locus-tag class description FORC55_0001 PF11638 DnaA N-terminal domain FORC55_0001 PF00308 Bacterial dnaA protein FORC55_0001 PF08299 Bacterial dnaA protein helix-turn-helix FORC55_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain FORC55_0002 PF02767 DNA polymerase III beta subunit, central domain FORC55_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain FORC55_0003 PF02463 RecF/RecN/SMC N terminal domain FORC55_0004 PF00986 DNA gyrase B subunit, carboxyl terminus FORC55_0004 PF01751 Toprim domain FORC55_0004 PF00204 DNA gyrase B FORC55_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0004 PF18053 DNA gyrase B subunit insert domain FORC55_0006 PF00011 Hsp20/alpha crystallin family FORC55_0007 PF00155 Aminotransferase class I and II FORC55_0008 PF02092 Glycyl-tRNA synthetase beta subunit FORC55_0008 PF05746 DALR anticodon binding domain FORC55_0009 PF02091 Glycyl-tRNA synthetase alpha subunit FORC55_0010 PF01169 Uncharacterized protein family UPF0016 FORC55_0012 PF01206 Sulfurtransferase TusA FORC55_0014 PF00107 Zinc-binding dehydrogenase FORC55_0014 PF08240 Alcohol dehydrogenase GroES-like domain FORC55_0015 PF00585 C-terminal regulatory domain of Threonine dehydratase FORC55_0015 PF00291 Pyridoxal-phosphate dependent enzyme FORC55_0016 PF00920 Dehydratase family FORC55_0017 PF01063 Amino-transferase class IV FORC55_0019 PF00205 Thiamine pyrophosphate enzyme, central domain FORC55_0019 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC55_0019 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC55_0020 PF01078 Magnesium chelatase, subunit ChlI FORC55_0020 PF13335 Magnesium chelatase, subunit ChlI C-terminal FORC55_0021 PF01553 Acyltransferase FORC55_0022 PF01323 DSBA-like thioredoxin domain FORC55_0023 PF01636 Phosphotransferase enzyme family FORC55_0024 PF13746 4Fe-4S dicluster domain FORC55_0024 PF12801 4Fe-4S binding domain FORC55_0024 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FORC55_0025 PF06288 Protein of unknown function (DUF1040) FORC55_0026 PF07070 SpoOM protein FORC55_0027 PF03006 Haemolysin-III related FORC55_0029 PF02386 Cation transport protein FORC55_0030 PF02080 TrkA-C domain FORC55_0030 PF02254 TrkA-N domain FORC55_0031 PF01189 16S rRNA methyltransferase RsmB/F FORC55_0031 PF01029 NusB family FORC55_0032 PF02911 Formyl transferase, C-terminal domain FORC55_0032 PF00551 Formyl transferase FORC55_0033 PF01327 Polypeptide deformylase FORC55_0034 PF01476 LysM domain FORC55_0035 PF17782 DprA winged helix domain FORC55_0035 PF02481 DNA recombination-mediator protein A FORC55_0036 PF04361 Protein of unknown function (DUF494) FORC55_0037 PF01396 Topoisomerase DNA binding C4 zinc finger FORC55_0038 PF02222 ATP-grasp domain FORC55_0038 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FORC55_0039 PF00731 AIR carboxylase FORC55_0040 PF01300 Telomere recombination FORC55_0041 PF01218 Coproporphyrinogen III oxidase FORC55_0042 PF01488 Shikimate / quinate 5-dehydrogenase FORC55_0042 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FORC55_0042 PF08501 Shikimate dehydrogenase substrate binding domain FORC55_0044 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_0045 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FORC55_0046 PF01964 Radical SAM ThiC family FORC55_0046 PF13667 ThiC-associated domain FORC55_0047 PF02581 Thiamine monophosphate synthase FORC55_0048 PF00899 ThiF family FORC55_0049 PF02597 ThiS family FORC55_0050 PF05690 Thiazole biosynthesis protein ThiG FORC55_0051 PF06968 Biotin and Thiamin Synthesis associated domain FORC55_0051 PF04055 Radical SAM superfamily FORC55_0052 PF00557 Metallopeptidase family M24 FORC55_0052 PF01321 Creatinase/Prolidase N-terminal domain FORC55_0052 PF01321 Creatinase/Prolidase N-terminal domain FORC55_0052 PF00557 Metallopeptidase family M24 FORC55_0053 PF03466 LysR substrate binding domain FORC55_0053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0054 PF07690 Major Facilitator Superfamily FORC55_0056 PF01037 Lrp/AsnC ligand binding domain FORC55_0057 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0057 PF00563 EAL domain FORC55_0057 PF08448 PAS fold FORC55_0058 PF04445 Putative SAM-dependent methyltransferase FORC55_0060 PF00892 EamA-like transporter family FORC55_0061 PF00582 Universal stress protein family FORC55_0062 PF00210 Ferritin-like domain FORC55_0063 PF10625 Universal stress protein B (UspB) FORC55_0065 PF08447 PAS fold FORC55_0065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0067 PF02646 RmuC family FORC55_0068 PF01209 ubiE/COQ5 methyltransferase family FORC55_0069 PF02036 SCP-2 sterol transfer family FORC55_0070 PF03109 ABC1 family FORC55_0071 PF02416 mttA/Hcf106 family FORC55_0072 PF02416 mttA/Hcf106 family FORC55_0073 PF00902 Sec-independent protein translocase protein (TatC) FORC55_0075 PF03150 Di-haem cytochrome c peroxidase FORC55_0075 PF00034 Cytochrome c FORC55_0076 PF01554 MatE FORC55_0078 PF01726 LexA DNA binding domain FORC55_0078 PF00717 Peptidase S24-like FORC55_0079 PF01553 Acyltransferase FORC55_0080 PF01040 UbiA prenyltransferase family FORC55_0081 PF04345 Chorismate lyase FORC55_0082 PF03748 Flagellar basal body-associated protein FliL FORC55_0083 PF08447 PAS fold FORC55_0083 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0083 PF13426 PAS domain FORC55_0084 PF01694 Rhomboid family FORC55_0084 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FORC55_0085 PF00581 Rhodanese-like domain FORC55_0086 PF01026 TatD related DNase FORC55_0087 PF00490 Delta-aminolevulinic acid dehydratase FORC55_0089 PF01612 3'-5' exonuclease FORC55_0089 PF00476 DNA polymerase family A FORC55_0089 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FORC55_0089 PF01367 5'-3' exonuclease, C-terminal SAM fold FORC55_0090 PF01926 50S ribosome-binding GTPase FORC55_0091 PF00034 Cytochrome c FORC55_0093 PF04220 Der GTPase activator (YihI) FORC55_0094 PF10675 Protein of unknown function (DUF2489) FORC55_0095 PF04055 Radical SAM superfamily FORC55_0095 PF06969 HemN C-terminal domain FORC55_0096 PF07219 HemY protein N-terminus FORC55_0097 