locus-tag class description A6J62_00010 PF13419 Haloacid dehalogenase-like hydrolase A6J62_00015 PF00196 Bacterial regulatory proteins, luxR family A6J62_00015 PF00563 EAL domain A6J62_00020 PF00581 Rhodanese-like domain A6J62_00025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A6J62_00025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6J62_00030 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A6J62_00030 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A6J62_00045 PF02868 Thermolysin metallopeptidase, alpha-helical domain A6J62_00045 PF01447 Thermolysin metallopeptidase, catalytic domain A6J62_00045 PF01483 Proprotein convertase P-domain A6J62_00045 PF07504 Fungalysin/Thermolysin Propeptide Motif A6J62_00065 PF02001 Protein of unknown function DUF134 A6J62_00075 PF00375 Sodium:dicarboxylate symporter family A6J62_00095 PF09278 MerR, DNA binding A6J62_00095 PF00376 MerR family regulatory protein A6J62_00100 PF07690 Major Facilitator Superfamily A6J62_00105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_00105 PF03466 LysR substrate binding domain A6J62_00110 PF00563 EAL domain A6J62_00110 PF03707 Bacterial signalling protein N terminal repeat A6J62_00110 PF00990 Diguanylate cyclase, GGDEF domain A6J62_00110 PF13188 PAS domain A6J62_00115 PF08525 Opacity-associated protein A N-terminal motif A6J62_00115 PF01551 Peptidase family M23 A6J62_00115 PF01476 LysM domain A6J62_00125 PF00916 Sulfate permease family A6J62_00125 PF01740 STAS domain A6J62_00145 PF03707 Bacterial signalling protein N terminal repeat A6J62_00145 PF00563 EAL domain A6J62_00145 PF00990 Diguanylate cyclase, GGDEF domain A6J62_00150 PF00005 ABC transporter A6J62_00155 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_00160 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_00165 PF12849 PBP superfamily domain A6J62_00170 PF12729 Four helix bundle sensory module for signal transduction A6J62_00170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00170 PF00672 HAMP domain A6J62_00190 PF07715 TonB-dependent Receptor Plug Domain A6J62_00190 PF00593 TonB dependent receptor A6J62_00195 PF00326 Prolyl oligopeptidase family A6J62_00195 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6J62_00200 PF00270 DEAD/DEAH box helicase A6J62_00200 PF00271 Helicase conserved C-terminal domain A6J62_00210 PF03734 L,D-transpeptidase catalytic domain A6J62_00210 PF01476 LysM domain A6J62_00210 PF17969 L,D-transpeptidase C-terminal domain A6J62_00215 PF00875 DNA photolyase A6J62_00215 PF03441 FAD binding domain of DNA photolyase A6J62_00220 PF13411 MerR HTH family regulatory protein A6J62_00225 PF08349 Protein of unknown function (DUF1722) A6J62_00235 PF01048 Phosphorylase superfamily A6J62_00250 PF00990 Diguanylate cyclase, GGDEF domain A6J62_00255 PF11742 Protein of unknown function (DUF3302) A6J62_00260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_00260 PF00529 HlyD membrane-fusion protein of T1SS A6J62_00275 PF07238 PilZ domain A6J62_00275 PF12945 Flagellar protein YcgR A6J62_00280 PF03616 Sodium/glutamate symporter A6J62_00295 PF02630 SCO1/SenC A6J62_00305 PF00375 Sodium:dicarboxylate symporter family A6J62_00310 PF01569 PAP2 superfamily A6J62_00330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00330 PF00672 HAMP domain A6J62_00330 PF02743 Cache domain A6J62_00350 PF08329 Chitinase A, N-terminal domain A6J62_00350 PF00704 Glycosyl hydrolases family 18 A6J62_00355 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6J62_00360 PF00939 Sodium:sulfate symporter transmembrane region A6J62_00370 PF01168 Alanine racemase, N-terminal domain A6J62_00370 PF00842 Alanine racemase, C-terminal domain A6J62_00370 PF01757 Acyltransferase family A6J62_00395 PF04717 Type VI secretion system, phage-baseplate injector A6J62_00395 PF16671 Actin cross-linking domain A6J62_00400 PF05638 Type VI secretion system effector, Hcp A6J62_00410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6J62_00410 PF02806 Alpha amylase, C-terminal all-beta domain A6J62_00410 PF00128 Alpha amylase, catalytic domain A6J62_00415 PF02446 4-alpha-glucanotransferase A6J62_00420 PF00343 Carbohydrate phosphorylase A6J62_00425 PF00196 Bacterial regulatory proteins, luxR family A6J62_00425 PF17874 MalT-like TPR region A6J62_00430 PF10928 Protein of unknown function (DUF2810) A6J62_00440 PF17200 Single Cache domain 2 A6J62_00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00440 PF00672 HAMP domain A6J62_00445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A6J62_00445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6J62_00450 PF01709 Transcriptional regulator A6J62_00480 PF18607 ParA helix turn helix domain A6J62_00480 PF13614 AAA domain A6J62_00485 PF08775 ParB family A6J62_00485 PF02195 ParB-like nuclease domain A6J62_00490 PF13416 Bacterial extracellular solute-binding protein A6J62_00495 PF05127 Helicase A6J62_00495 PF13718 GNAT acetyltransferase 2 A6J62_00505 PF00501 AMP-binding enzyme A6J62_00525 PF00072 Response regulator receiver domain A6J62_00525 PF00486 Transcriptional regulatory protein, C terminal A6J62_00530 PF08521 Two-component sensor kinase N-terminal A6J62_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_00530 PF00512 His Kinase A (phospho-acceptor) domain A6J62_00535 PF00884 Sulfatase A6J62_00535 PF08019 Phosphoethanolamine transferase EptA/EptB A6J62_00540 PF00005 ABC transporter A6J62_00540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_00545 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J62_00545 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_00550 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_00565 PF00072 Response regulator receiver domain A6J62_00570 PF09078 CheY binding A6J62_00570 PF01584 CheW-like domain A6J62_00570 PF02895 Signal transducing histidine kinase, homodimeric domain A6J62_00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_00570 PF01627 Hpt domain A6J62_00575 PF01584 CheW-like domain A6J62_00580 PF01584 CheW-like domain A6J62_00585 PF02203 Tar ligand binding domain homologue A6J62_00585 PF00672 HAMP domain A6J62_00585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00590 PF01739 CheR methyltransferase, SAM binding domain A6J62_00590 PF03705 CheR methyltransferase, all-alpha domain A6J62_00595 PF03975 CheD chemotactic sensory transduction A6J62_00600 PF01339 CheB methylesterase A6J62_00600 PF00072 Response regulator receiver domain A6J62_00605 PF00672 HAMP domain A6J62_00605 PF02743 Cache domain A6J62_00605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00615 PF00486 Transcriptional regulatory protein, C terminal A6J62_00615 PF00072 Response regulator receiver domain A6J62_00625 PF00005 ABC transporter A6J62_00625 PF00664 ABC transporter transmembrane region A6J62_00625 PF03412 Peptidase C39 family A6J62_00640 PF00529 HlyD membrane-fusion protein of T1SS A6J62_00645 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A6J62_00645 PF01243 Pyridoxamine 5'-phosphate oxidase A6J62_00650 PF00072 Response regulator receiver domain A6J62_00650 PF00196 Bacterial regulatory proteins, luxR family A6J62_00655 PF03781 Sulfatase-modifying factor enzyme 1 A6J62_00665 PF12833 Helix-turn-helix domain A6J62_00670 PF01619 Proline dehydrogenase A6J62_00670 PF00171 Aldehyde dehydrogenase family A6J62_00670 PF14850 DNA-binding domain of Proline dehydrogenase A6J62_00670 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A6J62_00680 PF00474 Sodium:solute symporter family A6J62_00690 PF00672 HAMP domain A6J62_00690 PF02743 Cache domain A6J62_00690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00695 PF01037 Lrp/AsnC ligand binding domain A6J62_00700 PF00171 Aldehyde dehydrogenase family A6J62_00715 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A6J62_00715 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A6J62_00715 PF01276 Orn/Lys/Arg decarboxylase, major domain A6J62_00720 PF13520 Amino acid permease A6J62_00730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6J62_00735 PF04013 Putative SAM-dependent RNA methyltransferase A6J62_00740 PF03466 LysR substrate binding domain A6J62_00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_00745 PF00106 short chain dehydrogenase A6J62_00750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00750 PF00672 HAMP domain A6J62_00750 PF02743 Cache domain A6J62_00755 PF03466 LysR substrate binding domain A6J62_00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_00760 PF13460 NAD(P)H-binding A6J62_00790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6J62_00795 PF05068 Mannitol repressor A6J62_00800 PF01232 Mannitol dehydrogenase Rossmann domain A6J62_00800 PF08125 Mannitol dehydrogenase C-terminal domain A6J62_00805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J62_00805 PF02378 Phosphotransferase system, EIIC A6J62_00805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J62_00815 PF04225 Opacity-associated protein A LysM-like domain A6J62_00815 PF01551 Peptidase family M23 A6J62_00825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J62_00825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J62_00825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J62_00825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J62_00830 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_00835 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_00840 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_00845 PF00005 ABC transporter A6J62_00850 PF00793 DAHP synthetase I family A6J62_00860 PF00672 HAMP domain A6J62_00860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_00875 PF00672 HAMP domain A6J62_00875 PF12729 Four helix bundle sensory module for signal transduction A6J62_00885 PF00128 Alpha amylase, catalytic domain A6J62_00885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6J62_00890 PF02264 LamB porin A6J62_00895 PF07148 Maltose operon periplasmic protein precursor (MalM) A6J62_00905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A6J62_00925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_00925 PF03466 LysR substrate binding domain A6J62_00930 PF07681 DoxX A6J62_00935 PF06029 AlkA N-terminal domain A6J62_00935 PF00730 HhH-GPD superfamily base excision DNA repair protein A6J62_00940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6J62_00940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A6J62_00950 PF03600 Citrate transporter A6J62_00955 PF07670 Nucleoside recognition A6J62_00960 PF07670 Nucleoside recognition A6J62_00965 PF00462 Glutaredoxin A6J62_00970 PF00892 EamA-like transporter family A6J62_00975 PF13609 Gram-negative porin A6J62_00980 PF02566 OsmC-like protein A6J62_00985 PF01047 MarR family A6J62_00990 PF01557 Fumarylacetoacetate (FAA) hydrolase family A6J62_01005 PF12833 Helix-turn-helix domain A6J62_01010 PF01810 LysE type translocator A6J62_01020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J62_01030 PF00005 ABC transporter A6J62_01030 PF00664 ABC transporter transmembrane region A6J62_01040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J62_01050 PF03466 LysR substrate binding domain A6J62_01050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_01055 PF00270 DEAD/DEAH box helicase A6J62_01055 PF00271 Helicase conserved C-terminal domain A6J62_01060 PF01554 MatE A6J62_01065 PF08447 PAS fold A6J62_01065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_01070 PF00391 PEP-utilising enzyme, mobile domain A6J62_01070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A6J62_01070 PF02896 PEP-utilising enzyme, TIM barrel domain A6J62_01075 PF03618 Kinase/pyrophosphorylase A6J62_01085 PF01070 FMN-dependent dehydrogenase A6J62_01090 PF02652 L-lactate permease A6J62_01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_01095 PF03466 LysR substrate binding domain A6J62_01110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_01110 PF13426 PAS domain A6J62_01110 PF08447 PAS fold A6J62_01115 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_01120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_01120 PF00005 ABC transporter A6J62_01130 PF05362 Lon protease (S16) C-terminal proteolytic domain A6J62_01130 PF13654 AAA domain A6J62_01135 PF00672 HAMP domain A6J62_01135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_01135 PF17200 Single Cache domain 2 A6J62_01145 PF07690 Major Facilitator Superfamily A6J62_01155 PF06865 Pyrimidine/purine nucleoside phosphorylase A6J62_01160 PF02678 Pirin A6J62_01160 PF05726 Pirin C-terminal cupin domain A6J62_01170 PF00990 Diguanylate cyclase, GGDEF domain A6J62_01170 PF00563 EAL domain A6J62_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_01175 PF03466 LysR substrate binding domain A6J62_01195 PF03707 Bacterial signalling protein N terminal repeat A6J62_01195 PF00990 Diguanylate cyclase, GGDEF domain A6J62_01195 PF00563 EAL domain A6J62_01215 PF00990 Diguanylate cyclase, GGDEF domain A6J62_01220 PF01047 MarR family A6J62_01225 PF00072 Response regulator receiver domain A6J62_01225 PF01584 CheW-like domain A6J62_01235 PF00196 Bacterial regulatory proteins, luxR family A6J62_01240 PF01906 Putative heavy-metal-binding A6J62_01255 PF13302 Acetyltransferase (GNAT) domain A6J62_01260 PF08402 TOBE domain A6J62_01260 PF00005 ABC transporter A6J62_01265 PF01547 Bacterial extracellular solute-binding protein A6J62_01270 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_01270 PF14785 Maltose transport system permease protein MalF P2 domain A6J62_01275 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_01290 PF00455 DeoR C terminal sensor domain A6J62_01290 PF08220 DeoR-like helix-turn-helix domain A6J62_01295 PF00990 Diguanylate cyclase, GGDEF domain A6J62_01295 PF08448 PAS fold A6J62_01325 PF00313 'Cold-shock' DNA-binding domain A6J62_01335 PF05661 Protein of unknown function (DUF808) A6J62_01340 PF05958 tRNA (Uracil-5-)-methyltransferase A6J62_01350 PF05656 Protein of unknown function (DUF805) A6J62_01360 PF01979 Amidohydrolase family A6J62_01365 PF03476 MOSC N-terminal beta barrel domain A6J62_01365 PF03473 MOSC domain A6J62_01365 PF03476 MOSC N-terminal beta barrel domain A6J62_01365 PF03473 MOSC domain A6J62_01365 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J62_01365 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J62_01370 PF02743 Cache domain A6J62_01370 PF00672 HAMP domain A6J62_01370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_01400 PF00005 ABC transporter A6J62_01405 PF01032 FecCD transport family A6J62_01410 PF01497 Periplasmic binding protein A6J62_01415 PF02472 Biopolymer transport protein ExbD/TolR A6J62_01420 PF01618 MotA/TolQ/ExbB proton channel family A6J62_01425 PF03544 Gram-negative bacterial TonB protein C-terminal A6J62_01430 PF04055 Radical SAM superfamily A6J62_01435 PF06228 Haem utilisation ChuX/HutX A6J62_01440 PF01243 Pyridoxamine 5'-phosphate oxidase A6J62_01445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_01445 PF00672 HAMP domain A6J62_01450 PF05651 Putative sugar diacid recognition A6J62_01450 PF17853 GGDEF-like domain A6J62_01450 PF13556 PucR C-terminal helix-turn-helix domain A6J62_01455 PF02447 GntP family permease A6J62_01460 PF02595 Glycerate kinase family A6J62_01485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A6J62_01485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6J62_01490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A6J62_01495 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A6J62_01495 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A6J62_01500 PF01966 HD domain A6J62_01525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_01530 PF03466 LysR substrate binding domain A6J62_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_01550 PF00155 Aminotransferase class I and II A6J62_01555 PF00107 Zinc-binding dehydrogenase A6J62_01555 PF08240 Alcohol dehydrogenase GroES-like domain A6J62_01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_01605 PF03466 LysR substrate binding domain A6J62_01610 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_01625 PF02322 Cytochrome bd terminal oxidase subunit II A6J62_01630 PF01654 Cytochrome bd terminal oxidase subunit I A6J62_01635 PF00155 Aminotransferase class I and II A6J62_01635 PF00392 Bacterial regulatory proteins, gntR family A6J62_01640 PF00768 D-alanyl-D-alanine carboxypeptidase A6J62_01650 PF03922 OmpW family A6J62_01660 PF01447 Thermolysin metallopeptidase, catalytic domain A6J62_01660 PF07504 Fungalysin/Thermolysin Propeptide Motif A6J62_01660 PF03413 Peptidase propeptide and YPEB domain A6J62_01660 PF02868 Thermolysin metallopeptidase, alpha-helical domain A6J62_01660 PF04151 Bacterial pre-peptidase C-terminal domain A6J62_01665 PF13426 PAS domain A6J62_01665 PF08447 PAS fold A6J62_01665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_01670 PF12262 Bacterial virulence factor lipase N-terminal A6J62_01675 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J62_01685 PF00128 Alpha amylase, catalytic domain A6J62_01690 PF00248 Aldo/keto reductase family A6J62_01705 PF00005 ABC transporter A6J62_01710 PF12704 MacB-like periplasmic core domain A6J62_01710 PF02687 FtsX-like permease family A6J62_01710 PF00005 ABC transporter A6J62_01725 PF13492 GAF domain A6J62_01725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_01725 PF06580 Histidine kinase A6J62_01725 PF07694 5TMR of 5TMR-LYT A6J62_01730 PF00072 Response regulator receiver domain A6J62_01730 PF04397 LytTr DNA-binding domain A6J62_01740 PF00990 Diguanylate cyclase, GGDEF domain A6J62_01745 PF13520 Amino acid permease A6J62_01760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J62_01760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J62_01765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J62_01770 PF02566 OsmC-like protein A6J62_01775 PF00571 CBS domain A6J62_01775 PF03471 Transporter associated domain A6J62_01775 PF01595 Cyclin M transmembrane N-terminal domain A6J62_01780 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_01780 PF14602 Hexapeptide repeat of succinyl-transferase A6J62_01780 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal A6J62_01785 PF00892 EamA-like transporter family A6J62_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_01795 PF03466 LysR substrate binding domain A6J62_01820 PF00501 AMP-binding enzyme A6J62_01820 PF13193 AMP-binding enzyme C-terminal domain A6J62_01825 PF00351 Biopterin-dependent aromatic amino acid hydroxylase A6J62_01830 PF01329 Pterin 4 alpha carbinolamine dehydratase A6J62_01835 PF00583 Acetyltransferase (GNAT) family A6J62_01840 PF00202 Aminotransferase class-III A6J62_01845 PF06339 Ectoine synthase A6J62_01850 PF13840 ACT domain A6J62_01850 PF00696 Amino acid kinase family A6J62_01860 PF00118 TCP-1/cpn60 chaperonin family A6J62_01865 PF00166 Chaperonin 10 Kd subunit A6J62_01870 PF01769 Divalent cation transporter A6J62_01870 PF03448 MgtE intracellular N domain A6J62_01870 PF00571 CBS domain A6J62_01880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6J62_01880 PF17810 Arginine decarboxylase helical bundle domain A6J62_01880 PF17944 Arginine decarboxylase C-terminal helical extension A6J62_01885 PF00491 Arginase family A6J62_01890 PF04389 Peptidase family M28 A6J62_01890 PF04151 Bacterial pre-peptidase C-terminal domain A6J62_01895 PF02868 Thermolysin metallopeptidase, alpha-helical domain A6J62_01895 PF04151 Bacterial pre-peptidase C-terminal domain A6J62_01895 PF07504 Fungalysin/Thermolysin Propeptide Motif A6J62_01895 PF03413 Peptidase propeptide and YPEB domain A6J62_01895 PF01447 Thermolysin metallopeptidase, catalytic domain A6J62_01900 PF18416 N-acetylglucosamine binding protein domain 2 A6J62_01900 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading A6J62_01905 PF04244 Deoxyribodipyrimidine photo-lyase-related protein A6J62_01910 PF01575 MaoC like domain A6J62_01915 PF12849 PBP superfamily domain A6J62_01925 PF08206 Ribonuclease B OB domain A6J62_01925 PF00575 S1 RNA binding domain A6J62_01925 PF00773 RNB domain A6J62_01930 PF03880 DbpA RNA binding domain A6J62_01930 PF00271 Helicase conserved C-terminal domain A6J62_01930 PF00270 DEAD/DEAH box helicase A6J62_01940 PF00884 Sulfatase A6J62_01945 PF00294 pfkB family carbohydrate kinase A6J62_01960 PF13419 Haloacid dehalogenase-like hydrolase A6J62_01970 PF02796 Helix-turn-helix domain of resolvase A6J62_01970 PF00239 Resolvase, N terminal domain A6J62_02000 PF00684 DnaJ central domain A6J62_02000 PF01556 DnaJ C terminal domain A6J62_02000 PF00226 DnaJ domain A6J62_02015 PF00498 FHA domain A6J62_02015 PF00990 Diguanylate cyclase, GGDEF domain A6J62_02015 PF00563 EAL domain A6J62_02020 PF07055 Enoyl reductase FAD binding domain A6J62_02020 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6J62_02020 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6J62_02025 PF13472 GDSL-like Lipase/Acylhydrolase family A6J62_02030 PF00005 ABC transporter A6J62_02040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6J62_02040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6J62_02050 PF02626 Carboxyltransferase domain, subdomain A and B A6J62_02060 PF03746 LamB/YcsF family A6J62_02070 PF16363 GDP-mannose 4,6 dehydratase A6J62_02075 PF00672 HAMP domain A6J62_02075 PF12729 Four helix bundle sensory module for signal transduction A6J62_02075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_02080 PF03222 Tryptophan/tyrosine permease family A6J62_02090 PF04336 Acyl carrier protein phosphodiesterase A6J62_02095 PF00270 DEAD/DEAH box helicase A6J62_02095 PF00271 Helicase conserved C-terminal domain A6J62_02100 PF00440 Bacterial regulatory proteins, tetR family A6J62_02100 PF08361 MAATS-type transcriptional repressor, C-terminal region A6J62_02105 PF00034 Cytochrome c A6J62_02110 PF01212 Beta-eliminating lyase A6J62_02115 PF00293 NUDIX domain A6J62_02120 PF07728 AAA domain (dynein-related subfamily) A6J62_02120 PF17868 AAA lid domain A6J62_02120 PF12592 Protein of unknown function (DUF3763) A6J62_02125 PF05762 VWA domain containing CoxE-like protein A6J62_02135 PF00005 ABC transporter A6J62_02140 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_02145 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02150 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02155 PF03466 LysR substrate binding domain A6J62_02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_02180 PF07690 Major Facilitator Superfamily A6J62_02185 PF00085 Thioredoxin A6J62_02190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6J62_02190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6J62_02195 PF13183 4Fe-4S dicluster domain A6J62_02195 PF02754 Cysteine-rich domain A6J62_02200 PF00890 FAD binding domain A6J62_02205 PF01266 FAD dependent oxidoreductase A6J62_02205 PF04324 BFD-like [2Fe-2S] binding domain A6J62_02210 PF00230 Major intrinsic protein A6J62_02215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6J62_02215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6J62_02230 PF04363 Protein of unknown function (DUF496) A6J62_02240 PF04337 Protein of unknown function, DUF480 A6J62_02245 PF01541 GIY-YIG catalytic domain A6J62_02255 PF13407 Periplasmic binding protein domain A6J62_02260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_02260 PF00072 Response regulator receiver domain A6J62_02260 PF09308 LuxQ, periplasmic A6J62_02260 PF00512 His Kinase A (phospho-acceptor) domain A6J62_02305 PF07685 CobB/CobQ-like glutamine amidotransferase domain A6J62_02305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A6J62_02315 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02320 PF03459 TOBE domain A6J62_02320 PF00005 ABC transporter A6J62_02345 PF13188 PAS domain A6J62_02345 PF00512 His Kinase A (phospho-acceptor) domain A6J62_02345 PF00072 Response regulator receiver domain A6J62_02345 PF08448 PAS fold A6J62_02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_02350 PF12805 FUSC-like inner membrane protein yccS A6J62_02355 PF00580 UvrD/REP helicase N-terminal domain A6J62_02355 PF12462 DNA helicase IV / RNA helicase N terminal A6J62_02355 PF13361 UvrD-like helicase C-terminal domain A6J62_02370 PF01219 Prokaryotic diacylglycerol kinase A6J62_02375 PF00857 Isochorismatase family A6J62_02380 PF02142 MGS-like domain A6J62_02385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J62_02390 PF00072 Response regulator receiver domain A6J62_02390 PF01627 Hpt domain A6J62_02390 PF00512 His Kinase A (phospho-acceptor) domain A6J62_02390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_02390 PF00672 HAMP domain A6J62_02395 PF02887 Pyruvate kinase, alpha/beta domain A6J62_02395 PF00224 Pyruvate kinase, barrel domain A6J62_02400 PF07690 Major Facilitator Superfamily A6J62_02410 PF02743 Cache domain A6J62_02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_02410 PF00512 His Kinase A (phospho-acceptor) domain A6J62_02415 PF14532 Sigma-54 interaction domain A6J62_02415 PF02954 Bacterial regulatory protein, Fis family A6J62_02415 PF00072 Response regulator receiver domain A6J62_02425 PF00465 Iron-containing alcohol dehydrogenase A6J62_02435 PF06483 Chitinase C A6J62_02435 PF00704 Glycosyl hydrolases family 18 A6J62_02440 PF00483 Nucleotidyl transferase A6J62_02445 PF00990 Diguanylate cyclase, GGDEF domain A6J62_02445 PF17158 Membrane-associated sensor, integral membrane domain A6J62_02460 PF13721 SecD export protein N-terminal TM region A6J62_02460 PF02355 Protein export membrane protein A6J62_02460 PF07549 SecD/SecF GG Motif A6J62_02465 PF07549 