synthetase CSW01_03950 PF09976 Tetratricopeptide repeat-like domain CSW01_03955 PF13360 PQQ-like domain CSW01_03960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CSW01_03960 PF01926 50S ribosome-binding GTPase CSW01_03975 PF02601 Exonuclease VII, large subunit CSW01_03975 PF13742 OB-fold nucleic acid binding domain CSW01_03980 PF00478 IMP dehydrogenase / GMP reductase domain CSW01_03980 PF00571 CBS domain CSW01_03985 PF00958 GMP synthase C terminal domain CSW01_03985 PF00117 Glutamine amidotransferase class-I CSW01_03985 PF02540 NAD synthase CSW01_03990 PF00704 Glycosyl hydrolases family 18 CSW01_03990 PF06483 Chitinase C CSW01_03995 PF01184 GPR1/FUN34/yaaH family CSW01_04000 PF00857 Isochorismatase family CSW01_04000 PF00550 Phosphopantetheine attachment site CSW01_04005 PF13193 AMP-binding enzyme C-terminal domain CSW01_04005 PF00501 AMP-binding enzyme CSW01_04010 PF00425 chorismate binding enzyme CSW01_04025 PF01497 Periplasmic binding protein CSW01_04030 PF01032 FecCD transport family CSW01_04035 PF01032 FecCD transport family CSW01_04040 PF00005 ABC transporter CSW01_04045 PF01648 4'-phosphopantetheinyl transferase superfamily CSW01_04045 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CSW01_04050 PF03466 LysR substrate binding domain CSW01_04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_04055 PF00753 Metallo-beta-lactamase superfamily CSW01_04055 PF14863 Alkyl sulfatase dimerisation CSW01_04055 PF14864 Alkyl sulfatase C-terminal CSW01_04060 PF01235 Sodium:alanine symporter family CSW01_04065 PF01266 FAD dependent oxidoreductase CSW01_04070 PF03466 LysR substrate binding domain CSW01_04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_04085 PF12431 Transcriptional regulator CSW01_04085 PF00072 Response regulator receiver domain CSW01_04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_04090 PF17203 Single cache domain 3 CSW01_04095 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CSW01_04100 PF00364 Biotin-requiring enzyme CSW01_04100 PF00682 HMGL-like CSW01_04100 PF02436 Conserved carboxylase domain CSW01_04105 PF04277 Oxaloacetate decarboxylase, gamma chain CSW01_04110 PF03390 2-hydroxycarboxylate transporter family CSW01_04115 PF08218 Citrate lyase ligase C-terminal domain CSW01_04120 PF06857 Malonate decarboxylase delta subunit (MdcD) CSW01_04125 PF03328 HpcH/HpaI aldolase/citrate lyase family CSW01_04130 PF04223 Citrate lyase, alpha subunit (CitF) CSW01_04135 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CSW01_04140 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CSW01_04150 PF00588 SpoU rRNA Methylase family CSW01_04150 PF08032 RNA 2'-O ribose methyltransferase substrate binding CSW01_04155 PF11953 Domain of unknown function (DUF3470) CSW01_04155 PF00037 4Fe-4S binding domain CSW01_04225 PF00171 Aldehyde dehydrogenase family CSW01_04230 PF12561 ToxR activated gene A lipoprotein domain CSW01_04230 PF00041 Fibronectin type III domain CSW01_04245 PF08534 Redoxin CSW01_04250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_04255 PF00486 Transcriptional regulatory protein, C terminal CSW01_04265 PF05946 Toxin-coregulated pilus subunit TcpA CSW01_04265 PF07963 Prokaryotic N-terminal methylation motif CSW01_04275 PF10671 Toxin co-regulated pilus biosynthesis protein Q CSW01_04295 PF17456 Toxin-coregulated pilus protein S CSW01_04300 PF00437 Type II/IV secretion system protein CSW01_04305 PF00482 Type II secretion system (T2SS), protein F CSW01_04310 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F CSW01_04315 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family CSW01_04320 PF06750 Bacterial Peptidase A24 N-terminal domain CSW01_04320 PF01478 Type IV leader peptidase family CSW01_04325 PF00672 HAMP domain CSW01_04325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_04325 PF02743 Cache domain CSW01_04340 PF04225 Opacity-associated protein A LysM-like domain CSW01_04340 PF01551 Peptidase family M23 CSW01_04350 PF17291 N-terminal domain of M60-like peptidases CSW01_04350 PF13322 Domain of unknown function (DUF4092) CSW01_04350 PF13402 Peptidase M60, enhancin and enhancin-like CSW01_04355 PF13356 Arm DNA-binding domain CSW01_04355 PF00589 Phage integrase family CSW01_04365 PF00589 Phage integrase family CSW01_04365 PF13356 Arm DNA-binding domain CSW01_04375 PF01668 SmpB protein CSW01_04380 PF03364 Polyketide cyclase / dehydrase and lipid transport CSW01_04385 PF03658 RnfH family Ubiquitin CSW01_04390 PF04355 SmpA / OmlA family CSW01_04395 PF02463 RecF/RecN/SMC N terminal domain CSW01_04400 PF01513 ATP-NAD kinase CSW01_04405 PF01025 GrpE CSW01_04410 PF00012 Hsp70 protein CSW01_04415 PF01556 DnaJ C terminal domain CSW01_04415 PF00226 DnaJ domain CSW01_04415 PF00684 DnaJ central domain CSW01_04420 PF00114 Pilin (bacterial filament) CSW01_04420 PF07963 Prokaryotic N-terminal methylation motif CSW01_04425 PF14245 Type IV pilin PilA CSW01_04425 PF07963 Prokaryotic N-terminal methylation motif CSW01_04450 PF03806 AbgT putative transporter family CSW01_04455 PF14437 MafB19-like deaminase CSW01_04460 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_04460 PF01464 Transglycosylase SLT domain CSW01_04470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CSW01_04470 PF02769 AIR synthase related protein, C-terminal domain CSW01_04470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CSW01_04475 PF01797 Transposase IS200 like CSW01_04485 PF06786 Uncharacterised protein family (UPF0253) CSW01_04500 PF04073 Aminoacyl-tRNA editing domain CSW01_04500 PF03129 Anticodon binding domain CSW01_04500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW01_04505 PF01980 tRNA-methyltransferase O CSW01_04505 PF18389 TrmO C-terminal domain CSW01_04510 PF01197 Ribosomal protein L31 CSW01_04515 PF00444 Ribosomal protein L36 CSW01_04520 PF03806 AbgT putative transporter family CSW01_04525 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CSW01_04535 PF13302 Acetyltransferase (GNAT) domain CSW01_04550 PF04287 tRNA pseudouridine synthase C CSW01_04555 PF00849 RNA pseudouridylate synthase CSW01_04560 PF02779 Transketolase, pyrimidine binding domain CSW01_04560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CSW01_04560 PF02780 Transketolase, C-terminal domain CSW01_04565 PF00348 Polyprenyl synthetase CSW01_04570 PF02609 Exonuclease VII small subunit CSW01_04575 PF01618 MotA/TolQ/ExbB proton channel family CSW01_04580 PF13677 Membrane MotB of proton-channel complex MotA/MotB CSW01_04580 PF00691 OmpA family CSW01_04585 PF02568 Thiamine biosynthesis protein (ThiI) CSW01_04585 PF02926 THUMP domain CSW01_04590 PF03466 LysR substrate binding domain CSW01_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_04595 PF04241 Protein of unknown function (DUF423) CSW01_04600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSW01_04600 PF01367 5'-3' exonuclease, C-terminal SAM fold CSW01_04605 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CSW01_04605 PF11892 Domain of unknown function (DUF3412) CSW01_04605 PF03641 Possible lysine decarboxylase CSW01_04610 PF00990 Diguanylate cyclase, GGDEF domain CSW01_04620 PF14489 QueF-like protein CSW01_04620 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CSW01_04625 PF07348 Syd protein (SUKH-2) CSW01_04630 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CSW01_04635 PF03180 NLPA lipoprotein CSW01_04640 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_04645 PF09383 NIL domain CSW01_04645 PF00005 ABC transporter CSW01_04655 PF00356 Bacterial regulatory proteins, lacI family CSW01_04660 PF00367 phosphotransferase system, EIIB CSW01_04660 PF02378 Phosphotransferase system, EIIC CSW01_04665 PF16657 Maltogenic Amylase, C-terminal domain CSW01_04665 PF00128 Alpha amylase, catalytic domain CSW01_04690 PF13533 Biotin-lipoyl like CSW01_04695 PF00873 AcrB/AcrD/AcrF family CSW01_04700 PF01451 Low molecular weight phosphotyrosine protein phosphatase CSW01_04705 PF02350 UDP-N-acetylglucosamine 2-epimerase CSW01_04710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CSW01_04710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CSW01_04710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CSW01_04715 PF14602 Hexapeptide repeat of succinyl-transferase CSW01_04715 PF12464 Maltose acetyltransferase CSW01_04735 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_04745 PF00534 Glycosyl transferases group 1 CSW01_04745 PF00862 Sucrose synthase CSW01_04755 PF03808 Glycosyl transferase WecB/TagA/CpsF family CSW01_04770 PF12561 ToxR activated gene A lipoprotein domain CSW01_04770 PF17945 Beta/Gamma crystallin CSW01_04785 PF02397 Bacterial sugar transferase CSW01_04795 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CSW01_04795 PF02563 Polysaccharide biosynthesis/export protein CSW01_04795 PF10531 SLBB domain CSW01_04800 PF13807 G-rich domain on putative tyrosine kinase CSW01_04800 PF02706 Chain length determinant protein CSW01_04800 PF13614 AAA domain CSW01_04820 PF00464 Serine hydroxymethyltransferase CSW01_04830 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CSW01_04830 PF04055 Radical SAM superfamily CSW01_04835 PF03099 Biotin/lipoate A/B protein ligase family CSW01_04840 PF04359 Protein of unknown function (DUF493) CSW01_04845 PF07943 Penicillin-binding protein 5, C-terminal domain CSW01_04845 PF00768 D-alanyl-D-alanine carboxypeptidase CSW01_04850 PF03330 Lytic transglycolase CSW01_04850 PF05036 Sporulation related domain CSW01_04855 PF01098 Cell cycle protein CSW01_04860 PF00905 Penicillin binding protein transpeptidase domain CSW01_04860 PF03717 Penicillin-binding Protein dimerisation domain CSW01_04865 PF02590 Predicted SPOUT methyltransferase CSW01_04875 PF06144 DNA polymerase III, delta subunit CSW01_04875 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CSW01_04880 PF04390 Lipopolysaccharide-assembly CSW01_04885 PF13603 Leucyl-tRNA synthetase, Domain 2 CSW01_04885 PF08264 Anticodon-binding domain of tRNA CSW01_04885 PF00133 tRNA synthetases class I (I, L, M and V) CSW01_04890 PF07295 Zinc-ribbon containing domain CSW01_04895 PF00795 Carbon-nitrogen hydrolase CSW01_04900 PF00571 CBS domain CSW01_04900 PF03471 Transporter associated domain CSW01_04905 PF02130 Uncharacterized protein family UPF0054 CSW01_04910 PF02562 PhoH-like protein CSW01_04915 PF04055 Radical SAM superfamily CSW01_04915 PF00919 Uncharacterized protein family UPF0004 CSW01_04915 PF01938 TRAM domain CSW01_04920 PF01494 FAD binding domain CSW01_04925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSW01_04930 PF02896 PEP-utilising enzyme, TIM barrel domain CSW01_04930 PF00391 PEP-utilising enzyme, mobile domain CSW01_04930 PF05524 PEP-utilising enzyme, N-terminal CSW01_04935 PF00381 PTS HPr component phosphorylation site CSW01_04945 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_04955 PF04354 ZipA, C-terminal FtsZ-binding domain CSW01_04960 PF12826 Helix-hairpin-helix motif CSW01_04960 PF03120 NAD-dependent DNA ligase OB-fold domain CSW01_04960 PF01653 NAD-dependent DNA ligase adenylation domain CSW01_04960 PF00533 BRCA1 C Terminus (BRCT) domain CSW01_04960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CSW01_04965 PF13609 Gram-negative porin CSW01_04975 PF13411 MerR HTH family regulatory protein CSW01_04980 PF01957 NfeD-like C-terminal, partner-binding CSW01_04985 PF16200 C-terminal region of band_7 CSW01_04985 PF01145 SPFH domain / Band 7 family CSW01_04995 PF00085 Thioredoxin CSW01_05000 PF00106 short chain dehydrogenase CSW01_05005 PF08338 Domain of unknown function (DUF1731) CSW01_05005 PF01370 NAD dependent epimerase/dehydratase family CSW01_05010 PF12850 Calcineurin-like phosphoesterase superfamily domain CSW01_05020 PF17323 Trans-membrane regulatory protein ToxS CSW01_05025 PF00486 Transcriptional regulatory protein, C terminal CSW01_05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_05030 PF00183 Hsp90 protein CSW01_05035 PF05191 Adenylate kinase, active site lid CSW01_05040 PF00762 Ferrochelatase CSW01_05045 PF00854 POT family CSW01_05050 PF02357 Transcription termination factor nusG CSW01_05055 PF00733 Asparagine synthase CSW01_05055 PF13537 Glutamine amidotransferase domain CSW01_05060 PF00999 Sodium/hydrogen exchanger family CSW01_05060 PF02254 TrkA-N domain CSW01_05065 PF01047 MarR family CSW01_05065 PF00480 ROK family CSW01_05070 PF01979 Amidohydrolase family CSW01_05075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSW01_05075 PF02378 Phosphotransferase system, EIIC CSW01_05075 PF00367 phosphotransferase system, EIIB CSW01_05080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CSW01_05080 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSW01_05090 PF01416 tRNA pseudouridine synthase CSW01_05095 PF17848 Acetyl-coA carboxylase zinc finger domain CSW01_05095 PF01039 Carboxyl transferase domain CSW01_05100 PF08245 Mur ligase middle domain CSW01_05100 PF02875 Mur ligase family, glutamate ligase domain CSW01_05105 PF05036 Sporulation related domain CSW01_05110 PF02674 Colicin V production protein CSW01_05115 PF00156 Phosphoribosyl transferase domain CSW01_05120 PF13726 Na+-H+ antiporter family CSW01_05120 PF03553 Na+/H+ antiporter family CSW01_05125 PF00929 Exonuclease CSW01_05130 PF00691 OmpA family CSW01_05130 PF18393 MotY N-terminal domain CSW01_05135 PF10952 Protein of unknown function (DUF2753) CSW01_05140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_05145 PF00633 Helix-hairpin-helix motif CSW01_05145 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW01_05145 PF10576 Iron-sulfur binding domain of endonuclease III CSW01_05150 PF02508 Rnf-Nqr subunit, membrane protein CSW01_05155 PF04205 FMN-binding domain CSW01_05160 PF03116 NQR2, RnfD, RnfE family CSW01_05165 PF13375 RnfC Barrel sandwich hybrid domain CSW01_05165 PF10531 SLBB domain CSW01_05165 PF12838 4Fe-4S dicluster domain CSW01_05165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CSW01_05170 PF04060 Putative Fe-S cluster CSW01_05175 PF02508 Rnf-Nqr subunit, membrane protein CSW01_05185 PF04851 Type III restriction enzyme, res subunit CSW01_05185 PF17757 UvrB interaction domain CSW01_05185 PF02151 UvrB/uvrC motif CSW01_05185 PF12344 Ultra-violet resistance protein B CSW01_05185 PF00271 Helicase conserved C-terminal domain CSW01_05195 PF02954 Bacterial regulatory protein, Fis family CSW01_05195 PF00072 Response regulator receiver domain CSW01_05195 PF00158 Sigma-54 interaction domain CSW01_05200 PF01627 Hpt domain CSW01_05205 PF01933 Uncharacterised protein family UPF0052 CSW01_05210 PF04055 Radical SAM superfamily CSW01_05210 PF06463 Molybdenum Cofactor Synthesis C CSW01_05215 PF00994 Probable molybdopterin binding domain CSW01_05220 PF01967 MoaC family CSW01_05225 PF02597 ThiS family CSW01_05230 PF02391 MoaE protein CSW01_05235 PF00990 Diguanylate cyclase, GGDEF domain CSW01_05235 PF07694 5TMR of 5TMR-LYT CSW01_05240 PF00571 CBS domain CSW01_05240 PF03061 Thioesterase superfamily CSW01_05240 PF07085 DRTGG domain CSW01_05240 PF00392 Bacterial regulatory proteins, gntR family CSW01_05250 PF00403 Heavy-metal-associated domain CSW01_05255 PF01048 Phosphorylase superfamily CSW01_05265 PF01588 Putative tRNA binding domain CSW01_05265 PF09334 tRNA synthetases class I (M) CSW01_05270 PF10609 NUBPL iron-transfer P-loop NTPase CSW01_05280 PF00485 Phosphoribulokinase / Uridine kinase family CSW01_05285 PF05170 AsmA family CSW01_05290 PF12557 Cob(I)alamin adenosyltransferase N terminal CSW01_05290 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CSW01_05295 PF01451 Low molecular weight phosphotyrosine protein phosphatase CSW01_05300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CSW01_05305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CSW01_05315 PF08281 Sigma-70, region 4 CSW01_05315 PF04542 Sigma-70 region 2 CSW01_05325 PF02803 Thiolase, C-terminal domain CSW01_05325 PF00108 Thiolase, N-terminal domain CSW01_05330 PF00378 Enoyl-CoA hydratase/isomerase CSW01_05330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSW01_05330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSW01_05335 PF00881 Nitroreductase family CSW01_05340 PF03466 LysR substrate binding domain CSW01_05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_05345 PF00072 Response regulator receiver domain CSW01_05355 PF04304 Protein of unknown function (DUF454) CSW01_05360 PF00156 Phosphoribosyl transferase domain CSW01_05365 PF12169 DNA polymerase III subunits gamma and tau domain III CSW01_05365 PF12170 DNA polymerase III tau subunit V interacting with alpha CSW01_05365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CSW01_05370 PF02575 YbaB/EbfC DNA-binding family CSW01_05375 PF13662 Toprim domain CSW01_05375 PF02132 RecR protein CSW01_05380 PF03692 Putative zinc- or iron-chelating domain CSW01_05385 PF03692 Putative zinc- or iron-chelating domain CSW01_05390 PF00106 short chain dehydrogenase CSW01_05395 PF01343 Peptidase family S49 CSW01_05395 PF08496 Peptidase family S49 N-terminal CSW01_05400 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_05405 PF01037 Lrp/AsnC ligand binding domain CSW01_05405 PF13404 AsnC-type helix-turn-helix domain CSW01_05420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSW01_05430 PF08448 PAS fold CSW01_05430 PF00990 Diguanylate cyclase, GGDEF domain CSW01_05440 PF01022 Bacterial regulatory protein, arsR family CSW01_05445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSW01_05445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSW01_05460 PF06483 Chitinase C CSW01_05460 PF00704 Glycosyl hydrolases family 18 CSW01_05470 PF01161 Phosphatidylethanolamine-binding protein CSW01_05490 PF03481 Putative GTP-binding controlling metal-binding CSW01_05490 PF01300 Telomere recombination CSW01_05505 PF00072 Response regulator receiver domain CSW01_05515 PF13188 PAS domain CSW01_05515 PF13426 PAS domain CSW01_05515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_05515 PF00512 His Kinase A (phospho-acceptor) domain CSW01_05515 PF00989 PAS fold CSW01_05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_05520 PF00512 His Kinase A (phospho-acceptor) domain CSW01_05525 PF03707 Bacterial signalling protein N terminal repeat CSW01_05525 PF00990 Diguanylate cyclase, GGDEF domain CSW01_05525 PF00563 EAL domain CSW01_05525 PF13188 PAS domain CSW01_05530 PF02954 Bacterial regulatory protein, Fis family CSW01_05530 PF00072 Response regulator receiver domain CSW01_05530 PF00158 Sigma-54 interaction domain CSW01_05535 PF13188 PAS domain CSW01_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_05535 PF08448 PAS fold CSW01_05535 PF00512 His Kinase A (phospho-acceptor) domain CSW01_05535 PF00072 Response regulator receiver domain CSW01_05545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_05550 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_05555 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_05555 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW01_05560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_05560 PF00005 ABC transporter CSW01_05565 PF00005 ABC transporter CSW01_05565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_05570 PF13409 Glutathione S-transferase, N-terminal domain CSW01_05575 PF01515 Phosphate acetyl/butaryl transferase CSW01_05575 PF07085 DRTGG domain CSW01_05580 PF00871 Acetokinase family CSW01_05585 PF04217 Protein of unknown function, DUF412 CSW01_05590 PF09905 DNA-binding protein VF530 CSW01_05600 PF02653 Branched-chain amino acid transport system / permease component CSW01_05605 PF00005 ABC transporter CSW01_05610 PF00990 Diguanylate cyclase, GGDEF domain CSW01_05615 PF01207 Dihydrouridine synthase (Dus) CSW01_05620 PF01043 SecA preprotein cross-linking domain CSW01_05620 PF07517 SecA DEAD-like domain CSW01_05620 PF02810 SEC-C motif CSW01_05620 PF07516 SecA Wing and Scaffold domain CSW01_05625 PF03548 Outer membrane lipoprotein carrier protein LolA CSW01_05630 