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FORC55_0098 PF02602 Uroporphyrinogen-III synthase HemD FORC55_0099 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FORC55_0099 PF03900 Porphobilinogen deaminase, C-terminal domain FORC55_0100 PF01295 Adenylate cyclase, class-I FORC55_0100 PF12633 Adenylate cyclase NT domain FORC55_0101 PF01491 Frataxin-like domain FORC55_0102 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FORC55_0102 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FORC55_0103 PF01678 Diaminopimelate epimerase FORC55_0104 PF04340 Protein of unknown function, DUF484 FORC55_0105 PF02899 Phage integrase, N-terminal SAM-like domain FORC55_0105 PF00589 Phage integrase family FORC55_0106 PF13419 Haloacid dehalogenase-like hydrolase FORC55_0107 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0107 PF10442 FIST C domain FORC55_0107 PF00563 EAL domain FORC55_0107 PF08495 FIST N domain FORC55_0111 PF12146 Serine aminopeptidase, S33 FORC55_0112 PF01810 LysE type translocator FORC55_0113 PF00563 EAL domain FORC55_0113 PF08668 HDOD domain FORC55_0114 PF00210 Ferritin-like domain FORC55_0121 PF00448 SRP54-type protein, GTPase domain FORC55_0121 PF02881 SRP54-type protein, helical bundle domain FORC55_0122 PF00005 ABC transporter FORC55_0123 PF18075 FtsX extracellular domain FORC55_0124 PF04542 Sigma-70 region 2 FORC55_0124 PF00140 Sigma-70 factor, region 1.2 FORC55_0124 PF04545 Sigma-70, region 4 FORC55_0125 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC55_0126 PF00440 Bacterial regulatory proteins, tetR family FORC55_0128 PF05958 tRNA (Uracil-5-)-methyltransferase FORC55_0129 PF00593 TonB dependent receptor FORC55_0129 PF07715 TonB-dependent Receptor Plug Domain FORC55_0130 PF01797 Transposase IS200 like FORC55_0131 PF04151 Bacterial pre-peptidase C-terminal domain FORC55_0131 PF05922 Peptidase inhibitor I9 FORC55_0131 PF00082 Subtilase family FORC55_0132 PF01177 Asp/Glu/Hydantoin racemase FORC55_0135 PF00962 Adenosine/AMP deaminase FORC55_0136 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0136 PF03707 Bacterial signalling protein N terminal repeat FORC55_0136 PF13188 PAS domain FORC55_0136 PF00563 EAL domain FORC55_0137 PF00158 Sigma-54 interaction domain FORC55_0137 PF00072 Response regulator receiver domain FORC55_0137 PF02954 Bacterial regulatory protein, Fis family FORC55_0138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0138 PF00989 PAS fold FORC55_0138 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0140 PF03951 Glutamine synthetase, beta-Grasp domain FORC55_0140 PF00120 Glutamine synthetase, catalytic domain FORC55_0144 PF03631 Virulence factor BrkB FORC55_0145 PF02580 D-Tyr-tRNA(Tyr) deacylase FORC55_0146 PF09500 Putative thioesterase (yiiD_Cterm) FORC55_0146 PF00583 Acetyltransferase (GNAT) family FORC55_0148 PF01293 Phosphoenolpyruvate carboxykinase FORC55_0149 PF01430 Hsp33 protein FORC55_0150 PF01479 S4 domain FORC55_0151 PF11356 Type II secretion system protein C FORC55_0152 PF03958 Bacterial type II/III secretion system short domain FORC55_0152 PF00263 Bacterial type II and III secretion system protein FORC55_0153 PF00437 Type II/IV secretion system protein FORC55_0154 PF00482 Type II secretion system (T2SS), protein F FORC55_0155 PF07963 Prokaryotic N-terminal methylation motif FORC55_0155 PF08334 Type II secretion system (T2SS), protein G FORC55_0156 PF12019 Type II transport protein GspH FORC55_0157 PF02501 Type II secretion system (T2SS), protein I FORC55_0157 PF07963 Prokaryotic N-terminal methylation motif FORC55_0158 PF11612 Type II secretion system (T2SS), protein J FORC55_0158 PF07963 Prokaryotic N-terminal methylation motif FORC55_0159 PF03934 Type II secretion system (T2SS), protein K FORC55_0160 PF05134 Type II secretion system (T2SS), protein L FORC55_0160 PF12693 GspL periplasmic domain FORC55_0161 PF04612 Type II secretion system (T2SS), protein M FORC55_0162 PF01203 Type II secretion system (T2SS), protein N FORC55_0163 PF00459 Inositol monophosphatase family FORC55_0164 PF00293 NUDIX domain FORC55_0165 PF01521 Iron-sulphur cluster biosynthesis FORC55_0165 PF01106 NifU-like domain FORC55_0166 PF00156 Phosphoribosyl transferase domain FORC55_0167 PF00561 alpha/beta hydrolase fold FORC55_0169 PF16921 Tex protein YqgF-like domain FORC55_0169 PF09371 Tex-like protein N-terminal domain FORC55_0169 PF17674 HHH domain FORC55_0169 PF00575 S1 RNA binding domain FORC55_0170 PF03449 Transcription elongation factor, N-terminal FORC55_0170 PF01272 Transcription elongation factor, GreA/GreB, C-term FORC55_0173 PF00005 ABC transporter FORC55_0174 PF02653 Branched-chain amino acid transport system / permease component FORC55_0175 PF00933 Glycosyl hydrolase family 3 N terminal domain FORC55_0175 PF01915 Glycosyl hydrolase family 3 C-terminal domain FORC55_0176 PF00704 Glycosyl hydrolases family 18 FORC55_0176 PF08329 Chitinase A, N-terminal domain FORC55_0177 PF00486 Transcriptional regulatory protein, C terminal FORC55_0177 PF00072 Response regulator receiver domain FORC55_0178 PF00672 HAMP domain FORC55_0178 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0179 PF00860 Permease family FORC55_0180 PF00271 Helicase conserved C-terminal domain FORC55_0180 PF17191 RecG wedge domain FORC55_0180 PF00270 DEAD/DEAH box helicase FORC55_0181 PF02824 TGS domain FORC55_0181 PF13291 ACT domain FORC55_0181 PF04607 Region found in RelA / SpoT proteins FORC55_0182 PF01192 RNA polymerase Rpb6 FORC55_0183 PF00625 Guanylate kinase FORC55_0184 PF02592 Putative vitamin uptake transporter FORC55_0185 PF00474 Sodium:solute symporter family FORC55_0187 PF03471 Transporter associated domain FORC55_0187 PF02080 TrkA-C domain FORC55_0187 PF00999 Sodium/hydrogen exchanger family FORC55_0188 PF00072 Response regulator receiver domain FORC55_0188 PF00196 Bacterial regulatory proteins, luxR family FORC55_0189 PF02683 Cytochrome C biogenesis protein transmembrane region FORC55_0189 PF11412 Disulphide bond corrector protein DsbC FORC55_0190 PF03714 Bacterial pullanase-associated domain FORC55_0190 PF11852 Domain of