SecD/SecF GG Motif A6J62_02465 PF02355 Protein export membrane protein A6J62_02470 PF00106 short chain dehydrogenase A6J62_02475 PF02803 Thiolase, C-terminal domain A6J62_02475 PF00108 Thiolase, N-terminal domain A6J62_02485 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus A6J62_02490 PF08402 TOBE domain A6J62_02490 PF00005 ABC transporter A6J62_02495 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02505 PF07690 Major Facilitator Superfamily A6J62_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_02510 PF05231 MASE1 A6J62_02510 PF07730 Histidine kinase A6J62_02515 PF00196 Bacterial regulatory proteins, luxR family A6J62_02515 PF00072 Response regulator receiver domain A6J62_02520 PF01966 HD domain A6J62_02530 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J62_02535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) A6J62_02540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J62_02540 PF01568 Molydopterin dinucleotide binding domain A6J62_02540 PF00384 Molybdopterin oxidoreductase A6J62_02550 PF12838 4Fe-4S dicluster domain A6J62_02550 PF13187 4Fe-4S dicluster domain A6J62_02555 PF00672 HAMP domain A6J62_02555 PF07730 Histidine kinase A6J62_02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_02555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A6J62_02560 PF00196 Bacterial regulatory proteins, luxR family A6J62_02560 PF00072 Response regulator receiver domain A6J62_02565 PF00356 Bacterial regulatory proteins, lacI family A6J62_02580 PF00474 Sodium:solute symporter family A6J62_02585 PF03313 Serine dehydratase alpha chain A6J62_02585 PF03315 Serine dehydratase beta chain A6J62_02590 PF03606 C4-dicarboxylate anaerobic carrier A6J62_02600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_02600 PF12729 Four helix bundle sensory module for signal transduction A6J62_02600 PF00672 HAMP domain A6J62_02605 PF13419 Haloacid dehalogenase-like hydrolase A6J62_02610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J62_02610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6J62_02615 PF00691 OmpA family A6J62_02615 PF13488 Glycine zipper A6J62_02620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_02620 PF00672 HAMP domain A6J62_02625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A6J62_02625 PF01266 FAD dependent oxidoreductase A6J62_02630 PF00294 pfkB family carbohydrate kinase A6J62_02635 PF08244 Glycosyl hydrolases family 32 C terminal A6J62_02635 PF00251 Glycosyl hydrolases family 32 N-terminal domain A6J62_02645 PF00367 phosphotransferase system, EIIB A6J62_02645 PF02378 Phosphotransferase system, EIIC A6J62_02690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J62_02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_02705 PF04143 Sulphur transport A6J62_02720 PF00873 AcrB/AcrD/AcrF family A6J62_02730 PF00881 Nitroreductase family A6J62_02735 PF03992 Antibiotic biosynthesis monooxygenase A6J62_02740 PF03466 LysR substrate binding domain A6J62_02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_02750 PF06942 GlpM protein A6J62_02765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J62_02765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J62_02775 PF01043 SecA preprotein cross-linking domain A6J62_02775 PF07516 SecA Wing and Scaffold domain A6J62_02775 PF07517 SecA DEAD-like domain A6J62_02775 PF02810 SEC-C motif A6J62_02790 PF02780 Transketolase, C-terminal domain A6J62_02790 PF02779 Transketolase, pyrimidine binding domain A6J62_02790 PF00456 Transketolase, thiamine diphosphate binding domain A6J62_02795 PF00923 Transaldolase/Fructose-6-phosphate aldolase A6J62_02805 PF04198 Putative sugar-binding domain A6J62_02810 PF00581 Rhodanese-like domain A6J62_02820 PF00899 ThiF family A6J62_02825 PF00994 Probable molybdopterin binding domain A6J62_02825 PF03454 MoeA C-terminal region (domain IV) A6J62_02825 PF03453 MoeA N-terminal region (domain I and II) A6J62_02830 PF01227 GTP cyclohydrolase I A6J62_02835 PF01625 Peptide methionine sulfoxide reductase A6J62_02835 PF01641 SelR domain A6J62_02840 PF01268 Formate--tetrahydrofolate ligase A6J62_02845 PF01741 Large-conductance mechanosensitive channel, MscL A6J62_02860 PF13419 Haloacid dehalogenase-like hydrolase A6J62_02865 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J62_02865 PF14760 Rnk N-terminus A6J62_02870 PF13419 Haloacid dehalogenase-like hydrolase A6J62_02880 PF00266 Aminotransferase class-V A6J62_02890 PF00005 ABC transporter A6J62_02895 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02900 PF07702 UTRA domain A6J62_02900 PF00392 Bacterial regulatory proteins, gntR family A6J62_02910 PF00854 POT family A6J62_02935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_02940 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02945 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_02945 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J62_02950 PF00005 ABC transporter A6J62_02950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_02955 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_02955 PF03479 Plants and Prokaryotes Conserved (PCC) domain A6J62_02955 PF12804 MobA-like NTP transferase domain A6J62_02970 PF02798 Glutathione S-transferase, N-terminal domain A6J62_02970 PF00043 Glutathione S-transferase, C-terminal domain A6J62_02995 PF03061 Thioesterase superfamily A6J62_03005 PF12793 Sugar transport-related sRNA regulator N-term A6J62_03005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_03015 PF07715 TonB-dependent Receptor Plug Domain A6J62_03015 PF00593 TonB dependent receptor A6J62_03020 PF03466 LysR substrate binding domain A6J62_03020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_03025 PF00583 Acetyltransferase (GNAT) family A6J62_03025 PF13380 CoA binding domain A6J62_03025 PF13607 Succinyl-CoA ligase like flavodoxin domain A6J62_03035 PF07478 D-ala D-ala ligase C-terminus A6J62_03035 PF01820 D-ala D-ala ligase N-terminus A6J62_03045 PF01253 Translation initiation factor SUI1 A6J62_03050 PF03701 Uncharacterised protein family (UPF0181) A6J62_03065 PF00072 Response regulator receiver domain A6J62_03065 PF00486 Transcriptional regulatory protein, C terminal A6J62_03075 PF02233 NAD(P) transhydrogenase beta subunit A6J62_03080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6J62_03080 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A6J62_03080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6J62_03095 PF17158 Membrane-associated sensor, integral membrane domain A6J62_03095 PF00990 Diguanylate cyclase, GGDEF domain A6J62_03115 PF17151 Periplasmic sensor domain A6J62_03115 PF00990 Diguanylate cyclase, GGDEF domain A6J62_03150 PF03831 PhnA domain A6J62_03150 PF08274 PhnA Zinc-Ribbon A6J62_03160 PF03741 Integral membrane protein TerC family A6J62_03165 PF00149 Calcineurin-like phosphoesterase A6J62_03165 PF02872 5'-nucleotidase, C-terminal domain A6J62_03170 PF11398 Protein of unknown function (DUF2813) A6J62_03175 PF06496 Protein of unknown function (DUF1097) A6J62_03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_03180 PF03466 LysR substrate binding domain A6J62_03185 PF01226 Formate/nitrite transporter A6J62_03190 PF04264 YceI-like domain A6J62_03195 PF01292 Prokaryotic cytochrome b561 A6J62_03205 PF10388 EAL-domain associated signalling protein domain A6J62_03205 PF00563 EAL domain A6J62_03215 PF09335 SNARE associated Golgi protein A6J62_03220 PF02416 mttA/Hcf106 family A6J62_03225 PF00072 Response regulator receiver domain A6J62_03225 PF00486 Transcriptional regulatory protein, C terminal A6J62_03230 PF02702 Osmosensitive K+ channel His kinase sensor domain A6J62_03230 PF00512 His Kinase A (phospho-acceptor) domain A6J62_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_03230 PF13493 Domain of unknown function (DUF4118) A6J62_03235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A6J62_03235 PF10371 Domain of unknown function A6J62_03235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J62_03235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A6J62_03235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A6J62_03240 PF02705 K+ potassium transporter A6J62_03245 PF01926 50S ribosome-binding GTPase A6J62_03250 PF02492 CobW/HypB/UreG, nucleotide-binding domain A6J62_03250 PF07683 Cobalamin synthesis protein cobW C-terminal domain A6J62_03255 PF00654 Voltage gated chloride channel A6J62_03265 PF00155 Aminotransferase class I and II A6J62_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_03275 PF00072 Response regulator receiver domain A6J62_03280 PF13476 AAA domain A6J62_03285 PF12320 Type 5 capsule protein repressor C-terminal domain A6J62_03285 PF00149 Calcineurin-like phosphoesterase A6J62_03290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J62_03290 PF00356 Bacterial regulatory proteins, lacI family A6J62_03295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J62_03295 PF00381 PTS HPr component phosphorylation site A6J62_03300 PF00294 pfkB family carbohydrate kinase A6J62_03305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J62_03305 PF02378 Phosphotransferase system, EIIC A6J62_03310 PF08443 RimK-like ATP-grasp domain A6J62_03310 PF18030 RimK PreATP-grasp domain A6J62_03315 PF00155 Aminotransferase class I and II A6J62_03325 PF13597 Anaerobic ribonucleoside-triphosphate reductase A6J62_03325 PF03477 ATP cone domain A6J62_03345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_03400 PF01797 Transposase IS200 like A6J62_03415 PF07859 alpha/beta hydrolase fold A6J62_03480 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A6J62_03490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_03505 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_03510 PF01609 Transposase DDE domain A6J62_03510 PF05598 Transposase domain (DUF772) A6J62_03525 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA A6J62_03530 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system A6J62_03575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_03635 PF12833 Helix-turn-helix domain A6J62_03635 PF01965 DJ-1/PfpI family A6J62_03675 PF01555 DNA methylase A6J62_03690 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A6J62_03695 PF08212 Lipocalin-like domain A6J62_03715 PF17676 LD-carboxypeptidase C-terminal domain A6J62_03715 PF02016 LD-carboxypeptidase N-terminal domain A6J62_03810 PF02567 Phenazine biosynthesis-like protein A6J62_03835 PF13302 Acetyltransferase (GNAT) domain A6J62_03895 PF08212 Lipocalin-like domain A6J62_03930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_03960 PF02567 Phenazine biosynthesis-like protein A6J62_03980 PF01381 Helix-turn-helix A6J62_03985 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB A6J62_04145 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH A6J62_04185 PF01810 LysE type translocator A6J62_04195 PF04229 GrpB protein A6J62_04215 PF08212 Lipocalin-like domain A6J62_04235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_04270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_04295 PF02016 LD-carboxypeptidase N-terminal domain A6J62_04295 PF17676 LD-carboxypeptidase C-terminal domain A6J62_04370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_04390 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ A6J62_04415 PF08212 Lipocalin-like domain A6J62_04420 PF13302 Acetyltransferase (GNAT) domain A6J62_04440 PF00293 NUDIX domain A6J62_04465 PF13286 Phosphohydrolase-associated domain A6J62_04465 PF01966 HD domain A6J62_04510 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_04575 PF13495 Phage integrase, N-terminal SAM-like domain A6J62_04575 PF00589 Phage integrase family A6J62_04580 PF00453 Ribosomal protein L20 A6J62_04585 PF01632 Ribosomal protein L35 A6J62_04590 PF05198 Translation initiation factor IF-3, N-terminal domain A6J62_04590 PF00707 Translation initiation factor IF-3, C-terminal domain A6J62_04595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6J62_04595 PF03129 Anticodon binding domain A6J62_04595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6J62_04595 PF02824 TGS domain A6J62_04620 PF01609 Transposase DDE domain A6J62_04620 PF05598 Transposase domain (DUF772) A6J62_04630 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6J62_04630 PF01571 Aminomethyltransferase folate-binding domain A6J62_04640 PF00464 Serine hydroxymethyltransferase A6J62_04645 PF01597 Glycine cleavage H-protein A6J62_04650 PF02347 Glycine cleavage system P-protein A6J62_04660 PF01797 Transposase IS200 like A6J62_04665 PF00194 Eukaryotic-type carbonic anhydrase A6J62_04680 PF00768 D-alanyl-D-alanine carboxypeptidase A6J62_04680 PF07943 Penicillin-binding protein 5, C-terminal domain A6J62_04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_04690 PF02743 Cache domain A6J62_04690 PF00672 HAMP domain A6J62_04695 PF07690 Major Facilitator Superfamily A6J62_04735 PF00672 HAMP domain A6J62_04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_04735 PF00512 His Kinase A (phospho-acceptor) domain A6J62_04735 PF13426 PAS domain A6J62_04735 PF14827 Double sensory domain of two-component sensor kinase A6J62_04740 PF00072 Response regulator receiver domain A6J62_04740 PF00486 Transcriptional regulatory protein, C terminal A6J62_04760 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_04765 PF00128 Alpha amylase, catalytic domain A6J62_04770 PF01292 Prokaryotic cytochrome b561 A6J62_04780 PF00455 DeoR C terminal sensor domain A6J62_04780 PF08220 DeoR-like helix-turn-helix domain A6J62_04785 PF03611 PTS system sugar-specific permease component A6J62_04790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J62_04795 PF00596 Class II Aldolase and Adducin N-terminal domain A6J62_04805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A6J62_04810 PF01261 Xylose isomerase-like TIM barrel A6J62_04820 PF00072 Response regulator receiver domain A6J62_04820 PF00486 Transcriptional regulatory protein, C terminal A6J62_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_04825 PF00672 HAMP domain A6J62_04825 PF00512 His Kinase A (phospho-acceptor) domain A6J62_04840 PF00871 Acetokinase family A6J62_04850 PF07715 TonB-dependent Receptor Plug Domain A6J62_04850 PF00593 TonB dependent receptor A6J62_04855 PF12833 Helix-turn-helix domain A6J62_04860 PF00005 ABC transporter A6J62_04865 PF01032 FecCD transport family A6J62_04870 PF01032 FecCD transport family A6J62_04890 PF00801 PKD domain A6J62_04890 PF05547 Immune inhibitor A peptidase M6 A6J62_04895 PF03280 Proteobacterial lipase chaperone protein A6J62_04900 PF00561 alpha/beta hydrolase fold A6J62_04905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_04905 PF00672 HAMP domain A6J62_04905 PF12729 Four helix bundle sensory module for signal transduction A6J62_04910 PF16458 Beta-prism lectin A6J62_04910 PF12563 Hemolytic toxin N terminal A6J62_04910 PF07968 Leukocidin/Hemolysin toxin family A6J62_04915 PF00657 GDSL-like Lipase/Acylhydrolase A6J62_04920 PF00990 Diguanylate cyclase, GGDEF domain A6J62_04920 PF08448 PAS fold A6J62_04930 PF07690 Major Facilitator Superfamily A6J62_04935 PF03553 Na+/H+ antiporter family A6J62_04945 PF00512 His Kinase A (phospho-acceptor) domain A6J62_04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_04945 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_04950 PF11849 Domain of unknown function (DUF3369) A6J62_04960 PF01467 Cytidylyltransferase-like A6J62_04965 PF02540 NAD synthase A6J62_04970 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6J62_04975 PF00270 DEAD/DEAH box helicase A6J62_04975 PF00271 Helicase conserved C-terminal domain A6J62_04990 PF01797 Transposase IS200 like A6J62_05010 PF00145 C-5 cytosine-specific DNA methylase A6J62_05015 PF00478 IMP dehydrogenase / GMP reductase domain A6J62_05030 PF07885 Ion channel A6J62_05040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J62_05040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J62_05045 PF01256 Carbohydrate kinase A6J62_05045 PF03853 YjeF-related protein N-terminus A6J62_05055 PF00072 Response regulator receiver domain A6J62_05070 PF03889 Alternative ribosome-rescue factor A A6J62_05075 PF00313 'Cold-shock' DNA-binding domain A6J62_05080 PF00970 Oxidoreductase FAD-binding domain A6J62_05080 PF00042 Globin A6J62_05080 PF00175 Oxidoreductase NAD-binding domain A6J62_05085 PF00158 Sigma-54 interaction domain A6J62_05085 PF01590 GAF domain A6J62_05095 PF01546 Peptidase family M20/M25/M40 A6J62_05095 PF07687 Peptidase dimerisation domain A6J62_05100 PF07662 Na+ dependent nucleoside transporter C-terminus A6J62_05100 PF07670 Nucleoside recognition A6J62_05100 PF01773 Na+ dependent nucleoside transporter N-terminus A6J62_05115 PF00672 HAMP domain A6J62_05115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_05115 PF02743 Cache domain A6J62_05120 PF17863 AAA lid domain A6J62_05120 PF07726 ATPase family associated with various cellular activities (AAA) A6J62_05125 PF01882 Protein of unknown function DUF58 A6J62_05140 PF07584 Aerotolerance regulator N-terminal A6J62_05140 PF13519 von Willebrand factor type A domain A6J62_05155 PF00313 'Cold-shock' DNA-binding domain A6J62_05160 PF00563 EAL domain A6J62_05160 PF00990 Diguanylate cyclase, GGDEF domain A6J62_05160 PF08448 PAS fold A6J62_05170 PF12843 Putative quorum-sensing-regulated virulence factor A6J62_05180 PF01212 Beta-eliminating lyase A6J62_05185 PF03222 Tryptophan/tyrosine permease family A6J62_05190 PF00582 Universal stress protein family A6J62_05200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A6J62_05200 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter A6J62_05200 PF00361 Proton-conducting membrane transporter A6J62_05200 PF13244 Domain of unknown function (DUF4040) A6J62_05220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A6J62_05225 PF03334 Na+/H+ antiporter subunit A6J62_05235 PF01327 Polypeptide deformylase A6J62_05240 PF12561 ToxR activated gene A lipoprotein domain A6J62_05240 PF00041 Fibronectin type III domain A6J62_05245 PF01266 FAD dependent oxidoreductase A6J62_05265 PF00158 Sigma-54 interaction domain A6J62_05265 PF00072 Response regulator receiver domain A6J62_05265 PF02954 Bacterial regulatory protein, Fis family A6J62_05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_05270 PF00512 His Kinase A (phospho-acceptor) domain A6J62_05270 PF02743 Cache domain A6J62_05285 PF07690 Major Facilitator Superfamily A6J62_05290 PF03009 Glycerophosphoryl diester phosphodiesterase family A6J62_05300 PF01048 Phosphorylase superfamily A6J62_05305 PF04973 Nicotinamide mononucleotide transporter A6J62_05310 PF04973 Nicotinamide mononucleotide transporter A6J62_05315 PF00356 Bacterial regulatory proteins, lacI family A6J62_05320 PF00294 pfkB family carbohydrate kinase A6J62_05325 PF13407 Periplasmic binding protein domain A6J62_05330 PF02653 Branched-chain amino acid transport system / permease component A6J62_05335 PF00005 ABC transporter A6J62_05340 PF05025 RbsD / FucU transport protein family A6J62_05355 PF04717 Type VI secretion system, phage-baseplate injector A6J62_05355 PF16671 Actin cross-linking domain A6J62_05390 PF17871 AAA lid domain A6J62_05390 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_05390 PF07724 AAA domain (Cdc48 subfamily) A6J62_05390 PF10431 C-terminal, D2-small domain, of ClpB protein A6J62_05450 PF00849 RNA pseudouridylate synthase A6J62_05460 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_05460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6J62_05465 PF04898 Glutamate synthase central domain A6J62_05465 PF01493 GXGXG motif A6J62_05465 PF01645 Conserved region in glutamate synthase A6J62_05465 PF00310 Glutamine amidotransferases class-II A6J62_05470 PF16199 Radical_SAM C-terminal domain A6J62_05470 PF04055 Radical SAM superfamily A6J62_05475 PF00360 Phytochrome region A6J62_05475 PF00990 Diguanylate cyclase, GGDEF domain A6J62_05475 PF01590 GAF domain A6J62_05475 PF00563 EAL domain A6J62_05480 PF18415 Histidine kinase receptor ArcB trans-membrane domain A6J62_05480 PF00512 His Kinase A (phospho-acceptor) domain A6J62_05480 PF01627 Hpt domain A6J62_05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_05480 PF00989 PAS fold A6J62_05480 PF00072 Response regulator receiver domain A6J62_05485 PF00486 Transcriptional regulatory protein, C terminal A6J62_05485 PF00072 Response regulator receiver domain A6J62_05495 PF03737 Aldolase/RraA A6J62_05510 PF03447 Homoserine dehydrogenase, NAD binding domain A6J62_05510 PF00742 Homoserine dehydrogenase A6J62_05510 PF13840 ACT domain A6J62_05510 PF01842 ACT domain A6J62_05510 PF00696 Amino acid kinase family A6J62_05515 PF00288 GHMP kinases N terminal domain A6J62_05515 PF08544 GHMP kinases C terminal A6J62_05520 PF14821 Threonine synthase N terminus A6J62_05520 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_05525 PF01228 Glycine radical A6J62_05530 PF01261 Xylose isomerase-like TIM barrel A6J62_05535 PF03167 Uracil DNA glycosylase superfamily A6J62_05550 PF01235 Sodium:alanine symporter family A6J62_05555 PF03883 Peroxide stress protein YaaA A6J62_05560 PF01026 TatD related DNase A6J62_05565 PF07662 Na+ dependent nucleoside transporter C-terminus A6J62_05565 PF01773 Na+ dependent nucleoside transporter N-terminus A6J62_05565 PF07670 Nucleoside recognition A6J62_05575 PF01791 DeoC/LacD family aldolase A6J62_05580 PF00591 Glycosyl transferase family, a/b domain A6J62_05580 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A6J62_05580 PF02885 Glycosyl transferase family, helical bundle domain A6J62_05585 PF01676 Metalloenzyme superfamily A6J62_05590 PF01048 Phosphorylase superfamily A6J62_05600 PF18429 Domain of unknown function (DUF5609) A6J62_05615 PF18073 Rubredoxin metal binding domain A6J62_05620 PF03764 Elongation factor G, domain IV A6J62_05620 PF00009 Elongation factor Tu GTP binding domain A6J62_05620 PF03144 Elongation factor Tu domain 2 A6J62_05620 PF14492 Elongation Factor G, domain II A6J62_05620 PF00679 Elongation factor G C-terminus A6J62_05625 PF00501 AMP-binding enzyme A6J62_05630 PF00072 Response regulator receiver domain A6J62_05640 PF02837 Glycosyl hydrolases family 2, sugar binding domain A6J62_05640 PF16353 Domain of unknown function(DUF4981) A6J62_05640 PF02929 Beta galactosidase small chain A6J62_05640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A6J62_05640 PF00703 Glycosyl hydrolases family 2 A6J62_05645 PF00356 Bacterial regulatory proteins, lacI family A6J62_05650 PF01588 Putative tRNA binding domain A6J62_05660 PF01544 CorA-like Mg2+ transporter protein A6J62_05665 PF08443 RimK-like ATP-grasp domain A6J62_05665 PF18030 RimK PreATP-grasp domain A6J62_05665 PF02080 TrkA-C domain A6J62_05670 PF00583 Acetyltransferase (GNAT) family A6J62_05680 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle A6J62_05680 PF14602 Hexapeptide repeat of succinyl-transferase A6J62_05685 PF07130 YebG protein A6J62_05700 PF17946 RecC C-terminal domain A6J62_05705 PF12705 PD-(D/E)XK nuclease superfamily A6J62_05705 PF00580 UvrD/REP helicase N-terminal domain A6J62_05705 PF13361 UvrD-like helicase C-terminal domain A6J62_05710 PF13538 UvrD-like helicase C-terminal domain A6J62_05720 PF00583 Acetyltransferase (GNAT) family A6J62_05720 PF00696 Amino acid kinase family A6J62_05730 PF03562 MltA specific insert domain A6J62_05730 PF06725 3D domain A6J62_05735 PF00899 ThiF family A6J62_05740 PF02657 Fe-S metabolism associated domain A6J62_05745 PF00266 Aminotransferase class-V A6J62_05750 PF01965 DJ-1/PfpI family A6J62_05755 PF02558 Ketopantoate reductase PanE/ApbA A6J62_05755 PF08546 Ketopantoate reductase PanE/ApbA C terminal A6J62_05760 PF03502 Nucleoside-specific channel-forming protein, Tsx A6J62_05770 PF04542 Sigma-70 region 2 A6J62_05770 PF04545 Sigma-70, region 4 A6J62_05780 PF07690 Major Facilitator Superfamily A6J62_05790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6J62_05800 PF05175 Methyltransferase small domain A6J62_05805 PF01722 BolA-like protein A6J62_05810 PF11973 NQRA C-terminal domain A6J62_05810 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) A6J62_05815 PF03116 NQR2, RnfD, RnfE family A6J62_05820 PF04205 FMN-binding domain A6J62_05825 PF02508 Rnf-Nqr subunit, membrane protein A6J62_05830 PF02508 Rnf-Nqr subunit, membrane protein A6J62_05835 PF00175 Oxidoreductase NAD-binding domain A6J62_05835 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J62_05835 PF00970 Oxidoreductase FAD-binding domain A6J62_05840 PF02424 ApbE family A6J62_05850 PF00817 impB/mucB/samB family A6J62_05850 PF11798 IMS family HHH motif A6J62_05860 PF17158 Membrane-associated sensor, integral membrane domain A6J62_05860 PF00990 Diguanylate cyclase, GGDEF domain A6J62_05865 PF00209 Sodium:neurotransmitter symporter family A6J62_05875 PF08443 RimK-like ATP-grasp domain A6J62_05875 PF18030 RimK PreATP-grasp domain A6J62_05880 PF18030 RimK PreATP-grasp domain A6J62_05880 PF08443 RimK-like ATP-grasp domain A6J62_05885 PF07687 Peptidase dimerisation domain A6J62_05885 PF01546 Peptidase family M20/M25/M40 A6J62_05890 PF00860 Permease family A6J62_05895 PF00156 Phosphoribosyl transferase domain A6J62_05905 PF07417 Sigma factor-binding transcriptional regulator Crl A6J62_05910 PF00696 Amino acid kinase family A6J62_05910 PF01472 PUA domain A6J62_05915 PF00171 Aldehyde dehydrogenase family A6J62_05920 PF03477 ATP cone domain A6J62_05925 PF01872 RibD C-terminal domain A6J62_05925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J62_05930 PF00677 Lumazine binding domain A6J62_05935 PF00925 