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_05630 PF16193 AAA C-terminal domain CSW01_05630 PF12002 MgsA AAA+ ATPase C terminal CSW01_05635 PF02403 Seryl-tRNA synthetase N-terminal domain CSW01_05635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW01_05640 PF00202 Aminotransferase class-III CSW01_05645 PF06968 Biotin and Thiamin Synthesis associated domain CSW01_05645 PF04055 Radical SAM superfamily CSW01_05650 PF00155 Aminotransferase class I and II CSW01_05655 PF08241 Methyltransferase domain CSW01_05670 PF01435 Peptidase family M48 CSW01_05680 PF00106 short chain dehydrogenase CSW01_05705 PF16036 Chalcone isomerase-like CSW01_05715 PF08328 Adenylosuccinate lyase C-terminal CSW01_05715 PF00206 Lyase CSW01_05720 PF04356 Protein of unknown function (DUF489) CSW01_05730 PF00294 pfkB family carbohydrate kinase CSW01_05735 PF00816 H-NS histone family CSW01_05740 PF03553 Na+/H+ antiporter family CSW01_05745 PF08029 HisG, C-terminal domain CSW01_05745 PF01634 ATP phosphoribosyltransferase CSW01_05750 PF00815 Histidinol dehydrogenase CSW01_05755 PF00155 Aminotransferase class I and II CSW01_05760 PF08645 Polynucleotide kinase 3 phosphatase CSW01_05760 PF00475 Imidazoleglycerol-phosphate dehydratase CSW01_05765 PF00117 Glutamine amidotransferase class-I CSW01_05770 PF00977 Histidine biosynthesis protein CSW01_05775 PF00977 Histidine biosynthesis protein CSW01_05780 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CSW01_05780 PF01502 Phosphoribosyl-AMP cyclohydrolase CSW01_05785 PF00849 RNA pseudouridylate synthase CSW01_05790 PF03971 Monomeric isocitrate dehydrogenase CSW01_05795 PF00313 'Cold-shock' DNA-binding domain CSW01_05800 PF02617 ATP-dependent Clp protease adaptor protein ClpS CSW01_05805 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_05805 PF17871 AAA lid domain CSW01_05805 PF10431 C-terminal, D2-small domain, of ClpB protein CSW01_05805 PF02861 Clp amino terminal domain, pathogenicity island component CSW01_05805 PF07724 AAA domain (Cdc48 subfamily) CSW01_05810 PF06826 Predicted Permease Membrane Region CSW01_05810 PF02080 TrkA-C domain CSW01_05815 PF00462 Glutaredoxin CSW01_05820 PF00171 Aldehyde dehydrogenase family CSW01_05820 PF00465 Iron-containing alcohol dehydrogenase CSW01_05825 PF01418 Helix-turn-helix domain, rpiR family CSW01_05825 PF01380 SIS domain CSW01_05830 PF00282 Pyridoxal-dependent decarboxylase conserved domain CSW01_05840 PF03956 Lysine exporter LysO CSW01_05850 PF04994 TfoX C-terminal domain CSW01_05850 PF04993 TfoX N-terminal domain CSW01_05865 PF00989 PAS fold CSW01_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_05865 PF00512 His Kinase A (phospho-acceptor) domain CSW01_05875 PF00266 Aminotransferase class-V CSW01_05890 PF18030 RimK PreATP-grasp domain CSW01_05890 PF08443 RimK-like ATP-grasp domain CSW01_05895 PF08003 Protein of unknown function (DUF1698) CSW01_05900 PF13649 Methyltransferase domain CSW01_05905 PF01904 Protein of unknown function DUF72 CSW01_05910 PF02938 GAD domain CSW01_05910 PF01336 OB-fold nucleic acid binding domain CSW01_05910 PF00152 tRNA synthetases class II (D, K and N) CSW01_05915 PF00265 Thymidine kinase CSW01_05920 PF00375 Sodium:dicarboxylate symporter family CSW01_05925 PF00290 Tryptophan synthase alpha chain CSW01_05930 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_05935 PF00218 Indole-3-glycerol phosphate synthase CSW01_05935 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CSW01_05940 PF00591 Glycosyl transferase family, a/b domain CSW01_05940 PF02885 Glycosyl transferase family, helical bundle domain CSW01_05945 PF00117 Glutamine amidotransferase class-I CSW01_05950 PF00425 chorismate binding enzyme CSW01_05950 PF04715 Anthranilate synthase component I, N terminal region CSW01_05955 PF08056 Tryptophan operon leader peptide CSW01_05960 PF02811 PHP domain CSW01_05965 PF01300 Telomere recombination CSW01_05970 PF01479 S4 domain CSW01_05970 PF00849 RNA pseudouridylate synthase CSW01_05975 PF00005 ABC transporter CSW01_05975 PF00664 ABC transporter transmembrane region CSW01_05980 PF00664 ABC transporter transmembrane region CSW01_05980 PF00005 ABC transporter CSW01_05985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_05995 PF00266 Aminotransferase class-V CSW01_06000 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06000 PF08448 PAS fold CSW01_06005 PF02698 DUF218 domain CSW01_06015 PF00390 Malic enzyme, N-terminal domain CSW01_06015 PF03949 Malic enzyme, NAD binding domain CSW01_06025 PF01259 SAICAR synthetase CSW01_06045 PF00691 OmpA family CSW01_06045 PF13488 Glycine zipper CSW01_06060 PF02913 FAD linked oxidases, C-terminal domain CSW01_06060 PF01565 FAD binding domain CSW01_06060 PF13183 4Fe-4S dicluster domain CSW01_06065 PF04191 Phospholipid methyltransferase CSW01_06070 PF00089 Trypsin CSW01_06080 PF00221 Aromatic amino acid lyase CSW01_06085 PF17391 Urocanase N-terminal domain CSW01_06085 PF01175 Urocanase Rossmann-like domain CSW01_06085 PF17392 Urocanase C-terminal domain CSW01_06090 PF00491 Arginase family CSW01_06095 PF01979 Amidohydrolase family CSW01_06100 PF07702 UTRA domain CSW01_06100 PF00392 Bacterial regulatory proteins, gntR family CSW01_06110 PF04269 Protein of unknown function, DUF440 CSW01_06115 PF08207 Elongation factor P (EF-P) KOW-like domain CSW01_06115 PF09285 Elongation factor P, C-terminal CSW01_06115 PF01132 Elongation factor P (EF-P) OB domain CSW01_06125 PF00563 EAL domain CSW01_06125 PF13426 PAS domain CSW01_06125 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06130 PF03104 DNA polymerase family B, exonuclease domain CSW01_06130 PF00136 DNA polymerase family B CSW01_06135 PF00196 Bacterial regulatory proteins, luxR family CSW01_06135 PF00072 Response regulator receiver domain CSW01_06140 PF02151 UvrB/uvrC motif CSW01_06140 PF01541 GIY-YIG catalytic domain CSW01_06140 PF08459 UvrC Helix-hairpin-helix N-terminal CSW01_06145 PF01066 CDP-alcohol phosphatidyltransferase CSW01_06170 PF00072 Response regulator receiver domain CSW01_06170 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06180 PF01409 tRNA synthetases class II core domain (F) CSW01_06180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CSW01_06185 PF03147 Ferredoxin-fold anticodon binding domain CSW01_06185 PF01588 Putative tRNA binding domain CSW01_06185 PF03484 tRNA synthetase B5 domain CSW01_06185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CSW01_06185 PF03483 B3/4 domain CSW01_06190 PF00216 Bacterial DNA-binding protein CSW01_06205 PF05724 Thiopurine S-methyltransferase (TPMT) CSW01_06215 PF02222 ATP-grasp domain CSW01_06225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CSW01_06225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW01_06230 PF04172 LrgB-like family CSW01_06235 PF03788 LrgA family CSW01_06240 PF00929 Exonuclease CSW01_06240 PF08411 Exonuclease C-terminal CSW01_06250 PF01641 SelR domain CSW01_06260 PF02277 Phosphoribosyltransferase CSW01_06265 PF02654 Cobalamin-5-phosphate synthase CSW01_06270 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CSW01_06280 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CSW01_06285 PF01032 FecCD transport family CSW01_06290 PF00005 ABC transporter CSW01_06305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_06305 PF17200 Single Cache domain 2 CSW01_06305 PF00672 HAMP domain CSW01_06320 PF00994 Probable molybdopterin binding domain CSW01_06335 PF00175 Oxidoreductase NAD-binding domain CSW01_06335 PF00111 2Fe-2S iron-sulfur cluster binding domain CSW01_06335 PF00970 Oxidoreductase FAD-binding domain CSW01_06340 PF00268 Ribonucleotide reductase, small chain CSW01_06345 PF03477 ATP cone domain CSW01_06345 PF02867 Ribonucleotide reductase, barrel domain CSW01_06345 PF00317 Ribonucleotide reductase, all-alpha domain CSW01_06355 PF00521 DNA gyrase/topoisomerase IV, subunit A CSW01_06355 PF03989 DNA gyrase C-terminal domain, beta-propeller CSW01_06370 PF07690 Major Facilitator Superfamily CSW01_06380 PF00925 GTP cyclohydrolase II CSW01_06405 PF03734 L,D-transpeptidase catalytic domain CSW01_06405 PF01471 Putative peptidoglycan binding domain CSW01_06410 PF05951 Bacterial protein of unknown function (DUF882) CSW01_06415 PF00753 Metallo-beta-lactamase superfamily CSW01_06430 PF03480 Bacterial extracellular solute-binding protein, family 7 CSW01_06440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CSW01_06450 PF17200 Single Cache domain 2 CSW01_06450 PF07730 Histidine kinase CSW01_06455 PF00196 Bacterial regulatory proteins, luxR family CSW01_06455 PF00072 Response regulator receiver domain CSW01_06460 PF01047 MarR family CSW01_06465 PF02028 BCCT, betaine/carnitine/choline family transporter CSW01_06470 PF01522 Polysaccharide deacetylase CSW01_06475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW01_06480 PF02378 Phosphotransferase system, EIIC CSW01_06485 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSW01_06490 PF02056 Family 4 glycosyl hydrolase CSW01_06490 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSW01_06495 PF04794 YdjC-like protein CSW01_06500 PF00356 Bacterial regulatory proteins, lacI family CSW01_06505 PF13506 Glycosyl transferase family 21 CSW01_06510 PF04349 Periplasmic glucan biosynthesis protein, MdoG CSW01_06515 PF00672 HAMP domain CSW01_06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_06515 PF17200 Single Cache domain 2 CSW01_06530 PF00155 Aminotransferase class I and II CSW01_06540 PF01966 HD domain CSW01_06540 PF00672 HAMP domain CSW01_06545 PF08543 Phosphomethylpyrimidine kinase CSW01_06550 PF01336 OB-fold nucleic acid binding domain CSW01_06550 PF00152 tRNA synthetases class II (D, K and N) CSW01_06555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_06555 PF00672 HAMP domain CSW01_06560 PF01242 6-pyruvoyl tetrahydropterin synthase CSW01_06565 PF03313 Serine dehydratase alpha chain CSW01_06565 PF03315 Serine dehydratase beta chain CSW01_06570 PF03222 Tryptophan/tyrosine permease family CSW01_06575 PF00293 NUDIX domain CSW01_06580 PF00425 chorismate binding enzyme CSW01_06580 PF04715 Anthranilate synthase component I, N terminal region CSW01_06595 PF04317 YcjX-like family, DUF463 CSW01_06600 PF05128 Domain of unknown function (DUF697) CSW01_06605 PF00158 Sigma-54 interaction domain CSW01_06605 PF18024 Helix-turn-helix domain CSW01_06610 PF13302 Acetyltransferase (GNAT) domain CSW01_06620 PF00892 EamA-like transporter family CSW01_06625 PF01168 Alanine racemase, N-terminal domain CSW01_06625 PF00842 Alanine racemase, C-terminal domain CSW01_06630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_06630 PF00672 HAMP domain CSW01_06635 PF00939 Sodium:sulfate symporter transmembrane region CSW01_06640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_06640 PF00512 His Kinase A (phospho-acceptor) domain CSW01_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_06645 PF00158 Sigma-54 interaction domain CSW01_06645 PF00072 Response regulator receiver domain CSW01_06645 PF02954 Bacterial regulatory protein, Fis family CSW01_06650 PF04393 Protein of unknown function (DUF535) CSW01_06655 PF06629 MltA-interacting protein MipA CSW01_06660 PF00512 His Kinase A (phospho-acceptor) domain CSW01_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_06660 PF00672 HAMP domain CSW01_06665 PF00072 Response regulator receiver domain CSW01_06665 PF00486 Transcriptional regulatory protein, C terminal CSW01_06690 PF13407 Periplasmic binding protein domain CSW01_06695 PF00005 ABC transporter CSW01_06700 PF02653 Branched-chain amino acid transport system / permease component CSW01_06715 PF01970 Tripartite tricarboxylate transporter TctA family CSW01_06730 PF00392 Bacterial regulatory proteins, gntR family CSW01_06730 PF07729 FCD domain CSW01_06740 PF00285 Citrate synthase, C-terminal domain CSW01_06745 PF00330 Aconitase family (aconitate hydratase) CSW01_06745 PF00694 Aconitase C-terminal domain CSW01_06750 PF04303 PrpF protein CSW01_06755 PF16177 Acetyl-coenzyme A synthetase N-terminus CSW01_06755 PF13193 AMP-binding enzyme C-terminal domain CSW01_06755 PF00501 AMP-binding enzyme CSW01_06770 PF07687 Peptidase dimerisation domain CSW01_06770 PF01546 Peptidase family M20/M25/M40 CSW01_06775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_06780 PF04209 homogentisate 1,2-dioxygenase CSW01_06790 PF02798 Glutathione S-transferase, N-terminal domain CSW01_06790 PF14497 Glutathione S-transferase, C-terminal domain CSW01_06795 PF00072 Response regulator receiver domain CSW01_06800 PF00072 Response regulator receiver domain CSW01_06800 PF01627 Hpt domain CSW01_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_06800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CSW01_06800 PF00672 HAMP domain CSW01_06800 PF00512 His Kinase A (phospho-acceptor) domain CSW01_06805 PF00462 Glutaredoxin CSW01_06805 PF08534 Redoxin CSW01_06815 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06820 PF17785 PUA-like domain CSW01_06820 PF10672 S-adenosylmethionine-dependent methyltransferase CSW01_06825 PF00708 Acylphosphatase CSW01_06830 PF04358 DsrC like protein CSW01_06835 PF01027 Inhibitor of apoptosis-promoting Bax1 CSW01_06840 PF00005 ABC transporter CSW01_06845 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_06850 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_06855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_06860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW01_06860 PF14824 Sirohaem biosynthesis protein central CSW01_06860 PF10414 Sirohaem synthase dimerisation region CSW01_06870 PF04055 Radical SAM superfamily CSW01_06875 PF06508 Queuosine biosynthesis protein QueC CSW01_06895 PF03707 Bacterial signalling protein N terminal repeat CSW01_06895 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06895 PF00563 EAL domain CSW01_06905 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06905 PF17158 Membrane-associated sensor, integral membrane domain CSW01_06910 PF00012 Hsp70 protein CSW01_06915 PF00012 Hsp70 protein CSW01_06930 PF00990 Diguanylate cyclase, GGDEF domain CSW01_06930 PF00563 EAL domain CSW01_06930 PF03707 Bacterial signalling protein N terminal repeat CSW01_06950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CSW01_06950 PF00271 Helicase conserved C-terminal domain CSW01_06950 PF11898 Domain of unknown function (DUF3418) CSW01_06950 PF04408 Helicase associated domain (HA2) CSW01_06950 PF00270 DEAD/DEAH box helicase CSW01_06960 PF00012 Hsp70 protein CSW01_06965 PF10437 Bacterial lipoate protein ligase C-terminus CSW01_06965 PF03099 Biotin/lipoate A/B protein ligase family CSW01_06975 PF03466 LysR substrate binding domain CSW01_06975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_06980 PF07690 Major Facilitator Superfamily CSW01_06985 PF00875 DNA photolyase CSW01_06985 PF03441 FAD binding domain of DNA photolyase CSW01_06990 PF00893 Small Multidrug Resistance protein CSW01_06995 PF00672 HAMP domain CSW01_06995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_07010 PF07194 P2 response regulator binding domain CSW01_07010 PF02895 Signal transducing histidine kinase, homodimeric domain CSW01_07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_07010 PF01584 CheW-like domain CSW01_07010 PF01627 Hpt domain CSW01_07015 PF01584 CheW-like domain CSW01_07015 PF00072 Response regulator receiver domain CSW01_07015 PF01627 Hpt domain CSW01_07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_07030 PF01339 CheB methylesterase CSW01_07030 PF00072 Response regulator receiver domain CSW01_07035 PF01584 CheW-like domain CSW01_07040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_07040 PF17202 Single cache domain 3 CSW01_07040 PF00672 HAMP domain CSW01_07045 PF12729 Four helix bundle sensory module for signal transduction CSW01_07045 PF00672 HAMP domain CSW01_07045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_07050 PF13426 PAS domain CSW01_07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_07050 PF08447 PAS fold CSW01_07055 PF00270 DEAD/DEAH box helicase CSW01_07055 PF00271 Helicase conserved C-terminal domain CSW01_07065 PF02321 Outer membrane efflux protein CSW01_07070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_07070 PF00529 HlyD membrane-fusion protein of T1SS CSW01_07075 PF07690 Major Facilitator Superfamily CSW01_07080 PF02743 Cache domain CSW01_07080 PF00672 HAMP domain CSW01_07080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_07085 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CSW01_07090 PF05638 Type VI secretion system effector, Hcp CSW01_07095 PF04717 Type VI secretion system, phage-baseplate injector CSW01_07095 PF16671 Actin cross-linking domain CSW01_07120 PF01810 LysE type translocator CSW01_07125 PF01235 Sodium:alanine symporter family CSW01_07140 PF13416 Bacterial extracellular solute-binding protein CSW01_07145 PF13416 Bacterial extracellular solute-binding protein CSW01_07150 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_07155 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_07160 PF08402 TOBE domain CSW01_07160 PF00005 ABC transporter CSW01_07180 PF01171 PP-loop family CSW01_07185 PF00582 Universal stress protein family CSW01_07190 PF00027 Cyclic nucleotide-binding domain CSW01_07190 PF13545 Crp-like helix-turn-helix domain CSW01_07205 PF00403 Heavy-metal-associated domain CSW01_07215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CSW01_07215 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CSW01_07230 PF00115 Cytochrome C and Quinol oxidase polypeptide I CSW01_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_07245 PF00512 His Kinase A (phospho-acceptor) domain CSW01_07245 PF00072 Response regulator receiver domain CSW01_07245 PF09308 LuxQ, periplasmic CSW01_07250 PF00664 ABC transporter transmembrane region CSW01_07250 PF00005 ABC transporter CSW01_07250 PF03412 Peptidase C39 family CSW01_07260 PF03412 Peptidase C39 family CSW01_07260 PF00664 ABC transporter transmembrane region CSW01_07260 PF00005 ABC transporter CSW01_07270 PF02794 RTX toxin acyltransferase family CSW01_07275 PF11647 Membrane Localization Domain CSW01_07275 PF11713 Peptidase C80 family CSW01_07275 PF12146 Serine aminopeptidase, S33 CSW01_07275 PF16671 Actin cross-linking domain CSW01_07275 PF07634 RtxA repeat CSW01_07295 PF01381 Helix-turn-helix CSW01_07305 PF01376 Heat-labile enterotoxin beta chain CSW01_07310 PF01375 Heat-labile enterotoxin alpha chain CSW01_07315 PF05707 Zonular occludens toxin (Zot) CSW01_07320 PF10734 Protein of unknown function (DUF2523) CSW01_07325 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII CSW01_07345 PF01381 Helix-turn-helix CSW01_07445 PF06303 MatP N-terminal domain CSW01_07445 PF17414 MatP C-terminal ribbon-helix-helix domain CSW01_07450 PF05362 Lon protease (S16) C-terminal proteolytic domain CSW01_07450 PF13654 AAA domain CSW01_07455 PF07977 FabA-like domain CSW01_07460 PF04957 Ribosome modulation factor CSW01_07480 PF10672 S-adenosylmethionine-dependent methyltransferase CSW01_07480 PF02926 THUMP domain CSW01_07480 PF01170 Putative RNA methylase family UPF0020 CSW01_07485 PF07126 Cell-division protein ZapC CSW01_07490 PF01180 Dihydroorotate dehydrogenase CSW01_07495 PF05088 Bacterial NAD-glutamate dehydrogenase CSW01_07505 PF11940 Domain of unknown function (DUF3458) Ig-like fold CSW01_07505 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CSW01_07505 PF01433 Peptidase family M1 domain CSW01_07515 PF00595 PDZ domain CSW01_07515 PF11818 C-terminal domain of tail specific protease (DUF3340) CSW01_07515 PF03572 Peptidase family S41 CSW01_07515 PF17804 Tail specific protease N-terminal domain CSW01_07520 PF04352 ProQ/FINO family CSW01_07520 PF17516 ProQ C-terminal domain CSW01_07525 PF13185 GAF domain CSW01_07530 PF00005 ABC transporter CSW01_07530 PF00664 ABC transporter transmembrane region CSW01_07535 PF04403 Paraquat-inducible protein A CSW01_07540 PF02470 MlaD protein