unknown function (DUF3372) FORC55_0190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FORC55_0190 PF17967 Pullulanase N2 domain FORC55_0190 PF18494 Pullulanase Ins domain FORC55_0192 PF03605 Anaerobic c4-dicarboxylate membrane transporter FORC55_0193 PF00206 Lyase FORC55_0193 PF10415 Fumarase C C-terminus FORC55_0194 PF17158 Membrane-associated sensor, integral membrane domain FORC55_0194 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0195 PF04186 FxsA cytoplasmic membrane protein FORC55_0196 PF00588 SpoU rRNA Methylase family FORC55_0197 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FORC55_0197 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FORC55_0198 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0198 PF00672 HAMP domain FORC55_0198 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0198 PF16527 Two-component sensor protein CpxA, periplasmic domain FORC55_0199 PF00486 Transcriptional regulatory protein, C terminal FORC55_0199 PF00072 Response regulator receiver domain FORC55_0201 PF01545 Cation efflux family FORC55_0201 PF16916 Dimerisation domain of Zinc Transporter FORC55_0202 PF00365 Phosphofructokinase FORC55_0203 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FORC55_0204 PF06005 Cell division protein ZapB FORC55_0205 PF02219 Methylenetetrahydrofolate reductase FORC55_0206 PF03447 Homoserine dehydrogenase, NAD binding domain FORC55_0206 PF00696 Amino acid kinase family FORC55_0206 PF00742 Homoserine dehydrogenase FORC55_0207 PF01053 Cys/Met metabolism PLP-dependent enzyme FORC55_0208 PF01340 Met Apo-repressor, MetJ FORC55_0209 PF03949 Malic enzyme, NAD binding domain FORC55_0209 PF00390 Malic enzyme, N-terminal domain FORC55_0210 PF01197 Ribosomal protein L31 FORC55_0211 PF00270 DEAD/DEAH box helicase FORC55_0211 PF17764 3′ DNA-binding domain (3′BD) FORC55_0211 PF00271 Helicase conserved C-terminal domain FORC55_0211 PF18074 Primosomal protein N C-terminal domain FORC55_0211 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FORC55_0212 PF00356 Bacterial regulatory proteins, lacI family FORC55_0213 PF05036 Sporulation related domain FORC55_0214 PF00227 Proteasome subunit FORC55_0215 PF07724 AAA domain (Cdc48 subfamily) FORC55_0215 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_0215 PF10431 C-terminal, D2-small domain, of ClpB protein FORC55_0216 PF01040 UbiA prenyltransferase family FORC55_0217 PF03737 Aldolase/RraA FORC55_0219 PF00121 Triosephosphate isomerase FORC55_0223 PF08220 DeoR-like helix-turn-helix domain FORC55_0223 PF00455 DeoR C terminal sensor domain FORC55_0224 PF00166 Chaperonin 10 Kd subunit FORC55_0225 PF00118 TCP-1/cpn60 chaperonin family FORC55_0227 PF04055 Radical SAM superfamily FORC55_0228 PF09285 Elongation factor P, C-terminal FORC55_0228 PF01132 Elongation factor P (EF-P) OB domain FORC55_0228 PF08207 Elongation factor P (EF-P) KOW-like domain FORC55_0229 PF02313 Fumarate reductase subunit D FORC55_0230 PF02300 Fumarate reductase subunit C FORC55_0231 PF13183 4Fe-4S dicluster domain FORC55_0231 PF13085 2Fe-2S iron-sulfur cluster binding domain FORC55_0232 PF00890 FAD binding domain FORC55_0232 PF02910 Fumarate reductase flavoprotein C-term FORC55_0233 PF00152 tRNA synthetases class II (D, K and N) FORC55_0234 PF00581 Rhodanese-like domain FORC55_0235 PF02556 Preprotein translocase subunit SecB FORC55_0236 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FORC55_0236 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FORC55_0237 PF06426 Serine acetyltransferase, N-terminal FORC55_0237 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_0239 PF00311 Phosphoenolpyruvate carboxylase FORC55_0240 PF01546 Peptidase family M20/M25/M40 FORC55_0240 PF07687 Peptidase dimerisation domain FORC55_0241 PF01118 Semialdehyde dehydrogenase, NAD binding domain FORC55_0241 PF02774 Semialdehyde dehydrogenase, dimerisation domain FORC55_0242 PF00696 Amino acid kinase family FORC55_0243 PF00764 Arginosuccinate synthase FORC55_0244 PF00206 Lyase FORC55_0244 PF14698 Argininosuccinate lyase C-terminal FORC55_0246 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC55_0246 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0247 PF08534 Redoxin FORC55_0247 PF00462 Glutaredoxin FORC55_0248 PF03466 LysR substrate binding domain FORC55_0248 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0249 PF17092 Penicillin-binding protein OB-like domain FORC55_0249 PF00912 Transglycosylase FORC55_0249 PF00905 Penicillin binding protein transpeptidase domain FORC55_0254 PF07660 Secretin and TonB N terminus short domain FORC55_0254 PF03958 Bacterial type II/III secretion system short domain FORC55_0254 PF00263 Bacterial type II and III secretion system protein FORC55_0254 PF11741 AMIN domain FORC55_0255 PF01202 Shikimate kinase FORC55_0256 PF01761 3-dehydroquinate synthase FORC55_0258 PF02086 D12 class N6 adenine-specific DNA methyltransferase FORC55_0259 PF00834 Ribulose-phosphate 3 epimerase family FORC55_0260 PF13419 Haloacid dehalogenase-like hydrolase FORC55_0261 PF00579 tRNA synthetases class I (W and Y) FORC55_0264 PF00919 Uncharacterized protein family UPF0004 FORC55_0264 PF04055 Radical SAM superfamily FORC55_0264 PF18693 TRAM domain FORC55_0265 PF00117 Glutamine amidotransferase class-I FORC55_0266 PF00202 Aminotransferase class-III FORC55_0267 PF04958 Arginine N-succinyltransferase beta subunit FORC55_0268 PF00171 Aldehyde dehydrogenase family FORC55_0270 PF00027 Cyclic nucleotide-binding domain FORC55_0270 PF13545 Crp-like helix-turn-helix domain FORC55_0271 PF00485 Phosphoribulokinase / Uridine kinase family FORC55_0272 PF06794 Uncharacterised protein family (UPF0270) FORC55_0273 PF00561 alpha/beta hydrolase fold FORC55_0275 PF00005 ABC transporter FORC55_0275 PF12848 ABC transporter FORC55_0276 PF02525 Flavodoxin-like fold FORC55_0277 PF00999 Sodium/hydrogen exchanger family FORC55_0277 PF02254 TrkA-N domain FORC55_0278 PF00999 Sodium/hydrogen exchanger family FORC55_0278 PF02254 TrkA-N domain FORC55_0280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC55_0281 PF01112 Asparaginase FORC55_0282 