GTP cyclohydrolase II A6J62_05935 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6J62_05940 PF00885 6,7-dimethyl-8-ribityllumazine synthase A6J62_05945 PF01029 NusB family A6J62_05950 PF00586 AIR synthase related protein, N-terminal domain A6J62_05950 PF02769 AIR synthase related protein, C-terminal domain A6J62_05955 PF04608 Phosphatidylglycerophosphatase A A6J62_05960 PF11944 Protein of unknown function (DUF3461) A6J62_05970 PF08335 GlnD PII-uridylyltransferase A6J62_05970 PF01966 HD domain A6J62_05970 PF01909 Nucleotidyltransferase domain A6J62_05975 PF00557 Metallopeptidase family M24 A6J62_05980 PF00318 Ribosomal protein S2 A6J62_05985 PF00889 Elongation factor TS A6J62_05990 PF00696 Amino acid kinase family A6J62_05995 PF01765 Ribosome recycling factor A6J62_06000 PF01255 Putative undecaprenyl diphosphate synthase A6J62_06010 PF13288 DXP reductoisomerase C-terminal domain A6J62_06010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A6J62_06010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A6J62_06015 PF02163 Peptidase family M50 A6J62_06015 PF17820 PDZ domain A6J62_06020 PF07244 Surface antigen variable number repeat A6J62_06020 PF01103 Surface antigen A6J62_06025 PF03938 Outer membrane protein (OmpH-like) A6J62_06030 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A6J62_06030 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_06035 PF07977 FabA-like domain A6J62_06040 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A6J62_06040 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_06045 PF02684 Lipid-A-disaccharide synthetase A6J62_06050 PF01351 Ribonuclease HII A6J62_06055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6J62_06055 PF01336 OB-fold nucleic acid binding domain A6J62_06055 PF02811 PHP domain A6J62_06055 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6J62_06055 PF14579 Helix-hairpin-helix motif A6J62_06060 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A6J62_06065 PF09179 TilS substrate binding domain A6J62_06065 PF11734 TilS substrate C-terminal domain A6J62_06065 PF01171 PP-loop family A6J62_06070 PF00034 Cytochrome c A6J62_06075 PF05870 Phenolic acid decarboxylase (PAD) A6J62_06080 PF00543 Nitrogen regulatory protein P-II A6J62_06085 PF03372 Endonuclease/Exonuclease/phosphatase family A6J62_06090 PF01464 Transglycosylase SLT domain A6J62_06090 PF01476 LysM domain A6J62_06095 PF16123 Hydroxyacylglutathione hydrolase C-terminus A6J62_06095 PF00753 Metallo-beta-lactamase superfamily A6J62_06100 PF08241 Methyltransferase domain A6J62_06105 PF00075 RNase H A6J62_06110 PF00929 Exonuclease A6J62_06120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J62_06120 PF02770 Acyl-CoA dehydrogenase, middle domain A6J62_06120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J62_06120 PF09317 Domain of unknown function (DUF1974) A6J62_06125 PF13580 SIS domain A6J62_06130 PF13230 Glutamine amidotransferases class-II A6J62_06135 PF00551 Formyl transferase A6J62_06140 PF02769 AIR synthase related protein, C-terminal domain A6J62_06140 PF00586 AIR synthase related protein, N-terminal domain A6J62_06150 PF08448 PAS fold A6J62_06150 PF00990 Diguanylate cyclase, GGDEF domain A6J62_06155 PF01479 S4 domain A6J62_06155 PF00849 RNA pseudouridylate synthase A6J62_06160 PF01713 Smr domain A6J62_06175 PF01963 TraB family A6J62_06180 PF02838 Glycosyl hydrolase family 20, domain 2 A6J62_06180 PF00728 Glycosyl hydrolase family 20, catalytic domain A6J62_06180 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain A6J62_06180 PF03173 Putative carbohydrate binding domain A6J62_06190 PF00403 Heavy-metal-associated domain A6J62_06195 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6J62_06200 PF01389 OmpA-like transmembrane domain A6J62_06200 PF00691 OmpA family A6J62_06210 PF07715 TonB-dependent Receptor Plug Domain A6J62_06215 PF08021 Siderophore-interacting FAD-binding domain A6J62_06215 PF04954 Siderophore-interacting protein A6J62_06220 PF00550 Phosphopantetheine attachment site A6J62_06220 PF00668 Condensation domain A6J62_06220 PF00501 AMP-binding enzyme A6J62_06220 PF08242 Methyltransferase domain A6J62_06255 PF00072 Response regulator receiver domain A6J62_06255 PF01584 CheW-like domain A6J62_06260 PF03705 CheR methyltransferase, all-alpha domain A6J62_06260 PF01739 CheR methyltransferase, SAM binding domain A6J62_06265 PF00460 Flagella basal body rod protein A6J62_06270 PF00460 Flagella basal body rod protein A6J62_06270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J62_06275 PF03963 Flagellar hook capping protein - N-terminal region A6J62_06275 PF13860 FlgD Ig-like domain A6J62_06275 PF13861 FlgD Tudor-like domain A6J62_06280 PF07559 Flagellar basal body protein FlaE A6J62_06280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J62_06280 PF00460 Flagella basal body rod protein A6J62_06285 PF00460 Flagella basal body rod protein A6J62_06285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J62_06290 PF00460 Flagella basal body rod protein A6J62_06290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J62_06295 PF02107 Flagellar L-ring protein A6J62_06300 PF02119 Flagellar P-ring protein A6J62_06305 PF10135 Rod binding protein A6J62_06305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A6J62_06310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6J62_06310 PF07196 Flagellin hook IN motif A6J62_06320 PF00669 Bacterial flagellin N-terminal helical region A6J62_06320 PF07196 Flagellin hook IN motif A6J62_06320 PF00700 Bacterial flagellin C-terminal helical region A6J62_06325 PF07196 Flagellin hook IN motif A6J62_06325 PF00669 Bacterial flagellin N-terminal helical region A6J62_06325 PF00700 Bacterial flagellin C-terminal helical region A6J62_06410 PF06071 Protein of unknown function (DUF933) A6J62_06410 PF01926 50S ribosome-binding GTPase A6J62_06415 PF01195 Peptidyl-tRNA hydrolase A6J62_06420 PF14572 Phosphoribosyl synthetase-associated domain A6J62_06420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A6J62_06425 PF00288 GHMP kinases N terminal domain A6J62_06425 PF08544 GHMP kinases C terminal A6J62_06430 PF03550 Outer membrane lipoprotein LolB A6J62_06435 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A6J62_06435 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A6J62_06435 PF01488 Shikimate / quinate 5-dehydrogenase A6J62_06440 PF03462 PCRF domain A6J62_06440 PF00472 RF-1 domain A6J62_06445 PF13847 Methyltransferase domain A6J62_06445 PF17827 PrmC N-terminal domain A6J62_06450 PF04247 Invasion gene expression up-regulator, SirB A6J62_06455 PF13369 Transglutaminase-like superfamily A6J62_06460 PF00793 DAHP synthetase I family A6J62_06465 PF00149 Calcineurin-like phosphoesterase A6J62_06465 PF02872 5'-nucleotidase, C-terminal domain A6J62_06470 PF04073 Aminoacyl-tRNA editing domain A6J62_06475 PF00860 Permease family A6J62_06490 PF03358 NADPH-dependent FMN reductase A6J62_06495 PF03960 ArsC family A6J62_06500 PF13181 Tetratricopeptide repeat A6J62_06500 PF01435 Peptidase family M48 A6J62_06510 PF01594 AI-2E family transporter A6J62_06515 PF00672 HAMP domain A6J62_06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_06515 PF02743 Cache domain A6J62_06520 PF00578 AhpC/TSA family A6J62_06530 PF00701 Dihydrodipicolinate synthetase family A6J62_06535 PF06804 NlpB/DapX lipoprotein A6J62_06545 PF02557 D-alanyl-D-alanine carboxypeptidase A6J62_06550 PF07687 Peptidase dimerisation domain A6J62_06550 PF01546 Peptidase family M20/M25/M40 A6J62_06555 PF03960 ArsC family A6J62_06570 PF11143 Protein of unknown function (DUF2919) A6J62_06575 PF04261 Dyp-type peroxidase family A6J62_06580 PF07196 Flagellin hook IN motif A6J62_06580 PF00700 Bacterial flagellin C-terminal helical region A6J62_06580 PF00669 Bacterial flagellin N-terminal helical region A6J62_06585 PF00669 Bacterial flagellin N-terminal helical region A6J62_06585 PF07196 Flagellin hook IN motif A6J62_06585 PF00700 Bacterial flagellin C-terminal helical region A6J62_06590 PF00700 Bacterial flagellin C-terminal helical region A6J62_06590 PF07196 Flagellin hook IN motif A6J62_06590 PF00669 Bacterial flagellin N-terminal helical region A6J62_06595 PF03646 FlaG protein A6J62_06600 PF02465 Flagellar hook-associated protein 2 N-terminus A6J62_06600 PF07196 Flagellin hook IN motif A6J62_06600 PF07195 Flagellar hook-associated protein 2 C-terminus A6J62_06610 PF02561 Flagellar protein FliS A6J62_06615 PF00072 Response regulator receiver domain A6J62_06615 PF00158 Sigma-54 interaction domain A6J62_06615 PF02954 Bacterial regulatory protein, Fis family A6J62_06620 PF13493 Domain of unknown function (DUF4118) A6J62_06620 PF13426 PAS domain A6J62_06620 PF08447 PAS fold A6J62_06620 PF00512 His Kinase A (phospho-acceptor) domain A6J62_06620 PF00989 PAS fold A6J62_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_06625 PF02954 Bacterial regulatory protein, Fis family A6J62_06625 PF00072 Response regulator receiver domain A6J62_06625 PF00158 Sigma-54 interaction domain A6J62_06630 PF02049 Flagellar hook-basal body complex protein FliE A6J62_06635 PF01514 Secretory protein of YscJ/FliF family A6J62_06635 PF08345 Flagellar M-ring protein C-terminal A6J62_06640 PF01706 FliG C-terminal domain A6J62_06640 PF14841 FliG middle domain A6J62_06640 PF14842 FliG N-terminal domain A6J62_06645 PF02108 Flagellar assembly protein FliH A6J62_06650 PF18269 T3SS EscN ATPase C-terminal domain A6J62_06650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J62_06670 PF03748 Flagellar basal body-associated protein FliL A6J62_06675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6J62_06675 PF02154 Flagellar motor switch protein FliM A6J62_06680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6J62_06685 PF04347 Flagellar biosynthesis protein, FliO A6J62_06690 PF00813 FliP family A6J62_06695 PF01313 Bacterial export proteins, family 3 A6J62_06700 PF01311 Bacterial export proteins, family 1 A6J62_06705 PF01312 FlhB HrpN YscU SpaS Family A6J62_06710 PF01713 Smr domain A6J62_06715 PF05175 Methyltransferase small domain A6J62_06725 PF01264 Chorismate synthase A6J62_06730 PF03458 UPF0126 domain A6J62_06735 PF04315 Elongation factor P hydroxylase A6J62_06740 PF08891 YfcL protein A6J62_06745 PF03358 NADPH-dependent FMN reductase A6J62_06750 PF01266 FAD dependent oxidoreductase A6J62_06750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A6J62_06755 PF00109 Beta-ketoacyl synthase, N-terminal domain A6J62_06755 PF02801 Beta-ketoacyl synthase, C-terminal domain A6J62_06760 PF11890 Domain of unknown function (DUF3410) A6J62_06760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J62_06760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J62_06765 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6J62_06765 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6J62_06770 PF01475 Ferric uptake regulator family A6J62_06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_06780 PF03466 LysR substrate binding domain A6J62_06785 PF03788 LrgA family A6J62_06790 PF04172 LrgB-like family A6J62_06795 PF00258 Flavodoxin A6J62_06805 PF12697 Alpha/beta hydrolase family A6J62_06810 PF17206 SeqA protein N-terminal domain A6J62_06810 PF03925 SeqA protein C-terminal domain A6J62_06815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J62_06815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J62_06815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J62_06815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J62_06825 PF01784 NIF3 (NGG1p interacting factor 3) A6J62_06830 PF00285 Citrate synthase, C-terminal domain A6J62_06835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6J62_06840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6J62_06845 PF00890 FAD binding domain A6J62_06845 PF02910 Fumarate reductase flavoprotein C-term A6J62_06850 PF13085 2Fe-2S iron-sulfur cluster binding domain A6J62_06855 PF16078 2-oxoglutarate dehydrogenase N-terminus A6J62_06855 PF02779 Transketolase, pyrimidine binding domain A6J62_06855 PF16870 2-oxoglutarate dehydrogenase C-terminal A6J62_06855 PF00676 Dehydrogenase E1 component A6J62_06860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6J62_06860 PF02817 e3 binding domain A6J62_06860 PF00364 Biotin-requiring enzyme A6J62_06865 PF08442 ATP-grasp domain A6J62_06865 PF00549 CoA-ligase A6J62_06870 PF02629 CoA binding domain A6J62_06870 PF00549 CoA-ligase A6J62_06875 PF00950 ABC 3 transport family A6J62_06880 PF00005 ABC transporter A6J62_06885 PF01297 Zinc-uptake complex component A periplasmic A6J62_06890 PF02311 AraC-like ligand binding domain A6J62_06890 PF12833 Helix-turn-helix domain A6J62_06895 PF04023 FeoA domain A6J62_06900 PF02421 Ferrous iron transport protein B A6J62_06900 PF07670 Nucleoside recognition A6J62_06900 PF07664 Ferrous iron transport protein B C terminus A6J62_06915 PF00750 tRNA synthetases class I (R) A6J62_06915 PF03485 Arginyl tRNA synthetase N terminal domain A6J62_06915 PF05746 DALR anticodon binding domain A6J62_06925 PF05193 Peptidase M16 inactive domain A6J62_06925 PF00675 Insulinase (Peptidase family M16) A6J62_06930 PF00300 Histidine phosphatase superfamily (branch 1) A6J62_06935 PF00771 FHIPEP family A6J62_06940 PF00448 SRP54-type protein, GTPase domain A6J62_06945 PF10609 NUBPL iron-transfer P-loop NTPase A6J62_06950 PF04539 Sigma-70 region 3 A6J62_06950 PF04545 Sigma-70, region 4 A6J62_06950 PF04542 Sigma-70 region 2 A6J62_06955 PF00072 Response regulator receiver domain A6J62_06960 PF04344 Chemotaxis phosphatase, CheZ A6J62_06965 PF01627 Hpt domain A6J62_06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_06965 PF02895 Signal transducing histidine kinase, homodimeric domain A6J62_06965 PF07194 P2 response regulator binding domain A6J62_06965 PF01584 CheW-like domain A6J62_06970 PF01339 CheB methylesterase A6J62_06970 PF00072 Response regulator receiver domain A6J62_06975 PF13614 AAA domain A6J62_06985 PF01584 CheW-like domain A6J62_06995 PF00005 ABC transporter A6J62_07000 PF03379 CcmB protein A6J62_07005 PF01578 Cytochrome C assembly protein A6J62_07010 PF04995 Heme exporter protein D (CcmD) A6J62_07015 PF03100 CcmE A6J62_07020 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6J62_07020 PF01578 Cytochrome C assembly protein A6J62_07025 PF08534 Redoxin A6J62_07030 PF03918 Cytochrome C biogenesis protein A6J62_07040 PF04333 MlaA lipoprotein A6J62_07055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6J62_07055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6J62_07060 PF00462 Glutaredoxin A6J62_07065 PF01751 Toprim domain A6J62_07065 PF01131 DNA topoisomerase A6J62_07070 PF00850 Histone deacetylase domain A6J62_07085 PF00884 Sulfatase A6J62_07085 PF11893 Domain of unknown function (DUF3413) A6J62_07090 PF07208 Protein of unknown function (DUF1414) A6J62_07095 PF04245 37-kD nucleoid-associated bacterial protein A6J62_07105 PF03553 Na+/H+ antiporter family A6J62_07110 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6J62_07110 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6J62_07115 PF01914 MarC family integral membrane protein A6J62_07120 PF00465 Iron-containing alcohol dehydrogenase A6J62_07120 PF00171 Aldehyde dehydrogenase family A6J62_07135 PF00916 Sulfate permease family A6J62_07135 PF01740 STAS domain A6J62_07140 PF12111 Polyribonucleotide phosphorylase C terminal A6J62_07140 PF10150 Ribonuclease E/G family A6J62_07140 PF00575 S1 RNA binding domain A6J62_07155 PF00849 RNA pseudouridylate synthase A6J62_07155 PF01479 S4 domain A6J62_07160 PF02545 Maf-like protein A6J62_07165 PF02620 Large ribosomal RNA subunit accumulation protein YceD A6J62_07170 PF01783 Ribosomal L32p protein family A6J62_07175 PF02504 Fatty acid synthesis protein A6J62_07180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6J62_07180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6J62_07185 PF00698 Acyl transferase domain A6J62_07195 PF00550 Phosphopantetheine attachment site A6J62_07200 PF00109 Beta-ketoacyl synthase, N-terminal domain A6J62_07200 PF02801 Beta-ketoacyl synthase, C-terminal domain A6J62_07205 PF01063 Amino-transferase class IV A6J62_07210 PF02618 YceG-like family A6J62_07215 PF02223 Thymidylate kinase A6J62_07220 PF09115 DNA polymerase III, delta subunit, C terminal A6J62_07225 PF01026 TatD related DNase A6J62_07230 PF00367 phosphotransferase system, EIIB A6J62_07230 PF02378 Phosphotransferase system, EIIC A6J62_07235 PF00209 Sodium:neurotransmitter symporter family A6J62_07245 PF01734 Patatin-like phospholipase A6J62_07250 PF00224 Pyruvate kinase, barrel domain A6J62_07250 PF02887 Pyruvate kinase, alpha/beta domain A6J62_07255 PF00480 ROK family A6J62_07260 PF01584 CheW-like domain A6J62_07260 PF00072 Response regulator receiver domain A6J62_07275 PF13847 Methyltransferase domain A6J62_07295 PF01263 Aldose 1-epimerase A6J62_07300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J62_07300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J62_07305 PF01641 SelR domain A6J62_07315 PF07023 Protein of unknown function (DUF1315) A6J62_07320 PF00710 Asparaginase, N-terminal A6J62_07320 PF17763 Glutaminase/Asparaginase C-terminal domain A6J62_07325 PF01343 Peptidase family S49 A6J62_07330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6J62_07330 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_07335 PF00551 Formyl transferase A6J62_07335 PF01842 ACT domain A6J62_07345 PF13307 Helicase C-terminal domain A6J62_07345 PF04851 Type III restriction enzyme, res subunit A6J62_07350 PF00814 Glycoprotease family A6J62_07365 PF00561 alpha/beta hydrolase fold A6J62_07370 PF13193 AMP-binding enzyme C-terminal domain A6J62_07370 PF00501 AMP-binding enzyme A6J62_07375 PF00570 HRDC domain A6J62_07375 PF01612 3'-5' exonuclease A6J62_07395 PF01966 HD domain A6J62_07395 PF13286 Phosphohydrolase-associated domain A6J62_07405 PF00155 Aminotransferase class I and II A6J62_07410 PF00425 chorismate binding enzyme A6J62_07415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J62_07415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J62_07415 PF16582 Middle domain of thiamine pyrophosphate A6J62_07420 PF12697 Alpha/beta hydrolase family A6J62_07425 PF00378 Enoyl-CoA hydratase/isomerase A6J62_07430 PF13378 Enolase C-terminal domain-like A6J62_07435 PF13193 AMP-binding enzyme C-terminal domain A6J62_07435 PF00501 AMP-binding enzyme A6J62_07440 PF03594 Benzoate membrane transport protein A6J62_07445 PF07883 Cupin domain A6J62_07445 PF01381 Helix-turn-helix A6J62_07450 PF12729 Four helix bundle sensory module for signal transduction A6J62_07450 PF00672 HAMP domain A6J62_07450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_07455 PF07690 Major Facilitator Superfamily A6J62_07475 PF04170 NlpE N-terminal domain A6J62_07480 PF03776 Septum formation topological specificity factor MinE A6J62_07485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A6J62_07490 PF03775 Septum formation inhibitor MinC, C-terminal domain A6J62_07490 PF05209 Septum formation inhibitor MinC, N-terminal domain A6J62_07495 PF05166 YcgL domain A6J62_07500 PF13406 Transglycosylase SLT domain A6J62_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_07505 PF03466 LysR substrate binding domain A6J62_07510 PF07670 Nucleoside recognition A6J62_07510 PF07662 Na+ dependent nucleoside transporter C-terminus A6J62_07510 PF01773 Na+ dependent nucleoside transporter N-terminus A6J62_07515 PF00704 Glycosyl hydrolases family 18 A6J62_07520 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J62_07525 PF00384 Molybdopterin oxidoreductase A6J62_07525 PF18364 Molybdopterin oxidoreductase N-terminal domain A6J62_07525 PF01568 Molydopterin dinucleotide binding domain A6J62_07540 PF03466 LysR substrate binding domain A6J62_07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_07545 PF01494 FAD binding domain A6J62_07550 PF02668 Taurine catabolism dioxygenase TauD, TfdA family A6J62_07555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A6J62_07555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A6J62_07605 PF13188 PAS domain A6J62_07605 PF03707 Bacterial signalling protein N terminal repeat A6J62_07605 PF00563 EAL domain A6J62_07605 PF00990 Diguanylate cyclase, GGDEF domain A6J62_07620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A6J62_07625 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J62_07630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A6J62_07635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6J62_07640 PF00072 Response regulator receiver domain A6J62_07640 PF00158 Sigma-54 interaction domain A6J62_07640 PF02954 Bacterial regulatory protein, Fis family A6J62_07645 PF02743 Cache domain A6J62_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_07645 PF00512 His Kinase A (phospho-acceptor) domain A6J62_07655 PF05698 Bacterial trigger factor protein (TF) C-terminus A6J62_07655 PF05697 Bacterial trigger factor protein (TF) A6J62_07655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J62_07660 PF00574 Clp protease A6J62_07665 PF10431 C-terminal, D2-small domain, of ClpB protein A6J62_07665 PF06689 ClpX C4-type zinc finger A6J62_07665 PF07724 AAA domain (Cdc48 subfamily) A6J62_07670 PF02190 ATP-dependent protease La (LON) substrate-binding domain A6J62_07670 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_07670 PF05362 Lon protease (S16) C-terminal proteolytic domain A6J62_07675 PF00216 Bacterial DNA-binding protein A6J62_07680 PF13145 PPIC-type PPIASE domain A6J62_07690 PF02224 Cytidylate kinase A6J62_07695 PF00575 S1 RNA binding domain A6J62_07700 PF00216 Bacterial DNA-binding protein A6J62_07705 PF06305 Lipopolysaccharide assembly protein A domain A6J62_07710 PF18073 Rubredoxin metal binding domain A6J62_07715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A6J62_07720 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A6J62_07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_07730 PF03466 LysR substrate binding domain A6J62_07740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6J62_07740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6J62_07745 PF01037 Lrp/AsnC ligand binding domain A6J62_07750 PF17854 FtsK alpha domain A6J62_07750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A6J62_07750 PF09397 Ftsk gamma domain A6J62_07750 PF01580 FtsK/SpoIIIE family A6J62_07755 PF02600 Disulfide bond formation protein DsbB A6J62_07760 PF06450 Bacterial Na+/H+ antiporter B (NhaB) A6J62_07765 PF00392 Bacterial regulatory proteins, gntR family A6J62_07765 PF07840 FadR C-terminal domain A6J62_07775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_07775 PF00672 HAMP domain A6J62_07780 PF01230 HIT domain A6J62_07795 PF13036 Peptidoglycan-synthase activator LpoB A6J62_07795 PF08139 Prokaryotic membrane lipoprotein lipid attachment site A6J62_07805 PF05728 Uncharacterised protein family (UPF0227) A6J62_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_07820 PF07968 Leukocidin/Hemolysin toxin family A6J62_07820 PF12563 Hemolytic toxin N terminal A6J62_07820 PF16458 Beta-prism lectin A6J62_07830 PF02559 CarD-like/TRCF domain A6J62_07830 PF00270 DEAD/DEAH box helicase A6J62_07830 PF03461 TRCF domain A6J62_07830 PF17757 UvrB interaction domain A6J62_07830 PF00271 Helicase conserved C-terminal domain A6J62_07840 PF02687 FtsX-like permease family A6J62_07840 PF12704 MacB-like periplasmic core domain A6J62_07845 PF00005 ABC transporter A6J62_07850 PF12704 MacB-like periplasmic core domain A6J62_07850 PF02687 FtsX-like permease family A6J62_07860 PF03772 Competence protein A6J62_07860 PF13567 Domain of unknown function (DUF4131) A6J62_07860 PF00753 Metallo-beta-lactamase superfamily A6J62_07865 PF00005 ABC transporter A6J62_07865 PF00664 ABC transporter transmembrane region A6J62_07870 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A6J62_07875 PF03966 Trm112p-like protein A6J62_07880 PF02348 Cytidylyltransferase A6J62_07885 PF04293 SpoVR like protein A6J62_07890 PF04285 Protein of unknown function (DUF444) A6J62_07895 PF06798 PrkA serine protein kinase C-terminal domain A6J62_07895 PF08298 PrkA AAA domain A6J62_07900 PF03887 YfbU domain A6J62_07910 PF04055 Radical SAM superfamily A6J62_07915 PF00672 HAMP domain A6J62_07915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_07915 PF12729 Four helix bundle sensory module for signal transduction A6J62_07925 PF01228 Glycine radical A6J62_07925 PF02901 Pyruvate formate lyase-like A6J62_07935 PF00005 ABC transporter A6J62_07940 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_07945 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_07950 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_07955 PF03372 Endonuclease/Exonuclease/phosphatase family A6J62_07960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_07960 PF00672 HAMP domain A6J62_07965 PF10689 Protein of unknown function (DUF2496) A6J62_07970 PF07445 Primosomal replication protein priC A6J62_07975 PF01925 Sulfite exporter TauE/SafE A6J62_07980 PF13307 Helicase C-terminal domain A6J62_07980 PF06733 DEAD_2 A6J62_07985 PF13609 Gram-negative porin A6J62_07990 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6J62_07995 PF02810 SEC-C motif A6J62_08000 PF08668 HDOD domain A6J62_08000 PF00563 EAL domain A6J62_08005 PF00149 Calcineurin-like phosphoesterase A6J62_08010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6J62_08015 PF09190 DALR domain A6J62_08015 PF01406 tRNA synthetases class I (C) catalytic domain A6J62_08020 PF02075 Crossover junction endodeoxyribonuclease