CSW01_07545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CSW01_07545 PF01189 16S rRNA methyltransferase RsmB/F CSW01_07545 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CSW01_07550 PF17783 CvfB-like winged helix domain CSW01_07550 PF13509 S1 domain CSW01_07565 PF00793 DAHP synthetase I family CSW01_07570 PF04461 Protein of unknown function (DUF520) CSW01_07575 PF02146 Sir2 family CSW01_07590 PF13247 4Fe-4S dicluster domain CSW01_07595 PF01568 Molydopterin dinucleotide binding domain CSW01_07595 PF00384 Molybdopterin oxidoreductase CSW01_07595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSW01_07605 PF02613 Nitrate reductase delta subunit CSW01_07625 PF02634 FdhD/NarQ family CSW01_07630 PF12848 ABC transporter CSW01_07630 PF00005 ABC transporter CSW01_07635 PF00989 PAS fold CSW01_07635 PF00512 His Kinase A (phospho-acceptor) domain CSW01_07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_07640 PF00072 Response regulator receiver domain CSW01_07640 PF02954 Bacterial regulatory protein, Fis family CSW01_07640 PF00158 Sigma-54 interaction domain CSW01_07645 PF12849 PBP superfamily domain CSW01_07650 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_07655 PF00005 ABC transporter CSW01_07655 PF08402 TOBE domain CSW01_07660 PF12804 MobA-like NTP transferase domain CSW01_07665 PF00994 Probable molybdopterin binding domain CSW01_07665 PF03454 MoeA C-terminal region (domain IV) CSW01_07665 PF03453 MoeA N-terminal region (domain I and II) CSW01_07695 PF00480 ROK family CSW01_07710 PF02743 Cache domain CSW01_07710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_07710 PF00672 HAMP domain CSW01_07715 PF00877 NlpC/P60 family CSW01_07735 PF01554 MatE CSW01_07745 PF14743 DNA ligase OB-like domain CSW01_07745 PF01068 ATP dependent DNA ligase domain CSW01_07760 PF03544 Gram-negative bacterial TonB protein C-terminal CSW01_07765 PF02472 Biopolymer transport protein ExbD/TolR CSW01_07770 PF01618 MotA/TolQ/ExbB proton channel family CSW01_07775 PF01618 MotA/TolQ/ExbB proton channel family CSW01_07785 PF13416 Bacterial extracellular solute-binding protein CSW01_07790 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_07795 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_07800 PF00005 ABC transporter CSW01_07800 PF17912 MalK OB fold domain CSW01_07805 PF00455 DeoR C terminal sensor domain CSW01_07805 PF08220 DeoR-like helix-turn-helix domain CSW01_07810 PF03009 Glycerophosphoryl diester phosphodiesterase family CSW01_07815 PF04074 YhcH/YjgK/YiaL CSW01_07820 PF01042 Endoribonuclease L-PSP CSW01_07825 PF00356 Bacterial regulatory proteins, lacI family CSW01_07830 PF00232 Glycosyl hydrolase family 1 CSW01_07835 PF00141 Peroxidase CSW01_07840 PF03466 LysR substrate binding domain CSW01_07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_07850 PF00529 HlyD membrane-fusion protein of T1SS CSW01_07860 PF00005 ABC transporter CSW01_07860 PF02687 FtsX-like permease family CSW01_07860 PF12704 MacB-like periplasmic core domain CSW01_07865 PF00005 ABC transporter CSW01_07865 PF02687 FtsX-like permease family CSW01_07865 PF12704 MacB-like periplasmic core domain CSW01_07870 PF12704 MacB-like periplasmic core domain CSW01_07870 PF02687 FtsX-like permease family CSW01_07870 PF00005 ABC transporter CSW01_07875 PF02322 Cytochrome bd terminal oxidase subunit II CSW01_07880 PF01654 Cytochrome bd terminal oxidase subunit I CSW01_07895 PF00206 Lyase CSW01_07895 PF10415 Fumarase C C-terminus CSW01_07925 PF00501 AMP-binding enzyme CSW01_07925 PF13193 AMP-binding enzyme C-terminal domain CSW01_07930 PF03466 LysR substrate binding domain CSW01_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_07935 PF00361 Proton-conducting membrane transporter CSW01_07935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CSW01_07940 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CSW01_07945 PF00080 Copper/zinc superoxide dismutase (SODC) CSW01_07955 PF06628 Catalase-related immune-responsive CSW01_07955 PF00199 Catalase CSW01_07965 PF03466 LysR substrate binding domain CSW01_07965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_07970 PF03306 Alpha-acetolactate decarboxylase CSW01_07975 PF00205 Thiamine pyrophosphate enzyme, central domain CSW01_07975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW01_07975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW01_07985 PF00990 Diguanylate cyclase, GGDEF domain CSW01_07985 PF00672 HAMP domain CSW01_07985 PF17154 Gammaproteobacterial periplasmic sensor domain CSW01_07985 PF00563 EAL domain CSW01_07990 PF00990 Diguanylate cyclase, GGDEF domain CSW01_07995 PF01263 Aldose 1-epimerase CSW01_08000 PF08544 GHMP kinases C terminal CSW01_08000 PF10509 Galactokinase galactose-binding signature CSW01_08000 PF00288 GHMP kinases N terminal domain CSW01_08005 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CSW01_08005 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CSW01_08010 PF07690 Major Facilitator Superfamily CSW01_08030 PF00072 Response regulator receiver domain CSW01_08030 PF00990 Diguanylate cyclase, GGDEF domain CSW01_08050 PF00072 Response regulator receiver domain CSW01_08050 PF01584 CheW-like domain CSW01_08060 PF12431 Transcriptional regulator CSW01_08060 PF00072 Response regulator receiver domain CSW01_08065 PF17203 Single cache domain 3 CSW01_08065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CSW01_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_08065 PF00989 PAS fold CSW01_08080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_08100 PF04204 Homoserine O-succinyltransferase CSW01_08115 PF05971 RNA methyltransferase CSW01_08120 PF01863 Protein of unknown function DUF45 CSW01_08130 PF03466 LysR substrate binding domain CSW01_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_08150 PF02321 Outer membrane efflux protein CSW01_08155 PF00691 OmpA family CSW01_08155 PF05736 OprF membrane domain CSW01_08165 PF16653 Saccharopine dehydrogenase C-terminal domain CSW01_08165 PF03435 Saccharopine dehydrogenase NADP binding domain CSW01_08170 PF00202 Aminotransferase class-III CSW01_08180 PF06965 Na+/H+ antiporter 1 CSW01_08195 PF00005 ABC transporter CSW01_08200 PF01554 MatE CSW01_08205 PF11066 Protein of unknown function (DUF2867) CSW01_08205 PF13460 NAD(P)H-binding CSW01_08215 PF07690 Major Facilitator Superfamily CSW01_08220 PF00849 RNA pseudouridylate synthase CSW01_08220 PF01479 S4 domain CSW01_08225 PF00271 Helicase conserved C-terminal domain CSW01_08225 PF04851 Type III restriction enzyme, res subunit CSW01_08235 PF00486 Transcriptional regulatory protein, C terminal CSW01_08235 PF00072 Response regulator receiver domain CSW01_08245 PF01386 Ribosomal L25p family CSW01_08250 PF00563 EAL domain CSW01_08250 PF01590 GAF domain CSW01_08250 PF00990 Diguanylate cyclase, GGDEF domain CSW01_08250 PF00360 Phytochrome region CSW01_08265 PF00672 HAMP domain CSW01_08265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_08265 PF12729 Four helix bundle sensory module for signal transduction CSW01_08285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_08285 PF12793 Sugar transport-related sRNA regulator N-term CSW01_08295 PF01752 Collagenase CSW01_08295 PF08453 Peptidase family M9 N-terminal CSW01_08295 PF04151 Bacterial pre-peptidase C-terminal domain CSW01_08305 PF00990 Diguanylate cyclase, GGDEF domain CSW01_08305 PF03707 Bacterial signalling protein N terminal repeat CSW01_08305 PF00563 EAL domain CSW01_08310 PF09308 LuxQ, periplasmic CSW01_08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_08310 PF00072 Response regulator receiver domain CSW01_08310 PF00512 His Kinase A (phospho-acceptor) domain CSW01_08315 PF03448 MgtE intracellular N domain CSW01_08315 PF01769 Divalent cation transporter CSW01_08315 PF00571 CBS domain CSW01_08325 PF03222 Tryptophan/tyrosine permease family CSW01_08330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_08335 PF00005 ABC transporter CSW01_08350 PF06945 Protein of unknown function (DUF1289) CSW01_08360 PF13416 Bacterial extracellular solute-binding protein CSW01_08365 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_08370 PF00005 ABC transporter CSW01_08375 PF01066 CDP-alcohol phosphatidyltransferase CSW01_08380 PF00849 RNA pseudouridylate synthase CSW01_08385 PF00209 Sodium:neurotransmitter symporter family CSW01_08395 PF13091 PLD-like domain CSW01_08395 PF13396 Phospholipase_D-nuclease N-terminal CSW01_08400 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW01_08405 PF03352 Methyladenine glycosylase CSW01_08410 PF00873 AcrB/AcrD/AcrF family CSW01_08415 PF13533 Biotin-lipoyl like CSW01_08420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_08420 PF00529 HlyD membrane-fusion protein of T1SS CSW01_08435 PF04012 PspA/IM30 family CSW01_08440 PF00158 Sigma-54 interaction domain CSW01_08440 PF02954 Bacterial regulatory protein, Fis family CSW01_08445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_08450 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_08455 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_08455 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW01_08460 PF00005 ABC transporter CSW01_08460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_08465 PF00005 ABC transporter CSW01_08480 PF02833 DHHA2 domain CSW01_08480 PF01368 DHH family CSW01_08505 PF18364 Molybdopterin oxidoreductase N-terminal domain CSW01_08505 PF01568 Molydopterin dinucleotide binding domain CSW01_08505 PF00384 Molybdopterin oxidoreductase CSW01_08510 PF03264 NapC/NirT cytochrome c family, N-terminal region CSW01_08515 PF06796 Periplasmic nitrate reductase protein NapE CSW01_08525 PF01226 Formate/nitrite transporter CSW01_08540 PF01370 NAD dependent epimerase/dehydratase family CSW01_08545 PF02698 DUF218 domain CSW01_08555 PF04279 Intracellular septation protein A CSW01_08560 PF03061 Thioesterase superfamily CSW01_08565 PF03795 YCII-related domain CSW01_08575 PF08267 Cobalamin-independent synthase, N-terminal domain CSW01_08575 PF01717 Cobalamin-independent synthase, Catalytic domain CSW01_08580 PF03466 LysR substrate binding domain CSW01_08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_08595 PF05193 Peptidase M16 inactive domain CSW01_08595 PF00675 Insulinase (Peptidase family M16) CSW01_08600 PF00563 EAL domain CSW01_08600 PF00990 Diguanylate cyclase, GGDEF domain CSW01_08600 PF03707 Bacterial signalling protein N terminal repeat CSW01_08605 PF04055 Radical SAM superfamily CSW01_08605 PF11842 Domain of unknown function (DUF3362) CSW01_08605 PF08497 Radical SAM N-terminal CSW01_08610 PF01810 LysE type translocator CSW01_08615 PF01037 Lrp/AsnC ligand binding domain CSW01_08620 PF16330 MukB hinge domain CSW01_08620 PF04310 MukB N-terminal CSW01_08625 PF04288 MukE-like family CSW01_08630 PF03882 MukF winged-helix domain CSW01_08630 PF17192 MukF middle domain CSW01_08630 PF17193 MukF C-terminal domain CSW01_08640 PF02698 DUF218 domain CSW01_08645 PF00486 Transcriptional regulatory protein, C terminal CSW01_08645 PF00072 Response regulator receiver domain CSW01_08650 PF02613 Nitrate reductase delta subunit CSW01_08660 PF00356 Bacterial regulatory proteins, lacI family CSW01_08665 PF04993 TfoX N-terminal domain CSW01_08665 PF04994 TfoX C-terminal domain CSW01_08685 PF08323 Starch synthase catalytic domain CSW01_08685 PF00534 Glycosyl transferases group 1 CSW01_08690 PF00483 Nucleotidyl transferase CSW01_08695 PF08272 Topoisomerase I zinc-ribbon-like CSW01_08695 PF01131 DNA topoisomerase CSW01_08695 PF01751 Toprim domain CSW01_08695 PF01396 Topoisomerase DNA binding C4 zinc finger CSW01_08700 PF10692 Protein of unknown function (DUF2498) CSW01_08705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSW01_08715 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CSW01_08720 PF04376 Arginine-tRNA-protein transferase, N terminus CSW01_08720 PF04377 Arginine-tRNA-protein transferase, C terminus CSW01_08725 PF01176 Translation initiation factor 1A / IF-1 CSW01_08735 PF07055 Enoyl reductase FAD binding domain CSW01_08735 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CSW01_08735 PF12241 Trans-2-enoyl-CoA reductase catalytic region CSW01_08740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW01_08740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW01_08740 PF02770 Acyl-CoA dehydrogenase, middle domain CSW01_08740 PF09317 Domain of unknown function (DUF1974) CSW01_08745 PF00440 Bacterial regulatory proteins, tetR family CSW01_08745 PF16295 Tetracyclin repressor-like, C-terminal domain CSW01_08755 PF07383 Protein of unknown function (DUF1496) CSW01_08760 PF00171 Aldehyde dehydrogenase family CSW01_08765 PF00440 Bacterial regulatory proteins, tetR family CSW01_08765 PF08362 YcdC-like protein, C-terminal region CSW01_08790 PF05552 Conserved TM helix CSW01_08790 PF00924 Mechanosensitive ion channel CSW01_08795 PF04403 Paraquat-inducible protein A CSW01_08800 PF02470 MlaD protein CSW01_08810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_08815 PF00873 AcrB/AcrD/AcrF family CSW01_08825 PF00589 Phage integrase family CSW01_08825 PF13356 Arm DNA-binding domain CSW01_08830 PF00589 Phage integrase family CSW01_08830 PF13356 Arm DNA-binding domain CSW01_08835 PF00271 Helicase conserved C-terminal domain CSW01_08835 PF00176 SNF2 family N-terminal domain CSW01_08835 PF12419 SNF2 Helicase protein CSW01_08855 PF18766 SWI2/SNF2 ATPase CSW01_08855 PF11867 Domain of unknown function (DUF3387) CSW01_08855 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CSW01_08875 PF02384 N-6 DNA Methylase CSW01_08895 PF07646 Kelch motif CSW01_08900 PF01344 Kelch motif CSW01_08905 PF01418 Helix-turn-helix domain, rpiR family CSW01_08905 PF01380 SIS domain CSW01_08910 PF00701 Dihydrodipicolinate synthetase family CSW01_08915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CSW01_08920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CSW01_08925 PF03480 Bacterial extracellular solute-binding protein, family 7 CSW01_08935 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CSW01_08940 PF00480 ROK family CSW01_08945 PF01979 Amidohydrolase family CSW01_08950 PF13088 BNR repeat-like domain CSW01_08950 PF09264 Vibrio cholerae sialidase, lectin insertion CSW01_08960 PF04002 RadC-like JAB domain CSW01_09020 PF00005 ABC transporter CSW01_09100 PF00875 DNA photolyase CSW01_09100 PF03441 FAD binding domain of DNA photolyase CSW01_09110 PF09905 DNA-binding protein VF530 CSW01_09115 PF00158 Sigma-54 interaction domain CSW01_09115 PF01590 GAF domain CSW01_09115 PF02954 Bacterial regulatory protein, Fis family CSW01_09120 PF00171 Aldehyde dehydrogenase family CSW01_09140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW01_09150 PF12833 Helix-turn-helix domain CSW01_09155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW01_09155 PF02378 Phosphotransferase system, EIIC CSW01_09155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW01_09160 PF01238 Phosphomannose isomerase type I CSW01_09165 PF06610 L-alanine exporter CSW01_09170 PF09308 LuxQ, periplasmic CSW01_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_09170 PF00512 His Kinase A (phospho-acceptor) domain CSW01_09170 PF00072 Response regulator receiver domain CSW01_09180 PF02445 Quinolinate synthetase A protein CSW01_09190 PF00691 OmpA family CSW01_09195 PF07676 WD40-like Beta Propeller Repeat CSW01_09195 PF04052 TolB amino-terminal domain CSW01_09205 PF02472 Biopolymer transport protein ExbD/TolR CSW01_09210 PF01618 MotA/TolQ/ExbB proton channel family CSW01_09215 PF03061 Thioesterase superfamily CSW01_09220 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CSW01_09225 PF08173 Membrane bound YbgT-like protein CSW01_09230 PF02322 Cytochrome bd terminal oxidase subunit II CSW01_09235 PF01654 Cytochrome bd terminal oxidase subunit I CSW01_09240 PF17864 RuvB AAA lid domain CSW01_09240 PF05491 RuvB C-terminal winged helix domain CSW01_09240 PF05496 Holliday junction DNA helicase RuvB P-loop domain CSW01_09245 PF07499 RuvA, C-terminal domain CSW01_09245 PF01330 RuvA N terminal domain CSW01_09250 PF02075 Crossover junction endodeoxyribonuclease RuvC CSW01_09255 PF09190 DALR domain CSW01_09255 PF01406 tRNA synthetases class I (C) catalytic domain CSW01_09260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CSW01_09270 PF08668 HDOD domain CSW01_09270 PF00563 EAL domain CSW01_09275 PF02810 SEC-C motif CSW01_09280 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CSW01_09285 PF13609 Gram-negative porin CSW01_09290 PF13307 Helicase C-terminal domain CSW01_09290 PF06733 DEAD_2 CSW01_09295 PF01925 Sulfite exporter TauE/SafE CSW01_09300 PF07445 Primosomal replication protein priC CSW01_09305 PF10689 Protein of unknown function (DUF2496) CSW01_09310 PF00672 HAMP domain CSW01_09310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_09315 PF03372 Endonuclease/Exonuclease/phosphatase family CSW01_09320 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_09325 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_09330 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_09335 PF00005 ABC transporter CSW01_09350 PF01228 Glycine radical CSW01_09350 PF02901 Pyruvate formate lyase-like CSW01_09360 PF02743 Cache domain CSW01_09360 PF00672 HAMP domain CSW01_09360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_09365 PF04055 Radical SAM superfamily CSW01_09375 PF03887 YfbU domain CSW01_09380 PF08298 PrkA AAA domain CSW01_09380 PF06798 PrkA serine protein kinase C-terminal domain CSW01_09385 PF04285 Protein of unknown function (DUF444) CSW01_09390 PF04293 SpoVR like protein CSW01_09395 PF02348 Cytidylyltransferase CSW01_09400 PF03966 Trm112p-like protein CSW01_09405 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CSW01_09410 PF00005 ABC transporter CSW01_09410 PF00664 ABC transporter transmembrane region CSW01_09415 PF00753 Metallo-beta-lactamase superfamily CSW01_09415 PF13567 Domain of unknown function (DUF4131) CSW01_09415 PF03772 Competence protein CSW01_09425 PF12704 MacB-like periplasmic core domain CSW01_09425 PF02687 FtsX-like permease family CSW01_09430 PF00005 ABC transporter CSW01_09435 PF02687 FtsX-like permease family CSW01_09435 PF12704 MacB-like periplasmic core domain CSW01_09445 PF17757 UvrB interaction domain CSW01_09445 PF03461 TRCF domain CSW01_09445 PF00271 Helicase conserved C-terminal domain CSW01_09445 PF02559 CarD-like/TRCF domain CSW01_09445 PF00270 DEAD/DEAH box helicase CSW01_09455 PF16458 Beta-prism lectin CSW01_09455 PF07968 Leukocidin/Hemolysin toxin family CSW01_09455 PF12563 Hemolytic toxin N terminal CSW01_09465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_09470 PF05728 Uncharacterised protein family (UPF0227) CSW01_09480 PF13036 Peptidoglycan-synthase activator LpoB CSW01_09480 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CSW01_09495 PF01230 HIT domain CSW01_09500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_09500 PF00672 HAMP domain CSW01_09510 PF00392 Bacterial regulatory proteins, gntR family CSW01_09510 PF07840 FadR C-terminal domain CSW01_09515 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CSW01_09520 PF02600 Disulfide bond formation protein DsbB CSW01_09525 PF09397 Ftsk gamma domain CSW01_09525 PF17854 FtsK alpha domain CSW01_09525 PF01580 FtsK/SpoIIIE family CSW01_09525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CSW01_09530 PF01037 Lrp/AsnC ligand binding domain CSW01_09535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CSW01_09535 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CSW01_09545 PF03466 LysR substrate binding domain CSW01_09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_09555 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CSW01_09560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CSW01_09565 PF18073 Rubredoxin metal binding domain CSW01_09570 PF06305 Lipopolysaccharide assembly protein A domain CSW01_09575 PF00216 Bacterial DNA-binding protein CSW01_09580 PF00575 S1 RNA binding