PF00709 Adenylosuccinate synthetase FORC55_0283 PF08238 Sel1 repeat FORC55_0284 PF00884 Sulfatase FORC55_0284 PF11893 Domain of unknown function (DUF3413) FORC55_0285 PF00575 S1 RNA binding domain FORC55_0285 PF17876 Cold shock domain FORC55_0285 PF00773 RNB domain FORC55_0285 PF08206 Ribonuclease B OB domain FORC55_0285 PF08461 Ribonuclease R winged-helix domain FORC55_0286 PF00588 SpoU rRNA Methylase family FORC55_0286 PF08032 RNA 2'-O ribose methyltransferase substrate binding FORC55_0287 PF00338 Ribosomal protein S10p/S20e FORC55_0288 PF00297 Ribosomal protein L3 FORC55_0289 PF00573 Ribosomal protein L4/L1 family FORC55_0290 PF00276 Ribosomal protein L23 FORC55_0291 PF00181 Ribosomal Proteins L2, RNA binding domain FORC55_0291 PF03947 Ribosomal Proteins L2, C-terminal domain FORC55_0292 PF00203 Ribosomal protein S19 FORC55_0293 PF00237 Ribosomal protein L22p/L17e FORC55_0294 PF00189 Ribosomal protein S3, C-terminal domain FORC55_0294 PF07650 KH domain FORC55_0295 PF00252 Ribosomal protein L16p/L10e FORC55_0296 PF00831 Ribosomal L29 protein FORC55_0297 PF00366 Ribosomal protein S17 FORC55_0298 PF00238 Ribosomal protein L14p/L23e FORC55_0299 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FORC55_0299 PF00467 KOW motif FORC55_0300 PF00281 Ribosomal protein L5 FORC55_0300 PF00673 ribosomal L5P family C-terminus FORC55_0301 PF00253 Ribosomal protein S14p/S29e FORC55_0302 PF00410 Ribosomal protein S8 FORC55_0303 PF00347 Ribosomal protein L6 FORC55_0304 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FORC55_0305 PF03719 Ribosomal protein S5, C-terminal domain FORC55_0305 PF00333 Ribosomal protein S5, N-terminal domain FORC55_0306 PF00327 Ribosomal protein L30p/L7e FORC55_0307 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FORC55_0308 PF00344 SecY translocase FORC55_0309 PF00444 Ribosomal protein L36 FORC55_0310 PF00416 Ribosomal protein S13/S18 FORC55_0311 PF00411 Ribosomal protein S11 FORC55_0312 PF01479 S4 domain FORC55_0312 PF00163 Ribosomal protein S4/S9 N-terminal domain FORC55_0313 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FORC55_0313 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FORC55_0313 PF01000 RNA polymerase Rpb3/RpoA insert domain FORC55_0314 PF01196 Ribosomal protein L17 FORC55_0316 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC55_0316 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FORC55_0317 PF08525 Opacity-associated protein A N-terminal motif FORC55_0317 PF04225 Opacity-associated protein A LysM-like domain FORC55_0318 PF00892 EamA-like transporter family FORC55_0319 PF13673 Acetyltransferase (GNAT) domain FORC55_0320 PF03880 DbpA RNA binding domain FORC55_0320 PF00270 DEAD/DEAH box helicase FORC55_0320 PF00271 Helicase conserved C-terminal domain FORC55_0322 PF02872 5'-nucleotidase, C-terminal domain FORC55_0322 PF00149 Calcineurin-like phosphoesterase FORC55_0323 PF14824 Sirohaem biosynthesis protein central FORC55_0323 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC55_0323 PF10414 Sirohaem synthase dimerisation region FORC55_0324 PF01507 Phosphoadenosine phosphosulfate reductase family FORC55_0325 PF00009 Elongation factor Tu GTP binding domain FORC55_0330 PF00005 ABC transporter FORC55_0332 PF10795 Protein of unknown function (DUF2607) FORC55_0333 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FORC55_0334 PF01625 Peptide methionine sulfoxide reductase FORC55_0335 PF07244 Surface antigen variable number repeat FORC55_0335 PF01103 Surface antigen FORC55_0335 PF17243 POTRA domain TamA domain 1 FORC55_0336 PF04357 TamB, inner membrane protein subunit of TAM complex FORC55_0337 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FORC55_0338 PF00719 Inorganic pyrophosphatase FORC55_0339 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FORC55_0340 PF08245 Mur ligase middle domain FORC55_0340 PF02875 Mur ligase family, glutamate ligase domain FORC55_0340 PF01225 Mur ligase family, catalytic domain FORC55_0341 PF02441 Flavoprotein FORC55_0343 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_0344 PF00005 ABC transporter FORC55_0345 PF04751 Protein of unknown function (DUF615) FORC55_0346 PF01523 Putative modulator of DNA gyrase FORC55_0347 PF00571 CBS domain FORC55_0347 PF03448 MgtE intracellular N domain FORC55_0347 PF01769 Divalent cation transporter FORC55_0348 PF00381 PTS HPr component phosphorylation site FORC55_0349 PF03668 P-loop ATPase protein family FORC55_0350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC55_0351 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FORC55_0352 PF04552 Sigma-54, DNA binding domain FORC55_0352 PF04963 Sigma-54 factor, core binding domain FORC55_0352 PF00309 Sigma-54 factor, Activator interacting domain (AID) FORC55_0353 PF12399 Branched-chain amino acid ATP-binding cassette transporter FORC55_0353 PF00005 ABC transporter FORC55_0354 PF03968 OstA-like protein FORC55_0357 PF00571 CBS domain FORC55_0357 PF01380 SIS domain FORC55_0358 PF01699 Sodium/calcium exchanger protein FORC55_0359 PF00005 ABC transporter FORC55_0360 PF02405 Permease MlaE FORC55_0361 PF02470 MlaD protein FORC55_0362 PF05494 MlaC protein FORC55_0364 PF01722 BolA-like protein FORC55_0365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FORC55_0366 PF01553 Acyltransferase FORC55_0367 PF01042 Endoribonuclease L-PSP FORC55_0368 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FORC55_0368 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FORC55_0369 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FORC55_0369 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FORC55_0370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FORC55_0370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FORC55_0371 PF13638 PIN domain FORC55_0371 PF02562 PhoH-like protein FORC55_0373 PF18337 RapA N-terminal Tudor like domain FORC55_0373 PF00176 SNF2 family N-terminal domain FORC55_0373 PF12137 RNA polymerase recycling family C-terminal FORC55_0373 PF00271 Helicase conserved C-terminal domain FORC55_0373 PF18339 RapA N-terminal Tudor like domain 1 FORC55_0374 