RuvC A6J62_08025 PF07499 RuvA, C-terminal domain A6J62_08025 PF01330 RuvA N terminal domain A6J62_08030 PF17864 RuvB AAA lid domain A6J62_08030 PF05491 RuvB C-terminal winged helix domain A6J62_08030 PF05496 Holliday junction DNA helicase RuvB P-loop domain A6J62_08035 PF01654 Cytochrome bd terminal oxidase subunit I A6J62_08040 PF02322 Cytochrome bd terminal oxidase subunit II A6J62_08045 PF08173 Membrane bound YbgT-like protein A6J62_08050 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) A6J62_08055 PF03061 Thioesterase superfamily A6J62_08060 PF01618 MotA/TolQ/ExbB proton channel family A6J62_08065 PF02472 Biopolymer transport protein ExbD/TolR A6J62_08075 PF04052 TolB amino-terminal domain A6J62_08075 PF07676 WD40-like Beta Propeller Repeat A6J62_08080 PF00691 OmpA family A6J62_08090 PF02445 Quinolinate synthetase A protein A6J62_08100 PF00072 Response regulator receiver domain A6J62_08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_08100 PF09308 LuxQ, periplasmic A6J62_08100 PF00512 His Kinase A (phospho-acceptor) domain A6J62_08105 PF06610 L-alanine exporter A6J62_08110 PF01238 Phosphomannose isomerase type I A6J62_08115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J62_08115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J62_08115 PF02378 Phosphotransferase system, EIIC A6J62_08120 PF12833 Helix-turn-helix domain A6J62_08130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J62_08150 PF00171 Aldehyde dehydrogenase family A6J62_08155 PF01590 GAF domain A6J62_08155 PF00158 Sigma-54 interaction domain A6J62_08155 PF02954 Bacterial regulatory protein, Fis family A6J62_08160 PF09905 DNA-binding protein VF530 A6J62_08170 PF00875 DNA photolyase A6J62_08170 PF03441 FAD binding domain of DNA photolyase A6J62_08255 PF00005 ABC transporter A6J62_08315 PF04002 RadC-like JAB domain A6J62_08325 PF13088 BNR repeat-like domain A6J62_08325 PF09264 Vibrio cholerae sialidase, lectin insertion A6J62_08330 PF01979 Amidohydrolase family A6J62_08335 PF00480 ROK family A6J62_08340 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase A6J62_08350 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J62_08355 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A6J62_08360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6J62_08365 PF00701 Dihydrodipicolinate synthetase family A6J62_08370 PF01380 SIS domain A6J62_08370 PF01418 Helix-turn-helix domain, rpiR family A6J62_08375 PF01344 Kelch motif A6J62_08380 PF07646 Kelch motif A6J62_08400 PF02384 N-6 DNA Methylase A6J62_08420 PF18766 SWI2/SNF2 ATPase A6J62_08420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) A6J62_08420 PF11867 Domain of unknown function (DUF3387) A6J62_08440 PF00176 SNF2 family N-terminal domain A6J62_08440 PF00271 Helicase conserved C-terminal domain A6J62_08440 PF12419 SNF2 Helicase protein A6J62_08445 PF00589 Phage integrase family A6J62_08445 PF13356 Arm DNA-binding domain A6J62_08450 PF00589 Phage integrase family A6J62_08450 PF13356 Arm DNA-binding domain A6J62_08460 PF00873 AcrB/AcrD/AcrF family A6J62_08465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_08475 PF02470 MlaD protein A6J62_08480 PF04403 Paraquat-inducible protein A A6J62_08485 PF05552 Conserved TM helix A6J62_08485 PF00924 Mechanosensitive ion channel A6J62_08510 PF08362 YcdC-like protein, C-terminal region A6J62_08510 PF00440 Bacterial regulatory proteins, tetR family A6J62_08515 PF00171 Aldehyde dehydrogenase family A6J62_08520 PF07383 Protein of unknown function (DUF1496) A6J62_08530 PF00440 Bacterial regulatory proteins, tetR family A6J62_08530 PF16295 Tetracyclin repressor-like, C-terminal domain A6J62_08535 PF09317 Domain of unknown function (DUF1974) A6J62_08535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6J62_08535 PF02770 Acyl-CoA dehydrogenase, middle domain A6J62_08535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6J62_08540 PF07055 Enoyl reductase FAD binding domain A6J62_08540 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6J62_08540 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6J62_08550 PF01176 Translation initiation factor 1A / IF-1 A6J62_08555 PF04377 Arginine-tRNA-protein transferase, C terminus A6J62_08555 PF04376 Arginine-tRNA-protein transferase, N terminus A6J62_08560 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A6J62_08570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6J62_08575 PF10692 Protein of unknown function (DUF2498) A6J62_08580 PF01396 Topoisomerase DNA binding C4 zinc finger A6J62_08580 PF01131 DNA topoisomerase A6J62_08580 PF08272 Topoisomerase I zinc-ribbon-like A6J62_08580 PF01751 Toprim domain A6J62_08585 PF00483 Nucleotidyl transferase A6J62_08590 PF00534 Glycosyl transferases group 1 A6J62_08590 PF08323 Starch synthase catalytic domain A6J62_08610 PF04993 TfoX N-terminal domain A6J62_08610 PF04994 TfoX C-terminal domain A6J62_08615 PF00356 Bacterial regulatory proteins, lacI family A6J62_08625 PF02613 Nitrate reductase delta subunit A6J62_08630 PF00072 Response regulator receiver domain A6J62_08630 PF00486 Transcriptional regulatory protein, C terminal A6J62_08635 PF02698 DUF218 domain A6J62_08645 PF17193 MukF C-terminal domain A6J62_08645 PF17192 MukF middle domain A6J62_08645 PF03882 MukF winged-helix domain A6J62_08650 PF04288 MukE-like family A6J62_08655 PF16330 MukB hinge domain A6J62_08655 PF04310 MukB N-terminal A6J62_08660 PF01037 Lrp/AsnC ligand binding domain A6J62_08665 PF01810 LysE type translocator A6J62_08670 PF08497 Radical SAM N-terminal A6J62_08670 PF11842 Domain of unknown function (DUF3362) A6J62_08670 PF04055 Radical SAM superfamily A6J62_08675 PF03707 Bacterial signalling protein N terminal repeat A6J62_08675 PF00990 Diguanylate cyclase, GGDEF domain A6J62_08675 PF00563 EAL domain A6J62_08680 PF05193 Peptidase M16 inactive domain A6J62_08680 PF00675 Insulinase (Peptidase family M16) A6J62_08695 PF03466 LysR substrate binding domain A6J62_08695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_08700 PF08267 Cobalamin-independent synthase, N-terminal domain A6J62_08700 PF01717 Cobalamin-independent synthase, Catalytic domain A6J62_08710 PF03795 YCII-related domain A6J62_08715 PF03061 Thioesterase superfamily A6J62_08720 PF04279 Intracellular septation protein A A6J62_08730 PF02698 DUF218 domain A6J62_08735 PF01370 NAD dependent epimerase/dehydratase family A6J62_08750 PF01226 Formate/nitrite transporter A6J62_08760 PF06796 Periplasmic nitrate reductase protein NapE A6J62_08765 PF03264 NapC/NirT cytochrome c family, N-terminal region A6J62_08770 PF00384 Molybdopterin oxidoreductase A6J62_08770 PF18364 Molybdopterin oxidoreductase N-terminal domain A6J62_08770 PF01568 Molydopterin dinucleotide binding domain A6J62_08795 PF02833 DHHA2 domain A6J62_08795 PF01368 DHH family A6J62_08810 PF00005 ABC transporter A6J62_08815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_08815 PF00005 ABC transporter A6J62_08820 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J62_08820 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_08825 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_08830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_08835 PF00158 Sigma-54 interaction domain A6J62_08835 PF02954 Bacterial regulatory protein, Fis family A6J62_08840 PF04012 PspA/IM30 family A6J62_08855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_08855 PF00529 HlyD membrane-fusion protein of T1SS A6J62_08860 PF13533 Biotin-lipoyl like A6J62_08865 PF00873 AcrB/AcrD/AcrF family A6J62_08870 PF03352 Methyladenine glycosylase A6J62_08875 PF01053 Cys/Met metabolism PLP-dependent enzyme A6J62_08880 PF13396 Phospholipase_D-nuclease N-terminal A6J62_08880 PF13091 PLD-like domain A6J62_08890 PF00209 Sodium:neurotransmitter symporter family A6J62_08895 PF00849 RNA pseudouridylate synthase A6J62_08900 PF01066 CDP-alcohol phosphatidyltransferase A6J62_08905 PF00005 ABC transporter A6J62_08910 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_08915 PF13416 Bacterial extracellular solute-binding protein A6J62_08925 PF06945 Protein of unknown function (DUF1289) A6J62_08940 PF00005 ABC transporter A6J62_08945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_08950 PF03222 Tryptophan/tyrosine permease family A6J62_08960 PF00571 CBS domain A6J62_08960 PF01769 Divalent cation transporter A6J62_08960 PF03448 MgtE intracellular N domain A6J62_08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_08965 PF00512 His Kinase A (phospho-acceptor) domain A6J62_08965 PF09308 LuxQ, periplasmic A6J62_08965 PF00072 Response regulator receiver domain A6J62_08970 PF03707 Bacterial signalling protein N terminal repeat A6J62_08970 PF00990 Diguanylate cyclase, GGDEF domain A6J62_08970 PF00563 EAL domain A6J62_08980 PF04151 Bacterial pre-peptidase C-terminal domain A6J62_08980 PF08453 Peptidase family M9 N-terminal A6J62_08980 PF01752 Collagenase A6J62_08990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_08990 PF12793 Sugar transport-related sRNA regulator N-term A6J62_09010 PF12729 Four helix bundle sensory module for signal transduction A6J62_09010 PF00672 HAMP domain A6J62_09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_09025 PF00563 EAL domain A6J62_09025 PF01590 GAF domain A6J62_09025 PF00990 Diguanylate cyclase, GGDEF domain A6J62_09025 PF00360 Phytochrome region A6J62_09030 PF01386 Ribosomal L25p family A6J62_09040 PF00072 Response regulator receiver domain A6J62_09040 PF00486 Transcriptional regulatory protein, C terminal A6J62_09050 PF04851 Type III restriction enzyme, res subunit A6J62_09050 PF00271 Helicase conserved C-terminal domain A6J62_09055 PF00849 RNA pseudouridylate synthase A6J62_09055 PF01479 S4 domain A6J62_09060 PF07690 Major Facilitator Superfamily A6J62_09070 PF11066 Protein of unknown function (DUF2867) A6J62_09070 PF13460 NAD(P)H-binding A6J62_09075 PF01554 MatE A6J62_09080 PF00005 ABC transporter A6J62_09095 PF06965 Na+/H+ antiporter 1 A6J62_09105 PF00202 Aminotransferase class-III A6J62_09110 PF03435 Saccharopine dehydrogenase NADP binding domain A6J62_09110 PF16653 Saccharopine dehydrogenase C-terminal domain A6J62_09120 PF00691 OmpA family A6J62_09120 PF05736 OprF membrane domain A6J62_09125 PF02321 Outer membrane efflux protein A6J62_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_09145 PF03466 LysR substrate binding domain A6J62_09155 PF01863 Protein of unknown function DUF45 A6J62_09160 PF05971 RNA methyltransferase A6J62_09175 PF04204 Homoserine O-succinyltransferase A6J62_09195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_09210 PF00989 PAS fold A6J62_09210 PF17203 Single cache domain 3 A6J62_09210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A6J62_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_09215 PF00072 Response regulator receiver domain A6J62_09215 PF12431 Transcriptional regulator A6J62_09225 PF00072 Response regulator receiver domain A6J62_09225 PF01584 CheW-like domain A6J62_09245 PF00990 Diguanylate cyclase, GGDEF domain A6J62_09245 PF00072 Response regulator receiver domain A6J62_09265 PF07690 Major Facilitator Superfamily A6J62_09270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A6J62_09270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A6J62_09275 PF10509 Galactokinase galactose-binding signature A6J62_09275 PF00288 GHMP kinases N terminal domain A6J62_09275 PF08544 GHMP kinases C terminal A6J62_09280 PF01263 Aldose 1-epimerase A6J62_09285 PF00990 Diguanylate cyclase, GGDEF domain A6J62_09290 PF00672 HAMP domain A6J62_09290 PF00990 Diguanylate cyclase, GGDEF domain A6J62_09290 PF17154 Gammaproteobacterial periplasmic sensor domain A6J62_09290 PF00563 EAL domain A6J62_09300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J62_09300 PF00205 Thiamine pyrophosphate enzyme, central domain A6J62_09300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J62_09305 PF03306 Alpha-acetolactate decarboxylase A6J62_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_09310 PF03466 LysR substrate binding domain A6J62_09320 PF06628 Catalase-related immune-responsive A6J62_09320 PF00199 Catalase A6J62_09330 PF00080 Copper/zinc superoxide dismutase (SODC) A6J62_09335 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) A6J62_09340 PF00361 Proton-conducting membrane transporter A6J62_09340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A6J62_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_09345 PF03466 LysR substrate binding domain A6J62_09350 PF00501 AMP-binding enzyme A6J62_09350 PF13193 AMP-binding enzyme C-terminal domain A6J62_09380 PF00206 Lyase A6J62_09380 PF10415 Fumarase C C-terminus A6J62_09395 PF01654 Cytochrome bd terminal oxidase subunit I A6J62_09400 PF02322 Cytochrome bd terminal oxidase subunit II A6J62_09405 PF00005 ABC transporter A6J62_09405 PF02687 FtsX-like permease family A6J62_09405 PF12704 MacB-like periplasmic core domain A6J62_09410 PF02687 FtsX-like permease family A6J62_09410 PF12704 MacB-like periplasmic core domain A6J62_09410 PF00005 ABC transporter A6J62_09415 PF12704 MacB-like periplasmic core domain A6J62_09415 PF02687 FtsX-like permease family A6J62_09415 PF00005 ABC transporter A6J62_09425 PF00529 HlyD membrane-fusion protein of T1SS A6J62_09435 PF03466 LysR substrate binding domain A6J62_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_09440 PF00141 Peroxidase A6J62_09445 PF00232 Glycosyl hydrolase family 1 A6J62_09450 PF00356 Bacterial regulatory proteins, lacI family A6J62_09455 PF01042 Endoribonuclease L-PSP A6J62_09460 PF04074 YhcH/YjgK/YiaL A6J62_09465 PF03009 Glycerophosphoryl diester phosphodiesterase family A6J62_09470 PF08220 DeoR-like helix-turn-helix domain A6J62_09470 PF00455 DeoR C terminal sensor domain A6J62_09475 PF17912 MalK OB fold domain A6J62_09475 PF00005 ABC transporter A6J62_09480 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_09485 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_09490 PF13416 Bacterial extracellular solute-binding protein A6J62_09500 PF01618 MotA/TolQ/ExbB proton channel family A6J62_09505 PF01618 MotA/TolQ/ExbB proton channel family A6J62_09510 PF02472 Biopolymer transport protein ExbD/TolR A6J62_09515 PF03544 Gram-negative bacterial TonB protein C-terminal A6J62_09530 PF14743 DNA ligase OB-like domain A6J62_09530 PF01068 ATP dependent DNA ligase domain A6J62_09540 PF01554 MatE A6J62_09560 PF00877 NlpC/P60 family A6J62_09565 PF00672 HAMP domain A6J62_09565 PF02743 Cache domain A6J62_09565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_09580 PF00480 ROK family A6J62_09610 PF03453 MoeA N-terminal region (domain I and II) A6J62_09610 PF03454 MoeA C-terminal region (domain IV) A6J62_09610 PF00994 Probable molybdopterin binding domain A6J62_09615 PF12804 MobA-like NTP transferase domain A6J62_09620 PF00005 ABC transporter A6J62_09620 PF08402 TOBE domain A6J62_09625 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_09630 PF12849 PBP superfamily domain A6J62_09635 PF02954 Bacterial regulatory protein, Fis family A6J62_09635 PF00072 Response regulator receiver domain A6J62_09635 PF00158 Sigma-54 interaction domain A6J62_09640 PF00989 PAS fold A6J62_09640 PF00512 His Kinase A (phospho-acceptor) domain A6J62_09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_09645 PF00005 ABC transporter A6J62_09645 PF12848 ABC transporter A6J62_09650 PF02634 FdhD/NarQ family A6J62_09670 PF02613 Nitrate reductase delta subunit A6J62_09680 PF00384 Molybdopterin oxidoreductase A6J62_09680 PF01568 Molydopterin dinucleotide binding domain A6J62_09680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6J62_09685 PF13247 4Fe-4S dicluster domain A6J62_09700 PF02146 Sir2 family A6J62_09705 PF04461 Protein of unknown function (DUF520) A6J62_09710 PF00793 DAHP synthetase I family A6J62_09725 PF13509 S1 domain A6J62_09725 PF17783 CvfB-like winged helix domain A6J62_09730 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A6J62_09730 PF01189 16S rRNA methyltransferase RsmB/F A6J62_09730 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A6J62_09735 PF02470 MlaD protein A6J62_09740 PF04403 Paraquat-inducible protein A A6J62_09745 PF00664 ABC transporter transmembrane region A6J62_09745 PF00005 ABC transporter A6J62_09750 PF13185 GAF domain A6J62_09755 PF04352 ProQ/FINO family A6J62_09755 PF17516 ProQ C-terminal domain A6J62_09760 PF17804 Tail specific protease N-terminal domain A6J62_09760 PF03572 Peptidase family S41 A6J62_09760 PF00595 PDZ domain A6J62_09760 PF11818 C-terminal domain of tail specific protease (DUF3340) A6J62_09770 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A6J62_09770 PF01433 Peptidase family M1 domain A6J62_09770 PF11940 Domain of unknown function (DUF3458) Ig-like fold A6J62_09780 PF05088 Bacterial NAD-glutamate dehydrogenase A6J62_09785 PF01180 Dihydroorotate dehydrogenase A6J62_09790 PF07126 Cell-division protein ZapC A6J62_09795 PF10672 S-adenosylmethionine-dependent methyltransferase A6J62_09795 PF02926 THUMP domain A6J62_09795 PF01170 Putative RNA methylase family UPF0020 A6J62_09815 PF04957 Ribosome modulation factor A6J62_09820 PF07977 FabA-like domain A6J62_09825 PF13654 AAA domain A6J62_09825 PF05362 Lon protease (S16) C-terminal proteolytic domain A6J62_09830 PF17414 MatP C-terminal ribbon-helix-helix domain A6J62_09830 PF06303 MatP N-terminal domain A6J62_09930 PF01381 Helix-turn-helix A6J62_09950 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII A6J62_09955 PF10734 Protein of unknown function (DUF2523) A6J62_09960 PF05707 Zonular occludens toxin (Zot) A6J62_09965 PF01375 Heat-labile enterotoxin alpha chain A6J62_09970 PF01376 Heat-labile enterotoxin beta chain A6J62_09980 PF01381 Helix-turn-helix A6J62_10005 PF01381 Helix-turn-helix A6J62_10035 PF02794 RTX toxin acyltransferase family A6J62_10045 PF00664 ABC transporter transmembrane region A6J62_10045 PF00005 ABC transporter A6J62_10045 PF03412 Peptidase C39 family A6J62_10055 PF00664 ABC transporter transmembrane region A6J62_10055 PF03412 Peptidase C39 family A6J62_10055 PF00005 ABC transporter A6J62_10060 PF00072 Response regulator receiver domain A6J62_10060 PF09308 LuxQ, periplasmic A6J62_10060 PF00512 His Kinase A (phospho-acceptor) domain A6J62_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_10075 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6J62_10090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6J62_10090 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A6J62_10100 PF00403 Heavy-metal-associated domain A6J62_10115 PF13545 Crp-like helix-turn-helix domain A6J62_10115 PF00027 Cyclic nucleotide-binding domain A6J62_10120 PF00582 Universal stress protein family A6J62_10125 PF01171 PP-loop family A6J62_10145 PF08402 TOBE domain A6J62_10145 PF00005 ABC transporter A6J62_10150 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_10155 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_10160 PF13416 Bacterial extracellular solute-binding protein A6J62_10165 PF13416 Bacterial extracellular solute-binding protein A6J62_10180 PF01235 Sodium:alanine symporter family A6J62_10185 PF01810 LysE type translocator A6J62_10210 PF16671 Actin cross-linking domain A6J62_10210 PF04717 Type VI secretion system, phage-baseplate injector A6J62_10215 PF05638 Type VI secretion system effector, Hcp A6J62_10220 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A6J62_10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10225 PF02743 Cache domain A6J62_10225 PF00672 HAMP domain A6J62_10230 PF07690 Major Facilitator Superfamily A6J62_10235 PF00529 HlyD membrane-fusion protein of T1SS A6J62_10235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_10240 PF02321 Outer membrane efflux protein A6J62_10250 PF00271 Helicase conserved C-terminal domain A6J62_10250 PF00270 DEAD/DEAH box helicase A6J62_10255 PF08447 PAS fold A6J62_10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10255 PF13426 PAS domain A6J62_10260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10260 PF12729 Four helix bundle sensory module for signal transduction A6J62_10260 PF00672 HAMP domain A6J62_10265 PF00672 HAMP domain A6J62_10265 PF17202 Single cache domain 3 A6J62_10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10270 PF01584 CheW-like domain A6J62_10275 PF00072 Response regulator receiver domain A6J62_10275 PF01339 CheB methylesterase A6J62_10285 PF01739 CheR methyltransferase, SAM binding domain A6J62_10285 PF03705 CheR methyltransferase, all-alpha domain A6J62_10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_10290 PF01627 Hpt domain A6J62_10290 PF01584 CheW-like domain A6J62_10290 PF00072 Response regulator receiver domain A6J62_10295 PF01627 Hpt domain A6J62_10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_10295 PF07194 P2 response regulator binding domain A6J62_10295 PF01584 CheW-like domain A6J62_10295 PF02895 Signal transducing histidine kinase, homodimeric domain A6J62_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10310 PF00672 HAMP domain A6J62_10315 PF00893 Small Multidrug Resistance protein A6J62_10320 PF00875 DNA photolyase A6J62_10320 PF03441 FAD binding domain of DNA photolyase A6J62_10325 PF07690 Major Facilitator Superfamily A6J62_10330 PF03466 LysR substrate binding domain A6J62_10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_10340 PF03099 Biotin/lipoate A/B protein ligase family A6J62_10340 PF10437 Bacterial lipoate protein ligase C-terminus A6J62_10345 PF00012 Hsp70 protein A6J62_10355 PF00270 DEAD/DEAH box helicase A6J62_10355 PF04408 Helicase associated domain (HA2) A6J62_10355 PF00271 Helicase conserved C-terminal domain A6J62_10355 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A6J62_10355 PF11898 Domain of unknown function (DUF3418) A6J62_10380 PF00990 Diguanylate cyclase, GGDEF domain A6J62_10380 PF00563 EAL domain A6J62_10380 PF03707 Bacterial signalling protein N terminal repeat A6J62_10395 PF00012 Hsp70 protein A6J62_10400 PF00012 Hsp70 protein A6J62_10405 PF00990 Diguanylate cyclase, GGDEF domain A6J62_10405 PF17158 Membrane-associated sensor, integral membrane domain A6J62_10415 PF03707 Bacterial signalling protein N terminal repeat A6J62_10415 PF00990 Diguanylate cyclase, GGDEF domain A6J62_10415 PF00563 EAL domain A6J62_10435 PF06508 Queuosine biosynthesis protein QueC A6J62_10440 PF04055 Radical SAM superfamily A6J62_10450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J62_10450 PF14824 Sirohaem biosynthesis protein central A6J62_10450 PF10414 Sirohaem synthase dimerisation region A6J62_10455 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_10460 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_10465 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_10470 PF00005 ABC transporter A6J62_10475 PF01027 Inhibitor of apoptosis-promoting Bax1 A6J62_10480 PF04358 DsrC like protein A6J62_10485 PF00708 Acylphosphatase A6J62_10490 PF17785 PUA-like domain A6J62_10490 PF10672 S-adenosylmethionine-dependent methyltransferase A6J62_10495 PF00990 Diguanylate cyclase, GGDEF domain A6J62_10505 PF08534 Redoxin A6J62_10505 PF00462 Glutaredoxin A6J62_10510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6J62_10510 PF00672 HAMP domain A6J62_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_10510 PF00512 His Kinase A (phospho-acceptor) domain A6J62_10510 PF00072 Response regulator receiver domain A6J62_10510 PF01627 Hpt domain A6J62_10515 PF00072 Response regulator receiver domain A6J62_10520 PF02798 Glutathione S-transferase, N-terminal domain A6J62_10520 PF14497 Glutathione S-transferase, C-terminal domain A6J62_10530 PF04209 homogentisate 1,2-dioxygenase A6J62_10535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_10540 PF01546 Peptidase family M20/M25/M40 A6J62_10540 PF07687 Peptidase dimerisation domain A6J62_10555 PF00501 AMP-binding enzyme A6J62_10555 PF13193 AMP-binding enzyme C-terminal domain A6J62_10555 PF16177 Acetyl-coenzyme A synthetase N-terminus A6J62_10560 PF04303 PrpF protein A6J62_10565 PF00694 Aconitase C-terminal domain A6J62_10565 PF00330 Aconitase family (aconitate hydratase) A6J62_10570 PF00285 Citrate synthase, C-terminal domain A6J62_10580 PF00392 Bacterial regulatory proteins, gntR family A6J62_10580 PF07729 FCD domain A6J62_10595 PF01970 Tripartite tricarboxylate transporter TctA family A6J62_10610 PF02653 Branched-chain amino acid transport system / permease component A6J62_10615 PF00005 ABC transporter A6J62_10620 PF13407 Periplasmic binding protein domain A6J62_10645 PF00072 Response regulator receiver domain A6J62_10645 PF00486 Transcriptional regulatory protein, C terminal A6J62_10650 PF00672 HAMP domain A6J62_10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_10650 PF00512 His Kinase A (phospho-acceptor) domain A6J62_10655 PF06629 MltA-interacting protein MipA A6J62_10660 PF04393 Protein of unknown function (DUF535) A6J62_10665 PF00158 Sigma-54 interaction domain A6J62_10665 PF00072 Response regulator receiver domain A6J62_10665 PF02954 Bacterial regulatory protein, Fis family A6J62_10670 PF00512 His Kinase A (phospho-acceptor) domain A6J62_10670 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_10675 PF00939 Sodium:sulfate symporter transmembrane region A6J62_10680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10680 PF00672 HAMP domain A6J62_10685 PF00842 Alanine racemase, C-terminal domain A6J62_10685 PF01168 Alanine racemase, N-terminal domain A6J62_10690 PF00892 EamA-like transporter family A6J62_10700 PF13302 Acetyltransferase (GNAT) domain