domain CSW01_09585 PF02224 Cytidylate kinase CSW01_09595 PF13145 PPIC-type PPIASE domain CSW01_09600 PF00216 Bacterial DNA-binding protein CSW01_09605 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_09605 PF02190 ATP-dependent protease La (LON) substrate-binding domain CSW01_09605 PF05362 Lon protease (S16) C-terminal proteolytic domain CSW01_09610 PF10431 C-terminal, D2-small domain, of ClpB protein CSW01_09610 PF06689 ClpX C4-type zinc finger CSW01_09610 PF07724 AAA domain (Cdc48 subfamily) CSW01_09615 PF00574 Clp protease CSW01_09620 PF05698 Bacterial trigger factor protein (TF) C-terminus CSW01_09620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW01_09620 PF05697 Bacterial trigger factor protein (TF) CSW01_09630 PF02743 Cache domain CSW01_09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_09630 PF00512 His Kinase A (phospho-acceptor) domain CSW01_09635 PF02954 Bacterial regulatory protein, Fis family CSW01_09635 PF00072 Response regulator receiver domain CSW01_09635 PF00158 Sigma-54 interaction domain CSW01_09640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CSW01_09645 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CSW01_09650 PF03480 Bacterial extracellular solute-binding protein, family 7 CSW01_09655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CSW01_09670 PF00563 EAL domain CSW01_09670 PF13188 PAS domain CSW01_09670 PF03707 Bacterial signalling protein N terminal repeat CSW01_09670 PF00990 Diguanylate cyclase, GGDEF domain CSW01_09720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CSW01_09720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CSW01_09725 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CSW01_09730 PF01494 FAD binding domain CSW01_09735 PF03466 LysR substrate binding domain CSW01_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_09750 PF01568 Molydopterin dinucleotide binding domain CSW01_09750 PF00384 Molybdopterin oxidoreductase CSW01_09750 PF18364 Molybdopterin oxidoreductase N-terminal domain CSW01_09755 PF03264 NapC/NirT cytochrome c family, N-terminal region CSW01_09760 PF00704 Glycosyl hydrolases family 18 CSW01_09765 PF07662 Na+ dependent nucleoside transporter C-terminus CSW01_09765 PF01773 Na+ dependent nucleoside transporter N-terminus CSW01_09765 PF07670 Nucleoside recognition CSW01_09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_09770 PF03466 LysR substrate binding domain CSW01_09775 PF13406 Transglycosylase SLT domain CSW01_09780 PF05166 YcgL domain CSW01_09785 PF05209 Septum formation inhibitor MinC, N-terminal domain CSW01_09785 PF03775 Septum formation inhibitor MinC, C-terminal domain CSW01_09790 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CSW01_09795 PF03776 Septum formation topological specificity factor MinE CSW01_09800 PF04170 NlpE N-terminal domain CSW01_09820 PF07690 Major Facilitator Superfamily CSW01_09825 PF00672 HAMP domain CSW01_09825 PF12729 Four helix bundle sensory module for signal transduction CSW01_09825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_09830 PF01381 Helix-turn-helix CSW01_09830 PF07883 Cupin domain CSW01_09835 PF03594 Benzoate membrane transport protein CSW01_09840 PF13193 AMP-binding enzyme C-terminal domain CSW01_09840 PF00501 AMP-binding enzyme CSW01_09845 PF13378 Enolase C-terminal domain-like CSW01_09850 PF00378 Enoyl-CoA hydratase/isomerase CSW01_09855 PF12697 Alpha/beta hydrolase family CSW01_09860 PF16582 Middle domain of thiamine pyrophosphate CSW01_09860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW01_09860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW01_09865 PF00425 chorismate binding enzyme CSW01_09870 PF00155 Aminotransferase class I and II CSW01_09880 PF13286 Phosphohydrolase-associated domain CSW01_09880 PF01966 HD domain CSW01_09900 PF01612 3'-5' exonuclease CSW01_09900 PF00570 HRDC domain CSW01_09905 PF00501 AMP-binding enzyme CSW01_09905 PF13193 AMP-binding enzyme C-terminal domain CSW01_09910 PF00561 alpha/beta hydrolase fold CSW01_09925 PF00814 Glycoprotease family CSW01_09930 PF04851 Type III restriction enzyme, res subunit CSW01_09930 PF13307 Helicase C-terminal domain CSW01_09940 PF00551 Formyl transferase CSW01_09940 PF01842 ACT domain CSW01_09945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSW01_09945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_09950 PF01343 Peptidase family S49 CSW01_09955 PF00710 Asparaginase, N-terminal CSW01_09955 PF17763 Glutaminase/Asparaginase C-terminal domain CSW01_09960 PF07023 Protein of unknown function (DUF1315) CSW01_09970 PF01641 SelR domain CSW01_09975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSW01_09975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSW01_09980 PF01263 Aldose 1-epimerase CSW01_10000 PF13847 Methyltransferase domain CSW01_10015 PF01584 CheW-like domain CSW01_10015 PF00072 Response regulator receiver domain CSW01_10020 PF00480 ROK family CSW01_10025 PF00224 Pyruvate kinase, barrel domain CSW01_10025 PF02887 Pyruvate kinase, alpha/beta domain CSW01_10030 PF01734 Patatin-like phospholipase CSW01_10045 PF00209 Sodium:neurotransmitter symporter family CSW01_10055 PF02378 Phosphotransferase system, EIIC CSW01_10055 PF00367 phosphotransferase system, EIIB CSW01_10060 PF01026 TatD related DNase CSW01_10065 PF09115 DNA polymerase III, delta subunit, C terminal CSW01_10070 PF02223 Thymidylate kinase CSW01_10075 PF02618 YceG-like family CSW01_10080 PF01063 Amino-transferase class IV CSW01_10085 PF02801 Beta-ketoacyl synthase, C-terminal domain CSW01_10085 PF00109 Beta-ketoacyl synthase, N-terminal domain CSW01_10090 PF00550 Phosphopantetheine attachment site CSW01_10100 PF00698 Acyl transferase domain CSW01_10105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CSW01_10105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CSW01_10110 PF02504 Fatty acid synthesis protein CSW01_10115 PF01783 Ribosomal L32p protein family CSW01_10120 PF02620 Large ribosomal RNA subunit accumulation protein YceD CSW01_10125 PF02545 Maf-like protein CSW01_10130 PF01479 S4 domain CSW01_10130 PF00849 RNA pseudouridylate synthase CSW01_10145 PF12111 Polyribonucleotide phosphorylase C terminal CSW01_10145 PF10150 Ribonuclease E/G family CSW01_10145 PF00575 S1 RNA binding domain CSW01_10150 PF00916 Sulfate permease family CSW01_10150 PF01740 STAS domain CSW01_10165 PF00465 Iron-containing alcohol dehydrogenase CSW01_10165 PF00171 Aldehyde dehydrogenase family CSW01_10170 PF01914 MarC family integral membrane protein CSW01_10175 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSW01_10175 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSW01_10180 PF03553 Na+/H+ antiporter family CSW01_10190 PF04245 37-kD nucleoid-associated bacterial protein CSW01_10195 PF07208 Protein of unknown function (DUF1414) CSW01_10200 PF11893 Domain of unknown function (DUF3413) CSW01_10200 PF00884 Sulfatase CSW01_10215 PF00850 Histone deacetylase domain CSW01_10220 PF01131 DNA topoisomerase CSW01_10220 PF01751 Toprim domain CSW01_10225 PF00462 Glutaredoxin CSW01_10230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSW01_10230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSW01_10245 PF04333 MlaA lipoprotein CSW01_10255 PF03918 Cytochrome C biogenesis protein CSW01_10260 PF08534 Redoxin CSW01_10265 PF01578 Cytochrome C assembly protein CSW01_10265 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CSW01_10270 PF03100 CcmE CSW01_10275 PF04995 Heme exporter protein D (CcmD) CSW01_10280 PF01578 Cytochrome C assembly protein CSW01_10285 PF03379 CcmB protein CSW01_10290 PF00005 ABC transporter CSW01_10300 PF01584 CheW-like domain CSW01_10310 PF13614 AAA domain CSW01_10315 PF01339 CheB methylesterase CSW01_10315 PF00072 Response regulator receiver domain CSW01_10320 PF01627 Hpt domain CSW01_10320 PF07194 P2 response regulator binding domain CSW01_10320 PF02895 Signal transducing histidine kinase, homodimeric domain CSW01_10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_10320 PF01584 CheW-like domain CSW01_10325 PF04344 Chemotaxis phosphatase, CheZ CSW01_10330 PF00072 Response regulator receiver domain CSW01_10335 PF04542 Sigma-70 region 2 CSW01_10335 PF04545 Sigma-70, region 4 CSW01_10335 PF04539 Sigma-70 region 3 CSW01_10340 PF10609 NUBPL iron-transfer P-loop NTPase CSW01_10345 PF00448 SRP54-type protein, GTPase domain CSW01_10350 PF00771 FHIPEP family CSW01_10355 PF00300 Histidine phosphatase superfamily (branch 1) CSW01_10360 PF05193 Peptidase M16 inactive domain CSW01_10360 PF00675 Insulinase (Peptidase family M16) CSW01_10370 PF03485 Arginyl tRNA synthetase N terminal domain CSW01_10370 PF00750 tRNA synthetases class I (R) CSW01_10370 PF05746 DALR anticodon binding domain CSW01_10385 PF07670 Nucleoside recognition CSW01_10385 PF02421 Ferrous iron transport protein B CSW01_10385 PF07664 Ferrous iron transport protein B C terminus CSW01_10390 PF04023 FeoA domain CSW01_10395 PF12833 Helix-turn-helix domain CSW01_10395 PF02311 AraC-like ligand binding domain CSW01_10400 PF01297 Zinc-uptake complex component A periplasmic CSW01_10405 PF00005 ABC transporter CSW01_10410 PF00950 ABC 3 transport family CSW01_10415 PF00549 CoA-ligase CSW01_10415 PF02629 CoA binding domain CSW01_10420 PF08442 ATP-grasp domain CSW01_10420 PF00549 CoA-ligase CSW01_10425 PF02817 e3 binding domain CSW01_10425 PF00364 Biotin-requiring enzyme CSW01_10425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSW01_10430 PF00676 Dehydrogenase E1 component CSW01_10430 PF02779 Transketolase, pyrimidine binding domain CSW01_10430 PF16870 2-oxoglutarate dehydrogenase C-terminal CSW01_10430 PF16078 2-oxoglutarate dehydrogenase N-terminus CSW01_10435 PF13085 2Fe-2S iron-sulfur cluster binding domain CSW01_10440 PF02910 Fumarate reductase flavoprotein C-term CSW01_10440 PF00890 FAD binding domain CSW01_10445 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CSW01_10450 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CSW01_10455 PF00285 Citrate synthase, C-terminal domain CSW01_10460 PF01784 NIF3 (NGG1p interacting factor 3) CSW01_10470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW01_10470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW01_10470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW01_10470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW01_10475 PF17206 SeqA protein N-terminal domain CSW01_10475 PF03925 SeqA protein C-terminal domain CSW01_10480 PF12697 Alpha/beta hydrolase family CSW01_10490 PF00258 Flavodoxin CSW01_10495 PF04172 LrgB-like family CSW01_10500 PF03788 LrgA family CSW01_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_10505 PF03466 LysR substrate binding domain CSW01_10515 PF01475 Ferric uptake regulator family CSW01_10520 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSW01_10520 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSW01_10525 PF11890 Domain of unknown function (DUF3410) CSW01_10525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW01_10525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW01_10530 PF02801 Beta-ketoacyl synthase, C-terminal domain CSW01_10530 PF00109 Beta-ketoacyl synthase, N-terminal domain CSW01_10535 PF01266 FAD dependent oxidoreductase CSW01_10535 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CSW01_10540 PF03358 NADPH-dependent FMN reductase CSW01_10545 PF08891 YfcL protein CSW01_10550 PF04315 Elongation factor P hydroxylase CSW01_10555 PF03458 UPF0126 domain CSW01_10560 PF01264 Chorismate synthase CSW01_10570 PF05175 Methyltransferase small domain CSW01_10575 PF01713 Smr domain CSW01_10580 PF01312 FlhB HrpN YscU SpaS Family CSW01_10585 PF01311 Bacterial export proteins, family 1 CSW01_10590 PF01313 Bacterial export proteins, family 3 CSW01_10595 PF00813 FliP family CSW01_10600 PF04347 Flagellar biosynthesis protein, FliO CSW01_10605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CSW01_10610 PF02154 Flagellar motor switch protein FliM CSW01_10610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CSW01_10615 PF03748 Flagellar basal body-associated protein FliL CSW01_10635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW01_10635 PF18269 T3SS EscN ATPase C-terminal domain CSW01_10640 PF02108 Flagellar assembly protein FliH CSW01_10645 PF14841 FliG middle domain CSW01_10645 PF14842 FliG N-terminal domain CSW01_10645 PF01706 FliG C-terminal domain CSW01_10650 PF08345 Flagellar M-ring protein C-terminal CSW01_10650 PF01514 Secretory protein of YscJ/FliF family CSW01_10655 PF02049 Flagellar hook-basal body complex protein FliE CSW01_10660 PF00158 Sigma-54 interaction domain CSW01_10660 PF02954 Bacterial regulatory protein, Fis family CSW01_10660 PF00072 Response regulator receiver domain CSW01_10665 PF08447 PAS fold CSW01_10665 PF00512 His Kinase A (phospho-acceptor) domain CSW01_10665 PF13426 PAS domain CSW01_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_10665 PF00989 PAS fold CSW01_10665 PF13493 Domain of unknown function (DUF4118) CSW01_10670 PF00072 Response regulator receiver domain CSW01_10670 PF02954 Bacterial regulatory protein, Fis family CSW01_10670 PF00158 Sigma-54 interaction domain CSW01_10675 PF02561 Flagellar protein FliS CSW01_10685 PF07195 Flagellar hook-associated protein 2 C-terminus CSW01_10685 PF07196 Flagellin hook IN motif CSW01_10685 PF02465 Flagellar hook-associated protein 2 N-terminus CSW01_10690 PF03646 FlaG protein CSW01_10695 PF00700 Bacterial flagellin C-terminal helical region CSW01_10695 PF07196 Flagellin hook IN motif CSW01_10695 PF00669 Bacterial flagellin N-terminal helical region CSW01_10700 PF00669 Bacterial flagellin N-terminal helical region CSW01_10700 PF00700 Bacterial flagellin C-terminal helical region CSW01_10700 PF07196 Flagellin hook IN motif CSW01_10705 PF07196 Flagellin hook IN motif CSW01_10705 PF00700 Bacterial flagellin C-terminal helical region CSW01_10705 PF00669 Bacterial flagellin N-terminal helical region CSW01_10710 PF04261 Dyp-type peroxidase family CSW01_10715 PF11143 Protein of unknown function (DUF2919) CSW01_10730 PF03960 ArsC family CSW01_10735 PF07687 Peptidase dimerisation domain CSW01_10735 PF01546 Peptidase family M20/M25/M40 CSW01_10740 PF02557 D-alanyl-D-alanine carboxypeptidase CSW01_10750 PF06804 NlpB/DapX lipoprotein CSW01_10755 PF00701 Dihydrodipicolinate synthetase family CSW01_10765 PF00578 AhpC/TSA family CSW01_10770 PF00672 HAMP domain CSW01_10770 PF02743 Cache domain CSW01_10770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_10775 PF01594 AI-2E family transporter CSW01_10785 PF01435 Peptidase family M48 CSW01_10785 PF13181 Tetratricopeptide repeat CSW01_10790 PF03960 ArsC family CSW01_10795 PF03358 NADPH-dependent FMN reductase CSW01_10810 PF00860 Permease family CSW01_10815 PF04073 Aminoacyl-tRNA editing domain CSW01_10820 PF00149 Calcineurin-like phosphoesterase CSW01_10820 PF02872 5'-nucleotidase, C-terminal domain CSW01_10825 PF00793 DAHP synthetase I family CSW01_10830 PF13369 Transglutaminase-like superfamily CSW01_10835 PF04247 Invasion gene expression up-regulator, SirB CSW01_10840 PF17827 PrmC N-terminal domain CSW01_10840 PF13847 Methyltransferase domain CSW01_10845 PF00472 RF-1 domain CSW01_10845 PF03462 PCRF domain CSW01_10850 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CSW01_10850 PF01488 Shikimate / quinate 5-dehydrogenase CSW01_10850 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CSW01_10855 PF03550 Outer membrane lipoprotein LolB CSW01_10860 PF00288 GHMP kinases N terminal domain CSW01_10860 PF08544 GHMP kinases C terminal CSW01_10865 PF14572 Phosphoribosyl synthetase-associated domain CSW01_10865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CSW01_10870 PF01195 Peptidyl-tRNA hydrolase CSW01_10875 PF01926 50S ribosome-binding GTPase CSW01_10875 PF06071 Protein of unknown function (DUF933) CSW01_10940 PF00669 Bacterial flagellin N-terminal helical region CSW01_10940 PF07196 Flagellin hook IN motif CSW01_10940 PF00700 Bacterial flagellin C-terminal helical region CSW01_11100 PF05840 Bacteriophage replication gene A protein (GPA) CSW01_11165 PF00589 Phage integrase family CSW01_11165 PF02899 Phage integrase, N-terminal SAM-like domain CSW01_11170 PF00700 Bacterial flagellin C-terminal helical region CSW01_11170 PF07196 Flagellin hook IN motif CSW01_11170 PF00669 Bacterial flagellin N-terminal helical region CSW01_11180 PF07196 Flagellin hook IN motif CSW01_11180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW01_11185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CSW01_11185 PF10135 Rod binding protein CSW01_11190 PF02119 Flagellar P-ring protein CSW01_11195 PF02107 Flagellar L-ring protein CSW01_11200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW01_11200 PF00460 Flagella basal body rod protein CSW01_11205 PF00460 Flagella basal body rod protein CSW01_11205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW01_11210 PF07559 Flagellar basal body protein FlaE CSW01_11210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW01_11210 PF00460 Flagella basal body rod protein CSW01_11215 PF13861 FlgD Tudor-like domain CSW01_11215 PF13860 FlgD Ig-like domain CSW01_11215 PF03963 Flagellar hook capping protein - N-terminal region CSW01_11220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW01_11220 PF00460 Flagella basal body rod protein CSW01_11225 PF00460 Flagella basal body rod protein CSW01_11230 PF03705 CheR methyltransferase, all-alpha domain CSW01_11230 PF01739 CheR methyltransferase, SAM binding domain CSW01_11235 PF01584 CheW-like domain CSW01_11235 PF00072 Response regulator receiver domain CSW01_11270 PF00550 Phosphopantetheine attachment site CSW01_11270 PF00501 AMP-binding enzyme CSW01_11270 PF00668 Condensation domain CSW01_11270 PF08242 Methyltransferase domain CSW01_11275 PF08021 Siderophore-interacting FAD-binding domain CSW01_11275 PF04954 Siderophore-interacting protein CSW01_11280 PF07715 TonB-dependent Receptor Plug Domain CSW01_11290 PF00691 OmpA family CSW01_11290 PF01389 OmpA-like transmembrane domain CSW01_11295 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSW01_11300 PF00403 Heavy-metal-associated domain CSW01_11310 PF02838 Glycosyl hydrolase family 20, domain 2 CSW01_11310 PF00728 Glycosyl hydrolase family 20, catalytic domain CSW01_11310 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CSW01_11310 PF03173 Putative carbohydrate binding domain CSW01_11315 PF01963 TraB family CSW01_11330 PF01713 Smr domain CSW01_11335 PF01479 S4 domain CSW01_11335 PF00849 RNA pseudouridylate synthase CSW01_11340 PF00990 Diguanylate cyclase, GGDEF domain CSW01_11340 PF08448 PAS fold CSW01_11350 PF00586 AIR synthase related protein, N-terminal domain CSW01_11350 PF02769 AIR synthase related protein, C-terminal domain CSW01_11355 PF00551 Formyl transferase CSW01_11360 PF13230 Glutamine amidotransferases class-II CSW01_11365 PF13580 SIS domain CSW01_11370 PF02770 Acyl-CoA dehydrogenase, middle domain CSW01_11370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW01_11370 PF09317 Domain of unknown function (DUF1974) CSW01_11370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW01_11380 PF00929 Exonuclease CSW01_11385 PF00075 RNase H CSW01_11390 PF08241 Methyltransferase domain CSW01_11395 PF00753 Metallo-beta-lactamase superfamily CSW01_11395 PF16123 Hydroxyacylglutathione hydrolase C-terminus CSW01_11400 PF01476 LysM domain CSW01_11400 PF01464 Transglycosylase SLT domain CSW01_11405 PF03372 Endonuclease/Exonuclease/phosphatase family CSW01_11410 PF00543 Nitrogen regulatory protein P-II CSW01_11415 PF05870 Phenolic acid decarboxylase (PAD) CSW01_11420 PF00034 Cytochrome c CSW01_11425 PF11734 TilS substrate C-terminal domain CSW01_11425 PF09179 TilS substrate binding domain CSW01_11425 PF01171 PP-loop family CSW01_11430 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CSW01_11435 PF02811 PHP domain CSW01_11435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CSW01_11435 