PF00849 RNA pseudouridylate synthase FORC55_0375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC55_0375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC55_0376 PF00133 tRNA synthetases class I (I, L, M and V) FORC55_0376 PF08264 Anticodon-binding domain of tRNA FORC55_0376 PF10458 Valyl tRNA synthetase tRNA binding arm FORC55_0377 PF04364 DNA polymerase III chi subunit, HolC FORC55_0378 PF02789 Cytosol aminopeptidase family, N-terminal domain FORC55_0378 PF00883 Cytosol aminopeptidase family, catalytic domain FORC55_0379 PF03739 Lipopolysaccharide export system permease LptF/LptG FORC55_0380 PF03739 Lipopolysaccharide export system permease LptF/LptG FORC55_0382 PF00072 Response regulator receiver domain FORC55_0385 PF00694 Aconitase C-terminal domain FORC55_0386 PF00330 Aconitase family (aconitate hydratase) FORC55_0387 PF00180 Isocitrate/isopropylmalate dehydrogenase FORC55_0388 PF00682 HMGL-like FORC55_0388 PF08502 LeuA allosteric (dimerisation) domain FORC55_0390 PF01569 PAP2 superfamily FORC55_0392 PF03466 LysR substrate binding domain FORC55_0392 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0393 PF00501 AMP-binding enzyme FORC55_0394 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC55_0394 PF00205 Thiamine pyrophosphate enzyme, central domain FORC55_0394 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC55_0395 PF10369 Small subunit of acetolactate synthase FORC55_0396 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC55_0396 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC55_0396 PF01842 ACT domain FORC55_0397 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FORC55_0398 PF01812 5-formyltetrahydrofolate cyclo-ligase family FORC55_0399 PF05164 Cell division protein ZapA FORC55_0400 PF03695 Uncharacterised protein family (UPF0149) FORC55_0401 PF01494 FAD binding domain FORC55_0402 PF01494 FAD binding domain FORC55_0405 PF03937 Flavinator of succinate dehydrogenase FORC55_0407 PF02910 Fumarate reductase flavoprotein C-term FORC55_0407 PF00890 FAD binding domain FORC55_0408 PF04542 Sigma-70 region 2 FORC55_0408 PF08281 Sigma-70, region 4 FORC55_0409 PF03873 Anti sigma-E protein RseA, C-terminal domain FORC55_0409 PF03872 Anti sigma-E protein RseA, N-terminal domain FORC55_0410 PF03888 MucB/RseB N-terminal domain FORC55_0410 PF17188 MucB/RseB C-terminal domain FORC55_0412 PF00679 Elongation factor G C-terminus FORC55_0412 PF00009 Elongation factor Tu GTP binding domain FORC55_0412 PF03144 Elongation factor Tu domain 2 FORC55_0412 PF06421 GTP-binding protein LepA C-terminus FORC55_0413 PF10502 Signal peptidase, peptidase S26 FORC55_0414 PF00035 Double-stranded RNA binding motif FORC55_0414 PF14622 Ribonuclease-III-like FORC55_0415 PF07650 KH domain FORC55_0415 PF01926 50S ribosome-binding GTPase FORC55_0416 PF11967 Recombination protein O N terminal FORC55_0416 PF02565 Recombination protein O C terminal FORC55_0417 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FORC55_0418 PF01648 4'-phosphopantetheinyl transferase superfamily FORC55_0422 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0423 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC55_0423 PF00672 HAMP domain FORC55_0423 PF00072 Response regulator receiver domain FORC55_0423 PF01627 Hpt domain FORC55_0423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0423 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0424 PF05958 tRNA (Uracil-5-)-methyltransferase FORC55_0424 PF01938 TRAM domain FORC55_0425 PF02824 TGS domain FORC55_0425 PF04607 Region found in RelA / SpoT proteins FORC55_0425 PF13291 ACT domain FORC55_0426 PF03819 MazG nucleotide pyrophosphohydrolase domain FORC55_0427 PF00117 Glutamine amidotransferase class-I FORC55_0427 PF06418 CTP synthase N-terminus FORC55_0428 PF00113 Enolase, C-terminal TIM barrel domain FORC55_0428 PF03952 Enolase, N-terminal domain FORC55_0429 PF01966 HD domain FORC55_0429 PF12627 Probable RNA and SrmB- binding site of polymerase A FORC55_0429 PF01743 Poly A polymerase head domain FORC55_0430 PF01471 Putative peptidoglycan binding domain FORC55_0430 PF13401 AAA domain FORC55_0432 PF08239 Bacterial SH3 domain FORC55_0433 PF01384 Phosphate transporter family FORC55_0434 PF01865 Protein of unknown function DUF47 FORC55_0435 PF01928 CYTH domain FORC55_0436 PF00672 HAMP domain FORC55_0436 PF02743 Cache domain FORC55_0436 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0437 PF03710 Glutamate-ammonia ligase adenylyltransferase FORC55_0437 PF08335 GlnD PII-uridylyltransferase FORC55_0438 PF01467 Cytidylyltransferase-like FORC55_0438 PF00294 pfkB family carbohydrate kinase FORC55_0439 PF02321 Outer membrane efflux protein FORC55_0440 PF00293 NUDIX domain FORC55_0441 PF06853 Protein of unknown function (DUF1249) FORC55_0442 PF00149 Calcineurin-like phosphoesterase FORC55_0443 PF05728 Uncharacterised protein family (UPF0227) FORC55_0444 PF00986 DNA gyrase B subunit, carboxyl terminus FORC55_0444 PF01751 Toprim domain FORC55_0444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0444 PF00204 DNA gyrase B FORC55_0445 PF00521 DNA gyrase/topoisomerase IV, subunit A FORC55_0445 PF03989 DNA gyrase C-terminal domain, beta-propeller FORC55_0446 PF03884 DNA gyrase inhibitor YacG FORC55_0447 PF07072 Cell division protein FORC55_0448 PF01121 Dephospho-CoA kinase FORC55_0449 PF06750 Bacterial Peptidase A24 N-terminal domain FORC55_0449 PF01478 Type IV leader peptidase family FORC55_0450 PF00482 Type II secretion system (T2SS), protein F FORC55_0451 PF00437 Type II/IV secretion system protein FORC55_0451 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FORC55_0453 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FORC55_0453 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FORC55_0454 PF01510 N-acetylmuramoyl-L-alanine amidase FORC55_0455 PF00258 Flavodoxin FORC55_0456 PF00589 Phage integrase family FORC55_0456 PF02899 Phage integrase, N-terminal SAM-like domain FORC55_0457 PF13098 Thioredoxin-like domain FORC55_0457 PF10411 Disulfide bond isomerase protein N-terminus FORC55_0458 PF17768 RecJ OB domain FORC55_0458 