A6J62_10705 PF00158 Sigma-54 interaction domain A6J62_10705 PF18024 Helix-turn-helix domain A6J62_10710 PF05128 Domain of unknown function (DUF697) A6J62_10715 PF04317 YcjX-like family, DUF463 A6J62_10730 PF04715 Anthranilate synthase component I, N terminal region A6J62_10730 PF00425 chorismate binding enzyme A6J62_10735 PF00293 NUDIX domain A6J62_10740 PF03222 Tryptophan/tyrosine permease family A6J62_10745 PF03315 Serine dehydratase beta chain A6J62_10745 PF03313 Serine dehydratase alpha chain A6J62_10750 PF01242 6-pyruvoyl tetrahydropterin synthase A6J62_10755 PF00672 HAMP domain A6J62_10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10760 PF01336 OB-fold nucleic acid binding domain A6J62_10760 PF00152 tRNA synthetases class II (D, K and N) A6J62_10765 PF08543 Phosphomethylpyrimidine kinase A6J62_10770 PF00672 HAMP domain A6J62_10770 PF01966 HD domain A6J62_10780 PF00155 Aminotransferase class I and II A6J62_10795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_10795 PF00672 HAMP domain A6J62_10795 PF17200 Single Cache domain 2 A6J62_10800 PF04349 Periplasmic glucan biosynthesis protein, MdoG A6J62_10805 PF13506 Glycosyl transferase family 21 A6J62_10810 PF00356 Bacterial regulatory proteins, lacI family A6J62_10815 PF04794 YdjC-like protein A6J62_10820 PF11975 Family 4 glycosyl hydrolase C-terminal domain A6J62_10820 PF02056 Family 4 glycosyl hydrolase A6J62_10825 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A6J62_10830 PF02378 Phosphotransferase system, EIIC A6J62_10835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6J62_10840 PF01522 Polysaccharide deacetylase A6J62_10845 PF02028 BCCT, betaine/carnitine/choline family transporter A6J62_10850 PF01047 MarR family A6J62_10855 PF00072 Response regulator receiver domain A6J62_10855 PF00196 Bacterial regulatory proteins, luxR family A6J62_10860 PF07730 Histidine kinase A6J62_10860 PF17200 Single Cache domain 2 A6J62_10870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6J62_10875 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J62_10890 PF00753 Metallo-beta-lactamase superfamily A6J62_10895 PF05951 Bacterial protein of unknown function (DUF882) A6J62_10900 PF03734 L,D-transpeptidase catalytic domain A6J62_10900 PF01471 Putative peptidoglycan binding domain A6J62_10925 PF00925 GTP cyclohydrolase II A6J62_10935 PF07690 Major Facilitator Superfamily A6J62_10950 PF00521 DNA gyrase/topoisomerase IV, subunit A A6J62_10950 PF03989 DNA gyrase C-terminal domain, beta-propeller A6J62_10960 PF03477 ATP cone domain A6J62_10960 PF02867 Ribonucleotide reductase, barrel domain A6J62_10960 PF00317 Ribonucleotide reductase, all-alpha domain A6J62_10965 PF00268 Ribonucleotide reductase, small chain A6J62_10970 PF00970 Oxidoreductase FAD-binding domain A6J62_10970 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J62_10970 PF00175 Oxidoreductase NAD-binding domain A6J62_10985 PF00994 Probable molybdopterin binding domain A6J62_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_11000 PF00672 HAMP domain A6J62_11000 PF17200 Single Cache domain 2 A6J62_11015 PF00005 ABC transporter A6J62_11020 PF01032 FecCD transport family A6J62_11025 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A6J62_11035 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A6J62_11040 PF02654 Cobalamin-5-phosphate synthase A6J62_11045 PF02277 Phosphoribosyltransferase A6J62_11055 PF01641 SelR domain A6J62_11065 PF00929 Exonuclease A6J62_11065 PF08411 Exonuclease C-terminal A6J62_11070 PF03788 LrgA family A6J62_11075 PF04172 LrgB-like family A6J62_11080 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region A6J62_11080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J62_11090 PF02222 ATP-grasp domain A6J62_11100 PF05724 Thiopurine S-methyltransferase (TPMT) A6J62_11115 PF00216 Bacterial DNA-binding protein A6J62_11120 PF03484 tRNA synthetase B5 domain A6J62_11120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A6J62_11120 PF03483 B3/4 domain A6J62_11120 PF01588 Putative tRNA binding domain A6J62_11120 PF03147 Ferredoxin-fold anticodon binding domain A6J62_11125 PF01409 tRNA synthetases class II core domain (F) A6J62_11125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A6J62_11135 PF00072 Response regulator receiver domain A6J62_11135 PF00990 Diguanylate cyclase, GGDEF domain A6J62_11160 PF01066 CDP-alcohol phosphatidyltransferase A6J62_11165 PF02151 UvrB/uvrC motif A6J62_11165 PF01541 GIY-YIG catalytic domain A6J62_11165 PF08459 UvrC Helix-hairpin-helix N-terminal A6J62_11170 PF00196 Bacterial regulatory proteins, luxR family A6J62_11170 PF00072 Response regulator receiver domain A6J62_11175 PF03104 DNA polymerase family B, exonuclease domain A6J62_11175 PF00136 DNA polymerase family B A6J62_11180 PF00563 EAL domain A6J62_11180 PF13426 PAS domain A6J62_11180 PF00990 Diguanylate cyclase, GGDEF domain A6J62_11190 PF01132 Elongation factor P (EF-P) OB domain A6J62_11190 PF08207 Elongation factor P (EF-P) KOW-like domain A6J62_11190 PF09285 Elongation factor P, C-terminal A6J62_11195 PF04269 Protein of unknown function, DUF440 A6J62_11205 PF07702 UTRA domain A6J62_11205 PF00392 Bacterial regulatory proteins, gntR family A6J62_11210 PF01979 Amidohydrolase family A6J62_11215 PF00491 Arginase family A6J62_11220 PF17392 Urocanase C-terminal domain A6J62_11220 PF17391 Urocanase N-terminal domain A6J62_11220 PF01175 Urocanase Rossmann-like domain A6J62_11225 PF00221 Aromatic amino acid lyase A6J62_11235 PF00089 Trypsin A6J62_11240 PF04191 Phospholipid methyltransferase A6J62_11245 PF13183 4Fe-4S dicluster domain A6J62_11245 PF02913 FAD linked oxidases, C-terminal domain A6J62_11245 PF01565 FAD binding domain A6J62_11260 PF00691 OmpA family A6J62_11260 PF13488 Glycine zipper A6J62_11280 PF01259 SAICAR synthetase A6J62_11290 PF03949 Malic enzyme, NAD binding domain A6J62_11290 PF00390 Malic enzyme, N-terminal domain A6J62_11300 PF02698 DUF218 domain A6J62_11305 PF08448 PAS fold A6J62_11305 PF00990 Diguanylate cyclase, GGDEF domain A6J62_11310 PF00266 Aminotransferase class-V A6J62_11320 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_11325 PF00664 ABC transporter transmembrane region A6J62_11325 PF00005 ABC transporter A6J62_11330 PF00005 ABC transporter A6J62_11330 PF00664 ABC transporter transmembrane region A6J62_11335 PF01479 S4 domain A6J62_11335 PF00849 RNA pseudouridylate synthase A6J62_11340 PF01300 Telomere recombination A6J62_11345 PF02811 PHP domain A6J62_11350 PF08056 Tryptophan operon leader peptide A6J62_11355 PF00425 chorismate binding enzyme A6J62_11355 PF04715 Anthranilate synthase component I, N terminal region A6J62_11360 PF00117 Glutamine amidotransferase class-I A6J62_11365 PF00591 Glycosyl transferase family, a/b domain A6J62_11365 PF02885 Glycosyl transferase family, helical bundle domain A6J62_11370 PF00218 Indole-3-glycerol phosphate synthase A6J62_11370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A6J62_11375 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_11380 PF00290 Tryptophan synthase alpha chain A6J62_11385 PF00375 Sodium:dicarboxylate symporter family A6J62_11390 PF00265 Thymidine kinase A6J62_11395 PF01336 OB-fold nucleic acid binding domain A6J62_11395 PF00152 tRNA synthetases class II (D, K and N) A6J62_11395 PF02938 GAD domain A6J62_11400 PF01904 Protein of unknown function DUF72 A6J62_11405 PF13649 Methyltransferase domain A6J62_11410 PF08003 Protein of unknown function (DUF1698) A6J62_11430 PF00266 Aminotransferase class-V A6J62_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_11440 PF00989 PAS fold A6J62_11440 PF00512 His Kinase A (phospho-acceptor) domain A6J62_11455 PF04994 TfoX C-terminal domain A6J62_11455 PF04993 TfoX N-terminal domain A6J62_11465 PF03956 Lysine exporter LysO A6J62_11475 PF00282 Pyridoxal-dependent decarboxylase conserved domain A6J62_11480 PF01380 SIS domain A6J62_11480 PF01418 Helix-turn-helix domain, rpiR family A6J62_11485 PF00465 Iron-containing alcohol dehydrogenase A6J62_11485 PF00171 Aldehyde dehydrogenase family A6J62_11490 PF00462 Glutaredoxin A6J62_11495 PF06826 Predicted Permease Membrane Region A6J62_11495 PF02080 TrkA-C domain A6J62_11500 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_11500 PF07724 AAA domain (Cdc48 subfamily) A6J62_11500 PF17871 AAA lid domain A6J62_11500 PF02861 Clp amino terminal domain, pathogenicity island component A6J62_11500 PF10431 C-terminal, D2-small domain, of ClpB protein A6J62_11505 PF02617 ATP-dependent Clp protease adaptor protein ClpS A6J62_11510 PF00313 'Cold-shock' DNA-binding domain A6J62_11515 PF03971 Monomeric isocitrate dehydrogenase A6J62_11520 PF00849 RNA pseudouridylate synthase A6J62_11525 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A6J62_11525 PF01502 Phosphoribosyl-AMP cyclohydrolase A6J62_11530 PF00977 Histidine biosynthesis protein A6J62_11535 PF00977 Histidine biosynthesis protein A6J62_11540 PF00117 Glutamine amidotransferase class-I A6J62_11545 PF00475 Imidazoleglycerol-phosphate dehydratase A6J62_11545 PF08645 Polynucleotide kinase 3 phosphatase A6J62_11550 PF00155 Aminotransferase class I and II A6J62_11555 PF00815 Histidinol dehydrogenase A6J62_11560 PF08029 HisG, C-terminal domain A6J62_11560 PF01634 ATP phosphoribosyltransferase A6J62_11565 PF03553 Na+/H+ antiporter family A6J62_11570 PF00816 H-NS histone family A6J62_11575 PF00294 pfkB family carbohydrate kinase A6J62_11585 PF04356 Protein of unknown function (DUF489) A6J62_11590 PF08328 Adenylosuccinate lyase C-terminal A6J62_11590 PF00206 Lyase A6J62_11600 PF16036 Chalcone isomerase-like A6J62_11625 PF00106 short chain dehydrogenase A6J62_11635 PF01435 Peptidase family M48 A6J62_11650 PF08241 Methyltransferase domain A6J62_11655 PF00155 Aminotransferase class I and II A6J62_11660 PF06968 Biotin and Thiamin Synthesis associated domain A6J62_11660 PF04055 Radical SAM superfamily A6J62_11665 PF00202 Aminotransferase class-III A6J62_11670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6J62_11670 PF02403 Seryl-tRNA synthetase N-terminal domain A6J62_11675 PF16193 AAA C-terminal domain A6J62_11675 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_11675 PF12002 MgsA AAA+ ATPase C terminal A6J62_11680 PF03548 Outer membrane lipoprotein carrier protein LolA A6J62_11685 PF07516 SecA Wing and Scaffold domain A6J62_11685 PF02810 SEC-C motif A6J62_11685 PF07517 SecA DEAD-like domain A6J62_11685 PF01043 SecA preprotein cross-linking domain A6J62_11690 PF01207 Dihydrouridine synthase (Dus) A6J62_11695 PF00990 Diguanylate cyclase, GGDEF domain A6J62_11700 PF00005 ABC transporter A6J62_11705 PF02653 Branched-chain amino acid transport system / permease component A6J62_11715 PF09905 DNA-binding protein VF530 A6J62_11720 PF04217 Protein of unknown function, DUF412 A6J62_11725 PF00871 Acetokinase family A6J62_11730 PF07085 DRTGG domain A6J62_11730 PF01515 Phosphate acetyl/butaryl transferase A6J62_11735 PF13409 Glutathione S-transferase, N-terminal domain A6J62_11740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_11740 PF00005 ABC transporter A6J62_11745 PF00005 ABC transporter A6J62_11745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_11750 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_11750 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J62_11755 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_11760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_11770 PF08448 PAS fold A6J62_11770 PF13188 PAS domain A6J62_11770 PF00072 Response regulator receiver domain A6J62_11770 PF00512 His Kinase A (phospho-acceptor) domain A6J62_11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_11775 PF02954 Bacterial regulatory protein, Fis family A6J62_11775 PF00158 Sigma-54 interaction domain A6J62_11775 PF00072 Response regulator receiver domain A6J62_11780 PF00563 EAL domain A6J62_11780 PF00990 Diguanylate cyclase, GGDEF domain A6J62_11780 PF03707 Bacterial signalling protein N terminal repeat A6J62_11780 PF13188 PAS domain A6J62_11785 PF00512 His Kinase A (phospho-acceptor) domain A6J62_11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_11790 PF13426 PAS domain A6J62_11790 PF13188 PAS domain A6J62_11790 PF00989 PAS fold A6J62_11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_11790 PF00512 His Kinase A (phospho-acceptor) domain A6J62_11800 PF00072 Response regulator receiver domain A6J62_11815 PF01300 Telomere recombination A6J62_11815 PF03481 Putative GTP-binding controlling metal-binding A6J62_11835 PF01161 Phosphatidylethanolamine-binding protein A6J62_11845 PF00704 Glycosyl hydrolases family 18 A6J62_11845 PF06483 Chitinase C A6J62_11860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J62_11860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J62_11865 PF01022 Bacterial regulatory protein, arsR family A6J62_11875 PF08448 PAS fold A6J62_11875 PF00990 Diguanylate cyclase, GGDEF domain A6J62_11885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6J62_11900 PF01037 Lrp/AsnC ligand binding domain A6J62_11900 PF13404 AsnC-type helix-turn-helix domain A6J62_11905 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_11910 PF08496 Peptidase family S49 N-terminal A6J62_11910 PF01343 Peptidase family S49 A6J62_11915 PF00106 short chain dehydrogenase A6J62_11920 PF03692 Putative zinc- or iron-chelating domain A6J62_11925 PF03692 Putative zinc- or iron-chelating domain A6J62_11930 PF02132 RecR protein A6J62_11930 PF13662 Toprim domain A6J62_11935 PF02575 YbaB/EbfC DNA-binding family A6J62_11940 PF12170 DNA polymerase III tau subunit V interacting with alpha A6J62_11940 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A6J62_11940 PF12169 DNA polymerase III subunits gamma and tau domain III A6J62_11945 PF00156 Phosphoribosyl transferase domain A6J62_11950 PF04304 Protein of unknown function (DUF454) A6J62_11960 PF00072 Response regulator receiver domain A6J62_11965 PF03466 LysR substrate binding domain A6J62_11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_11970 PF00881 Nitroreductase family A6J62_11975 PF00378 Enoyl-CoA hydratase/isomerase A6J62_11975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6J62_11975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6J62_11980 PF00108 Thiolase, N-terminal domain A6J62_11980 PF02803 Thiolase, C-terminal domain A6J62_11990 PF08281 Sigma-70, region 4 A6J62_11990 PF04542 Sigma-70 region 2 A6J62_12000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J62_12005 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6J62_12010 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6J62_12015 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A6J62_12015 PF12557 Cob(I)alamin adenosyltransferase N terminal A6J62_12020 PF05170 AsmA family A6J62_12025 PF00485 Phosphoribulokinase / Uridine kinase family A6J62_12035 PF10609 NUBPL iron-transfer P-loop NTPase A6J62_12040 PF01588 Putative tRNA binding domain A6J62_12040 PF09334 tRNA synthetases class I (M) A6J62_12050 PF01048 Phosphorylase superfamily A6J62_12055 PF00403 Heavy-metal-associated domain A6J62_12065 PF00571 CBS domain A6J62_12065 PF03061 Thioesterase superfamily A6J62_12065 PF00392 Bacterial regulatory proteins, gntR family A6J62_12065 PF07085 DRTGG domain A6J62_12070 PF07694 5TMR of 5TMR-LYT A6J62_12070 PF00990 Diguanylate cyclase, GGDEF domain A6J62_12075 PF02391 MoaE protein A6J62_12080 PF02597 ThiS family A6J62_12085 PF01967 MoaC family A6J62_12090 PF00994 Probable molybdopterin binding domain A6J62_12095 PF06463 Molybdenum Cofactor Synthesis C A6J62_12095 PF04055 Radical SAM superfamily A6J62_12100 PF01933 Uncharacterised protein family UPF0052 A6J62_12105 PF01627 Hpt domain A6J62_12110 PF02954 Bacterial regulatory protein, Fis family A6J62_12110 PF00072 Response regulator receiver domain A6J62_12110 PF00158 Sigma-54 interaction domain A6J62_12120 PF17757 UvrB interaction domain A6J62_12120 PF04851 Type III restriction enzyme, res subunit A6J62_12120 PF00271 Helicase conserved C-terminal domain A6J62_12120 PF12344 Ultra-violet resistance protein B A6J62_12120 PF02151 UvrB/uvrC motif A6J62_12130 PF02508 Rnf-Nqr subunit, membrane protein A6J62_12135 PF04060 Putative Fe-S cluster A6J62_12140 PF10531 SLBB domain A6J62_12140 PF12838 4Fe-4S dicluster domain A6J62_12140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A6J62_12140 PF13375 RnfC Barrel sandwich hybrid domain A6J62_12145 PF03116 NQR2, RnfD, RnfE family A6J62_12150 PF04205 FMN-binding domain A6J62_12155 PF02508 Rnf-Nqr subunit, membrane protein A6J62_12160 PF10576 Iron-sulfur binding domain of endonuclease III A6J62_12160 PF00730 HhH-GPD superfamily base excision DNA repair protein A6J62_12160 PF00633 Helix-hairpin-helix motif A6J62_12165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6J62_12170 PF10952 Protein of unknown function (DUF2753) A6J62_12175 PF18393 MotY N-terminal domain A6J62_12175 PF00691 OmpA family A6J62_12180 PF00929 Exonuclease A6J62_12185 PF03553 Na+/H+ antiporter family A6J62_12185 PF13726 Na+-H+ antiporter family A6J62_12190 PF00156 Phosphoribosyl transferase domain A6J62_12195 PF02674 Colicin V production protein A6J62_12200 PF05036 Sporulation related domain A6J62_12205 PF02875 Mur ligase family, glutamate ligase domain A6J62_12205 PF08245 Mur ligase middle domain A6J62_12210 PF17848 Acetyl-coA carboxylase zinc finger domain A6J62_12210 PF01039 Carboxyl transferase domain A6J62_12215 PF01416 tRNA pseudouridine synthase A6J62_12225 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A6J62_12225 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6J62_12230 PF02378 Phosphotransferase system, EIIC A6J62_12230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6J62_12230 PF00367 phosphotransferase system, EIIB A6J62_12235 PF01979 Amidohydrolase family A6J62_12240 PF01047 MarR family A6J62_12240 PF00480 ROK family A6J62_12245 PF00999 Sodium/hydrogen exchanger family A6J62_12245 PF02254 TrkA-N domain A6J62_12250 PF00733 Asparagine synthase A6J62_12250 PF13537 Glutamine amidotransferase domain A6J62_12255 PF02357 Transcription termination factor nusG A6J62_12260 PF00854 POT family A6J62_12265 PF00762 Ferrochelatase A6J62_12270 PF05191 Adenylate kinase, active site lid A6J62_12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_12275 PF00183 Hsp90 protein A6J62_12280 PF00486 Transcriptional regulatory protein, C terminal A6J62_12285 PF17323 Trans-membrane regulatory protein ToxS A6J62_12295 PF12850 Calcineurin-like phosphoesterase superfamily domain A6J62_12300 PF01370 NAD dependent epimerase/dehydratase family A6J62_12300 PF08338 Domain of unknown function (DUF1731) A6J62_12305 PF00106 short chain dehydrogenase A6J62_12310 PF00085 Thioredoxin A6J62_12320 PF01145 SPFH domain / Band 7 family A6J62_12320 PF16200 C-terminal region of band_7 A6J62_12325 PF01957 NfeD-like C-terminal, partner-binding A6J62_12330 PF13411 MerR HTH family regulatory protein A6J62_12340 PF13609 Gram-negative porin A6J62_12345 PF00533 BRCA1 C Terminus (BRCT) domain A6J62_12345 PF12826 Helix-hairpin-helix motif A6J62_12345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A6J62_12345 PF03120 NAD-dependent DNA ligase OB-fold domain A6J62_12345 PF01653 NAD-dependent DNA ligase adenylation domain A6J62_12350 PF04354 ZipA, C-terminal FtsZ-binding domain A6J62_12360 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_12370 PF00381 PTS HPr component phosphorylation site A6J62_12375 PF00391 PEP-utilising enzyme, mobile domain A6J62_12375 PF02896 PEP-utilising enzyme, TIM barrel domain A6J62_12375 PF05524 PEP-utilising enzyme, N-terminal A6J62_12380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6J62_12385 PF01494 FAD binding domain A6J62_12390 PF00919 Uncharacterized protein family UPF0004 A6J62_12390 PF01938 TRAM domain A6J62_12390 PF04055 Radical SAM superfamily A6J62_12395 PF02562 PhoH-like protein A6J62_12400 PF02130 Uncharacterized protein family UPF0054 A6J62_12405 PF03471 Transporter associated domain A6J62_12405 PF00571 CBS domain A6J62_12410 PF00795 Carbon-nitrogen hydrolase A6J62_12415 PF07295 Zinc-ribbon containing domain A6J62_12420 PF13603 Leucyl-tRNA synthetase, Domain 2 A6J62_12420 PF00133 tRNA synthetases class I (I, L, M and V) A6J62_12420 PF08264 Anticodon-binding domain of tRNA A6J62_12425 PF04390 Lipopolysaccharide-assembly A6J62_12430 PF14840 Processivity clamp loader gamma complex DNA pol III C-term A6J62_12430 PF06144 DNA polymerase III, delta subunit A6J62_12440 PF02590 Predicted SPOUT methyltransferase A6J62_12445 PF03717 Penicillin-binding Protein dimerisation domain A6J62_12445 PF00905 Penicillin binding protein transpeptidase domain A6J62_12450 PF01098 Cell cycle protein A6J62_12455 PF05036 Sporulation related domain A6J62_12455 PF03330 Lytic transglycolase A6J62_12460 PF00768 D-alanyl-D-alanine carboxypeptidase A6J62_12460 PF07943 Penicillin-binding protein 5, C-terminal domain A6J62_12465 PF04359 Protein of unknown function (DUF493) A6J62_12470 PF03099 Biotin/lipoate A/B protein ligase family A6J62_12475 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A6J62_12475 PF04055 Radical SAM superfamily A6J62_12485 PF00464 Serine hydroxymethyltransferase A6J62_12505 PF13614 AAA domain A6J62_12505 PF13807 G-rich domain on putative tyrosine kinase A6J62_12505 PF02706 Chain length determinant protein A6J62_12510 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A6J62_12510 PF02563 Polysaccharide biosynthesis/export protein A6J62_12510 PF10531 SLBB domain A6J62_12520 PF02397 Bacterial sugar transferase A6J62_12535 PF17945 Beta/Gamma crystallin A6J62_12535 PF12561 ToxR activated gene A lipoprotein domain A6J62_12550 PF03808 Glycosyl transferase WecB/TagA/CpsF family A6J62_12560 PF00534 Glycosyl transferases group 1 A6J62_12560 PF00862 Sucrose synthase A6J62_12570 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_12590 PF12464 Maltose acetyltransferase A6J62_12590 PF14602 Hexapeptide repeat of succinyl-transferase A6J62_12595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6J62_12595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6J62_12595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6J62_12600 PF02350 UDP-N-acetylglucosamine 2-epimerase A6J62_12605 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6J62_12610 PF00873 AcrB/AcrD/AcrF family A6J62_12615 PF13533 Biotin-lipoyl like A6J62_12640 PF00128 Alpha amylase, catalytic domain A6J62_12640 PF16657 Maltogenic Amylase, C-terminal domain A6J62_12645 PF02378 Phosphotransferase system, EIIC A6J62_12645 PF00367 phosphotransferase system, EIIB A6J62_12650 PF00356 Bacterial regulatory proteins, lacI family A6J62_12660 PF00005 ABC transporter A6J62_12660 PF09383 NIL domain A6J62_12665 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_12670 PF03180 NLPA lipoprotein A6J62_12675 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) A6J62_12680 PF07348 Syd protein (SUKH-2) A6J62_12685 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A6J62_12685 PF14489 QueF-like protein A6J62_12695 PF00990 Diguanylate cyclase, GGDEF domain A6J62_12700 PF03641 Possible lysine decarboxylase A6J62_12700 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases A6J62_12700 PF11892 Domain of unknown function (DUF3412) A6J62_12705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6J62_12705 PF01367 5'-3' exonuclease, C-terminal SAM fold A6J62_12710 PF04241 Protein of unknown function (DUF423) A6J62_12715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_12715 PF03466 LysR substrate binding domain A6J62_12720 PF02926 THUMP domain A6J62_12720 PF02568 Thiamine biosynthesis protein (ThiI) A6J62_12725 PF00691 OmpA family A6J62_12725 PF13677 Membrane MotB of proton-channel complex MotA/MotB A6J62_12730 PF01618 MotA/TolQ/ExbB proton channel family A6J62_12735 PF02609 Exonuclease VII small subunit A6J62_12740 PF00348 Polyprenyl synthetase A6J62_12745 PF02780 Transketolase, C-terminal domain A6J62_12745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A6J62_12745 PF02779 Transketolase, pyrimidine binding domain A6J62_12750 PF00849 RNA pseudouridylate synthase A6J62_12755 PF04287 tRNA pseudouridine synthase C A6J62_12770 PF13302 Acetyltransferase (GNAT) domain A6J62_12780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A6J62_12785 PF03806 AbgT putative transporter family A6J62_12790 PF00444 Ribosomal protein L36 A6J62_12795 PF01197 Ribosomal protein L31 A6J62_12800 PF18389 TrmO C-terminal domain A6J62_12800 PF01980 tRNA-methyltransferase O A6J62_12805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6J62_12805 PF03129 Anticodon binding domain A6J62_12805 PF04073 Aminoacyl-tRNA editing domain A6J62_12820 PF06786 Uncharacterised protein family (UPF0253) A6J62_12830 PF01797 Transposase IS200 like A6J62_12835 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A6J62_12835 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A6J62_12835 PF02769 AIR synthase related protein, C-terminal domain A6J62_12845 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_12845 PF01464 Transglycosylase SLT domain A6J62_12850 PF14437 MafB19-like deaminase A6J62_12855 PF03806 AbgT putative transporter family A6J62_12880 PF07963 Prokaryotic N-terminal methylation motif A6J62_12880 PF14245 Type IV pilin PilA A6J62_12885 PF00114 Pilin (bacterial filament) A6J62_12885 PF07963 Prokaryotic N-terminal methylation motif A6J62_12890 PF00226 DnaJ domain A6J62_12890 PF01556 DnaJ C terminal domain A6J62_12890 PF00684 DnaJ central domain A6J62_12895 PF00012 Hsp70 protein