PF01336 OB-fold nucleic acid binding domain CSW01_11435 PF07733 Bacterial DNA polymerase III alpha NTPase domain CSW01_11435 PF14579 Helix-hairpin-helix motif CSW01_11440 PF01351 Ribonuclease HII CSW01_11445 PF02684 Lipid-A-disaccharide synthetase CSW01_11450 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_11450 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CSW01_11455 PF07977 FabA-like domain CSW01_11460 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_11460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CSW01_11465 PF03938 Outer membrane protein (OmpH-like) CSW01_11470 PF01103 Surface antigen CSW01_11470 PF07244 Surface antigen variable number repeat CSW01_11475 PF17820 PDZ domain CSW01_11475 PF02163 Peptidase family M50 CSW01_11480 PF13288 DXP reductoisomerase C-terminal domain CSW01_11480 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CSW01_11480 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CSW01_11490 PF01255 Putative undecaprenyl diphosphate synthase CSW01_11495 PF01765 Ribosome recycling factor CSW01_11500 PF00696 Amino acid kinase family CSW01_11505 PF00889 Elongation factor TS CSW01_11510 PF00318 Ribosomal protein S2 CSW01_11515 PF00557 Metallopeptidase family M24 CSW01_11520 PF01909 Nucleotidyltransferase domain CSW01_11520 PF01966 HD domain CSW01_11520 PF08335 GlnD PII-uridylyltransferase CSW01_11525 PF11944 Protein of unknown function (DUF3461) CSW01_11530 PF04608 Phosphatidylglycerophosphatase A CSW01_11535 PF00586 AIR synthase related protein, N-terminal domain CSW01_11535 PF02769 AIR synthase related protein, C-terminal domain CSW01_11540 PF01029 NusB family CSW01_11545 PF00885 6,7-dimethyl-8-ribityllumazine synthase CSW01_11550 PF00925 GTP cyclohydrolase II CSW01_11550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CSW01_11555 PF00677 Lumazine binding domain CSW01_11560 PF01872 RibD C-terminal domain CSW01_11560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW01_11565 PF03477 ATP cone domain CSW01_11570 PF00171 Aldehyde dehydrogenase family CSW01_11575 PF01472 PUA domain CSW01_11575 PF00696 Amino acid kinase family CSW01_11580 PF07417 Sigma factor-binding transcriptional regulator Crl CSW01_11590 PF00156 Phosphoribosyl transferase domain CSW01_11595 PF00860 Permease family CSW01_11600 PF01546 Peptidase family M20/M25/M40 CSW01_11600 PF07687 Peptidase dimerisation domain CSW01_11605 PF18030 RimK PreATP-grasp domain CSW01_11605 PF08443 RimK-like ATP-grasp domain CSW01_11610 PF18030 RimK PreATP-grasp domain CSW01_11610 PF08443 RimK-like ATP-grasp domain CSW01_11620 PF00209 Sodium:neurotransmitter symporter family CSW01_11625 PF17158 Membrane-associated sensor, integral membrane domain CSW01_11625 PF00990 Diguanylate cyclase, GGDEF domain CSW01_11635 PF00817 impB/mucB/samB family CSW01_11635 PF11798 IMS family HHH motif CSW01_11645 PF02424 ApbE family CSW01_11650 PF00175 Oxidoreductase NAD-binding domain CSW01_11650 PF00970 Oxidoreductase FAD-binding domain CSW01_11650 PF00111 2Fe-2S iron-sulfur cluster binding domain CSW01_11655 PF02508 Rnf-Nqr subunit, membrane protein CSW01_11660 PF02508 Rnf-Nqr subunit, membrane protein CSW01_11665 PF04205 FMN-binding domain CSW01_11670 PF03116 NQR2, RnfD, RnfE family CSW01_11675 PF11973 NQRA C-terminal domain CSW01_11675 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CSW01_11680 PF01722 BolA-like protein CSW01_11685 PF05175 Methyltransferase small domain CSW01_11695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CSW01_11705 PF07690 Major Facilitator Superfamily CSW01_11715 PF04545 Sigma-70, region 4 CSW01_11715 PF04542 Sigma-70 region 2 CSW01_11725 PF03502 Nucleoside-specific channel-forming protein, Tsx CSW01_11730 PF02558 Ketopantoate reductase PanE/ApbA CSW01_11730 PF08546 Ketopantoate reductase PanE/ApbA C terminal CSW01_11735 PF01965 DJ-1/PfpI family CSW01_11740 PF00266 Aminotransferase class-V CSW01_11745 PF02657 Fe-S metabolism associated domain CSW01_11750 PF00899 ThiF family CSW01_11755 PF06725 3D domain CSW01_11755 PF03562 MltA specific insert domain CSW01_11765 PF00583 Acetyltransferase (GNAT) family CSW01_11765 PF00696 Amino acid kinase family CSW01_11775 PF13538 UvrD-like helicase C-terminal domain CSW01_11780 PF00580 UvrD/REP helicase N-terminal domain CSW01_11780 PF13361 UvrD-like helicase C-terminal domain CSW01_11780 PF12705 PD-(D/E)XK nuclease superfamily CSW01_11785 PF17946 RecC C-terminal domain CSW01_11800 PF07130 YebG protein CSW01_11805 PF14602 Hexapeptide repeat of succinyl-transferase CSW01_11805 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CSW01_11815 PF00583 Acetyltransferase (GNAT) family CSW01_11820 PF08443 RimK-like ATP-grasp domain CSW01_11820 PF02080 TrkA-C domain CSW01_11820 PF18030 RimK PreATP-grasp domain CSW01_11825 PF01544 CorA-like Mg2+ transporter protein CSW01_11835 PF01588 Putative tRNA binding domain CSW01_11840 PF00356 Bacterial regulatory proteins, lacI family CSW01_11845 PF02837 Glycosyl hydrolases family 2, sugar binding domain CSW01_11845 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CSW01_11845 PF00703 Glycosyl hydrolases family 2 CSW01_11845 PF16353 Domain of unknown function(DUF4981) CSW01_11845 PF02929 Beta galactosidase small chain CSW01_11855 PF00072 Response regulator receiver domain CSW01_11860 PF00501 AMP-binding enzyme CSW01_11865 PF00009 Elongation factor Tu GTP binding domain CSW01_11865 PF03144 Elongation factor Tu domain 2 CSW01_11865 PF03764 Elongation factor G, domain IV CSW01_11865 PF14492 Elongation Factor G, domain II CSW01_11865 PF00679 Elongation factor G C-terminus CSW01_11870 PF18073 Rubredoxin metal binding domain CSW01_11885 PF18429 Domain of unknown function (DUF5609) CSW01_11895 PF01048 Phosphorylase superfamily CSW01_11900 PF01676 Metalloenzyme superfamily CSW01_11905 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CSW01_11905 PF00591 Glycosyl transferase family, a/b domain CSW01_11905 PF02885 Glycosyl transferase family, helical bundle domain CSW01_11910 PF01791 DeoC/LacD family aldolase CSW01_11920 PF01773 Na+ dependent nucleoside transporter N-terminus CSW01_11920 PF07662 Na+ dependent nucleoside transporter C-terminus CSW01_11920 PF07670 Nucleoside recognition CSW01_11925 PF01026 TatD related DNase CSW01_11930 PF03883 Peroxide stress protein YaaA CSW01_11935 PF01235 Sodium:alanine symporter family CSW01_11950 PF03167 Uracil DNA glycosylase superfamily CSW01_11955 PF01261 Xylose isomerase-like TIM barrel CSW01_11960 PF01228 Glycine radical CSW01_11965 PF14821 Threonine synthase N terminus CSW01_11965 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_11970 PF00288 GHMP kinases N terminal domain CSW01_11970 PF08544 GHMP kinases C terminal CSW01_11975 PF13840 ACT domain CSW01_11975 PF03447 Homoserine dehydrogenase, NAD binding domain CSW01_11975 PF00742 Homoserine dehydrogenase CSW01_11975 PF00696 Amino acid kinase family CSW01_11975 PF01842 ACT domain CSW01_11990 PF03737 Aldolase/RraA CSW01_12000 PF00486 Transcriptional regulatory protein, C terminal CSW01_12000 PF00072 Response regulator receiver domain CSW01_12005 PF18415 Histidine kinase receptor ArcB trans-membrane domain CSW01_12005 PF00512 His Kinase A (phospho-acceptor) domain CSW01_12005 PF00989 PAS fold CSW01_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_12005 PF00072 Response regulator receiver domain CSW01_12005 PF01627 Hpt domain CSW01_12010 PF00563 EAL domain CSW01_12010 PF01590 GAF domain CSW01_12010 PF00990 Diguanylate cyclase, GGDEF domain CSW01_12010 PF00360 Phytochrome region CSW01_12015 PF16199 Radical_SAM C-terminal domain CSW01_12015 PF04055 Radical SAM superfamily CSW01_12020 PF01493 GXGXG motif CSW01_12020 PF01645 Conserved region in glutamate synthase CSW01_12020 PF00310 Glutamine amidotransferases class-II CSW01_12020 PF04898 Glutamate synthase central domain CSW01_12025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_12025 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CSW01_12030 PF01493 GXGXG motif CSW01_12030 PF01645 Conserved region in glutamate synthase CSW01_12030 PF04898 Glutamate synthase central domain CSW01_12030 PF00310 Glutamine amidotransferases class-II CSW01_12035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CSW01_12035 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_12045 PF01048 Phosphorylase superfamily CSW01_12055 PF01497 Periplasmic binding protein CSW01_12060 PF03458 UPF0126 domain CSW01_12065 PF03466 LysR substrate binding domain CSW01_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_12070 PF01925 Sulfite exporter TauE/SafE CSW01_12075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW01_12080 PF00005 ABC transporter CSW01_12100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW01_12100 PF02142 MGS-like domain CSW01_12100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CSW01_12105 PF00117 Glutamine amidotransferase class-I CSW01_12105 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CSW01_12115 PF05173 Dihydrodipicolinate reductase, C-terminus CSW01_12115 PF01113 Dihydrodipicolinate reductase, N-terminus CSW01_12120 PF00293 NUDIX domain CSW01_12125 PF01043 SecA preprotein cross-linking domain CSW01_12125 PF07516 SecA Wing and Scaffold domain CSW01_12125 PF02810 SEC-C motif CSW01_12125 PF07517 SecA DEAD-like domain CSW01_12135 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CSW01_12140 PF12327 FtsZ family, C-terminal domain CSW01_12140 PF00091 Tubulin/FtsZ family, GTPase domain CSW01_12145 PF02491 SHS2 domain inserted in FTSA CSW01_12150 PF03799 Cell division protein FtsQ CSW01_12150 PF08478 POTRA domain, FtsQ-type CSW01_12155 PF01225 Mur ligase family, catalytic domain CSW01_12155 PF02875 Mur ligase family, glutamate ligase domain CSW01_12155 PF08245 Mur ligase middle domain CSW01_12160 PF04101 Glycosyltransferase family 28 C-terminal domain CSW01_12160 PF03033 Glycosyltransferase family 28 N-terminal domain CSW01_12165 PF01098 Cell cycle protein CSW01_12170 PF02875 Mur ligase family, glutamate ligase domain CSW01_12170 PF08245 Mur ligase middle domain CSW01_12175 PF00953 Glycosyl transferase family 4 CSW01_12175 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CSW01_12180 PF01225 Mur ligase family, catalytic domain CSW01_12180 PF08245 Mur ligase middle domain CSW01_12180 PF02875 Mur ligase family, glutamate ligase domain CSW01_12185 PF08245 Mur ligase middle domain CSW01_12185 PF01225 Mur ligase family, catalytic domain CSW01_12185 PF02875 Mur ligase family, glutamate ligase domain CSW01_12190 PF00905 Penicillin binding protein transpeptidase domain CSW01_12190 PF03717 Penicillin-binding Protein dimerisation domain CSW01_12195 PF04999 Cell division protein FtsL CSW01_12200 PF01795 MraW methylase family CSW01_12210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_12210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW01_12215 PF02817 e3 binding domain CSW01_12215 PF00364 Biotin-requiring enzyme CSW01_12215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSW01_12220 PF17831 Pyruvate dehydrogenase E1 component middle domain CSW01_12220 PF00456 Transketolase, thiamine diphosphate binding domain CSW01_12225 PF07729 FCD domain CSW01_12225 PF00392 Bacterial regulatory proteins, gntR family CSW01_12235 PF02872 5'-nucleotidase, C-terminal domain CSW01_12235 PF00149 Calcineurin-like phosphoesterase CSW01_12240 PF01368 DHH family CSW01_12240 PF02272 DHHA1 domain CSW01_12240 PF17768 RecJ OB domain CSW01_12245 PF13098 Thioredoxin-like domain CSW01_12245 PF10411 Disulfide bond isomerase protein N-terminus CSW01_12250 PF00589 Phage integrase family CSW01_12250 PF02899 Phage integrase, N-terminal SAM-like domain CSW01_12255 PF00258 Flavodoxin CSW01_12260 PF01510 N-acetylmuramoyl-L-alanine amidase CSW01_12265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CSW01_12265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CSW01_12270 PF00114 Pilin (bacterial filament) CSW01_12270 PF07963 Prokaryotic N-terminal methylation motif CSW01_12275 PF00437 Type II/IV secretion system protein CSW01_12275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CSW01_12280 PF00482 Type II secretion system (T2SS), protein F CSW01_12285 PF06750 Bacterial Peptidase A24 N-terminal domain CSW01_12285 PF01478 Type IV leader peptidase family CSW01_12290 PF01121 Dephospho-CoA kinase CSW01_12295 PF07072 Cell division protein CSW01_12300 PF03884 DNA gyrase inhibitor YacG CSW01_12305 PF00521 DNA gyrase/topoisomerase IV, subunit A CSW01_12305 PF03989 DNA gyrase C-terminal domain, beta-propeller CSW01_12310 PF00986 DNA gyrase B subunit, carboxyl terminus CSW01_12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_12310 PF01751 Toprim domain CSW01_12310 PF00204 DNA gyrase B CSW01_12315 PF05728 Uncharacterised protein family (UPF0227) CSW01_12320 PF00149 Calcineurin-like phosphoesterase CSW01_12325 PF06853 Protein of unknown function (DUF1249) CSW01_12330 PF00293 NUDIX domain CSW01_12335 PF02321 Outer membrane efflux protein CSW01_12340 PF01467 Cytidylyltransferase-like CSW01_12340 PF00294 pfkB family carbohydrate kinase CSW01_12345 PF03710 Glutamate-ammonia ligase adenylyltransferase CSW01_12345 PF08335 GlnD PII-uridylyltransferase CSW01_12350 PF02743 Cache domain CSW01_12350 PF00672 HAMP domain CSW01_12350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_12355 PF01928 CYTH domain CSW01_12360 PF01865 Protein of unknown function DUF47 CSW01_12365 PF01384 Phosphate transporter family CSW01_12370 PF08239 Bacterial SH3 domain CSW01_12380 PF01471 Putative peptidoglycan binding domain CSW01_12380 PF13401 AAA domain CSW01_12385 PF01743 Poly A polymerase head domain CSW01_12385 PF01966 HD domain CSW01_12385 PF12627 Probable RNA and SrmB- binding site of polymerase A CSW01_12390 PF00113 Enolase, C-terminal TIM barrel domain CSW01_12390 PF03952 Enolase, N-terminal domain CSW01_12395 PF06418 CTP synthase N-terminus CSW01_12395 PF00117 Glutamine amidotransferase class-I CSW01_12400 PF03819 MazG nucleotide pyrophosphohydrolase domain CSW01_12405 PF02824 TGS domain CSW01_12405 PF04607 Region found in RelA / SpoT proteins CSW01_12405 PF13291 ACT domain CSW01_12410 PF01938 TRAM domain CSW01_12410 PF05958 tRNA (Uracil-5-)-methyltransferase CSW01_12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_12415 PF01627 Hpt domain CSW01_12415 PF00072 Response regulator receiver domain CSW01_12415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CSW01_12415 PF00672 HAMP domain CSW01_12415 PF00512 His Kinase A (phospho-acceptor) domain CSW01_12420 PF00563 EAL domain CSW01_12420 PF00990 Diguanylate cyclase, GGDEF domain CSW01_12435 PF01648 4'-phosphopantetheinyl transferase superfamily CSW01_12440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CSW01_12445 PF11967 Recombination protein O N terminal CSW01_12445 PF02565 Recombination protein O C terminal CSW01_12450 PF07650 KH domain CSW01_12450 PF01926 50S ribosome-binding GTPase CSW01_12455 PF14622 Ribonuclease-III-like CSW01_12455 PF00035 Double-stranded RNA binding motif CSW01_12460 PF10502 Signal peptidase, peptidase S26 CSW01_12465 PF03144 Elongation factor Tu domain 2 CSW01_12465 PF00009 Elongation factor Tu GTP binding domain CSW01_12465 PF06421 GTP-binding protein LepA C-terminus CSW01_12465 PF00679 Elongation factor G C-terminus CSW01_12475 PF03888 MucB/RseB N-terminal domain CSW01_12475 PF17188 MucB/RseB C-terminal domain CSW01_12480 PF03872 Anti sigma-E protein RseA, N-terminal domain CSW01_12480 PF03873 Anti sigma-E protein RseA, C-terminal domain CSW01_12485 PF08281 Sigma-70, region 4 CSW01_12485 PF04542 Sigma-70 region 2 CSW01_12495 PF00890 FAD binding domain CSW01_12495 PF02910 Fumarate reductase flavoprotein C-term CSW01_12505 PF03937 Flavinator of succinate dehydrogenase CSW01_12520 PF01494 FAD binding domain CSW01_12525 PF01494 FAD binding domain CSW01_12530 PF03695 Uncharacterised protein family (UPF0149) CSW01_12535 PF05164 Cell division protein ZapA CSW01_12545 PF01812 5-formyltetrahydrofolate cyclo-ligase family CSW01_12550 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CSW01_12555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW01_12555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW01_12555 PF01842 ACT domain CSW01_12560 PF10369 Small subunit of acetolactate synthase CSW01_12565 PF00205 Thiamine pyrophosphate enzyme, central domain CSW01_12565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW01_12565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW01_12570 PF00501 AMP-binding enzyme CSW01_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_12575 PF03466 LysR substrate binding domain CSW01_12585 PF01569 PAP2 superfamily CSW01_12595 PF08502 LeuA allosteric (dimerisation) domain CSW01_12595 PF00682 HMGL-like CSW01_12600 PF00180 Isocitrate/isopropylmalate dehydrogenase CSW01_12605 PF00330 Aconitase family (aconitate hydratase) CSW01_12610 PF00694 Aconitase C-terminal domain CSW01_12655 PF00072 Response regulator receiver domain CSW01_12670 PF03739 Lipopolysaccharide export system permease LptF/LptG CSW01_12675 PF03739 Lipopolysaccharide export system permease LptF/LptG CSW01_12680 PF02789 Cytosol aminopeptidase family, N-terminal domain CSW01_12680 PF00883 Cytosol aminopeptidase family, catalytic domain CSW01_12685 PF04364 DNA polymerase III chi subunit, HolC CSW01_12690 PF00133 tRNA synthetases class I (I, L, M and V) CSW01_12690 PF08264 Anticodon-binding domain of tRNA CSW01_12690 PF10458 Valyl tRNA synthetase tRNA binding arm CSW01_12695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW01_12695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW01_12700 PF00849 RNA pseudouridylate synthase CSW01_12705 PF00176 SNF2 family N-terminal domain CSW01_12705 PF12137 RNA polymerase recycling family C-terminal CSW01_12705 PF00271 Helicase conserved C-terminal domain CSW01_12705 PF18337 RapA N-terminal Tudor like domain CSW01_12705 PF18339 RapA N-terminal Tudor like domain 1 CSW01_12715 PF02562 PhoH-like protein CSW01_12715 PF13638 PIN domain CSW01_12720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSW01_12720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSW01_12725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSW01_12725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSW01_12730 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CSW01_12730 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CSW01_12735 PF01042 Endoribonuclease L-PSP CSW01_12740 PF01553 Acyltransferase CSW01_12745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSW01_12750 PF01722 BolA-like protein CSW01_12760 PF05494 MlaC protein CSW01_12765 PF02470 MlaD protein CSW01_12770 PF02405 Permease MlaE CSW01_12775 PF00005 ABC transporter CSW01_12785 PF01699 Sodium/calcium exchanger protein CSW01_12790 PF00571 CBS domain CSW01_12790 PF01380 SIS domain CSW01_12805 PF03968 OstA-like protein CSW01_12810 PF12399 Branched-chain amino acid ATP-binding cassette transporter CSW01_12810 PF00005 ABC transporter CSW01_12815 PF04552 Sigma-54, DNA binding domain CSW01_12815 PF00309 Sigma-54 factor, Activator interacting domain (AID) CSW01_12815 PF04963 Sigma-54 factor, core binding domain CSW01_12820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CSW01_12825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW01_12830 PF03668 P-loop ATPase protein family CSW01_12835 PF00381 PTS HPr component phosphorylation site CSW01_12840 PF01769 Divalent cation transporter CSW01_12840 PF03448 MgtE intracellular N domain CSW01_12840 PF00571 CBS domain CSW01_12845 PF01523 Putative modulator of DNA gyrase CSW01_12850 PF04751 Protein of unknown function (DUF615) CSW01_12855 PF00005 ABC transporter CSW01_12860 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_12870 PF02441 Flavoprotein CSW01_12875 PF01225 Mur ligase family, catalytic domain CSW01_12875 PF08245 Mur ligase middle domain CSW01_12875 PF02875 Mur ligase family, glutamate ligase domain CSW01_12885 