PF02272 DHHA1 domain FORC55_0458 PF01368 DHH family FORC55_0459 PF02872 5'-nucleotidase, C-terminal domain FORC55_0459 PF00149 Calcineurin-like phosphoesterase FORC55_0460 PF07729 FCD domain FORC55_0460 PF00392 Bacterial regulatory proteins, gntR family FORC55_0461 PF00456 Transketolase, thiamine diphosphate binding domain FORC55_0461 PF17831 Pyruvate dehydrogenase E1 component middle domain FORC55_0462 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FORC55_0462 PF00364 Biotin-requiring enzyme FORC55_0462 PF02817 e3 binding domain FORC55_0463 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0463 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC55_0464 PF01795 MraW methylase family FORC55_0465 PF04999 Cell division protein FtsL FORC55_0466 PF00905 Penicillin binding protein transpeptidase domain FORC55_0466 PF03717 Penicillin-binding Protein dimerisation domain FORC55_0467 PF01225 Mur ligase family, catalytic domain FORC55_0467 PF02875 Mur ligase family, glutamate ligase domain FORC55_0467 PF08245 Mur ligase middle domain FORC55_0468 PF01225 Mur ligase family, catalytic domain FORC55_0468 PF02875 Mur ligase family, glutamate ligase domain FORC55_0468 PF08245 Mur ligase middle domain FORC55_0469 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FORC55_0469 PF00953 Glycosyl transferase family 4 FORC55_0470 PF02875 Mur ligase family, glutamate ligase domain FORC55_0470 PF08245 Mur ligase middle domain FORC55_0471 PF01098 Cell cycle protein FORC55_0472 PF03033 Glycosyltransferase family 28 N-terminal domain FORC55_0472 PF04101 Glycosyltransferase family 28 C-terminal domain FORC55_0473 PF01225 Mur ligase family, catalytic domain FORC55_0473 PF08245 Mur ligase middle domain FORC55_0473 PF02875 Mur ligase family, glutamate ligase domain FORC55_0474 PF08478 POTRA domain, FtsQ-type FORC55_0474 PF03799 Cell division protein FtsQ FORC55_0475 PF02491 SHS2 domain inserted in FTSA FORC55_0476 PF00091 Tubulin/FtsZ family, GTPase domain FORC55_0476 PF12327 FtsZ family, C-terminal domain FORC55_0477 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FORC55_0479 PF01043 SecA preprotein cross-linking domain FORC55_0479 PF07516 SecA Wing and Scaffold domain FORC55_0479 PF07517 SecA DEAD-like domain FORC55_0479 PF02810 SEC-C motif FORC55_0480 PF00293 NUDIX domain FORC55_0481 PF05173 Dihydrodipicolinate reductase, C-terminus FORC55_0481 PF01113 Dihydrodipicolinate reductase, N-terminus FORC55_0483 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FORC55_0483 PF00117 Glutamine amidotransferase class-I FORC55_0484 PF02142 MGS-like domain FORC55_0484 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FORC55_0484 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FORC55_0486 PF03783 Curli production assembly/transport component CsgG FORC55_0490 PF01925 Sulfite exporter TauE/SafE FORC55_0491 PF03466 LysR substrate binding domain FORC55_0491 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0492 PF03458 UPF0126 domain FORC55_0493 PF01497 Periplasmic binding protein FORC55_0495 PF01048 Phosphorylase superfamily FORC55_0497 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0497 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FORC55_0498 PF00310 Glutamine amidotransferases class-II FORC55_0498 PF04898 Glutamate synthase central domain FORC55_0498 PF01645 Conserved region in glutamate synthase FORC55_0498 PF01493 GXGXG motif FORC55_0499 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0499 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FORC55_0500 PF00310 Glutamine amidotransferases class-II FORC55_0500 PF04898 Glutamate synthase central domain FORC55_0500 PF01645 Conserved region in glutamate synthase FORC55_0500 PF01493 GXGXG motif FORC55_0501 PF04055 Radical SAM superfamily FORC55_0501 PF16199 Radical_SAM C-terminal domain FORC55_0502 PF00563 EAL domain FORC55_0502 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0502 PF01590 GAF domain FORC55_0502 PF00360 Phytochrome region FORC55_0503 PF01627 Hpt domain FORC55_0503 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0503 PF18415 Histidine kinase receptor ArcB trans-membrane domain FORC55_0503 PF00989 PAS fold FORC55_0503 PF00072 Response regulator receiver domain FORC55_0503 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0504 PF00072 Response regulator receiver domain FORC55_0504 PF00486 Transcriptional regulatory protein, C terminal FORC55_0506 PF03737 Aldolase/RraA FORC55_0508 PF00696 Amino acid kinase family FORC55_0508 PF01842 ACT domain FORC55_0508 PF13840 ACT domain FORC55_0508 PF00742 Homoserine dehydrogenase FORC55_0508 PF03447 Homoserine dehydrogenase, NAD binding domain FORC55_0509 PF08544 GHMP kinases C terminal FORC55_0509 PF00288 GHMP kinases N terminal domain FORC55_0510 PF00291 Pyridoxal-phosphate dependent enzyme FORC55_0510 PF14821 Threonine synthase N terminus FORC55_0511 PF01228 Glycine radical FORC55_0512 PF01261 Xylose isomerase-like TIM barrel FORC55_0513 PF03167 Uracil DNA glycosylase superfamily FORC55_0516 PF01235 Sodium:alanine symporter family FORC55_0517 PF03883 Peroxide stress protein YaaA FORC55_0518 PF01026 TatD related DNase FORC55_0519 PF01773 Na+ dependent nucleoside transporter N-terminus FORC55_0519 PF07662 Na+ dependent nucleoside transporter C-terminus FORC55_0519 PF07670 Nucleoside recognition FORC55_0521 PF01791 DeoC/LacD family aldolase FORC55_0522 PF02885 Glycosyl transferase family, helical bundle domain FORC55_0522 PF00591 Glycosyl transferase family, a/b domain FORC55_0522 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FORC55_0523 PF01676 Metalloenzyme superfamily FORC55_0524 PF01048 Phosphorylase superfamily FORC55_0526 PF18429 Domain of unknown function (DUF5609) FORC55_0528 PF18073 Rubredoxin metal binding domain FORC55_0529 PF03764 Elongation factor G, domain IV FORC55_0529 PF03144 Elongation factor Tu domain 2 FORC55_0529 PF00009 Elongation factor Tu GTP binding domain FORC55_0529 PF14492 Elongation Factor G, domain II FORC55_0529 PF00679 Elongation factor G C-terminus FORC55_0530 PF00501 AMP-binding enzyme