A6J62_12900 PF01025 GrpE A6J62_12905 PF01513 ATP-NAD kinase A6J62_12910 PF02463 RecF/RecN/SMC N terminal domain A6J62_12915 PF04355 SmpA / OmlA family A6J62_12920 PF03658 RnfH family Ubiquitin A6J62_12925 PF03364 Polyketide cyclase / dehydrase and lipid transport A6J62_12930 PF01668 SmpB protein A6J62_12940 PF13356 Arm DNA-binding domain A6J62_12940 PF00589 Phage integrase family A6J62_12955 PF13356 Arm DNA-binding domain A6J62_12955 PF00589 Phage integrase family A6J62_12960 PF13402 Peptidase M60, enhancin and enhancin-like A6J62_12960 PF17291 N-terminal domain of M60-like peptidases A6J62_12960 PF13322 Domain of unknown function (DUF4092) A6J62_12970 PF01551 Peptidase family M23 A6J62_12970 PF04225 Opacity-associated protein A LysM-like domain A6J62_12985 PF02743 Cache domain A6J62_12985 PF00672 HAMP domain A6J62_12985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_12990 PF01478 Type IV leader peptidase family A6J62_12990 PF06750 Bacterial Peptidase A24 N-terminal domain A6J62_12995 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family A6J62_13000 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F A6J62_13005 PF00482 Type II secretion system (T2SS), protein F A6J62_13010 PF00437 Type II/IV secretion system protein A6J62_13015 PF17456 Toxin-coregulated pilus protein S A6J62_13035 PF10671 Toxin co-regulated pilus biosynthesis protein Q A6J62_13045 PF07963 Prokaryotic N-terminal methylation motif A6J62_13045 PF05946 Toxin-coregulated pilus subunit TcpA A6J62_13055 PF00486 Transcriptional regulatory protein, C terminal A6J62_13060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_13065 PF08534 Redoxin A6J62_13090 PF00041 Fibronectin type III domain A6J62_13090 PF12561 ToxR activated gene A lipoprotein domain A6J62_13095 PF00171 Aldehyde dehydrogenase family A6J62_13165 PF00037 4Fe-4S binding domain A6J62_13165 PF11953 Domain of unknown function (DUF3470) A6J62_13170 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6J62_13170 PF00588 SpoU rRNA Methylase family A6J62_13180 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A6J62_13185 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase A6J62_13190 PF04223 Citrate lyase, alpha subunit (CitF) A6J62_13195 PF03328 HpcH/HpaI aldolase/citrate lyase family A6J62_13200 PF06857 Malonate decarboxylase delta subunit (MdcD) A6J62_13205 PF08218 Citrate lyase ligase C-terminal domain A6J62_13210 PF03390 2-hydroxycarboxylate transporter family A6J62_13215 PF04277 Oxaloacetate decarboxylase, gamma chain A6J62_13220 PF02436 Conserved carboxylase domain A6J62_13220 PF00682 HMGL-like A6J62_13220 PF00364 Biotin-requiring enzyme A6J62_13225 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A6J62_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_13230 PF17203 Single cache domain 3 A6J62_13235 PF12431 Transcriptional regulator A6J62_13235 PF00072 Response regulator receiver domain A6J62_13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_13250 PF03466 LysR substrate binding domain A6J62_13255 PF01266 FAD dependent oxidoreductase A6J62_13260 PF01235 Sodium:alanine symporter family A6J62_13265 PF00753 Metallo-beta-lactamase superfamily A6J62_13265 PF14864 Alkyl sulfatase C-terminal A6J62_13265 PF14863 Alkyl sulfatase dimerisation A6J62_13270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_13270 PF03466 LysR substrate binding domain A6J62_13275 PF01648 4'-phosphopantetheinyl transferase superfamily A6J62_13275 PF17837 4'-phosphopantetheinyl transferase N-terminal domain A6J62_13280 PF00005 ABC transporter A6J62_13285 PF01032 FecCD transport family A6J62_13290 PF01032 FecCD transport family A6J62_13295 PF01497 Periplasmic binding protein A6J62_13310 PF00425 chorismate binding enzyme A6J62_13315 PF13193 AMP-binding enzyme C-terminal domain A6J62_13315 PF00501 AMP-binding enzyme A6J62_13320 PF00857 Isochorismatase family A6J62_13320 PF00550 Phosphopantetheine attachment site A6J62_13325 PF01184 GPR1/FUN34/yaaH family A6J62_13330 PF06483 Chitinase C A6J62_13330 PF00704 Glycosyl hydrolases family 18 A6J62_13335 PF00117 Glutamine amidotransferase class-I A6J62_13335 PF00958 GMP synthase C terminal domain A6J62_13335 PF02540 NAD synthase A6J62_13340 PF00478 IMP dehydrogenase / GMP reductase domain A6J62_13340 PF00571 CBS domain A6J62_13345 PF13742 OB-fold nucleic acid binding domain A6J62_13345 PF02601 Exonuclease VII, large subunit A6J62_13360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A6J62_13360 PF01926 50S ribosome-binding GTPase A6J62_13365 PF13360 PQQ-like domain A6J62_13370 PF09976 Tetratricopeptide repeat-like domain A6J62_13375 PF13393 Histidyl-tRNA synthetase A6J62_13375 PF03129 Anticodon binding domain A6J62_13380 PF04551 GcpE protein A6J62_13385 PF13464 Domain of unknown function (DUF4115) A6J62_13390 PF04055 Radical SAM superfamily A6J62_13395 PF00334 Nucleoside diphosphate kinase A6J62_13400 PF12404 Peptidase A6J62_13400 PF00883 Cytosol aminopeptidase family, catalytic domain A6J62_13405 PF04384 Iron-sulphur cluster assembly A6J62_13410 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J62_13415 PF00012 Hsp70 protein A6J62_13420 PF07743 HSCB C-terminal oligomerisation domain A6J62_13420 PF00226 DnaJ domain A6J62_13425 PF01521 Iron-sulphur cluster biosynthesis A6J62_13430 PF01592 NifU-like N terminal domain A6J62_13435 PF00266 Aminotransferase class-V A6J62_13440 PF02082 Transcriptional regulator A6J62_13445 PF00588 SpoU rRNA Methylase family A6J62_13450 PF00459 Inositol monophosphatase family A6J62_13455 PF02355 Protein export membrane protein A6J62_13455 PF07549 SecD/SecF GG Motif A6J62_13460 PF13721 SecD export protein N-terminal TM region A6J62_13460 PF02355 Protein export membrane protein A6J62_13460 PF07549 SecD/SecF GG Motif A6J62_13465 PF02699 Preprotein translocase subunit A6J62_13470 PF01702 Queuine tRNA-ribosyltransferase A6J62_13480 PF02547 Queuosine biosynthesis protein A6J62_13485 PF00571 CBS domain A6J62_13490 PF00463 Isocitrate lyase family A6J62_13495 PF01274 Malate synthase A6J62_13500 PF03466 LysR substrate binding domain A6J62_13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_13505 PF10417 C-terminal domain of 1-Cys peroxiredoxin A6J62_13505 PF00578 AhpC/TSA family A6J62_13510 PF03932 CutC family A6J62_13515 PF03976 Polyphosphate kinase 2 (PPK2) A6J62_13520 PF01895 PhoU domain A6J62_13525 PF00005 ABC transporter A6J62_13530 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_13535 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_13540 PF13089 Polyphosphate kinase N-terminal domain A6J62_13540 PF02503 Polyphosphate kinase middle domain A6J62_13540 PF13090 Polyphosphate kinase C-terminal domain 2 A6J62_13540 PF17941 Polyphosphate kinase C-terminal domain 1 A6J62_13545 PF02541 Ppx/GppA phosphatase family A6J62_13550 PF12849 PBP superfamily domain A6J62_13555 PF11808 Phosphate regulon sensor protein PhoR A6J62_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_13555 PF00989 PAS fold A6J62_13555 PF00512 His Kinase A (phospho-acceptor) domain A6J62_13560 PF00486 Transcriptional regulatory protein, C terminal A6J62_13560 PF00072 Response regulator receiver domain A6J62_13565 PF04381 Putative exonuclease, RdgC A6J62_13575 PF00037 4Fe-4S binding domain A6J62_13580 PF00881 Nitroreductase family A6J62_13620 PF17871 AAA lid domain A6J62_13620 PF07724 AAA domain (Cdc48 subfamily) A6J62_13620 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_13620 PF10431 C-terminal, D2-small domain, of ClpB protein A6J62_13620 PF02861 Clp amino terminal domain, pathogenicity island component A6J62_13630 PF00849 RNA pseudouridylate synthase A6J62_13630 PF01479 S4 domain A6J62_13635 PF13525 Outer membrane lipoprotein A6J62_13640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6J62_13645 PF00800 Prephenate dehydratase A6J62_13645 PF01817 Chorismate mutase type II A6J62_13650 PF13416 Bacterial extracellular solute-binding protein A6J62_13655 PF00563 EAL domain A6J62_13655 PF00990 Diguanylate cyclase, GGDEF domain A6J62_13660 PF01931 Protein of unknown function DUF84 A6J62_13665 PF01371 Trp repressor protein A6J62_13670 PF14718 Soluble lytic murein transglycosylase L domain A6J62_13670 PF01464 Transglycosylase SLT domain A6J62_13675 PF00005 ABC transporter A6J62_13675 PF12848 ABC transporter A6J62_13680 PF07238 PilZ domain A6J62_13685 PF01817 Chorismate mutase type II A6J62_13685 PF02153 Prephenate dehydrogenase A6J62_13690 PF00793 DAHP synthetase I family A6J62_13695 PF06580 Histidine kinase A6J62_13695 PF07694 5TMR of 5TMR-LYT A6J62_13700 PF04397 LytTr DNA-binding domain A6J62_13700 PF00072 Response regulator receiver domain A6J62_13705 PF00933 Glycosyl hydrolase family 3 N terminal domain A6J62_13710 PF03702 Anhydro-N-acetylmuramic acid kinase A6J62_13715 PF13580 SIS domain A6J62_13730 PF02554 Carbon starvation protein CstA A6J62_13735 PF02401 LytB protein A6J62_13740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J62_13745 PF01252 Signal peptidase (SPase) II A6J62_13750 PF06827 Zinc finger found in FPG and IleRS A6J62_13750 PF08264 Anticodon-binding domain of tRNA A6J62_13750 PF00133 tRNA synthetases class I (I, L, M and V) A6J62_13755 PF01687 Riboflavin kinase A6J62_13755 PF06574 FAD synthetase A6J62_13760 PF03023 Lipid II flippase MurJ A6J62_13765 PF01649 Ribosomal protein S20 A6J62_13770 PF01022 Bacterial regulatory protein, arsR family A6J62_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_13775 PF03466 LysR substrate binding domain A6J62_13780 PF02690 Na+/Pi-cotransporter A6J62_13785 PF00303 Thymidylate synthase A6J62_13790 PF01790 Prolipoprotein diacylglyceryl transferase A6J62_13795 PF01925 Sulfite exporter TauE/SafE A6J62_13800 PF05524 PEP-utilising enzyme, N-terminal A6J62_13800 PF01590 GAF domain A6J62_13800 PF02896 PEP-utilising enzyme, TIM barrel domain A6J62_13800 PF00391 PEP-utilising enzyme, mobile domain A6J62_13805 PF00293 NUDIX domain A6J62_13810 PF02976 DNA mismatch repair enzyme MutH A6J62_13815 PF00248 Aldo/keto reductase family A6J62_13825 PF02954 Bacterial regulatory protein, Fis family A6J62_13825 PF00072 Response regulator receiver domain A6J62_13825 PF00158 Sigma-54 interaction domain A6J62_13830 PF01336 OB-fold nucleic acid binding domain A6J62_13830 PF00152 tRNA synthetases class II (D, K and N) A6J62_13840 PF05525 Branched-chain amino acid transport protein A6J62_13845 PF05175 Methyltransferase small domain A6J62_13850 PF00270 DEAD/DEAH box helicase A6J62_13850 PF00271 Helicase conserved C-terminal domain A6J62_13855 PF00009 Elongation factor Tu GTP binding domain A6J62_13855 PF03144 Elongation factor Tu domain 2 A6J62_13855 PF16658 Class II release factor RF3, C-terminal domain A6J62_13860 PF00563 EAL domain A6J62_13860 PF03707 Bacterial signalling protein N terminal repeat A6J62_13860 PF00990 Diguanylate cyclase, GGDEF domain A6J62_13875 PF13508 Acetyltransferase (GNAT) domain A6J62_13885 PF00990 Diguanylate cyclase, GGDEF domain A6J62_13885 PF00563 EAL domain A6J62_13885 PF03707 Bacterial signalling protein N terminal repeat A6J62_13910 PF13181 Tetratricopeptide repeat A6J62_13910 PF07719 Tetratricopeptide repeat A6J62_13915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A6J62_13915 PF01138 3' exoribonuclease family, domain 1 A6J62_13915 PF03725 3' exoribonuclease family, domain 2 A6J62_13915 PF00575 S1 RNA binding domain A6J62_13915 PF00013 KH domain A6J62_13920 PF00312 Ribosomal protein S15 A6J62_13925 PF01509 TruB family pseudouridylate synthase (N terminal domain) A6J62_13925 PF09157 Pseudouridine synthase II TruB, C-terminal A6J62_13925 PF16198 tRNA pseudouridylate synthase B C-terminal domain A6J62_13930 PF02033 Ribosome-binding factor A A6J62_13935 PF11987 Translation-initiation factor 2 A6J62_13935 PF08364 Bacterial translation initiation factor IF-2 associated region A6J62_13935 PF04760 Translation initiation factor IF-2, N-terminal region A6J62_13935 PF00009 Elongation factor Tu GTP binding domain A6J62_13940 PF08529 NusA N-terminal domain A6J62_13940 PF00575 S1 RNA binding domain A6J62_13940 PF13184 NusA-like KH domain A6J62_13945 PF02576 RimP N-terminal domain A6J62_13945 PF17384 RimP C-terminal SH3 domain A6J62_13960 PF03840 Preprotein translocase SecG subunit A6J62_13970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J62_13970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J62_13970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J62_13970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J62_13975 PF00809 Pterin binding enzyme A6J62_13980 PF06480 FtsH Extracellular A6J62_13980 PF17862 AAA+ lid domain A6J62_13980 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_13980 PF01434 Peptidase family M41 A6J62_13985 PF01728 FtsJ-like methyltransferase A6J62_13990 PF01985 CRS1 / YhbY (CRM) domain A6J62_13995 PF03449 Transcription elongation factor, N-terminal A6J62_13995 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J62_14000 PF13609 Gram-negative porin A6J62_14005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A6J62_14010 PF00579 tRNA synthetases class I (W and Y) A6J62_14010 PF01479 S4 domain A6J62_14015 PF04225 Opacity-associated protein A LysM-like domain A6J62_14015 PF01551 Peptidase family M23 A6J62_14020 PF00873 AcrB/AcrD/AcrF family A6J62_14030 PF01521 Iron-sulphur cluster biosynthesis A6J62_14035 PF00202 Aminotransferase class-III A6J62_14040 PF01594 AI-2E family transporter A6J62_14045 PF08468 Methyltransferase small domain N-terminal A6J62_14045 PF05175 Methyltransferase small domain A6J62_14050 PF00072 Response regulator receiver domain A6J62_14050 PF09308 LuxQ, periplasmic A6J62_14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_14050 PF00512 His Kinase A (phospho-acceptor) domain A6J62_14060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_14065 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_14070 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_14070 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J62_14075 PF00005 ABC transporter A6J62_14075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_14080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_14080 PF00005 ABC transporter A6J62_14090 PF01869 BadF/BadG/BcrA/BcrD ATPase family A6J62_14095 PF00728 Glycosyl hydrolase family 20, catalytic domain A6J62_14095 PF02838 Glycosyl hydrolase family 20, domain 2 A6J62_14100 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A6J62_14100 PF06165 Glycosyltransferase family 36 A6J62_14105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J62_14105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J62_14105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J62_14105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J62_14110 PF00005 ABC transporter A6J62_14110 PF08402 TOBE domain A6J62_14120 PF13416 Bacterial extracellular solute-binding protein A6J62_14125 PF00909 Ammonium Transporter Family A6J62_14130 PF00543 Nitrogen regulatory protein P-II A6J62_14135 PF06062 Uncharacterised protein family (UPF0231) A6J62_14140 PF06434 Aconitate hydratase 2 N-terminus A6J62_14140 PF00330 Aconitase family (aconitate hydratase) A6J62_14140 PF11791 Aconitate B N-terminal domain A6J62_14145 PF01734 Patatin-like phospholipase A6J62_14150 PF00912 Transglycosylase A6J62_14150 PF14814 Bifunctional transglycosylase second domain A6J62_14150 PF00905 Penicillin binding protein transpeptidase domain A6J62_14155 PF08482 ATP-dependent helicase C-terminal A6J62_14155 PF00271 Helicase conserved C-terminal domain A6J62_14155 PF04408 Helicase associated domain (HA2) A6J62_14155 PF00270 DEAD/DEAH box helicase A6J62_14165 PF03749 Sugar fermentation stimulation protein RE domain A6J62_14165 PF17746 SfsA N-terminal OB domain A6J62_14170 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6J62_14175 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6J62_14180 PF12626 Polymerase A arginine-rich C-terminus A6J62_14180 PF01743 Poly A polymerase head domain A6J62_14180 PF12627 Probable RNA and SrmB- binding site of polymerase A A6J62_14185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6J62_14190 PF02548 Ketopantoate hydroxymethyltransferase A6J62_14195 PF02569 Pantoate-beta-alanine ligase A6J62_14200 PF01061 ABC-2 type transporter A6J62_14205 PF00005 ABC transporter A6J62_14210 PF00916 Sulfate permease family A6J62_14210 PF01740 STAS domain A6J62_14215 PF00484 Carbonic anhydrase A6J62_14220 PF00156 Phosphoribosyl transferase domain A6J62_14235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J62_14240 PF04348 LppC putative lipoprotein A6J62_14245 PF02021 Uncharacterised protein family UPF0102 A6J62_14250 PF13580 SIS domain A6J62_14255 PF04972 BON domain A6J62_14260 PF04386 Stringent starvation protein B A6J62_14265 PF02798 Glutathione S-transferase, N-terminal domain A6J62_14265 PF00043 Glutathione S-transferase, C-terminal domain A6J62_14270 PF02167 Cytochrome C1 family A6J62_14275 PF00032 Cytochrome b(C-terminal)/b6/petD A6J62_14275 PF00033 Cytochrome b/b6/petB A6J62_14280 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A6J62_14280 PF00355 Rieske [2Fe-2S] domain A6J62_14285 PF00380 Ribosomal protein S9/S16 A6J62_14290 PF00572 Ribosomal protein L13 A6J62_14295 PF03969 AFG1-like ATPase A6J62_14305 PF00595 PDZ domain A6J62_14310 PF13180 PDZ domain A6J62_14315 PF01245 Ribosomal protein L19 A6J62_14320 PF01746 tRNA (Guanine-1)-methyltransferase A6J62_14325 PF01782 RimM N-terminal domain A6J62_14325 PF05239 PRC-barrel domain A6J62_14330 PF00886 Ribosomal protein S16 A6J62_14335 PF02881 SRP54-type protein, helical bundle domain A6J62_14335 PF00448 SRP54-type protein, GTPase domain A6J62_14335 PF02978 Signal peptide binding domain A6J62_14340 PF01578 Cytochrome C assembly protein A6J62_14345 PF03471 Transporter associated domain A6J62_14345 PF00571 CBS domain A6J62_14345 PF01595 Cyclin M transmembrane N-terminal domain A6J62_14350 PF02664 S-Ribosylhomocysteinase (LuxS) A6J62_14355 PF04262 Glutamate-cysteine ligase A6J62_14360 PF00675 Insulinase (Peptidase family M16) A6J62_14360 PF05193 Peptidase M16 inactive domain A6J62_14365 PF09335 SNARE associated Golgi protein A6J62_14375 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A6J62_14380 PF00364 Biotin-requiring enzyme A6J62_14380 PF02436 Conserved carboxylase domain A6J62_14380 PF00682 HMGL-like A6J62_14385 PF04277 Oxaloacetate decarboxylase, gamma chain A6J62_14430 PF02599 Global regulator protein family A6J62_14435 PF00696 Amino acid kinase family A6J62_14435 PF13840 ACT domain A6J62_14435 PF01842 ACT domain A6J62_14440 PF02272 DHHA1 domain A6J62_14440 PF01411 tRNA synthetases class II (A) A6J62_14440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6J62_14445 PF02631 RecX family A6J62_14450 PF00154 recA bacterial DNA recombination protein A6J62_14455 PF02464 Competence-damaged protein A6J62_14460 PF12857 TOBE-like domain A6J62_14460 PF00005 ABC transporter A6J62_14465 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_14470 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_14480 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_14485 PF05192 MutS domain III A6J62_14485 PF01624 MutS domain I A6J62_14485 PF05188 MutS domain II A6J62_14485 PF05190 MutS family domain IV A6J62_14485 PF00488 MutS domain V A6J62_14490 PF04539 Sigma-70 region 3 A6J62_14490 PF04542 Sigma-70 region 2 A6J62_14490 PF04545 Sigma-70, region 4 A6J62_14490 PF00140 Sigma-70 factor, region 1.2 A6J62_14495 PF01551 Peptidase family M23 A6J62_14495 PF01476 LysM domain A6J62_14505 PF01975 Survival protein SurE A6J62_14510 PF01142 tRNA pseudouridine synthase D (TruD) A6J62_14515 PF02542 YgbB family A6J62_14520 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A6J62_14525 PF04977 Septum formation initiator A6J62_14530 PF02673 Bacitracin resistance protein BacA A6J62_14535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6J62_14540 PF02152 Dihydroneopterin aldolase A6J62_14550 PF02660 Glycerol-3-phosphate acyltransferase A6J62_14555 PF00561 alpha/beta hydrolase fold A6J62_14560 PF00814 Glycoprotease family A6J62_14565 PF01165 Ribosomal protein S21 A6J62_14570 PF09424 Yqey-like protein A6J62_14575 PF10410 DnaB-helicase binding domain of primase A6J62_14575 PF01807 CHC2 zinc finger A6J62_14575 PF08275 DNA primase catalytic core, N-terminal domain A6J62_14575 PF08278 DNA primase DnaG DnaB-binding A6J62_14580 PF00140 Sigma-70 factor, region 1.2 A6J62_14580 PF03979 Sigma-70 factor, region 1.1 A6J62_14580 PF04539 Sigma-70 region 3 A6J62_14580 PF04545 Sigma-70, region 4 A6J62_14580 PF04542 Sigma-70 region 2 A6J62_14580 PF04546 Sigma-70, non-essential region A6J62_14590 PF13356 Arm DNA-binding domain A6J62_14590 PF00589 Phage integrase family A6J62_14595 PF08668 HDOD domain A6J62_14595 PF00563 EAL domain A6J62_14600 PF00672 HAMP domain A6J62_14600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_14600 PF17200 Single Cache domain 2 A6J62_14605 PF12833 Helix-turn-helix domain A6J62_14610 PF08447 PAS fold A6J62_14610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_14620 PF04002 RadC-like JAB domain A6J62_14655 PF08525 Opacity-associated protein A N-terminal motif A6J62_14655 PF01551 Peptidase family M23 A6J62_14655 PF01476 LysM domain A6J62_14665 PF07963 Prokaryotic N-terminal methylation motif A6J62_14665 PF00114 Pilin (bacterial filament) A6J62_14680 PF00075 RNase H A6J62_14730 PF03480 Bacterial extracellular solute-binding protein, family 7 A6J62_14735 PF01380 SIS domain A6J62_14740 PF00455 DeoR C terminal sensor domain A6J62_14740 PF08220 DeoR-like helix-turn-helix domain A6J62_14745 PF00224 Pyruvate kinase, barrel domain A6J62_14745 PF02887 Pyruvate kinase, alpha/beta domain A6J62_14750 PF04402 Protein of unknown function (DUF541) A6J62_14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_14755 PF03466 LysR substrate binding domain A6J62_14760 PF01810 LysE type translocator A6J62_14765 PF05552 Conserved TM helix A6J62_14765 PF00924 Mechanosensitive ion channel A6J62_14775 PF01116 Fructose-bisphosphate aldolase class-II A6J62_14780 PF00162 Phosphoglycerate kinase A6J62_14785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6J62_14785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6J62_14790 PF00593 TonB dependent receptor A6J62_14790 PF07715 TonB-dependent Receptor Plug Domain A6J62_14795 PF03466 LysR substrate binding domain A6J62_14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_14800 PF02779 Transketolase, pyrimidine binding domain A6J62_14800 PF02780 Transketolase, C-terminal domain A6J62_14800 PF00456 Transketolase, thiamine diphosphate binding domain A6J62_14805 PF00438 S-adenosylmethionine synthetase, N-terminal domain A6J62_14805 PF02772 S-adenosylmethionine synthetase, central domain A6J62_14805 PF02773 S-adenosylmethionine synthetase, C-terminal domain A6J62_14810 PF17283 SprT-like zinc ribbon domain A6J62_14810 PF10263 SprT-like family A6J62_14815 PF04231 Endonuclease I A6J62_14820 PF04452 RNA methyltransferase A6J62_14825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A6J62_14825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A6J62_14830 PF02622 Uncharacterized ACR, COG1678 A6J62_14835 PF03652 Holliday junction resolvase A6J62_14840 PF01479 S4 domain A6J62_14840 PF00579 tRNA synthetases class I (W and Y) A6J62_14850 PF00437 Type II/IV secretion system protein A6J62_14855 PF00437 Type II/IV secretion system protein A6J62_14860 PF01168 Alanine racemase, N-terminal domain A6J62_14865 PF03807 NADP oxidoreductase coenzyme F420-dependent A6J62_14865 PF14748 Pyrroline-5-carboxylate reductase dimerisation A6J62_14870 PF02325 YGGT family A6J62_14875 PF02594 Uncharacterised ACR, YggU family COG1872 A6J62_14885 PF01725 Ham1 family A6J62_14890 PF06969 HemN C-terminal domain A6J62_14890 PF04055 Radical SAM superfamily A6J62_14895 PF04960 Glutaminase A6J62_14900 PF02390 Putative methyltransferase A6J62_14905 PF14815 NUDIX domain A6J62_14905 PF10576 Iron-sulfur binding domain of endonuclease III A6J62_14905 PF00633 Helix-hairpin-helix motif A6J62_14905 PF00730 HhH-GPD superfamily base excision DNA repair protein A6J62_14910 PF04362 Bacterial Fe(2+) trafficking A6J62_14915 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain A6J62_14915 PF01464 Transglycosylase SLT domain A6J62_14940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_14940 PF00672 HAMP domain A6J62_14940 PF12729 Four helix bundle sensory module for signal transduction A6J62_14970 PF00226 DnaJ domain A6J62_14970 PF05099 Tellurite resistance protein TerB A6J62_14975 PF03968 OstA-like protein A6J62_14975 PF04453 LPS transport system D A6J62_14980 PF09312 SurA N-terminal domain A6J62_14985 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A6J62_14990 PF00398 Ribosomal RNA adenine dimethylase A6J62_14995 PF04379 ApaG domain A6J62_15000 PF00149 Calcineurin-like phosphoesterase A6J62_15005 PF00186 Dihydrofolate reductase A6J62_15010 PF12821 Threonine/Serine exporter, ThrE A6J62_15015 PF06738 Putative threonine/serine exporter A6J62_15020 PF01926 50S ribosome-binding GTPase A6J62_15020 PF01018 GTP1/OBG A6J62_15025 PF01016 Ribosomal L27 protein A6J62_15030 PF00829 Ribosomal prokaryotic L21 protein A6J62_15035 PF00348 Polyprenyl synthetase A6J62_15040 PF13520 Amino acid permease A6J62_15045 PF00056 lactate/malate dehydrogenase, NAD binding domain A6J62_15045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A6J62_15050 PF02863 Arginine repressor, C-terminal domain A6J62_15050 PF01316 Arginine repressor, DNA binding domain A6J62_15060 PF16868 NMT1-like