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CSW01_12890 PF00719 Inorganic pyrophosphatase CSW01_12895 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CSW01_12900 PF04357 TamB, inner membrane protein subunit of TAM complex CSW01_12905 PF17243 POTRA domain TamA domain 1 CSW01_12905 PF01103 Surface antigen CSW01_12905 PF07244 Surface antigen variable number repeat CSW01_12910 PF01625 Peptide methionine sulfoxide reductase CSW01_12915 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CSW01_12920 PF10795 Protein of unknown function (DUF2607) CSW01_12930 PF00005 ABC transporter CSW01_12955 PF00009 Elongation factor Tu GTP binding domain CSW01_12960 PF01507 Phosphoadenosine phosphosulfate reductase family CSW01_12965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW01_12965 PF10414 Sirohaem synthase dimerisation region CSW01_12965 PF14824 Sirohaem biosynthesis protein central CSW01_12970 PF00149 Calcineurin-like phosphoesterase CSW01_12970 PF02872 5'-nucleotidase, C-terminal domain CSW01_12980 PF03880 DbpA RNA binding domain CSW01_12980 PF00271 Helicase conserved C-terminal domain CSW01_12980 PF00270 DEAD/DEAH box helicase CSW01_12985 PF13673 Acetyltransferase (GNAT) domain CSW01_12990 PF00892 EamA-like transporter family CSW01_12995 PF08525 Opacity-associated protein A N-terminal motif CSW01_12995 PF04225 Opacity-associated protein A LysM-like domain CSW01_13000 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CSW01_13000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW01_13010 PF01196 Ribosomal protein L17 CSW01_13015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CSW01_13015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CSW01_13015 PF01000 RNA polymerase Rpb3/RpoA insert domain CSW01_13020 PF00163 Ribosomal protein S4/S9 N-terminal domain CSW01_13020 PF01479 S4 domain CSW01_13025 PF00411 Ribosomal protein S11 CSW01_13030 PF00416 Ribosomal protein S13/S18 CSW01_13035 PF00444 Ribosomal protein L36 CSW01_13040 PF00344 SecY translocase CSW01_13045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CSW01_13050 PF00327 Ribosomal protein L30p/L7e CSW01_13055 PF03719 Ribosomal protein S5, C-terminal domain CSW01_13055 PF00333 Ribosomal protein S5, N-terminal domain CSW01_13060 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CSW01_13065 PF00347 Ribosomal protein L6 CSW01_13070 PF00410 Ribosomal protein S8 CSW01_13075 PF00253 Ribosomal protein S14p/S29e CSW01_13080 PF00281 Ribosomal protein L5 CSW01_13080 PF00673 ribosomal L5P family C-terminus CSW01_13085 PF00467 KOW motif CSW01_13085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CSW01_13090 PF00238 Ribosomal protein L14p/L23e CSW01_13095 PF00366 Ribosomal protein S17 CSW01_13100 PF00831 Ribosomal L29 protein CSW01_13105 PF00252 Ribosomal protein L16p/L10e CSW01_13110 PF00189 Ribosomal protein S3, C-terminal domain CSW01_13110 PF07650 KH domain CSW01_13115 PF00237 Ribosomal protein L22p/L17e CSW01_13120 PF00203 Ribosomal protein S19 CSW01_13125 PF00181 Ribosomal Proteins L2, RNA binding domain CSW01_13125 PF03947 Ribosomal Proteins L2, C-terminal domain CSW01_13130 PF00276 Ribosomal protein L23 CSW01_13135 PF00573 Ribosomal protein L4/L1 family CSW01_13140 PF00297 Ribosomal protein L3 CSW01_13145 PF00338 Ribosomal protein S10p/S20e CSW01_13150 PF00588 SpoU rRNA Methylase family CSW01_13150 PF08032 RNA 2'-O ribose methyltransferase substrate binding CSW01_13155 PF00773 RNB domain CSW01_13155 PF08206 Ribonuclease B OB domain CSW01_13155 PF08461 Ribonuclease R winged-helix domain CSW01_13155 PF17876 Cold shock domain CSW01_13155 PF00575 S1 RNA binding domain CSW01_13160 PF00884 Sulfatase CSW01_13160 PF11893 Domain of unknown function (DUF3413) CSW01_13165 PF08238 Sel1 repeat CSW01_13175 PF00709 Adenylosuccinate synthetase CSW01_13180 PF01112 Asparaginase CSW01_13185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW01_13195 PF00999 Sodium/hydrogen exchanger family CSW01_13195 PF02254 TrkA-N domain CSW01_13200 PF02525 Flavodoxin-like fold CSW01_13205 PF00005 ABC transporter CSW01_13205 PF12848 ABC transporter CSW01_13215 PF00561 alpha/beta hydrolase fold CSW01_13220 PF06794 Uncharacterised protein family (UPF0270) CSW01_13225 PF00485 Phosphoribulokinase / Uridine kinase family CSW01_13230 PF00027 Cyclic nucleotide-binding domain CSW01_13230 PF13545 Crp-like helix-turn-helix domain CSW01_13240 PF00171 Aldehyde dehydrogenase family CSW01_13245 PF04958 Arginine N-succinyltransferase beta subunit CSW01_13250 PF00202 Aminotransferase class-III CSW01_13255 PF00117 Glutamine amidotransferase class-I CSW01_13260 PF00919 Uncharacterized protein family UPF0004 CSW01_13260 PF18693 TRAM domain CSW01_13260 PF04055 Radical SAM superfamily CSW01_13275 PF00579 tRNA synthetases class I (W and Y) CSW01_13280 PF13419 Haloacid dehalogenase-like hydrolase CSW01_13285 PF00834 Ribulose-phosphate 3 epimerase family CSW01_13290 PF02086 D12 class N6 adenine-specific DNA methyltransferase CSW01_13300 PF01761 3-dehydroquinate synthase CSW01_13305 PF01202 Shikimate kinase CSW01_13310 PF11741 AMIN domain CSW01_13310 PF00263 Bacterial type II and III secretion system protein CSW01_13310 PF03958 Bacterial type II/III secretion system short domain CSW01_13310 PF07660 Secretin and TonB N terminus short domain CSW01_13335 PF00905 Penicillin binding protein transpeptidase domain CSW01_13335 PF00912 Transglycosylase CSW01_13335 PF17092 Penicillin-binding protein OB-like domain CSW01_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_13340 PF03466 LysR substrate binding domain CSW01_13345 PF08534 Redoxin CSW01_13345 PF00462 Glutaredoxin CSW01_13350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW01_13350 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_13360 PF14698 Argininosuccinate lyase C-terminal CSW01_13360 PF00206 Lyase CSW01_13370 PF00764 Arginosuccinate synthase CSW01_13375 PF00696 Amino acid kinase family CSW01_13380 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSW01_13380 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSW01_13385 PF01546 Peptidase family M20/M25/M40 CSW01_13385 PF07687 Peptidase dimerisation domain CSW01_13390 PF00311 Phosphoenolpyruvate carboxylase CSW01_13400 PF06426 Serine acetyltransferase, N-terminal CSW01_13400 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_13405 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CSW01_13405 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CSW01_13410 PF02556 Preprotein translocase subunit SecB CSW01_13415 PF00581 Rhodanese-like domain CSW01_13420 PF00152 tRNA synthetases class II (D, K and N) CSW01_13425 PF00890 FAD binding domain CSW01_13425 PF02910 Fumarate reductase flavoprotein C-term CSW01_13430 PF13183 4Fe-4S dicluster domain CSW01_13430 PF13085 2Fe-2S iron-sulfur cluster binding domain CSW01_13435 PF02300 Fumarate reductase subunit C CSW01_13440 PF02313 Fumarate reductase subunit D CSW01_13445 PF08207 Elongation factor P (EF-P) KOW-like domain CSW01_13445 PF09285 Elongation factor P, C-terminal CSW01_13445 PF01132 Elongation factor P (EF-P) OB domain CSW01_13450 PF04055 Radical SAM superfamily CSW01_13460 PF00118 TCP-1/cpn60 chaperonin family CSW01_13465 PF00166 Chaperonin 10 Kd subunit CSW01_13470 PF00455 DeoR C terminal sensor domain CSW01_13470 PF08220 DeoR-like helix-turn-helix domain CSW01_13490 PF00121 Triosephosphate isomerase CSW01_13500 PF03737 Aldolase/RraA CSW01_13505 PF01040 UbiA prenyltransferase family CSW01_13510 PF10431 C-terminal, D2-small domain, of ClpB protein CSW01_13510 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_13510 PF07724 AAA domain (Cdc48 subfamily) CSW01_13515 PF00227 Proteasome subunit CSW01_13520 PF05036 Sporulation related domain CSW01_13525 PF00356 Bacterial regulatory proteins, lacI family CSW01_13530 PF00270 DEAD/DEAH box helicase CSW01_13530 PF00271 Helicase conserved C-terminal domain CSW01_13530 PF17764 3′ DNA-binding domain (3′BD) CSW01_13530 PF18074 Primosomal protein N C-terminal domain CSW01_13530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CSW01_13535 PF01197 Ribosomal protein L31 CSW01_13540 PF00390 Malic enzyme, N-terminal domain CSW01_13540 PF03949 Malic enzyme, NAD binding domain CSW01_13545 PF01340 Met Apo-repressor, MetJ CSW01_13550 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW01_13555 PF00742 Homoserine dehydrogenase CSW01_13555 PF00696 Amino acid kinase family CSW01_13555 PF03447 Homoserine dehydrogenase, NAD binding domain CSW01_13560 PF02219 Methylenetetrahydrofolate reductase CSW01_13565 PF06005 Cell division protein ZapB CSW01_13570 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CSW01_13575 PF00365 Phosphofructokinase CSW01_13580 PF16916 Dimerisation domain of Zinc Transporter CSW01_13580 PF01545 Cation efflux family CSW01_13590 PF00486 Transcriptional regulatory protein, C terminal CSW01_13590 PF00072 Response regulator receiver domain CSW01_13595 PF00512 His Kinase A (phospho-acceptor) domain CSW01_13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_13595 PF00672 HAMP domain CSW01_13595 PF16527 Two-component sensor protein CpxA, periplasmic domain CSW01_13600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSW01_13600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSW01_13605 PF00588 SpoU rRNA Methylase family CSW01_13610 PF04186 FxsA cytoplasmic membrane protein CSW01_13615 PF00990 Diguanylate cyclase, GGDEF domain CSW01_13615 PF17158 Membrane-associated sensor, integral membrane domain CSW01_13620 PF00206 Lyase CSW01_13620 PF10415 Fumarase C C-terminus CSW01_13625 PF03605 Anaerobic c4-dicarboxylate membrane transporter CSW01_13635 PF02683 Cytochrome C biogenesis protein transmembrane region CSW01_13635 PF11412 Disulphide bond corrector protein DsbC CSW01_13640 PF00196 Bacterial regulatory proteins, luxR family CSW01_13640 PF00072 Response regulator receiver domain CSW01_13645 PF02080 TrkA-C domain CSW01_13645 PF00999 Sodium/hydrogen exchanger family CSW01_13645 PF03471 Transporter associated domain CSW01_13655 PF00474 Sodium:solute symporter family CSW01_13660 PF02592 Putative vitamin uptake transporter CSW01_13665 PF00625 Guanylate kinase CSW01_13670 PF01192 RNA polymerase Rpb6 CSW01_13675 PF13291 ACT domain CSW01_13675 PF02824 TGS domain CSW01_13675 PF04607 Region found in RelA / SpoT proteins CSW01_13680 PF00270 DEAD/DEAH box helicase CSW01_13680 PF00271 Helicase conserved C-terminal domain CSW01_13680 PF17191 RecG wedge domain CSW01_13685 PF00860 Permease family CSW01_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_13690 PF00672 HAMP domain CSW01_13690 PF00512 His Kinase A (phospho-acceptor) domain CSW01_13695 PF00072 Response regulator receiver domain CSW01_13695 PF00486 Transcriptional regulatory protein, C terminal CSW01_13700 PF01272 Transcription elongation factor, GreA/GreB, C-term CSW01_13700 PF03449 Transcription elongation factor, N-terminal CSW01_13705 PF16921 Tex protein YqgF-like domain CSW01_13705 PF09371 Tex-like protein N-terminal domain CSW01_13705 PF00575 S1 RNA binding domain CSW01_13705 PF17674 HHH domain CSW01_13715 PF00561 alpha/beta hydrolase fold CSW01_13720 PF00156 Phosphoribosyl transferase domain CSW01_13725 PF01521 Iron-sulphur cluster biosynthesis CSW01_13725 PF01106 NifU-like domain CSW01_13730 PF00293 NUDIX domain CSW01_13735 PF00459 Inositol monophosphatase family CSW01_13740 PF01203 Type II secretion system (T2SS), protein N CSW01_13745 PF04612 Type II secretion system (T2SS), protein M CSW01_13750 PF12693 GspL periplasmic domain CSW01_13750 PF05134 Type II secretion system (T2SS), protein L CSW01_13755 PF03934 Type II secretion system (T2SS), protein K CSW01_13760 PF07963 Prokaryotic N-terminal methylation motif CSW01_13760 PF11612 Type II secretion system (T2SS), protein J CSW01_13765 PF07963 Prokaryotic N-terminal methylation motif CSW01_13765 PF02501 Type II secretion system (T2SS), protein I CSW01_13770 PF12019 Type II transport protein GspH CSW01_13775 PF08334 Type II secretion system (T2SS), protein G CSW01_13775 PF07963 Prokaryotic N-terminal methylation motif CSW01_13780 PF00482 Type II secretion system (T2SS), protein F CSW01_13785 PF00437 Type II/IV secretion system protein CSW01_13790 PF00263 Bacterial type II and III secretion system protein CSW01_13790 PF03958 Bacterial type II/III secretion system short domain CSW01_13795 PF11356 Type II secretion system protein C CSW01_13800 PF01479 S4 domain CSW01_13805 PF01430 Hsp33 protein CSW01_13810 PF01293 Phosphoenolpyruvate carboxykinase CSW01_13820 PF00583 Acetyltransferase (GNAT) family CSW01_13820 PF09500 Putative thioesterase (yiiD_Cterm) CSW01_13825 PF02580 D-Tyr-tRNA(Tyr) deacylase CSW01_13830 PF03631 Virulence factor BrkB CSW01_13835 PF03668 P-loop ATPase protein family CSW01_13850 PF00120 Glutamine synthetase, catalytic domain CSW01_13850 PF03951 Glutamine synthetase, beta-Grasp domain CSW01_13860 PF00512 His Kinase A (phospho-acceptor) domain CSW01_13860 PF00989 PAS fold CSW01_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_13865 PF00072 Response regulator receiver domain CSW01_13865 PF00158 Sigma-54 interaction domain CSW01_13865 PF02954 Bacterial regulatory protein, Fis family CSW01_13870 PF03707 Bacterial signalling protein N terminal repeat CSW01_13870 PF13188 PAS domain CSW01_13870 PF00990 Diguanylate cyclase, GGDEF domain CSW01_13870 PF00563 EAL domain CSW01_13875 PF00962 Adenosine/AMP deaminase CSW01_13955 PF12724 Flavodoxin domain CSW01_13960 PF02386 Cation transport protein CSW01_13965 PF09186 Domain of unknown function (DUF1949) CSW01_13965 PF01205 Uncharacterized protein family UPF0029 CSW01_13970 PF00378 Enoyl-CoA hydratase/isomerase CSW01_13970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSW01_13970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSW01_13975 PF00108 Thiolase, N-terminal domain CSW01_13975 PF02803 Thiolase, C-terminal domain CSW01_13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_13980 PF03466 LysR substrate binding domain CSW01_13985 PF07690 Major Facilitator Superfamily CSW01_13990 PF12804 MobA-like NTP transferase domain CSW01_13990 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_13995 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CSW01_13995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CSW01_14000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW01_14000 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSW01_14005 PF00231 ATP synthase CSW01_14010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW01_14010 PF00306 ATP synthase alpha/beta chain, C terminal domain CSW01_14010 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSW01_14015 PF00213 ATP synthase delta (OSCP) subunit CSW01_14020 PF00430 ATP synthase B/B' CF(0) CSW01_14025 PF00137 ATP synthase subunit C CSW01_14030 PF00119 ATP synthase A chain CSW01_14035 PF03899 ATP synthase I chain CSW01_14040 PF17762 HTH domain found in ParB protein CSW01_14040 PF02195 ParB-like nuclease domain CSW01_14045 PF13614 AAA domain CSW01_14050 PF02527 rRNA small subunit methyltransferase G CSW01_14055 PF01134 Glucose inhibited division protein A CSW01_14055 PF13932 GidA associated domain CSW01_14085 PF01709 Transcriptional regulator CSW01_14090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSW01_14090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CSW01_14095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_14095 PF00672 HAMP domain CSW01_14095 PF17200 Single Cache domain 2 CSW01_14105 PF10928 Protein of unknown function (DUF2810) CSW01_14110 PF00196 Bacterial regulatory proteins, luxR family CSW01_14110 PF17874 MalT-like TPR region CSW01_14115 PF00343 Carbohydrate phosphorylase CSW01_14120 PF02446 4-alpha-glucanotransferase CSW01_14125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSW01_14125 PF02806 Alpha amylase, C-terminal all-beta domain CSW01_14125 PF00128 Alpha amylase, catalytic domain CSW01_14135 PF05638 Type VI secretion system effector, Hcp CSW01_14140 PF16671 Actin cross-linking domain CSW01_14140 PF04717 Type VI secretion system, phage-baseplate injector CSW01_14165 PF01757 Acyltransferase family CSW01_14165 PF00842 Alanine racemase, C-terminal domain CSW01_14165 PF01168 Alanine racemase, N-terminal domain CSW01_14175 PF00939 Sodium:sulfate symporter transmembrane region CSW01_14180 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CSW01_14185 PF00704 Glycosyl hydrolases family 18 CSW01_14185 PF08329 Chitinase A, N-terminal domain CSW01_14205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_14205 PF00672 HAMP domain CSW01_14205 PF02743 Cache domain CSW01_14225 PF01569 PAP2 superfamily CSW01_14230 PF00375 Sodium:dicarboxylate symporter family CSW01_14240 PF02630 SCO1/SenC CSW01_14255 PF03616 Sodium/glutamate symporter CSW01_14260 PF12945 Flagellar protein YcgR CSW01_14260 PF07238 PilZ domain CSW01_14275 PF00529 HlyD membrane-fusion protein of T1SS CSW01_14275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CSW01_14280 PF11742 Protein of unknown function (DUF3302) CSW01_14285 PF00990 Diguanylate cyclase, GGDEF domain CSW01_14300 PF01048 Phosphorylase superfamily CSW01_14310 PF08349 Protein of unknown function (DUF1722) CSW01_14315 PF13411 MerR HTH family regulatory protein CSW01_14320 PF00875 DNA photolyase CSW01_14320 PF03441 FAD binding domain of DNA photolyase CSW01_14325 PF03734 L,D-transpeptidase catalytic domain CSW01_14325 PF17969 L,D-transpeptidase C-terminal domain CSW01_14325 PF01476 LysM domain CSW01_14335 PF00270 DEAD/DEAH box helicase CSW01_14335 PF00271 Helicase conserved C-terminal domain CSW01_14340 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CSW01_14340 PF00326 Prolyl oligopeptidase family CSW01_14345 PF07715 TonB-dependent Receptor Plug Domain CSW01_14345 PF00593 TonB dependent receptor CSW01_14365 PF00672 HAMP domain CSW01_14365 PF12729 Four helix bundle sensory module for signal transduction CSW01_14365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_14370 PF12849 PBP superfamily domain CSW01_14375 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_14380 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_14385 PF00005 ABC transporter CSW01_14390 PF03707 Bacterial signalling protein N terminal repeat CSW01_14390 PF00990 Diguanylate cyclase, GGDEF domain CSW01_14390 PF00563 EAL domain CSW01_14410 PF01740 STAS domain CSW01_14410 PF00916 Sulfate permease family CSW01_14420 PF01551 Peptidase family M23 CSW01_14420 PF08525 Opacity-associated protein A N-terminal motif CSW01_14420 PF01476 LysM domain CSW01_14425 PF03707 Bacterial signalling protein N terminal repeat CSW01_14425 PF13188 PAS domain CSW01_14425 PF00990 Diguanylate cyclase, GGDEF domain CSW01_14425 PF00563 EAL domain CSW01_14430 PF03466 LysR substrate binding domain CSW01_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_14435 PF07690 Major Facilitator Superfamily CSW01_14440 PF00376 MerR family regulatory protein CSW01_14440 PF09278 MerR, DNA binding CSW01_14470 PF02001 Protein of unknown function DUF134 CSW01_14490 PF01483 Proprotein convertase P-domain CSW01_14490 PF01447 Thermolysin metallopeptidase, catalytic domain CSW01_14490 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW01_14490 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW01_14505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CSW01_14505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CSW01_14510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSW01_14510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSW01_14515 PF00581 Rhodanese-like domain CSW01_14520 PF00563 EAL domain CSW01_14520 PF00196 Bacterial regulatory proteins, luxR family CSW01_14525 PF13419 Haloacid dehalogenase-like hydrolase CSW01_14530 PF01740 STAS domain CSW01_14530 PF00916 Sulfate permease family CSW01_14535 PF00849 RNA pseudouridylate synthase CSW01_14595 PF10431 C-terminal, D2-small domain, of ClpB protein CSW01_14595 PF17871 AAA lid