FORC55_0531 PF00072 Response regulator receiver domain FORC55_0533 PF00703 Glycosyl hydrolases family 2 FORC55_0533 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FORC55_0533 PF02837 Glycosyl hydrolases family 2, sugar binding domain FORC55_0533 PF02929 Beta galactosidase small chain FORC55_0533 PF16353 Domain of unknown function(DUF4981) FORC55_0534 PF00356 Bacterial regulatory proteins, lacI family FORC55_0535 PF01588 Putative tRNA binding domain FORC55_0537 PF01544 CorA-like Mg2+ transporter protein FORC55_0538 PF02080 TrkA-C domain FORC55_0538 PF08443 RimK-like ATP-grasp domain FORC55_0538 PF18030 RimK PreATP-grasp domain FORC55_0539 PF00583 Acetyltransferase (GNAT) family FORC55_0541 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FORC55_0541 PF14602 Hexapeptide repeat of succinyl-transferase FORC55_0543 PF07130 YebG protein FORC55_0546 PF17946 RecC C-terminal domain FORC55_0547 PF13361 UvrD-like helicase C-terminal domain FORC55_0547 PF00580 UvrD/REP helicase N-terminal domain FORC55_0547 PF12705 PD-(D/E)XK nuclease superfamily FORC55_0548 PF13538 UvrD-like helicase C-terminal domain FORC55_0550 PF00583 Acetyltransferase (GNAT) family FORC55_0550 PF00696 Amino acid kinase family FORC55_0552 PF06725 3D domain FORC55_0552 PF03562 MltA specific insert domain FORC55_0553 PF00899 ThiF family FORC55_0554 PF02657 Fe-S metabolism associated domain FORC55_0555 PF00266 Aminotransferase class-V FORC55_0556 PF01965 DJ-1/PfpI family FORC55_0557 PF08546 Ketopantoate reductase PanE/ApbA C terminal FORC55_0557 PF02558 Ketopantoate reductase PanE/ApbA FORC55_0558 PF03502 Nucleoside-specific channel-forming protein, Tsx FORC55_0560 PF04545 Sigma-70, region 4 FORC55_0560 PF04542 Sigma-70 region 2 FORC55_0562 PF07690 Major Facilitator Superfamily FORC55_0563 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FORC55_0565 PF05175 Methyltransferase small domain FORC55_0566 PF01722 BolA-like protein FORC55_0567 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FORC55_0567 PF11973 NQRA C-terminal domain FORC55_0568 PF03116 NQR2, RnfD, RnfE family FORC55_0569 PF04205 FMN-binding domain FORC55_0570 PF02508 Rnf-Nqr subunit, membrane protein FORC55_0571 PF02508 Rnf-Nqr subunit, membrane protein FORC55_0572 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_0572 PF00175 Oxidoreductase NAD-binding domain FORC55_0572 PF00970 Oxidoreductase FAD-binding domain FORC55_0573 PF02424 ApbE family FORC55_0575 PF11798 IMS family HHH motif FORC55_0575 PF00817 impB/mucB/samB family FORC55_0577 PF17158 Membrane-associated sensor, integral membrane domain FORC55_0577 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0578 PF00209 Sodium:neurotransmitter symporter family FORC55_0579 PF01609 Transposase DDE domain FORC55_0579 PF13006 Insertion element 4 transposase N-terminal FORC55_0581 PF18030 RimK PreATP-grasp domain FORC55_0581 PF08443 RimK-like ATP-grasp domain FORC55_0582 PF18030 RimK PreATP-grasp domain FORC55_0582 PF08443 RimK-like ATP-grasp domain FORC55_0583 PF07687 Peptidase dimerisation domain FORC55_0583 PF01546 Peptidase family M20/M25/M40 FORC55_0584 PF00860 Permease family FORC55_0585 PF00156 Phosphoribosyl transferase domain FORC55_0587 PF07417 Sigma factor-binding transcriptional regulator Crl FORC55_0588 PF00696 Amino acid kinase family FORC55_0588 PF01472 PUA domain FORC55_0589 PF00171 Aldehyde dehydrogenase family FORC55_0590 PF03477 ATP cone domain FORC55_0591 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FORC55_0591 PF01872 RibD C-terminal domain FORC55_0592 PF00677 Lumazine binding domain FORC55_0593 PF00925 GTP cyclohydrolase II FORC55_0593 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FORC55_0594 PF00885 6,7-dimethyl-8-ribityllumazine synthase FORC55_0595 PF01029 NusB family FORC55_0596 PF00586 AIR synthase related protein, N-terminal domain FORC55_0596 PF02769 AIR synthase related protein, C-terminal domain FORC55_0597 PF04608 Phosphatidylglycerophosphatase A FORC55_0598 PF11944 Protein of unknown function (DUF3461) FORC55_0599 PF08335 GlnD PII-uridylyltransferase FORC55_0599 PF01966 HD domain FORC55_0599 PF01909 Nucleotidyltransferase domain FORC55_0600 PF00557 Metallopeptidase family M24 FORC55_0601 PF00318 Ribosomal protein S2 FORC55_0602 PF00889 Elongation factor TS FORC55_0603 PF00696 Amino acid kinase family FORC55_0604 PF01765 Ribosome recycling factor FORC55_0605 PF01255 Putative undecaprenyl diphosphate synthase FORC55_0607 PF13288 DXP reductoisomerase C-terminal domain FORC55_0607 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FORC55_0607 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FORC55_0608 PF02163 Peptidase family M50 FORC55_0608 PF17820 PDZ domain FORC55_0609 PF07244 Surface antigen variable number repeat FORC55_0609 PF01103 Surface antigen FORC55_0610 PF03938 Outer membrane protein (OmpH-like) FORC55_0611 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_0611 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FORC55_0612 PF07977 FabA-like domain FORC55_0613 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FORC55_0613 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_0614 PF02684 Lipid-A-disaccharide synthetase FORC55_0615 PF01351 Ribonuclease HII FORC55_0616 PF07733 Bacterial DNA polymerase III alpha NTPase domain FORC55_0616 PF14579 Helix-hairpin-helix motif FORC55_0616 PF02811 PHP domain FORC55_0616 PF01336 OB-fold nucleic acid binding domain FORC55_0616 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FORC55_0617 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FORC55_0618 PF11734 TilS substrate C-terminal domain FORC55_0618 PF09179 TilS substrate binding domain FORC55_0618 PF01171 PP-loop family FORC55_0619 PF00034 Cytochrome c FORC55_0620 PF05870 Phenolic acid decarboxylase (PAD) FORC55_0621 PF00543 Nitrogen regulatory protein P-II FORC55_0622 PF03372 Endonuclease/Exonuclease/phosphatase family FORC55_0623 PF01464 Transglycosylase SLT domain FORC55_0623 PF01476 LysM domain FORC55_0624 PF16123 Hydroxyacylglutathione hydrolase C-terminus FORC55_0624 PF00753 Metallo-beta-lactamase