family A6J62_15070 PF00582 Universal stress protein family A6J62_15085 PF06877 Regulator of ribonuclease activity B A6J62_15095 PF01523 Putative modulator of DNA gyrase A6J62_15100 PF00795 Carbon-nitrogen hydrolase A6J62_15105 PF13116 Protein of unknown function A6J62_15105 PF13502 AsmA-like C-terminal region A6J62_15110 PF00575 S1 RNA binding domain A6J62_15110 PF10150 Ribonuclease E/G family A6J62_15115 PF02545 Maf-like protein A6J62_15120 PF04093 rod shape-determining protein MreD A6J62_15125 PF04085 rod shape-determining protein MreC A6J62_15160 PF00114 Pilin (bacterial filament) A6J62_15160 PF07963 Prokaryotic N-terminal methylation motif A6J62_15165 PF00114 Pilin (bacterial filament) A6J62_15165 PF07963 Prokaryotic N-terminal methylation motif A6J62_15175 PF00482 Type II secretion system (T2SS), protein F A6J62_15180 PF00437 Type II/IV secretion system protein A6J62_15190 PF13401 AAA domain A6J62_15190 PF01471 Putative peptidoglycan binding domain A6J62_15195 PF07660 Secretin and TonB N terminus short domain A6J62_15195 PF03958 Bacterial type II/III secretion system short domain A6J62_15195 PF00263 Bacterial type II and III secretion system protein A6J62_15195 PF11741 AMIN domain A6J62_15215 PF17157 Gammaproteobacterial periplasmic sensor domain A6J62_15215 PF00990 Diguanylate cyclase, GGDEF domain A6J62_15215 PF00563 EAL domain A6J62_15220 PF00436 Single-strand binding protein family A6J62_15225 PF00196 Bacterial regulatory proteins, luxR family A6J62_15230 PF00483 Nucleotidyl transferase A6J62_15235 PF00005 ABC transporter A6J62_15235 PF17755 UvrA DNA-binding domain A6J62_15235 PF17760 UvrA interaction domain A6J62_15245 PF00266 Aminotransferase class-V A6J62_15250 PF00696 Amino acid kinase family A6J62_15250 PF01842 ACT domain A6J62_15255 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6J62_15255 PF02574 Homocysteine S-methyltransferase A6J62_15255 PF00809 Pterin binding enzyme A6J62_15255 PF02310 B12 binding domain A6J62_15255 PF02607 B12 binding domain A6J62_15260 PF00999 Sodium/hydrogen exchanger family A6J62_15330 PF01507 Phosphoadenosine phosphosulfate reductase family A6J62_15335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6J62_15335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6J62_15340 PF00175 Oxidoreductase NAD-binding domain A6J62_15340 PF00258 Flavodoxin A6J62_15340 PF00667 FAD binding domain A6J62_15360 PF09583 Phage shock protein G (Phageshock_PspG) A6J62_15365 PF01207 Dihydrouridine synthase (Dus) A6J62_15370 PF01475 Ferric uptake regulator family A6J62_15380 PF12706 Beta-lactamase superfamily domain A6J62_15385 PF00342 Phosphoglucose isomerase A6J62_15390 PF01894 Uncharacterised protein family UPF0047 A6J62_15395 PF01168 Alanine racemase, N-terminal domain A6J62_15395 PF00842 Alanine racemase, C-terminal domain A6J62_15400 PF00772 DnaB-like helicase N terminal domain A6J62_15400 PF03796 DnaB-like helicase C terminal domain A6J62_15410 PF03948 Ribosomal protein L9, C-terminal domain A6J62_15410 PF01281 Ribosomal protein L9, N-terminal domain A6J62_15415 PF01084 Ribosomal protein S18 A6J62_15420 PF00436 Single-strand binding protein family A6J62_15425 PF01250 Ribosomal protein S6 A6J62_15430 PF00210 Ferritin-like domain A6J62_15435 PF04324 BFD-like [2Fe-2S] binding domain A6J62_15440 PF00009 Elongation factor Tu GTP binding domain A6J62_15440 PF03144 Elongation factor Tu domain 2 A6J62_15440 PF03143 Elongation factor Tu C-terminal domain A6J62_15445 PF00679 Elongation factor G C-terminus A6J62_15445 PF14492 Elongation Factor G, domain II A6J62_15445 PF00009 Elongation factor Tu GTP binding domain A6J62_15445 PF03144 Elongation factor Tu domain 2 A6J62_15445 PF03764 Elongation factor G, domain IV A6J62_15450 PF00177 Ribosomal protein S7p/S5e A6J62_15455 PF00164 Ribosomal protein S12/S23 A6J62_15465 PF02635 DsrE/DsrF-like family A6J62_15470 PF02635 DsrE/DsrF-like family A6J62_15475 PF13309 HTH domain A6J62_15475 PF08348 YheO-like PAS domain A6J62_15480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6J62_15480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J62_15490 PF04102 SlyX A6J62_15495 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) A6J62_15500 PF01145 SPFH domain / Band 7 family A6J62_15505 PF01145 SPFH domain / Band 7 family A6J62_15505 PF12221 Bacterial membrane protein N terminal A6J62_15510 PF16360 GTP-binding GTPase Middle Region A6J62_15510 PF13167 GTP-binding GTPase N-terminal A6J62_15510 PF01926 50S ribosome-binding GTPase A6J62_15515 PF17209 Hfq protein A6J62_15525 PF08676 MutL C terminal dimerisation domain A6J62_15525 PF01119 DNA mismatch repair protein, C-terminal domain A6J62_15530 PF01520 N-acetylmuramoyl-L-alanine amidase A6J62_15535 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A6J62_15540 PF08331 Domain of unknown function (DUF1730) A6J62_15585 PF00929 Exonuclease A6J62_15590 PF03193 RsgA GTPase A6J62_15595 PF02666 Phosphatidylserine decarboxylase A6J62_15600 PF02080 TrkA-C domain A6J62_15600 PF03600 Citrate transporter A6J62_15610 PF01676 Metalloenzyme superfamily A6J62_15610 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A6J62_15615 PF01551 Peptidase family M23 A6J62_15625 PF08360 QacR-like protein, C-terminal region A6J62_15625 PF00440 Bacterial regulatory proteins, tetR family A6J62_15630 PF01208 Uroporphyrinogen decarboxylase (URO-D) A6J62_15635 PF09297 NADH pyrophosphatase zinc ribbon domain A6J62_15635 PF00293 NUDIX domain A6J62_15640 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ A6J62_15645 PF04998 RNA polymerase Rpb1, domain 5 A6J62_15645 PF04983 RNA polymerase Rpb1, domain 3 A6J62_15645 PF04997 RNA polymerase Rpb1, domain 1 A6J62_15645 PF00623 RNA polymerase Rpb1, domain 2 A6J62_15645 PF05000 RNA polymerase Rpb1, domain 4 A6J62_15650 PF04565 RNA polymerase Rpb2, domain 3 A6J62_15650 PF04561 RNA polymerase Rpb2, domain 2 A6J62_15650 PF00562 RNA polymerase Rpb2, domain 6 A6J62_15650 PF10385 RNA polymerase beta subunit external 1 domain A6J62_15650 PF04560 RNA polymerase Rpb2, domain 7 A6J62_15650 PF04563 RNA polymerase beta subunit A6J62_15655 PF16320 Ribosomal protein L7/L12 dimerisation domain A6J62_15655 PF00542 Ribosomal protein L7/L12 C-terminal domain A6J62_15660 PF00466 Ribosomal protein L10 A6J62_15665 PF00687 Ribosomal protein L1p/L10e family A6J62_15670 PF03946 Ribosomal protein L11, N-terminal domain A6J62_15670 PF00298 Ribosomal protein L11, RNA binding domain A6J62_15675 PF02357 Transcription termination factor nusG A6J62_15675 PF00467 KOW motif A6J62_15680 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A6J62_15685 PF03144 Elongation factor Tu domain 2 A6J62_15685 PF03143 Elongation factor Tu C-terminal domain A6J62_15685 PF00009 Elongation factor Tu GTP binding domain A6J62_15710 PF00485 Phosphoribulokinase / Uridine kinase family A6J62_15715 PF08279 HTH domain A6J62_15715 PF03099 Biotin/lipoate A/B protein ligase family A6J62_15715 PF02237 Biotin protein ligase C terminal domain A6J62_15720 PF01565 FAD binding domain A6J62_15720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A6J62_15730 PF13091 PLD-like domain A6J62_15770 PF00175 Oxidoreductase NAD-binding domain A6J62_15775 PF00970 Oxidoreductase FAD-binding domain A6J62_15775 PF00175 Oxidoreductase NAD-binding domain A6J62_15775 PF00111 2Fe-2S iron-sulfur cluster binding domain A6J62_15780 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A6J62_15790 PF07498 Rho termination factor, N-terminal domain A6J62_15790 PF07497 Rho termination factor, RNA-binding domain A6J62_15790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J62_15795 PF00085 Thioredoxin A6J62_15800 PF00271 Helicase conserved C-terminal domain A6J62_15800 PF00270 DEAD/DEAH box helicase A6J62_15805 PF02541 Ppx/GppA phosphatase family A6J62_15810 PF00072 Response regulator receiver domain A6J62_15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_15810 PF09456 RcsC Alpha-Beta-Loop (ABL) A6J62_15810 PF00512 His Kinase A (phospho-acceptor) domain A6J62_15815 PF12832 MFS_1 like family A6J62_15835 PF13193 AMP-binding enzyme C-terminal domain A6J62_15835 PF00501 AMP-binding enzyme A6J62_15835 PF16177 Acetyl-coenzyme A synthetase N-terminus A6J62_15840 PF01220 Dehydroquinase class II A6J62_15845 PF00364 Biotin-requiring enzyme A6J62_15850 PF00289 Biotin carboxylase, N-terminal domain A6J62_15850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6J62_15850 PF02785 Biotin carboxylase C-terminal domain A6J62_15860 PF01207 Dihydrouridine synthase (Dus) A6J62_15865 PF02954 Bacterial regulatory protein, Fis family A6J62_15870 PF00356 Bacterial regulatory proteins, lacI family A6J62_15870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6J62_15875 PF00920 Dehydratase family A6J62_15880 PF01202 Shikimate kinase A6J62_15885 PF02447 GntP family permease A6J62_15890 PF01081 KDPG and KHG aldolase A6J62_15895 PF07715 TonB-dependent Receptor Plug Domain A6J62_15895 PF00593 TonB dependent receptor A6J62_15910 PF00672 HAMP domain A6J62_15910 PF17200 Single Cache domain 2 A6J62_15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_15915 PF01276 Orn/Lys/Arg decarboxylase, major domain A6J62_15915 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain A6J62_15915 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A6J62_15920 PF13520 Amino acid permease A6J62_15925 PF18500 CadC C-terminal domain 1 A6J62_15925 PF00486 Transcriptional regulatory protein, C terminal A6J62_15930 PF13411 MerR HTH family regulatory protein A6J62_15940 PF01808 AICARFT/IMPCHase bienzyme A6J62_15940 PF02142 MGS-like domain A6J62_15945 PF02843 Phosphoribosylglycinamide synthetase, C domain A6J62_15945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A6J62_15945 PF02844 Phosphoribosylglycinamide synthetase, N domain A6J62_15955 PF00216 Bacterial DNA-binding protein A6J62_15960 PF01595 Cyclin M transmembrane N-terminal domain A6J62_15960 PF00571 CBS domain A6J62_15965 PF00480 ROK family A6J62_15970 PF01238 Phosphomannose isomerase type I A6J62_15975 PF04222 Protein of unknown function (DUF416) A6J62_15980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J62_15985 PF03167 Uracil DNA glycosylase superfamily A6J62_15990 PF00924 Mechanosensitive ion channel A6J62_15995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A6J62_15995 PF10996 Beta-Casp domain A6J62_15995 PF00753 Metallo-beta-lactamase superfamily A6J62_16000 PF02397 Bacterial sugar transferase A6J62_16005 PF01370 NAD dependent epimerase/dehydratase family A6J62_16010 PF02719 Polysaccharide biosynthesis protein A6J62_16040 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_16050 PF00171 Aldehyde dehydrogenase family A6J62_16050 PF00465 Iron-containing alcohol dehydrogenase A6J62_16055 PF00501 AMP-binding enzyme A6J62_16055 PF13193 AMP-binding enzyme C-terminal domain A6J62_16065 PF00005 ABC transporter A6J62_16065 PF14524 Wzt C-terminal domain A6J62_16080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6J62_16085 PF16363 GDP-mannose 4,6 dehydratase A6J62_16090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6J62_16090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6J62_16090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6J62_16090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6J62_16095 PF01050 Mannose-6-phosphate isomerase A6J62_16095 PF00483 Nucleotidyl transferase A6J62_16100 PF01370 NAD dependent epimerase/dehydratase family A6J62_16105 PF01522 Polysaccharide deacetylase A6J62_16105 PF00457 Glycosyl hydrolases family 11 A6J62_16120 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6J62_16130 PF04488 Glycosyltransferase sugar-binding region containing DXD motif A6J62_16135 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A6J62_16170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6J62_16175 PF00535 Glycosyl transferase family 2 A6J62_16180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6J62_16185 PF01467 Cytidylyltransferase-like A6J62_16190 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A6J62_16190 PF06827 Zinc finger found in FPG and IleRS A6J62_16190 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A6J62_16200 PF00471 Ribosomal protein L33 A6J62_16205 PF00830 Ribosomal L28 family A6J62_16210 PF04002 RadC-like JAB domain A6J62_16215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_16215 PF00672 HAMP domain A6J62_16220 PF02441 Flavoprotein A6J62_16220 PF04127 DNA / pantothenate metabolism flavoprotein A6J62_16230 PF00440 Bacterial regulatory proteins, tetR family A6J62_16235 PF03279 Bacterial lipid A biosynthesis acyltransferase A6J62_16240 PF03279 Bacterial lipid A biosynthesis acyltransferase A6J62_16245 PF00156 Phosphoribosyl transferase domain A6J62_16250 PF01138 3' exoribonuclease family, domain 1 A6J62_16250 PF03725 3' exoribonuclease family, domain 2 A6J62_16255 PF03755 YicC-like family, N-terminal region A6J62_16255 PF08340 Domain of unknown function (DUF1732) A6J62_16260 PF03350 Uncharacterized protein family, UPF0114 A6J62_16265 PF00367 phosphotransferase system, EIIB A6J62_16265 PF02378 Phosphotransferase system, EIIC A6J62_16270 PF13580 SIS domain A6J62_16280 PF01380 SIS domain A6J62_16280 PF01418 Helix-turn-helix domain, rpiR family A6J62_16285 PF01032 FecCD transport family A6J62_16290 PF01497 Periplasmic binding protein A6J62_16295 PF00005 ABC transporter A6J62_16300 PF00593 TonB dependent receptor A6J62_16300 PF07715 TonB-dependent Receptor Plug Domain A6J62_16305 PF00664 ABC transporter transmembrane region A6J62_16305 PF00005 ABC transporter A6J62_16320 PF16124 RecQ zinc-binding A6J62_16320 PF00271 Helicase conserved C-terminal domain A6J62_16320 PF00570 HRDC domain A6J62_16320 PF00270 DEAD/DEAH box helicase A6J62_16320 PF09382 RQC domain A6J62_16325 PF00892 EamA-like transporter family A6J62_16335 PF12833 Helix-turn-helix domain A6J62_16340 PF01810 LysE type translocator A6J62_16345 PF00580 UvrD/REP helicase N-terminal domain A6J62_16345 PF13361 UvrD-like helicase C-terminal domain A6J62_16350 PF01432 Peptidase family M3 A6J62_16355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A6J62_16360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J62_16360 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_16425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6J62_16435 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_16435 PF12911 N-terminal TM domain of oligopeptide transport permease C A6J62_16445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6J62_16450 PF00005 ABC transporter A6J62_16450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6J62_16490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6J62_16495 PF13361 UvrD-like helicase C-terminal domain A6J62_16495 PF00580 UvrD/REP helicase N-terminal domain A6J62_16500 PF00440 Bacterial regulatory proteins, tetR family A6J62_16505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6J62_16510 PF00873 AcrB/AcrD/AcrF family A6J62_16515 PF04380 Membrane fusogenic activity A6J62_16520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A6J62_16520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A6J62_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_16525 PF03466 LysR substrate binding domain A6J62_16570 PF12724 Flavodoxin domain A6J62_16575 PF02386 Cation transport protein A6J62_16580 PF01205 Uncharacterized protein family UPF0029 A6J62_16580 PF09186 Domain of unknown function (DUF1949) A6J62_16585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6J62_16585 PF00378 Enoyl-CoA hydratase/isomerase A6J62_16585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6J62_16590 PF02803 Thiolase, C-terminal domain A6J62_16590 PF00108 Thiolase, N-terminal domain A6J62_16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_16595 PF03466 LysR substrate binding domain A6J62_16600 PF07690 Major Facilitator Superfamily A6J62_16605 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_16605 PF12804 MobA-like NTP transferase domain A6J62_16610 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A6J62_16610 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A6J62_16615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J62_16615 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6J62_16620 PF00231 ATP synthase A6J62_16625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6J62_16625 PF00306 ATP synthase alpha/beta chain, C terminal domain A6J62_16625 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6J62_16630 PF00213 ATP synthase delta (OSCP) subunit A6J62_16635 PF00430 ATP synthase B/B' CF(0) A6J62_16640 PF00137 ATP synthase subunit C A6J62_16645 PF00119 ATP synthase A chain A6J62_16650 PF03899 ATP synthase I chain A6J62_16655 PF02195 ParB-like nuclease domain A6J62_16655 PF17762 HTH domain found in ParB protein A6J62_16660 PF13614 AAA domain A6J62_16665 PF02527 rRNA small subunit methyltransferase G A6J62_16670 PF13932 GidA associated domain A6J62_16670 PF01134 Glucose inhibited division protein A A6J62_16680 PF00258 Flavodoxin A6J62_16685 PF01926 50S ribosome-binding GTPase A6J62_16685 PF10396 GTP-binding protein TrmE N-terminus A6J62_16685 PF12631 MnmE helical domain A6J62_16690 PF02096 60Kd inner membrane protein A6J62_16690 PF14849 YidC periplasmic domain A6J62_16695 PF01809 Putative membrane protein insertion efficiency factor A6J62_16700 PF00825 Ribonuclease P A6J62_16705 PF00468 Ribosomal protein L34 A6J62_16710 PF00005 ABC transporter A6J62_16715 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_16720 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6J62_16725 PF08299 Bacterial dnaA protein helix-turn-helix A6J62_16725 PF11638 DnaA N-terminal domain A6J62_16725 PF00308 Bacterial dnaA protein A6J62_16730 PF02768 DNA polymerase III beta subunit, C-terminal domain A6J62_16730 PF00712 DNA polymerase III beta subunit, N-terminal domain A6J62_16730 PF02767 DNA polymerase III beta subunit, central domain A6J62_16735 PF02463 RecF/RecN/SMC N terminal domain A6J62_16740 PF00986 DNA gyrase B subunit, carboxyl terminus A6J62_16740 PF18053 DNA gyrase B subunit insert domain A6J62_16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_16740 PF00204 DNA gyrase B A6J62_16740 PF01751 Toprim domain A6J62_16755 PF00011 Hsp20/alpha crystallin family A6J62_16760 PF00155 Aminotransferase class I and II A6J62_16770 PF05746 DALR anticodon binding domain A6J62_16770 PF02092 Glycyl-tRNA synthetase beta subunit A6J62_16775 PF02091 Glycyl-tRNA synthetase alpha subunit A6J62_16780 PF01169 Uncharacterized protein family UPF0016 A6J62_16790 PF01206 Sulfurtransferase TusA A6J62_16800 PF00107 Zinc-binding dehydrogenase A6J62_16800 PF08240 Alcohol dehydrogenase GroES-like domain A6J62_16805 PF00291 Pyridoxal-phosphate dependent enzyme A6J62_16805 PF00585 C-terminal regulatory domain of Threonine dehydratase A6J62_16810 PF00920 Dehydratase family A6J62_16815 PF01063 Amino-transferase class IV A6J62_16825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J62_16825 PF00205 Thiamine pyrophosphate enzyme, central domain A6J62_16825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J62_16830 PF01078 Magnesium chelatase, subunit ChlI A6J62_16830 PF13335 Magnesium chelatase, subunit ChlI C-terminal A6J62_16835 PF01553 Acyltransferase A6J62_16840 PF01323 DSBA-like thioredoxin domain A6J62_16845 PF01636 Phosphotransferase enzyme family A6J62_16850 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase A6J62_16850 PF12801 4Fe-4S binding domain A6J62_16850 PF13746 4Fe-4S dicluster domain A6J62_16860 PF06288 Protein of unknown function (DUF1040) A6J62_16870 PF07070 SpoOM protein A6J62_16875 PF03006 Haemolysin-III related A6J62_16885 PF02386 Cation transport protein A6J62_16890 PF02254 TrkA-N domain A6J62_16890 PF02080 TrkA-C domain A6J62_16895 PF01189 16S rRNA methyltransferase RsmB/F A6J62_16895 PF01029 NusB family A6J62_16900 PF02911 Formyl transferase, C-terminal domain A6J62_16900 PF00551 Formyl transferase A6J62_16905 PF01327 Polypeptide deformylase A6J62_16910 PF01476 LysM domain A6J62_16915 PF17782 DprA winged helix domain A6J62_16915 PF02481 DNA recombination-mediator protein A A6J62_16920 PF04361 Protein of unknown function (DUF494) A6J62_16925 PF01396 Topoisomerase DNA binding C4 zinc finger A6J62_16930 PF02222 ATP-grasp domain A6J62_16930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A6J62_16935 PF00731 AIR carboxylase A6J62_16940 PF01300 Telomere recombination A6J62_16945 PF01218 Coproporphyrinogen III oxidase A6J62_16950 PF01488 Shikimate / quinate 5-dehydrogenase A6J62_16950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A6J62_16950 PF08501 Shikimate dehydrogenase substrate binding domain A6J62_16960 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_17000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A6J62_17005 PF13667 ThiC-associated domain A6J62_17005 PF01964 Radical SAM ThiC family A6J62_17010 PF02581 Thiamine monophosphate synthase A6J62_17015 PF00899 ThiF family A6J62_17020 PF02597 ThiS family A6J62_17025 PF05690 Thiazole biosynthesis protein ThiG A6J62_17030 PF06968 Biotin and Thiamin Synthesis associated domain A6J62_17030 PF04055 Radical SAM superfamily A6J62_17035 PF00557 Metallopeptidase family M24 A6J62_17035 PF01321 Creatinase/Prolidase N-terminal domain A6J62_17035 PF00557 Metallopeptidase family M24 A6J62_17035 PF01321 Creatinase/Prolidase N-terminal domain A6J62_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_17040 PF03466 LysR substrate binding domain A6J62_17045 PF07690 Major Facilitator Superfamily A6J62_17055 PF01037 Lrp/AsnC ligand binding domain A6J62_17060 PF08448 PAS fold A6J62_17060 PF00990 Diguanylate cyclase, GGDEF domain A6J62_17060 PF00563 EAL domain A6J62_17065 PF04445 Putative SAM-dependent methyltransferase A6J62_17075 PF00892 EamA-like transporter family A6J62_17080 PF00582 Universal stress protein family A6J62_17090 PF00210 Ferritin-like domain A6J62_17095 PF10625 Universal stress protein B (UspB) A6J62_17110 PF02646 RmuC family A6J62_17115 PF01209 ubiE/COQ5 methyltransferase family A6J62_17120 PF02036 SCP-2 sterol transfer family A6J62_17125 PF03109 ABC1 family A6J62_17130 PF02416 mttA/Hcf106 family A6J62_17135 PF02416 mttA/Hcf106 family A6J62_17140 PF00902 Sec-independent protein translocase protein (TatC) A6J62_17145 PF03150 Di-haem cytochrome c peroxidase A6J62_17145 PF00034 Cytochrome c A6J62_17150 PF01554 MatE A6J62_17160 PF01726 LexA DNA binding domain A6J62_17160 PF00717 Peptidase S24-like A6J62_17170 PF01553 Acyltransferase A6J62_17175 PF01040 UbiA prenyltransferase family A6J62_17180 PF04345 Chorismate lyase A6J62_17190 PF03748 Flagellar basal body-associated protein FliL A6J62_17195 PF00672 HAMP domain A6J62_17195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_17195 PF02203 Tar ligand binding domain homologue A6J62_17200 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease A6J62_17200 PF01694 Rhomboid family A6J62_17205 PF00581 Rhodanese-like domain A6J62_17215 PF01026 TatD related DNase A6J62_17220 PF00490 Delta-aminolevulinic acid dehydratase A6J62_17230 PF01367 5'-3' exonuclease, C-terminal SAM fold A6J62_17230 PF01612 3'-5' exonuclease A6J62_17230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6J62_17230 PF00476 DNA polymerase family A A6J62_17235 PF01926 50S ribosome-binding GTPase A6J62_17240 PF00034 Cytochrome c A6J62_17250 PF04220 Der GTPase activator (YihI) A6J62_17255 PF10675 Protein of unknown function (DUF2489) A6J62_17260 PF04055 Radical SAM superfamily A6J62_17260 PF06969 HemN C-terminal domain A6J62_17265 PF07219 HemY protein N-terminus A6J62_17270 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase A6J62_17275 PF02602 Uroporphyrinogen-III synthase HemD A6J62_17280 PF03900 Porphobilinogen deaminase, C-terminal domain A6J62_17280 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A6J62_17290 PF12633 Adenylate cyclase NT domain A6J62_17290 PF01295 Adenylate cyclase, class-I A6J62_17295 PF01491 Frataxin-like domain A6J62_17305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6J62_17305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6J62_17310 PF01678 Diaminopimelate epimerase A6J62_17315 PF04340 Protein of unknown function, DUF484 A6J62_17320 PF00589 Phage integrase family A6J62_17320 PF02899 Phage integrase, N-terminal SAM-like domain A6J62_17325 PF13419 Haloacid dehalogenase-like hydrolase A6J62_17330 PF00990 Diguanylate cyclase, GGDEF domain A6J62_17330 PF08495 FIST N domain A6J62_17330 PF00563 EAL domain A6J62_17330 PF10442 FIST C domain A6J62_17355 PF12146 Serine aminopeptidase, S33 A6J62_17360 PF01810 LysE type translocator A6J62_17365 PF00563 EAL domain A6J62_17365 PF08668 HDOD domain A6J62_17370 PF00210 Ferritin-like domain A6J62_17415 PF00448 SRP54-type protein, GTPase domain A6J62_17415 PF02881 SRP54-type protein, helical bundle domain A6J62_17420 PF00005 ABC transporter A6J62_17425 PF18075 FtsX extracellular domain A6J62_17430 PF04545 Sigma-70, region 4 A6J62_17430 PF00140 Sigma-70 factor, region 1.2 A6J62_17430 PF04542 Sigma-70 region 2 A6J62_17435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J62_17435 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_17445 PF00440 Bacterial regulatory proteins, tetR family A6J62_17455 PF05958 tRNA (Uracil-5-)-methyltransferase A6J62_17460 PF07715 TonB-dependent Receptor Plug Domain A6J62_17460 PF00593 TonB dependent receptor A6J62_17465 PF05922 Peptidase inhibitor I9 A6J62_17465 PF00082 Subtilase family A6J62_17465 PF04151 Bacterial pre-peptidase C-terminal domain A6J62_17470 