domain CSW01_14595 PF07724 AAA domain (Cdc48 subfamily) CSW01_14595 PF00004 ATPase family associated with various cellular activities (AAA) CSW01_14630 PF04717 Type VI secretion system, phage-baseplate injector CSW01_14630 PF16671 Actin cross-linking domain CSW01_14645 PF05025 RbsD / FucU transport protein family CSW01_14650 PF00005 ABC transporter CSW01_14655 PF02653 Branched-chain amino acid transport system / permease component CSW01_14660 PF13407 Periplasmic binding protein domain CSW01_14665 PF00294 pfkB family carbohydrate kinase CSW01_14670 PF00356 Bacterial regulatory proteins, lacI family CSW01_14675 PF04973 Nicotinamide mononucleotide transporter CSW01_14680 PF04973 Nicotinamide mononucleotide transporter CSW01_14685 PF01048 Phosphorylase superfamily CSW01_14695 PF03009 Glycerophosphoryl diester phosphodiesterase family CSW01_14700 PF07690 Major Facilitator Superfamily CSW01_14715 PF02743 Cache domain CSW01_14715 PF00512 His Kinase A (phospho-acceptor) domain CSW01_14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_14720 PF00072 Response regulator receiver domain CSW01_14720 PF02954 Bacterial regulatory protein, Fis family CSW01_14720 PF00158 Sigma-54 interaction domain CSW01_14740 PF01266 FAD dependent oxidoreductase CSW01_14745 PF12561 ToxR activated gene A lipoprotein domain CSW01_14745 PF00041 Fibronectin type III domain CSW01_14750 PF01327 Polypeptide deformylase CSW01_14760 PF03334 Na+/H+ antiporter subunit CSW01_14765 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CSW01_14785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CSW01_14785 PF13244 Domain of unknown function (DUF4040) CSW01_14785 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CSW01_14785 PF00361 Proton-conducting membrane transporter CSW01_14795 PF00582 Universal stress protein family CSW01_14800 PF03222 Tryptophan/tyrosine permease family CSW01_14805 PF01212 Beta-eliminating lyase CSW01_14815 PF12843 Putative quorum-sensing-regulated virulence factor CSW01_14825 PF00990 Diguanylate cyclase, GGDEF domain CSW01_14825 PF08448 PAS fold CSW01_14825 PF00563 EAL domain CSW01_14830 PF00313 'Cold-shock' DNA-binding domain CSW01_14845 PF13519 von Willebrand factor type A domain CSW01_14845 PF07584 Aerotolerance regulator N-terminal CSW01_14860 PF01882 Protein of unknown function DUF58 CSW01_14865 PF07726 ATPase family associated with various cellular activities (AAA) CSW01_14865 PF17863 AAA lid domain CSW01_14870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_14870 PF02743 Cache domain CSW01_14870 PF00672 HAMP domain CSW01_14885 PF01773 Na+ dependent nucleoside transporter N-terminus CSW01_14885 PF07670 Nucleoside recognition CSW01_14885 PF07662 Na+ dependent nucleoside transporter C-terminus CSW01_14890 PF01546 Peptidase family M20/M25/M40 CSW01_14890 PF07687 Peptidase dimerisation domain CSW01_14900 PF00158 Sigma-54 interaction domain CSW01_14900 PF01590 GAF domain CSW01_14905 PF00175 Oxidoreductase NAD-binding domain CSW01_14905 PF00970 Oxidoreductase FAD-binding domain CSW01_14905 PF00042 Globin CSW01_14910 PF00313 'Cold-shock' DNA-binding domain CSW01_14915 PF03889 Alternative ribosome-rescue factor A CSW01_14930 PF00072 Response regulator receiver domain CSW01_14940 PF01256 Carbohydrate kinase CSW01_14940 PF03853 YjeF-related protein N-terminus CSW01_14945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW01_14945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW01_14955 PF07885 Ion channel CSW01_14970 PF00478 IMP dehydrogenase / GMP reductase domain CSW01_14975 PF00145 C-5 cytosine-specific DNA methylase CSW01_14995 PF01797 Transposase IS200 like CSW01_15010 PF00271 Helicase conserved C-terminal domain CSW01_15010 PF00270 DEAD/DEAH box helicase CSW01_15015 PF03605 Anaerobic c4-dicarboxylate membrane transporter CSW01_15020 PF02540 NAD synthase CSW01_15025 PF01467 Cytidylyltransferase-like CSW01_15035 PF11849 Domain of unknown function (DUF3369) CSW01_15040 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_15040 PF00512 His Kinase A (phospho-acceptor) domain CSW01_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_15050 PF03553 Na+/H+ antiporter family CSW01_15055 PF07690 Major Facilitator Superfamily CSW01_15065 PF08448 PAS fold CSW01_15065 PF00990 Diguanylate cyclase, GGDEF domain CSW01_15070 PF00657 GDSL-like Lipase/Acylhydrolase CSW01_15075 PF16458 Beta-prism lectin CSW01_15075 PF12563 Hemolytic toxin N terminal CSW01_15075 PF07968 Leukocidin/Hemolysin toxin family CSW01_15080 PF12729 Four helix bundle sensory module for signal transduction CSW01_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_15080 PF00672 HAMP domain CSW01_15085 PF00561 alpha/beta hydrolase fold CSW01_15090 PF03280 Proteobacterial lipase chaperone protein CSW01_15095 PF00801 PKD domain CSW01_15095 PF05547 Immune inhibitor A peptidase M6 CSW01_15115 PF01032 FecCD transport family CSW01_15120 PF01032 FecCD transport family CSW01_15125 PF00005 ABC transporter CSW01_15130 PF12833 Helix-turn-helix domain CSW01_15135 PF07715 TonB-dependent Receptor Plug Domain CSW01_15135 PF00593 TonB dependent receptor CSW01_15145 PF00871 Acetokinase family CSW01_15160 PF00672 HAMP domain CSW01_15160 PF00512 His Kinase A (phospho-acceptor) domain CSW01_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_15165 PF00486 Transcriptional regulatory protein, C terminal CSW01_15165 PF00072 Response regulator receiver domain CSW01_15175 PF01261 Xylose isomerase-like TIM barrel CSW01_15180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CSW01_15190 PF00596 Class II Aldolase and Adducin N-terminal domain CSW01_15195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW01_15200 PF03611 PTS system sugar-specific permease component CSW01_15205 PF00455 DeoR C terminal sensor domain CSW01_15205 PF08220 DeoR-like helix-turn-helix domain CSW01_15215 PF01292 Prokaryotic cytochrome b561 CSW01_15220 PF00128 Alpha amylase, catalytic domain CSW01_15225 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_15240 PF00486 Transcriptional regulatory protein, C terminal CSW01_15240 PF00072 Response regulator receiver domain CSW01_15245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_15245 PF14827 Double sensory domain of two-component sensor kinase CSW01_15245 PF00672 HAMP domain CSW01_15245 PF00512 His Kinase A (phospho-acceptor) domain CSW01_15245 PF13426 PAS domain CSW01_15285 PF07690 Major Facilitator Superfamily CSW01_15290 PF00672 HAMP domain CSW01_15290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_15290 PF02743 Cache domain CSW01_15300 PF00768 D-alanyl-D-alanine carboxypeptidase CSW01_15300 PF07943 Penicillin-binding protein 5, C-terminal domain CSW01_15315 PF00194 Eukaryotic-type carbonic anhydrase CSW01_15320 PF01797 Transposase IS200 like CSW01_15330 PF02347 Glycine cleavage system P-protein CSW01_15335 PF01597 Glycine cleavage H-protein CSW01_15340 PF00464 Serine hydroxymethyltransferase CSW01_15350 PF01571 Aminomethyltransferase folate-binding domain CSW01_15350 PF08669 Glycine cleavage T-protein C-terminal barrel domain CSW01_15360 PF05598 Transposase domain (DUF772) CSW01_15360 PF01609 Transposase DDE domain CSW01_15385 PF03129 Anticodon binding domain CSW01_15385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW01_15385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW01_15385 PF02824 TGS domain CSW01_15390 PF05198 Translation initiation factor IF-3, N-terminal domain CSW01_15390 PF00707 Translation initiation factor IF-3, C-terminal domain CSW01_15395 PF01632 Ribosomal protein L35 CSW01_15400 PF00453 Ribosomal protein L20 CSW01_15405 PF13495 Phage integrase, N-terminal SAM-like domain CSW01_15405 PF00589 Phage integrase family CSW01_15460 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_15510 PF13286 Phosphohydrolase-associated domain CSW01_15510 PF01966 HD domain CSW01_15535 PF00293 NUDIX domain CSW01_15555 PF13302 Acetyltransferase (GNAT) domain CSW01_15560 PF08212 Lipocalin-like domain CSW01_15605 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CSW01_15625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_15720 PF17676 LD-carboxypeptidase C-terminal domain CSW01_15720 PF02016 LD-carboxypeptidase N-terminal domain CSW01_15745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_15790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_15805 PF08212 Lipocalin-like domain CSW01_15825 PF04229 GrpB protein CSW01_15835 PF01810 LysE type translocator CSW01_15875 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CSW01_16040 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CSW01_16045 PF01381 Helix-turn-helix CSW01_16070 PF02567 Phenazine biosynthesis-like protein CSW01_16110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_16155 PF08212 Lipocalin-like domain CSW01_16220 PF13302 Acetyltransferase (GNAT) domain CSW01_16250 PF02567 Phenazine biosynthesis-like protein CSW01_16365 PF17676 LD-carboxypeptidase C-terminal domain CSW01_16365 PF02016 LD-carboxypeptidase N-terminal domain CSW01_16390 PF08212 Lipocalin-like domain CSW01_16395 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CSW01_16410 PF01555 DNA methylase CSW01_16455 PF01965 DJ-1/PfpI family CSW01_16455 PF12833 Helix-turn-helix domain CSW01_16510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_16560 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CSW01_16565 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CSW01_16580 PF01609 Transposase DDE domain CSW01_16580 PF05598 Transposase domain (DUF772) CSW01_16585 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_16605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_16615 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CSW01_16695 PF07859 alpha/beta hydrolase fold CSW01_16715 PF01797 Transposase IS200 like CSW01_16780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_16800 PF13597 Anaerobic ribonucleoside-triphosphate reductase CSW01_16800 PF03477 ATP cone domain CSW01_16810 PF00155 Aminotransferase class I and II CSW01_16815 PF18030 RimK PreATP-grasp domain CSW01_16815 PF08443 RimK-like ATP-grasp domain CSW01_16820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW01_16820 PF02378 Phosphotransferase system, EIIC CSW01_16825 PF00294 pfkB family carbohydrate kinase CSW01_16830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW01_16830 PF00381 PTS HPr component phosphorylation site CSW01_16835 PF00356 Bacterial regulatory proteins, lacI family CSW01_16835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW01_16840 PF00149 Calcineurin-like phosphoesterase CSW01_16840 PF12320 Type 5 capsule protein repressor C-terminal domain CSW01_16845 PF13476 AAA domain CSW01_16850 PF00072 Response regulator receiver domain CSW01_16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_16855 PF00155 Aminotransferase class I and II CSW01_16865 PF00654 Voltage gated chloride channel CSW01_16870 PF07683 Cobalamin synthesis protein cobW C-terminal domain CSW01_16870 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSW01_16875 PF01926 50S ribosome-binding GTPase CSW01_16880 PF02705 K+ potassium transporter CSW01_16885 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CSW01_16885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW01_16885 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CSW01_16885 PF10371 Domain of unknown function CSW01_16885 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CSW01_16890 PF00512 His Kinase A (phospho-acceptor) domain CSW01_16890 PF02702 Osmosensitive K+ channel His kinase sensor domain CSW01_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_16890 PF13493 Domain of unknown function (DUF4118) CSW01_16895 PF00072 Response regulator receiver domain CSW01_16895 PF00486 Transcriptional regulatory protein, C terminal CSW01_16900 PF02416 mttA/Hcf106 family CSW01_16905 PF09335 SNARE associated Golgi protein CSW01_16915 PF00563 EAL domain CSW01_16915 PF10388 EAL-domain associated signalling protein domain CSW01_16925 PF01292 Prokaryotic cytochrome b561 CSW01_16930 PF04264 YceI-like domain CSW01_16935 PF01226 Formate/nitrite transporter CSW01_16940 PF03466 LysR substrate binding domain CSW01_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_16945 PF06496 Protein of unknown function (DUF1097) CSW01_16950 PF11398 Protein of unknown function (DUF2813) CSW01_16955 PF02872 5'-nucleotidase, C-terminal domain CSW01_16955 PF00149 Calcineurin-like phosphoesterase CSW01_16960 PF03741 Integral membrane protein TerC family CSW01_16970 PF03831 PhnA domain CSW01_16970 PF08274 PhnA Zinc-Ribbon CSW01_17005 PF17151 Periplasmic sensor domain CSW01_17005 PF00990 Diguanylate cyclase, GGDEF domain CSW01_17025 PF17158 Membrane-associated sensor, integral membrane domain CSW01_17025 PF00990 Diguanylate cyclase, GGDEF domain CSW01_17040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CSW01_17040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CSW01_17040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CSW01_17045 PF02233 NAD(P) transhydrogenase beta subunit CSW01_17055 PF00486 Transcriptional regulatory protein, C terminal CSW01_17055 PF00072 Response regulator receiver domain CSW01_17070 PF03701 Uncharacterised protein family (UPF0181) CSW01_17075 PF01253 Translation initiation factor SUI1 CSW01_17085 PF01820 D-ala D-ala ligase N-terminus CSW01_17085 PF07478 D-ala D-ala ligase C-terminus CSW01_17095 PF13607 Succinyl-CoA ligase like flavodoxin domain CSW01_17095 PF00583 Acetyltransferase (GNAT) family CSW01_17095 PF13380 CoA binding domain CSW01_17100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_17100 PF03466 LysR substrate binding domain CSW01_17105 PF07715 TonB-dependent Receptor Plug Domain CSW01_17105 PF00593 TonB dependent receptor CSW01_17115 PF12793 Sugar transport-related sRNA regulator N-term CSW01_17115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_17125 PF03061 Thioesterase superfamily CSW01_17150 PF00043 Glutathione S-transferase, C-terminal domain CSW01_17150 PF02798 Glutathione S-transferase, N-terminal domain CSW01_17165 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_17165 PF03479 Plants and Prokaryotes Conserved (PCC) domain CSW01_17165 PF12804 MobA-like NTP transferase domain CSW01_17170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_17170 PF00005 ABC transporter CSW01_17175 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW01_17175 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17180 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW01_17210 PF00854 POT family CSW01_17220 PF00392 Bacterial regulatory proteins, gntR family CSW01_17220 PF07702 UTRA domain CSW01_17225 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17230 PF00005 ABC transporter CSW01_17240 PF00266 Aminotransferase class-V CSW01_17250 PF13419 Haloacid dehalogenase-like hydrolase CSW01_17255 PF14760 Rnk N-terminus CSW01_17255 PF01272 Transcription elongation factor, GreA/GreB, C-term CSW01_17260 PF13419 Haloacid dehalogenase-like hydrolase CSW01_17275 PF01741 Large-conductance mechanosensitive channel, MscL CSW01_17280 PF01268 Formate--tetrahydrofolate ligase CSW01_17285 PF01625 Peptide methionine sulfoxide reductase CSW01_17285 PF01641 SelR domain CSW01_17290 PF01227 GTP cyclohydrolase I CSW01_17295 PF00994 Probable molybdopterin binding domain CSW01_17295 PF03454 MoeA C-terminal region (domain IV) CSW01_17295 PF03453 MoeA N-terminal region (domain I and II) CSW01_17300 PF00899 ThiF family CSW01_17310 PF00581 Rhodanese-like domain CSW01_17315 PF04198 Putative sugar-binding domain CSW01_17325 PF00923 Transaldolase/Fructose-6-phosphate aldolase CSW01_17330 PF02779 Transketolase, pyrimidine binding domain CSW01_17330 PF02780 Transketolase, C-terminal domain CSW01_17330 PF00456 Transketolase, thiamine diphosphate binding domain CSW01_17345 PF02810 SEC-C motif CSW01_17345 PF07517 SecA DEAD-like domain CSW01_17345 PF01043 SecA preprotein cross-linking domain CSW01_17345 PF07516 SecA Wing and Scaffold domain CSW01_17355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW01_17355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW01_17370 PF06942 GlpM protein CSW01_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_17380 PF03466 LysR substrate binding domain CSW01_17385 PF03992 Antibiotic biosynthesis monooxygenase CSW01_17390 PF00881 Nitroreductase family CSW01_17400 PF00873 AcrB/AcrD/AcrF family CSW01_17415 PF04143 Sulphur transport CSW01_17430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW01_17430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW01_17475 PF02378 Phosphotransferase system, EIIC CSW01_17475 PF00367 phosphotransferase system, EIIB CSW01_17485 PF08244 Glycosyl hydrolases family 32 C terminal CSW01_17485 PF00251 Glycosyl hydrolases family 32 N-terminal domain CSW01_17490 PF00294 pfkB family carbohydrate kinase CSW01_17495 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CSW01_17495 PF01266 FAD dependent oxidoreductase CSW01_17500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_17500 PF00672 HAMP domain CSW01_17505 PF00691 OmpA family CSW01_17505 PF13488 Glycine zipper CSW01_17510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CSW01_17510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW01_17515 PF13419 Haloacid dehalogenase-like hydrolase CSW01_17520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_17520 PF12729 Four helix bundle sensory module for signal transduction CSW01_17520 PF00672 HAMP domain CSW01_17530 PF03606 C4-dicarboxylate anaerobic carrier CSW01_17535 PF03315 Serine dehydratase beta chain CSW01_17535 PF03313 Serine dehydratase alpha chain CSW01_17540 PF00474 Sodium:solute symporter family CSW01_17555 PF00356 Bacterial regulatory proteins, lacI family CSW01_17560 PF00072 Response regulator receiver domain CSW01_17560 PF00196 Bacterial regulatory proteins, luxR family CSW01_17565 PF07730 Histidine kinase CSW01_17565 PF00672 HAMP domain CSW01_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_17565 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CSW01_17570 PF12838 4Fe-4S dicluster domain CSW01_17570 PF13187 4Fe-4S dicluster domain CSW01_17580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSW01_17580 PF00384 Molybdopterin oxidoreductase CSW01_17580 PF01568 Molydopterin dinucleotide binding domain CSW01_17585 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CSW01_17590 PF03264 NapC/NirT cytochrome c family, N-terminal region CSW01_17600 PF01966 HD domain CSW01_17605 PF00072 Response regulator receiver domain CSW01_17605 PF00196 Bacterial regulatory proteins, luxR family CSW01_17610 PF07730 Histidine kinase CSW01_17610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_17610 PF05231 MASE1 CSW01_17615 PF07690 Major Facilitator Superfamily CSW01_17625 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17630 PF08402 TOBE domain CSW01_17630 PF00005 ABC transporter CSW01_17635 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CSW01_17645 PF02803 Thiolase, C-terminal domain CSW01_17645 PF00108 Thiolase, N-terminal domain CSW01_17650 PF00106 short chain dehydrogenase CSW01_17655 PF02355 Protein export membrane protein CSW01_17655 PF07549 SecD/SecF GG Motif CSW01_17660 PF07549 SecD/SecF GG Motif CSW01_17660 PF13721 SecD export protein N-terminal TM region CSW01_17660 PF02355 Protein export membrane protein CSW01_17675 PF00990 Diguanylate cyclase, GGDEF domain CSW01_17675 PF17158 Membrane-associated sensor, integral membrane domain CSW01_17680 PF00483 Nucleotidyl transferase CSW01_17685 PF00704 Glycosyl hydrolases family 18 CSW01_17685 PF06483 Chitinase C CSW01_17690 PF00465 Iron-containing alcohol dehydrogenase CSW01_17700 PF02954 Bacterial regulatory protein, Fis family CSW01_17700 PF00072 Response regulator receiver domain CSW01_17700 PF14532 Sigma-54 interaction domain CSW01_17705 PF02743 Cache domain CSW01_17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_17705 PF00512 His Kinase A (phospho-acceptor) domain CSW01_17715 PF07690 Major Facilitator Superfamily CSW01_17720 PF00224 Pyruvate kinase, barrel domain CSW01_17720 PF02887 Pyruvate kinase, alpha/beta domain CSW01_17725 PF00672 HAMP domain CSW01_17725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_17725 PF00512 His Kinase A (phospho-acceptor) domain CSW01_17725 PF01627 Hpt domain CSW01_17725 PF00072 Response regulator receiver domain CSW01_17730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW01_17735 PF02142 MGS-like domain CSW01_17740 PF00857 Isochorismatase family CSW01_17745 PF01219 Prokaryotic diacylglycerol kinase CSW01_17760 PF13361 UvrD-like helicase C-terminal domain CSW01_17760 PF00580 UvrD/REP helicase N-terminal domain CSW01_17760 PF12462 DNA helicase IV / RNA helicase N terminal CSW01_17765 PF12805 FUSC-like inner membrane protein yccS CSW01_17770 PF13188 PAS domain CSW01_17770 PF08448 PAS fold CSW01_17770 PF00512 His Kinase A (phospho-acceptor) domain CSW01_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_17770 PF00072 Response regulator receiver domain CSW01_17795 PF03459 TOBE domain CSW01_17795 PF00005 ABC transporter CSW01_17800 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17810 PF07685 CobB/CobQ-like glutamine amidotransferase domain CSW01_17810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CSW01_17855 PF00072 Response regulator receiver domain CSW01_17855 PF09308 LuxQ, periplasmic CSW01_17855 PF00512 His Kinase A (phospho-acceptor) domain CSW01_17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_17860 PF13407 Periplasmic binding protein domain CSW01_17870 PF01541 GIY-YIG catalytic domain CSW01_17875 PF04337 Protein of unknown function, DUF480 CSW01_17885 PF04363 Protein of unknown function (DUF496) CSW01_17900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSW01_17900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSW01_17905 PF00230 Major intrinsic protein CSW01_17910 PF01266 FAD dependent oxidoreductase CSW01_17910 PF04324 BFD-like [2Fe-2S] binding domain CSW01_17915 PF00890 FAD binding domain CSW01_17920 PF02754 Cysteine-rich domain CSW01_17920 PF13183 4Fe-4S dicluster domain CSW01_17925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CSW01_17925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CSW01_17930 PF00085 Thioredoxin CSW01_17935 PF07690 Major Facilitator Superfamily CSW01_17960 PF03466 LysR substrate binding domain CSW01_17960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_17965 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17970 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_17975 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_17980 PF00005 ABC transporter CSW01_17990 PF05762 VWA domain containing CoxE-like protein CSW01_17995 PF12592 Protein of unknown function (DUF3763) CSW01_17995 PF17868 AAA lid domain CSW01_17995 PF07728 AAA domain (dynein-related subfamily) CSW01_18000 PF00293 NUDIX domain CSW01_18005 PF01212 Beta-eliminating lyase CSW01_18010 PF00034 Cytochrome c CSW01_18015 PF08361 MAATS-type transcriptional repressor, C-terminal region CSW01_18015 PF00440 Bacterial regulatory proteins, tetR family CSW01_18020 PF00271 Helicase conserved C-terminal domain CSW01_18020 PF00270 DEAD/DEAH box helicase CSW01_18025 PF04336 Acyl carrier protein phosphodiesterase CSW01_18035 PF03222 Tryptophan/tyrosine permease family CSW01_18040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_18040 PF00672 HAMP domain CSW01_18040 PF12729 Four helix bundle sensory module for signal transduction CSW01_18045 PF16363 GDP-mannose 4,6 dehydratase CSW01_18055 PF03746 LamB/YcsF family CSW01_18065 PF02626 Carboxyltransferase domain, subdomain A and B CSW01_18075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CSW01_18075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CSW01_18085 PF00005 ABC transporter CSW01_18090 PF13472 GDSL-like Lipase/Acylhydrolase family CSW01_18095 PF12241 Trans-2-enoyl-CoA reductase catalytic region CSW01_18095 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CSW01_18095 PF07055 Enoyl reductase FAD binding domain CSW01_18100 PF00563 EAL domain CSW01_18100 PF00498 FHA domain CSW01_18100 PF00990 Diguanylate cyclase, GGDEF domain CSW01_18115 PF00684 DnaJ central domain CSW01_18115 PF00226 DnaJ domain CSW01_18115 PF01556 DnaJ C terminal domain CSW01_18145 PF02796 Helix-turn-helix domain of resolvase CSW01_18145 PF00239 Resolvase, N terminal domain CSW01_18155 PF13419 Haloacid dehalogenase-like hydrolase CSW01_18170 PF00294 pfkB family carbohydrate kinase CSW01_18175 PF00884 Sulfatase CSW01_18185 PF00270 DEAD/DEAH box helicase CSW01_18185 PF00271 Helicase conserved C-terminal domain CSW01_18185 PF03880 DbpA RNA binding domain CSW01_18190 PF08206 Ribonuclease B OB domain CSW01_18190 PF00575 S1 RNA binding domain CSW01_18190 PF00773 RNB domain CSW01_18200 PF12849 PBP superfamily domain CSW01_18205 PF01575 MaoC like domain CSW01_18210 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CSW01_18215 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CSW01_18215 PF18416 N-acetylglucosamine binding protein domain 2 CSW01_18220 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW01_18220 PF01447 Thermolysin metallopeptidase, catalytic domain CSW01_18220 PF03413 Peptidase propeptide and YPEB domain CSW01_18220 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW01_18220 PF04151 Bacterial pre-peptidase C-terminal domain CSW01_18225 PF04151 Bacterial pre-peptidase C-terminal domain CSW01_18225 PF04389 Peptidase family M28 CSW01_18230 PF00491 Arginase family CSW01_18235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CSW01_18235 PF17944 Arginine decarboxylase C-terminal helical extension CSW01_18235 PF17810 Arginine decarboxylase helical bundle domain CSW01_18250 PF00166 Chaperonin 10 Kd subunit CSW01_18255 PF00118 TCP-1/cpn60 chaperonin family CSW01_18265 PF00696 Amino acid kinase family CSW01_18265 PF13840 ACT domain CSW01_18270 PF06339 Ectoine synthase CSW01_18275 PF00202 Aminotransferase class-III CSW01_18280 PF00583 Acetyltransferase (GNAT) family CSW01_18285 PF01329 Pterin 4 alpha carbinolamine dehydratase CSW01_18290 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CSW01_18320 PF03466 LysR substrate binding domain CSW01_18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_18330 PF00892 EamA-like transporter family CSW01_18335 PF14602 Hexapeptide repeat of succinyl-transferase CSW01_18335 PF00132 Bacterial transferase hexapeptide (six repeats) CSW01_18335 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CSW01_18340 PF00571 CBS domain CSW01_18340 PF03471 Transporter associated domain CSW01_18340 PF01595 Cyclin M transmembrane N-terminal domain CSW01_18345 PF02566 OsmC-like protein CSW01_18350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW01_18355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSW01_18355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSW01_18370 PF13520 Amino acid permease CSW01_18375 PF00990 Diguanylate cyclase, GGDEF domain CSW01_18385 PF04397 LytTr DNA-binding domain CSW01_18385 PF00072 Response regulator receiver domain CSW01_18390 PF06580 Histidine kinase CSW01_18390 PF07694 5TMR of 5TMR-LYT CSW01_18390 PF13492 GAF domain CSW01_18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_18405 PF02687 FtsX-like permease family CSW01_18405 PF12704 MacB-like periplasmic core domain CSW01_18405 PF00005 ABC transporter CSW01_18410 PF00005 ABC transporter CSW01_18425 PF00248 Aldo/keto reductase family CSW01_18430 PF00128 Alpha amylase, catalytic domain CSW01_18440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CSW01_18445 PF12262 Bacterial virulence factor lipase N-terminal CSW01_18450 PF08447 PAS fold CSW01_18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_18450 PF13426 PAS domain CSW01_18455 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW01_18455 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW01_18455 PF03413 Peptidase propeptide and YPEB domain CSW01_18455 PF01447 Thermolysin metallopeptidase, catalytic domain CSW01_18455 PF04151 Bacterial pre-peptidase C-terminal domain CSW01_18465 PF03922 OmpW family CSW01_18475 PF00768 D-alanyl-D-alanine carboxypeptidase CSW01_18480 PF00392 Bacterial regulatory proteins, gntR family CSW01_18480 PF00155 Aminotransferase class I and II CSW01_18485 PF01654 Cytochrome bd terminal oxidase subunit I CSW01_18490 PF02322 Cytochrome bd terminal oxidase subunit II CSW01_18510 PF00291 Pyridoxal-phosphate dependent enzyme CSW01_18515 PF03466 LysR substrate binding domain CSW01_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_18565 PF08240 Alcohol dehydrogenase GroES-like domain CSW01_18565 PF00107 Zinc-binding dehydrogenase CSW01_18570 PF00155 Aminotransferase class I and II CSW01_18590 PF03466 LysR substrate binding domain CSW01_18590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_18595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW01_18620 PF01966 HD domain CSW01_18625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CSW01_18625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CSW01_18630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CSW01_18635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSW01_18635 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CSW01_18660 PF02595 Glycerate kinase family CSW01_18665 PF02447 GntP family permease CSW01_18670 PF13556 PucR C-terminal helix-turn-helix domain CSW01_18670 PF05651 Putative sugar diacid recognition CSW01_18670 PF17853 GGDEF-like domain CSW01_18675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_18675 PF00672 HAMP domain CSW01_18680 PF01243 Pyridoxamine 5'-phosphate oxidase CSW01_18685 PF06228 Haem utilisation ChuX/HutX CSW01_18690 PF04055 Radical SAM superfamily CSW01_18695 PF03544 Gram-negative bacterial TonB protein C-terminal CSW01_18700 PF01618 MotA/TolQ/ExbB proton channel family CSW01_18705 PF02472 Biopolymer transport protein ExbD/TolR CSW01_18710 PF01497 Periplasmic binding protein CSW01_18715 PF01032 FecCD transport family CSW01_18720 PF00005 ABC transporter CSW01_18750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_18750 PF00672 HAMP domain CSW01_18750 PF02743 Cache domain CSW01_18755 PF00111 2Fe-2S iron-sulfur cluster binding domain CSW01_18755 PF03473 MOSC domain CSW01_18755 PF03476 MOSC N-terminal beta barrel domain CSW01_18755 PF00111 2Fe-2S iron-sulfur cluster binding domain CSW01_18755 PF03473 MOSC domain CSW01_18755 PF03476 MOSC N-terminal beta barrel domain CSW01_18760 PF01979 Amidohydrolase family CSW01_18770 PF05656 Protein of unknown function (DUF805) CSW01_18780 PF05958 tRNA (Uracil-5-)-methyltransferase CSW01_18785 PF05661 Protein of unknown function (DUF808) CSW01_18795 PF00313 'Cold-shock' DNA-binding domain CSW01_18825 PF08448 PAS fold CSW01_18825 PF00990 Diguanylate cyclase, GGDEF domain CSW01_18830 PF00455 DeoR C terminal sensor domain CSW01_18830 PF08220 DeoR-like helix-turn-helix domain CSW01_18845 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_18850 PF14785 Maltose transport system permease protein MalF P2 domain CSW01_18850 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_18855 PF01547 Bacterial extracellular solute-binding protein CSW01_18860 PF08402 TOBE domain CSW01_18860 PF00005 ABC transporter CSW01_18865 PF13302 Acetyltransferase (GNAT) domain CSW01_18880 PF01906 Putative heavy-metal-binding CSW01_18885 PF00196 Bacterial regulatory proteins, luxR family CSW01_18895 PF01584 CheW-like domain CSW01_18895 PF00072 Response regulator receiver domain CSW01_18900 PF01047 MarR family CSW01_18905 PF00990 Diguanylate cyclase, GGDEF domain CSW01_18925 PF03707 Bacterial signalling protein N terminal repeat CSW01_18925 PF00990 Diguanylate cyclase, GGDEF domain CSW01_18925 PF00563 EAL domain CSW01_18945 PF03466 LysR substrate binding domain CSW01_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_18950 PF00990 Diguanylate cyclase, GGDEF domain CSW01_18950 PF00563 EAL domain CSW01_18960 PF05726 Pirin C-terminal cupin domain CSW01_18960 PF02678 Pirin CSW01_18965 PF06865 Pyrimidine/purine nucleoside phosphorylase CSW01_18975 PF07690 Major Facilitator Superfamily CSW01_18985 PF00672 HAMP domain CSW01_18985 PF17200 Single Cache domain 2 CSW01_18985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_18990 PF13654 AAA domain CSW01_18990 PF05362 Lon protease (S16) C-terminal proteolytic domain CSW01_19000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_19000 PF00005 ABC transporter CSW01_19005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_19010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19010 PF13426 PAS domain CSW01_19010 PF08447 PAS fold CSW01_19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_19025 PF03466 LysR substrate binding domain CSW01_19030 PF02652 L-lactate permease CSW01_19035 PF01070 FMN-dependent dehydrogenase CSW01_19045 PF03618 Kinase/pyrophosphorylase CSW01_19050 PF02896 PEP-utilising enzyme, TIM barrel domain CSW01_19050 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CSW01_19050 PF00391 PEP-utilising enzyme, mobile domain CSW01_19055 PF08447 PAS fold CSW01_19055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19060 PF01554 MatE CSW01_19065 PF00270 DEAD/DEAH box helicase CSW01_19065 PF00271 Helicase conserved C-terminal domain CSW01_19070 PF03466 LysR substrate binding domain CSW01_19070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_19080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSW01_19090 PF00664 ABC transporter transmembrane region CSW01_19090 PF00005 ABC transporter CSW01_19100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSW01_19110 PF01810 LysE type translocator CSW01_19115 PF12833 Helix-turn-helix domain CSW01_19130 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSW01_19135 PF01047 MarR family CSW01_19140 PF02566 OsmC-like protein CSW01_19145 PF13609 Gram-negative porin CSW01_19150 PF00892 EamA-like transporter family CSW01_19155 PF00462 Glutaredoxin CSW01_19160 PF07670 Nucleoside recognition CSW01_19165 PF07670 Nucleoside recognition CSW01_19170 PF03600 Citrate transporter CSW01_19180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSW01_19180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CSW01_19185 PF06029 AlkA N-terminal domain CSW01_19185 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW01_19190 PF07681 DoxX CSW01_19195 PF03466 LysR substrate binding domain CSW01_19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_19215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CSW01_19225 PF07148 Maltose operon periplasmic protein precursor (MalM) CSW01_19230 PF02264 LamB porin CSW01_19235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSW01_19235 PF00128 Alpha amylase, catalytic domain CSW01_19245 PF00672 HAMP domain CSW01_19245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19245 PF16591 Helical bimodular sensor domain CSW01_19260 PF00672 HAMP domain CSW01_19260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19270 PF00793 DAHP synthetase I family CSW01_19275 PF00005 ABC transporter CSW01_19280 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_19285 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW01_19290 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_19295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW01_19295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW01_19295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW01_19295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW01_19305 PF01551 Peptidase family M23 CSW01_19305 PF04225 Opacity-associated protein A LysM-like domain CSW01_19315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW01_19315 PF02378 Phosphotransferase system, EIIC CSW01_19315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW01_19320 PF01232 Mannitol dehydrogenase Rossmann domain CSW01_19320 PF08125 Mannitol dehydrogenase C-terminal domain CSW01_19325 PF05068 Mannitol repressor CSW01_19330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSW01_19360 PF13460 NAD(P)H-binding CSW01_19365 PF03466 LysR substrate binding domain CSW01_19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_19370 PF00672 HAMP domain CSW01_19370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19370 PF02743 Cache domain CSW01_19375 PF00106 short chain dehydrogenase CSW01_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW01_19380 PF03466 LysR substrate binding domain CSW01_19385 PF04013 Putative SAM-dependent RNA methyltransferase CSW01_19390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CSW01_19400 PF13520 Amino acid permease CSW01_19405 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CSW01_19405 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CSW01_19405 PF01276 Orn/Lys/Arg decarboxylase, major domain CSW01_19420 PF00171 Aldehyde dehydrogenase family CSW01_19425 PF01037 Lrp/AsnC ligand binding domain CSW01_19430 PF02743 Cache domain CSW01_19430 PF00672 HAMP domain CSW01_19430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19440 PF00474 Sodium:solute symporter family CSW01_19450 PF00171 Aldehyde dehydrogenase family CSW01_19450 PF14850 DNA-binding domain of Proline dehydrogenase CSW01_19450 PF01619 Proline dehydrogenase CSW01_19450 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CSW01_19455 PF12833 Helix-turn-helix domain CSW01_19465 PF03781 Sulfatase-modifying factor enzyme 1 CSW01_19470 PF00072 Response regulator receiver domain CSW01_19470 PF00196 Bacterial regulatory proteins, luxR family CSW01_19475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CSW01_19475 PF01243 Pyridoxamine 5'-phosphate oxidase CSW01_19480 PF00529 HlyD membrane-fusion protein of T1SS CSW01_19495 PF00664 ABC transporter transmembrane region CSW01_19495 PF00005 ABC transporter CSW01_19495 PF03412 Peptidase C39 family CSW01_19505 PF00072 Response regulator receiver domain CSW01_19505 PF00486 Transcriptional regulatory protein, C terminal CSW01_19515 PF02743 Cache domain CSW01_19515 PF00672 HAMP domain CSW01_19515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19520 PF00072 Response regulator receiver domain CSW01_19520 PF01339 CheB methylesterase CSW01_19525 PF03975 CheD chemotactic sensory transduction CSW01_19530 PF03705 CheR methyltransferase, all-alpha domain CSW01_19530 PF01739 CheR methyltransferase, SAM binding domain CSW01_19535 PF02203 Tar ligand binding domain homologue CSW01_19535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW01_19535 PF00672 HAMP domain CSW01_19540 PF01584 CheW-like domain CSW01_19545 PF01584 CheW-like domain CSW01_19550 PF01584 CheW-like domain CSW01_19550 PF09078 CheY binding CSW01_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_19550 PF01627 Hpt domain CSW01_19550 PF02895 Signal transducing histidine kinase, homodimeric domain CSW01_19555 PF00072 Response regulator receiver domain CSW01_19570 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_19575 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW01_19575 PF00528 Binding-protein-dependent transport system inner membrane component CSW01_19580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW01_19580 PF00005 ABC transporter CSW01_19585 PF08019 Phosphoethanolamine transferase EptA/EptB CSW01_19585 PF00884 Sulfatase CSW01_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW01_19590 PF00512 His Kinase A (phospho-acceptor) domain CSW01_19590 PF08521 Two-component sensor kinase N-terminal CSW01_19595 PF00486 Transcriptional regulatory protein, C terminal CSW01_19595 PF00072 Response regulator receiver domain CSW01_19615 PF00501 AMP-binding enzyme CSW01_19625 PF05127 Helicase CSW01_19625 PF13718 GNAT acetyltransferase 2 CSW01_19630 PF13416 Bacterial extracellular solute-binding protein CSW01_19635 PF02195 ParB-like nuclease domain CSW01_19635 PF08775 ParB family CSW01_19640 PF13614 AAA domain CSW01_19640 PF18607 ParA helix turn helix domain