PF01177 Asp/Glu/Hydantoin racemase A6J62_17545 PF00962 Adenosine/AMP deaminase A6J62_17550 PF03707 Bacterial signalling protein N terminal repeat A6J62_17550 PF13188 PAS domain A6J62_17550 PF00563 EAL domain A6J62_17550 PF00990 Diguanylate cyclase, GGDEF domain A6J62_17555 PF02954 Bacterial regulatory protein, Fis family A6J62_17555 PF00072 Response regulator receiver domain A6J62_17555 PF00158 Sigma-54 interaction domain A6J62_17560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_17560 PF00989 PAS fold A6J62_17560 PF00512 His Kinase A (phospho-acceptor) domain A6J62_17570 PF03951 Glutamine synthetase, beta-Grasp domain A6J62_17570 PF00120 Glutamine synthetase, catalytic domain A6J62_17585 PF03668 P-loop ATPase protein family A6J62_17590 PF03631 Virulence factor BrkB A6J62_17595 PF02580 D-Tyr-tRNA(Tyr) deacylase A6J62_17600 PF09500 Putative thioesterase (yiiD_Cterm) A6J62_17600 PF00583 Acetyltransferase (GNAT) family A6J62_17610 PF01293 Phosphoenolpyruvate carboxykinase A6J62_17615 PF01430 Hsp33 protein A6J62_17620 PF01479 S4 domain A6J62_17625 PF11356 Type II secretion system protein C A6J62_17630 PF03958 Bacterial type II/III secretion system short domain A6J62_17630 PF00263 Bacterial type II and III secretion system protein A6J62_17635 PF00437 Type II/IV secretion system protein A6J62_17640 PF00482 Type II secretion system (T2SS), protein F A6J62_17645 PF07963 Prokaryotic N-terminal methylation motif A6J62_17645 PF08334 Type II secretion system (T2SS), protein G A6J62_17650 PF12019 Type II transport protein GspH A6J62_17655 PF07963 Prokaryotic N-terminal methylation motif A6J62_17655 PF02501 Type II secretion system (T2SS), protein I A6J62_17660 PF07963 Prokaryotic N-terminal methylation motif A6J62_17660 PF11612 Type II secretion system (T2SS), protein J A6J62_17665 PF03934 Type II secretion system (T2SS), protein K A6J62_17670 PF05134 Type II secretion system (T2SS), protein L A6J62_17670 PF12693 GspL periplasmic domain A6J62_17675 PF04612 Type II secretion system (T2SS), protein M A6J62_17680 PF01203 Type II secretion system (T2SS), protein N A6J62_17685 PF00459 Inositol monophosphatase family A6J62_17690 PF00293 NUDIX domain A6J62_17695 PF01106 NifU-like domain A6J62_17695 PF01521 Iron-sulphur cluster biosynthesis A6J62_17700 PF00156 Phosphoribosyl transferase domain A6J62_17705 PF00561 alpha/beta hydrolase fold A6J62_17715 PF00575 S1 RNA binding domain A6J62_17715 PF09371 Tex-like protein N-terminal domain A6J62_17715 PF16921 Tex protein YqgF-like domain A6J62_17715 PF17674 HHH domain A6J62_17720 PF03449 Transcription elongation factor, N-terminal A6J62_17720 PF01272 Transcription elongation factor, GreA/GreB, C-term A6J62_17725 PF00072 Response regulator receiver domain A6J62_17725 PF00486 Transcriptional regulatory protein, C terminal A6J62_17730 PF00672 HAMP domain A6J62_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_17730 PF00512 His Kinase A (phospho-acceptor) domain A6J62_17735 PF00860 Permease family A6J62_17740 PF00270 DEAD/DEAH box helicase A6J62_17740 PF17191 RecG wedge domain A6J62_17740 PF00271 Helicase conserved C-terminal domain A6J62_17745 PF13291 ACT domain A6J62_17745 PF04607 Region found in RelA / SpoT proteins A6J62_17745 PF02824 TGS domain A6J62_17750 PF01192 RNA polymerase Rpb6 A6J62_17755 PF00625 Guanylate kinase A6J62_17760 PF02592 Putative vitamin uptake transporter A6J62_17765 PF00474 Sodium:solute symporter family A6J62_17775 PF03471 Transporter associated domain A6J62_17775 PF00999 Sodium/hydrogen exchanger family A6J62_17775 PF02080 TrkA-C domain A6J62_17780 PF00196 Bacterial regulatory proteins, luxR family A6J62_17780 PF00072 Response regulator receiver domain A6J62_17785 PF02683 Cytochrome C biogenesis protein transmembrane region A6J62_17785 PF11412 Disulphide bond corrector protein DsbC A6J62_17800 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6J62_17805 PF10415 Fumarase C C-terminus A6J62_17805 PF00206 Lyase A6J62_17810 PF17158 Membrane-associated sensor, integral membrane domain A6J62_17810 PF00990 Diguanylate cyclase, GGDEF domain A6J62_17815 PF04186 FxsA cytoplasmic membrane protein A6J62_17820 PF00588 SpoU rRNA Methylase family A6J62_17825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6J62_17825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6J62_17830 PF16527 Two-component sensor protein CpxA, periplasmic domain A6J62_17830 PF00672 HAMP domain A6J62_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_17830 PF00512 His Kinase A (phospho-acceptor) domain A6J62_17835 PF00486 Transcriptional regulatory protein, C terminal A6J62_17835 PF00072 Response regulator receiver domain A6J62_17845 PF01545 Cation efflux family A6J62_17845 PF16916 Dimerisation domain of Zinc Transporter A6J62_17850 PF00365 Phosphofructokinase A6J62_17855 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A6J62_17860 PF06005 Cell division protein ZapB A6J62_17865 PF02219 Methylenetetrahydrofolate reductase A6J62_17870 PF00696 Amino acid kinase family A6J62_17870 PF03447 Homoserine dehydrogenase, NAD binding domain A6J62_17870 PF00742 Homoserine dehydrogenase A6J62_17875 PF01053 Cys/Met metabolism PLP-dependent enzyme A6J62_17880 PF01340 Met Apo-repressor, MetJ A6J62_17885 PF03949 Malic enzyme, NAD binding domain A6J62_17885 PF00390 Malic enzyme, N-terminal domain A6J62_17890 PF01197 Ribosomal protein L31 A6J62_17895 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A6J62_17895 PF00271 Helicase conserved C-terminal domain A6J62_17895 PF17764 3′ DNA-binding domain (3′BD) A6J62_17895 PF18074 Primosomal protein N C-terminal domain A6J62_17895 PF00270 DEAD/DEAH box helicase A6J62_17900 PF00356 Bacterial regulatory proteins, lacI family A6J62_17905 PF05036 Sporulation related domain A6J62_17910 PF00227 Proteasome subunit A6J62_17915 PF10431 C-terminal, D2-small domain, of ClpB protein A6J62_17915 PF07724 AAA domain (Cdc48 subfamily) A6J62_17915 PF00004 ATPase family associated with various cellular activities (AAA) A6J62_17920 PF01040 UbiA prenyltransferase family A6J62_17925 PF03737 Aldolase/RraA A6J62_17935 PF00121 Triosephosphate isomerase A6J62_17955 PF08220 DeoR-like helix-turn-helix domain A6J62_17955 PF00455 DeoR C terminal sensor domain A6J62_17960 PF00166 Chaperonin 10 Kd subunit A6J62_17965 PF00118 TCP-1/cpn60 chaperonin family A6J62_17975 PF04055 Radical SAM superfamily A6J62_17980 PF01132 Elongation factor P (EF-P) OB domain A6J62_17980 PF09285 Elongation factor P, C-terminal A6J62_17980 PF08207 Elongation factor P (EF-P) KOW-like domain A6J62_17985 PF02313 Fumarate reductase subunit D A6J62_17990 PF02300 Fumarate reductase subunit C A6J62_17995 PF13183 4Fe-4S dicluster domain A6J62_17995 PF13085 2Fe-2S iron-sulfur cluster binding domain A6J62_18000 PF02910 Fumarate reductase flavoprotein C-term A6J62_18000 PF00890 FAD binding domain A6J62_18005 PF00152 tRNA synthetases class II (D, K and N) A6J62_18010 PF00581 Rhodanese-like domain A6J62_18015 PF02556 Preprotein translocase subunit SecB A6J62_18020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A6J62_18020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A6J62_18025 PF06426 Serine acetyltransferase, N-terminal A6J62_18025 PF00132 Bacterial transferase hexapeptide (six repeats) A6J62_18035 PF00311 Phosphoenolpyruvate carboxylase A6J62_18040 PF07687 Peptidase dimerisation domain A6J62_18040 PF01546 Peptidase family M20/M25/M40 A6J62_18045 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6J62_18045 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6J62_18050 PF00696 Amino acid kinase family A6J62_18055 PF00764 Arginosuccinate synthase A6J62_18065 PF14698 Argininosuccinate lyase C-terminal A6J62_18065 PF00206 Lyase A6J62_18075 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_18075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J62_18080 PF08534 Redoxin A6J62_18080 PF00462 Glutaredoxin A6J62_18085 PF03466 LysR substrate binding domain A6J62_18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_18090 PF00905 Penicillin binding protein transpeptidase domain A6J62_18090 PF00912 Transglycosylase A6J62_18090 PF17092 Penicillin-binding protein OB-like domain A6J62_18115 PF07660 Secretin and TonB N terminus short domain A6J62_18115 PF03958 Bacterial type II/III secretion system short domain A6J62_18115 PF11741 AMIN domain A6J62_18115 PF00263 Bacterial type II and III secretion system protein A6J62_18120 PF01202 Shikimate kinase A6J62_18125 PF01761 3-dehydroquinate synthase A6J62_18135 PF02086 D12 class N6 adenine-specific DNA methyltransferase A6J62_18140 PF00834 Ribulose-phosphate 3 epimerase family A6J62_18145 PF13419 Haloacid dehalogenase-like hydrolase A6J62_18150 PF00579 tRNA synthetases class I (W and Y) A6J62_18165 PF04055 Radical SAM superfamily A6J62_18165 PF00919 Uncharacterized protein family UPF0004 A6J62_18165 PF18693 TRAM domain A6J62_18170 PF00117 Glutamine amidotransferase class-I A6J62_18175 PF00202 Aminotransferase class-III A6J62_18180 PF04958 Arginine N-succinyltransferase beta subunit A6J62_18185 PF00171 Aldehyde dehydrogenase family A6J62_18195 PF13545 Crp-like helix-turn-helix domain A6J62_18195 PF00027 Cyclic nucleotide-binding domain A6J62_18200 PF00485 Phosphoribulokinase / Uridine kinase family A6J62_18205 PF06794 Uncharacterised protein family (UPF0270) A6J62_18210 PF00561 alpha/beta hydrolase fold A6J62_18220 PF12848 ABC transporter A6J62_18220 PF00005 ABC transporter A6J62_18225 PF02525 Flavodoxin-like fold A6J62_18230 PF02254 TrkA-N domain A6J62_18230 PF00999 Sodium/hydrogen exchanger family A6J62_18240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J62_18245 PF01112 Asparaginase A6J62_18250 PF00709 Adenylosuccinate synthetase A6J62_18260 PF08238 Sel1 repeat A6J62_18265 PF11893 Domain of unknown function (DUF3413) A6J62_18265 PF00884 Sulfatase A6J62_18270 PF00575 S1 RNA binding domain A6J62_18270 PF00773 RNB domain A6J62_18270 PF08206 Ribonuclease B OB domain A6J62_18270 PF08461 Ribonuclease R winged-helix domain A6J62_18270 PF17876 Cold shock domain A6J62_18275 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6J62_18275 PF00588 SpoU rRNA Methylase family A6J62_18280 PF00338 Ribosomal protein S10p/S20e A6J62_18285 PF00297 Ribosomal protein L3 A6J62_18290 PF00573 Ribosomal protein L4/L1 family A6J62_18295 PF00276 Ribosomal protein L23 A6J62_18300 PF03947 Ribosomal Proteins L2, C-terminal domain A6J62_18300 PF00181 Ribosomal Proteins L2, RNA binding domain A6J62_18305 PF00203 Ribosomal protein S19 A6J62_18310 PF00237 Ribosomal protein L22p/L17e A6J62_18315 PF07650 KH domain A6J62_18315 PF00189 Ribosomal protein S3, C-terminal domain A6J62_18320 PF00252 Ribosomal protein L16p/L10e A6J62_18325 PF00831 Ribosomal L29 protein A6J62_18330 PF00366 Ribosomal protein S17 A6J62_18335 PF00238 Ribosomal protein L14p/L23e A6J62_18340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A6J62_18340 PF00467 KOW motif A6J62_18345 PF00673 ribosomal L5P family C-terminus A6J62_18345 PF00281 Ribosomal protein L5 A6J62_18350 PF00253 Ribosomal protein S14p/S29e A6J62_18355 PF00410 Ribosomal protein S8 A6J62_18360 PF00347 Ribosomal protein L6 A6J62_18365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A6J62_18370 PF00333 Ribosomal protein S5, N-terminal domain A6J62_18370 PF03719 Ribosomal protein S5, C-terminal domain A6J62_18375 PF00327 Ribosomal protein L30p/L7e A6J62_18380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A6J62_18385 PF00344 SecY translocase A6J62_18390 PF00444 Ribosomal protein L36 A6J62_18395 PF00416 Ribosomal protein S13/S18 A6J62_18400 PF00411 Ribosomal protein S11 A6J62_18405 PF01479 S4 domain A6J62_18405 PF00163 Ribosomal protein S4/S9 N-terminal domain A6J62_18410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A6J62_18410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A6J62_18410 PF01000 RNA polymerase Rpb3/RpoA insert domain A6J62_18415 PF01196 Ribosomal protein L17 A6J62_18425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6J62_18425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6J62_18430 PF04225 Opacity-associated protein A LysM-like domain A6J62_18430 PF08525 Opacity-associated protein A N-terminal motif A6J62_18435 PF00892 EamA-like transporter family A6J62_18440 PF13673 Acetyltransferase (GNAT) domain A6J62_18445 PF00271 Helicase conserved C-terminal domain A6J62_18445 PF00270 DEAD/DEAH box helicase A6J62_18445 PF03880 DbpA RNA binding domain A6J62_18455 PF00149 Calcineurin-like phosphoesterase A6J62_18455 PF02872 5'-nucleotidase, C-terminal domain A6J62_18460 PF14824 Sirohaem biosynthesis protein central A6J62_18460 PF10414 Sirohaem synthase dimerisation region A6J62_18460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6J62_18465 PF01507 Phosphoadenosine phosphosulfate reductase family A6J62_18470 PF00009 Elongation factor Tu GTP binding domain A6J62_18495 PF00005 ABC transporter A6J62_18505 PF10795 Protein of unknown function (DUF2607) A6J62_18510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) A6J62_18515 PF01625 Peptide methionine sulfoxide reductase A6J62_18520 PF07244 Surface antigen variable number repeat A6J62_18520 PF01103 Surface antigen A6J62_18520 PF17243 POTRA domain TamA domain 1 A6J62_18525 PF04357 TamB, inner membrane protein subunit of TAM complex A6J62_18530 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like A6J62_18535 PF00719 Inorganic pyrophosphatase A6J62_18540 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A6J62_18550 PF08245 Mur ligase middle domain A6J62_18550 PF02875 Mur ligase family, glutamate ligase domain A6J62_18550 PF01225 Mur ligase family, catalytic domain A6J62_18555 PF02441 Flavoprotein A6J62_18565 PF00528 Binding-protein-dependent transport system inner membrane component A6J62_18570 PF00005 ABC transporter A6J62_18575 PF04751 Protein of unknown function (DUF615) A6J62_18580 PF01523 Putative modulator of DNA gyrase A6J62_18585 PF03448 MgtE intracellular N domain A6J62_18585 PF01769 Divalent cation transporter A6J62_18585 PF00571 CBS domain A6J62_18590 PF00381 PTS HPr component phosphorylation site A6J62_18595 PF03668 P-loop ATPase protein family A6J62_18600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6J62_18605 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6J62_18610 PF00309 Sigma-54 factor, Activator interacting domain (AID) A6J62_18610 PF04963 Sigma-54 factor, core binding domain A6J62_18610 PF04552 Sigma-54, DNA binding domain A6J62_18615 PF00005 ABC transporter A6J62_18615 PF12399 Branched-chain amino acid ATP-binding cassette transporter A6J62_18620 PF03968 OstA-like protein A6J62_18635 PF00571 CBS domain A6J62_18635 PF01380 SIS domain A6J62_18640 PF01699 Sodium/calcium exchanger protein A6J62_18650 PF00005 ABC transporter A6J62_18655 PF02405 Permease MlaE A6J62_18660 PF02470 MlaD protein A6J62_18665 PF05494 MlaC protein A6J62_18675 PF01722 BolA-like protein A6J62_18680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6J62_18685 PF01553 Acyltransferase A6J62_18690 PF01042 Endoribonuclease L-PSP A6J62_18695 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A6J62_18695 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A6J62_18700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6J62_18700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6J62_18705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6J62_18705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6J62_18710 PF02562 PhoH-like protein A6J62_18710 PF13638 PIN domain A6J62_18720 PF18337 RapA N-terminal Tudor like domain A6J62_18720 PF18339 RapA N-terminal Tudor like domain 1 A6J62_18720 PF12137 RNA polymerase recycling family C-terminal A6J62_18720 PF00176 SNF2 family N-terminal domain A6J62_18720 PF00271 Helicase conserved C-terminal domain A6J62_18725 PF00849 RNA pseudouridylate synthase A6J62_18730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J62_18730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J62_18735 PF10458 Valyl tRNA synthetase tRNA binding arm A6J62_18735 PF00133 tRNA synthetases class I (I, L, M and V) A6J62_18735 PF08264 Anticodon-binding domain of tRNA A6J62_18740 PF04364 DNA polymerase III chi subunit, HolC A6J62_18745 PF00883 Cytosol aminopeptidase family, catalytic domain A6J62_18745 PF02789 Cytosol aminopeptidase family, N-terminal domain A6J62_18750 PF03739 Lipopolysaccharide export system permease LptF/LptG A6J62_18755 PF03739 Lipopolysaccharide export system permease LptF/LptG A6J62_18770 PF00072 Response regulator receiver domain A6J62_18815 PF00694 Aconitase C-terminal domain A6J62_18820 PF00330 Aconitase family (aconitate hydratase) A6J62_18825 PF00180 Isocitrate/isopropylmalate dehydrogenase A6J62_18830 PF08502 LeuA allosteric (dimerisation) domain A6J62_18830 PF00682 HMGL-like A6J62_18840 PF01569 PAP2 superfamily A6J62_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_18850 PF03466 LysR substrate binding domain A6J62_18855 PF00501 AMP-binding enzyme A6J62_18860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6J62_18860 PF00205 Thiamine pyrophosphate enzyme, central domain A6J62_18860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6J62_18865 PF10369 Small subunit of acetolactate synthase A6J62_18870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6J62_18870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6J62_18870 PF01842 ACT domain A6J62_18875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A6J62_18880 PF01812 5-formyltetrahydrofolate cyclo-ligase family A6J62_18890 PF05164 Cell division protein ZapA A6J62_18895 PF03695 Uncharacterised protein family (UPF0149) A6J62_18900 PF01494 FAD binding domain A6J62_18905 PF01494 FAD binding domain A6J62_18920 PF03937 Flavinator of succinate dehydrogenase A6J62_18930 PF00890 FAD binding domain A6J62_18930 PF02910 Fumarate reductase flavoprotein C-term A6J62_18940 PF04542 Sigma-70 region 2 A6J62_18940 PF08281 Sigma-70, region 4 A6J62_18945 PF03872 Anti sigma-E protein RseA, N-terminal domain A6J62_18945 PF03873 Anti sigma-E protein RseA, C-terminal domain A6J62_18950 PF03888 MucB/RseB N-terminal domain A6J62_18950 PF17188 MucB/RseB C-terminal domain A6J62_18960 PF00009 Elongation factor Tu GTP binding domain A6J62_18960 PF00679 Elongation factor G C-terminus A6J62_18960 PF06421 GTP-binding protein LepA C-terminus A6J62_18960 PF03144 Elongation factor Tu domain 2 A6J62_18965 PF10502 Signal peptidase, peptidase S26 A6J62_18970 PF14622 Ribonuclease-III-like A6J62_18970 PF00035 Double-stranded RNA binding motif A6J62_18975 PF01926 50S ribosome-binding GTPase A6J62_18975 PF07650 KH domain A6J62_18980 PF11967 Recombination protein O N terminal A6J62_18980 PF02565 Recombination protein O C terminal A6J62_18985 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A6J62_18990 PF01648 4'-phosphopantetheinyl transferase superfamily A6J62_19005 PF00563 EAL domain A6J62_19005 PF00990 Diguanylate cyclase, GGDEF domain A6J62_19010 PF00512 His Kinase A (phospho-acceptor) domain A6J62_19010 PF01627 Hpt domain A6J62_19010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_19010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6J62_19010 PF00672 HAMP domain A6J62_19010 PF00072 Response regulator receiver domain A6J62_19015 PF01938 TRAM domain A6J62_19015 PF05958 tRNA (Uracil-5-)-methyltransferase A6J62_19020 PF02824 TGS domain A6J62_19020 PF04607 Region found in RelA / SpoT proteins A6J62_19020 PF13291 ACT domain A6J62_19025 PF03819 MazG nucleotide pyrophosphohydrolase domain A6J62_19030 PF06418 CTP synthase N-terminus A6J62_19030 PF00117 Glutamine amidotransferase class-I A6J62_19035 PF03952 Enolase, N-terminal domain A6J62_19035 PF00113 Enolase, C-terminal TIM barrel domain A6J62_19040 PF12627 Probable RNA and SrmB- binding site of polymerase A A6J62_19040 PF01966 HD domain A6J62_19040 PF01743 Poly A polymerase head domain A6J62_19045 PF01471 Putative peptidoglycan binding domain A6J62_19045 PF13401 AAA domain A6J62_19055 PF08239 Bacterial SH3 domain A6J62_19060 PF01384 Phosphate transporter family A6J62_19065 PF01865 Protein of unknown function DUF47 A6J62_19070 PF01928 CYTH domain A6J62_19075 PF02743 Cache domain A6J62_19075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6J62_19075 PF00672 HAMP domain A6J62_19080 PF03710 Glutamate-ammonia ligase adenylyltransferase A6J62_19080 PF08335 GlnD PII-uridylyltransferase A6J62_19085 PF00294 pfkB family carbohydrate kinase A6J62_19085 PF01467 Cytidylyltransferase-like A6J62_19090 PF02321 Outer membrane efflux protein A6J62_19095 PF00293 NUDIX domain A6J62_19100 PF06853 Protein of unknown function (DUF1249) A6J62_19105 PF00149 Calcineurin-like phosphoesterase A6J62_19110 PF05728 Uncharacterised protein family (UPF0227) A6J62_19115 PF01751 Toprim domain A6J62_19115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6J62_19115 PF00986 DNA gyrase B subunit, carboxyl terminus A6J62_19115 PF00204 DNA gyrase B A6J62_19120 PF03989 DNA gyrase C-terminal domain, beta-propeller A6J62_19120 PF00521 DNA gyrase/topoisomerase IV, subunit A A6J62_19125 PF03884 DNA gyrase inhibitor YacG A6J62_19130 PF07072 Cell division protein A6J62_19135 PF01121 Dephospho-CoA kinase A6J62_19140 PF06750 Bacterial Peptidase A24 N-terminal domain A6J62_19140 PF01478 Type IV leader peptidase family A6J62_19145 PF00482 Type II secretion system (T2SS), protein F A6J62_19150 PF00437 Type II/IV secretion system protein A6J62_19150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6J62_19155 PF07963 Prokaryotic N-terminal methylation motif A6J62_19155 PF00114 Pilin (bacterial filament) A6J62_19160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A6J62_19160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A6J62_19165 PF01510 N-acetylmuramoyl-L-alanine amidase A6J62_19170 PF00258 Flavodoxin A6J62_19175 PF02899 Phage integrase, N-terminal SAM-like domain A6J62_19175 PF00589 Phage integrase family A6J62_19180 PF13098 Thioredoxin-like domain A6J62_19180 PF10411 Disulfide bond isomerase protein N-terminus A6J62_19185 PF17768 RecJ OB domain A6J62_19185 PF02272 DHHA1 domain A6J62_19185 PF01368 DHH family A6J62_19190 PF02872 5'-nucleotidase, C-terminal domain A6J62_19190 PF00149 Calcineurin-like phosphoesterase A6J62_19200 PF07729 FCD domain A6J62_19200 PF00392 Bacterial regulatory proteins, gntR family A6J62_19205 PF17831 Pyruvate dehydrogenase E1 component middle domain A6J62_19205 PF00456 Transketolase, thiamine diphosphate binding domain A6J62_19210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6J62_19210 PF00364 Biotin-requiring enzyme A6J62_19210 PF02817 e3 binding domain A6J62_19215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6J62_19215 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_19225 PF01795 MraW methylase family A6J62_19230 PF04999 Cell division protein FtsL A6J62_19235 PF00905 Penicillin binding protein transpeptidase domain A6J62_19235 PF03717 Penicillin-binding Protein dimerisation domain A6J62_19240 PF02875 Mur ligase family, glutamate ligase domain A6J62_19240 PF01225 Mur ligase family, catalytic domain A6J62_19240 PF08245 Mur ligase middle domain A6J62_19245 PF08245 Mur ligase middle domain A6J62_19245 PF02875 Mur ligase family, glutamate ligase domain A6J62_19245 PF01225 Mur ligase family, catalytic domain A6J62_19250 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A6J62_19250 PF00953 Glycosyl transferase family 4 A6J62_19255 PF08245 Mur ligase middle domain A6J62_19255 PF02875 Mur ligase family, glutamate ligase domain A6J62_19260 PF01098 Cell cycle protein A6J62_19265 PF03033 Glycosyltransferase family 28 N-terminal domain A6J62_19265 PF04101 Glycosyltransferase family 28 C-terminal domain A6J62_19270 PF08245 Mur ligase middle domain A6J62_19270 PF02875 Mur ligase family, glutamate ligase domain A6J62_19270 PF01225 Mur ligase family, catalytic domain A6J62_19275 PF03799 Cell division protein FtsQ A6J62_19275 PF08478 POTRA domain, FtsQ-type A6J62_19280 PF02491 SHS2 domain inserted in FTSA A6J62_19285 PF00091 Tubulin/FtsZ family, GTPase domain A6J62_19285 PF12327 FtsZ family, C-terminal domain A6J62_19290 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A6J62_19300 PF07516 SecA Wing and Scaffold domain A6J62_19300 PF01043 SecA preprotein cross-linking domain A6J62_19300 PF07517 SecA DEAD-like domain A6J62_19300 PF02810 SEC-C motif A6J62_19305 PF00293 NUDIX domain A6J62_19310 PF05173 Dihydrodipicolinate reductase, C-terminus A6J62_19310 PF01113 Dihydrodipicolinate reductase, N-terminus A6J62_19320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A6J62_19320 PF00117 Glutamine amidotransferase class-I A6J62_19325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6J62_19325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6J62_19325 PF02142 MGS-like domain A6J62_19345 PF00005 ABC transporter A6J62_19350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A6J62_19355 PF01925 Sulfite exporter TauE/SafE A6J62_19360 PF03466 LysR substrate binding domain A6J62_19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6J62_19365 PF03458 UPF0126 domain A6J62_19370 PF01497 Periplasmic binding protein A6J62_19380 PF01048 Phosphorylase superfamily A6J62_19390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6J62_19390 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6J62_19660 PF11713 Peptidase C80 family A6J62_19660 PF16671 Actin cross-linking domain A6J62_19660 PF07634 RtxA repeat A6J62_19660 PF11647 Membrane Localization Domain A6J62_19660 PF12146 Serine aminopeptidase, S33