superfamily FORC55_0625 PF08241 Methyltransferase domain FORC55_0626 PF00075 RNase H FORC55_0627 PF00929 Exonuclease FORC55_0629 PF09317 Domain of unknown function (DUF1974) FORC55_0629 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FORC55_0629 PF02770 Acyl-CoA dehydrogenase, middle domain FORC55_0629 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FORC55_0630 PF13580 SIS domain FORC55_0631 PF13230 Glutamine amidotransferases class-II FORC55_0632 PF00551 Formyl transferase FORC55_0633 PF02769 AIR synthase related protein, C-terminal domain FORC55_0633 PF00586 AIR synthase related protein, N-terminal domain FORC55_0635 PF08448 PAS fold FORC55_0635 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0636 PF00849 RNA pseudouridylate synthase FORC55_0636 PF01479 S4 domain FORC55_0637 PF01713 Smr domain FORC55_0638 PF01963 TraB family FORC55_0639 PF02838 Glycosyl hydrolase family 20, domain 2 FORC55_0639 PF00728 Glycosyl hydrolase family 20, catalytic domain FORC55_0639 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FORC55_0639 PF03173 Putative carbohydrate binding domain FORC55_0641 PF00403 Heavy-metal-associated domain FORC55_0642 PF00749 tRNA synthetases class I (E and Q), catalytic domain FORC55_0643 PF01389 OmpA-like transmembrane domain FORC55_0643 PF00691 OmpA family FORC55_0645 PF07715 TonB-dependent Receptor Plug Domain FORC55_0646 PF08021 Siderophore-interacting FAD-binding domain FORC55_0646 PF04954 Siderophore-interacting protein FORC55_0647 PF00550 Phosphopantetheine attachment site FORC55_0647 PF00501 AMP-binding enzyme FORC55_0647 PF08242 Methyltransferase domain FORC55_0647 PF00668 Condensation domain FORC55_0654 PF00072 Response regulator receiver domain FORC55_0654 PF01584 CheW-like domain FORC55_0655 PF01739 CheR methyltransferase, SAM binding domain FORC55_0655 PF03705 CheR methyltransferase, all-alpha domain FORC55_0656 PF00460 Flagella basal body rod protein FORC55_0657 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC55_0657 PF00460 Flagella basal body rod protein FORC55_0658 PF03963 Flagellar hook capping protein - N-terminal region FORC55_0658 PF13860 FlgD Ig-like domain FORC55_0658 PF13861 FlgD Tudor-like domain FORC55_0659 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC55_0659 PF00460 Flagella basal body rod protein FORC55_0659 PF07559 Flagellar basal body protein FlaE FORC55_0660 PF00460 Flagella basal body rod protein FORC55_0660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC55_0661 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC55_0661 PF00460 Flagella basal body rod protein FORC55_0662 PF02107 Flagellar L-ring protein FORC55_0663 PF02119 Flagellar P-ring protein FORC55_0664 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FORC55_0664 PF10135 Rod binding protein FORC55_0665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC55_0665 PF07196 Flagellin hook IN motif FORC55_0667 PF07196 Flagellin hook IN motif FORC55_0667 PF00700 Bacterial flagellin C-terminal helical region FORC55_0667 PF00669 Bacterial flagellin N-terminal helical region FORC55_0668 PF00700 Bacterial flagellin C-terminal helical region FORC55_0668 PF00669 Bacterial flagellin N-terminal helical region FORC55_0668 PF07196 Flagellin hook IN motif FORC55_0669 PF01926 50S ribosome-binding GTPase FORC55_0669 PF06071 Protein of unknown function (DUF933) FORC55_0670 PF01195 Peptidyl-tRNA hydrolase FORC55_0671 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FORC55_0671 PF14572 Phosphoribosyl synthetase-associated domain FORC55_0672 PF00288 GHMP kinases N terminal domain FORC55_0672 PF08544 GHMP kinases C terminal FORC55_0673 PF03550 Outer membrane lipoprotein LolB FORC55_0674 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FORC55_0674 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FORC55_0674 PF01488 Shikimate / quinate 5-dehydrogenase FORC55_0675 PF03462 PCRF domain FORC55_0675 PF00472 RF-1 domain FORC55_0676 PF17827 PrmC N-terminal domain FORC55_0676 PF13847 Methyltransferase domain FORC55_0677 PF04247 Invasion gene expression up-regulator, SirB FORC55_0678 PF13369 Transglutaminase-like superfamily FORC55_0679 PF00793 DAHP synthetase I family FORC55_0680 PF02872 5'-nucleotidase, C-terminal domain FORC55_0680 PF00149 Calcineurin-like phosphoesterase FORC55_0681 PF04073 Aminoacyl-tRNA editing domain FORC55_0682 PF00860 Permease family FORC55_0685 PF03358 NADPH-dependent FMN reductase FORC55_0686 PF03960 ArsC family FORC55_0687 PF13181 Tetratricopeptide repeat FORC55_0687 PF01435 Peptidase family M48 FORC55_0689 PF01594 AI-2E family transporter FORC55_0690 PF01609 Transposase DDE domain FORC55_0690 PF13006 Insertion element 4 transposase N-terminal FORC55_0692 PF00672 HAMP domain FORC55_0692 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0692 PF02743 Cache domain FORC55_0693 PF00578 AhpC/TSA family FORC55_0695 PF00701 Dihydrodipicolinate synthetase family FORC55_0696 PF00701 Dihydrodipicolinate synthetase family FORC55_0697 PF06804 NlpB/DapX lipoprotein FORC55_0699 PF02557 D-alanyl-D-alanine carboxypeptidase FORC55_0700 PF01546 Peptidase family M20/M25/M40 FORC55_0700 PF07687 Peptidase dimerisation domain FORC55_0701 PF03960 ArsC family FORC55_0703 PF01797 Transposase IS200 like FORC55_0705 PF11143 Protein of unknown function (DUF2919) FORC55_0706 PF04261 Dyp-type peroxidase family FORC55_0707 PF00700 Bacterial flagellin C-terminal helical region FORC55_0707 PF07196 Flagellin hook IN motif FORC55_0707 PF00669 Bacterial flagellin N-terminal helical region FORC55_0708 PF00669 Bacterial flagellin N-terminal helical region FORC55_0708 PF07196 Flagellin hook IN motif FORC55_0708 PF00700 Bacterial flagellin C-terminal helical region FORC55_0709 PF00669 Bacterial flagellin N-terminal helical region FORC55_0709 PF07196 Flagellin hook IN motif FORC55_0709 PF00700 Bacterial flagellin C-terminal helical region FORC55_0710 PF03646 FlaG protein FORC55_0711 PF07195 Flagellar hook-associated protein 2 C-terminus FORC55_0711 PF02465 Flagellar hook-associated protein 2 N-terminus FORC55_0711 PF07196 Flagellin hook IN motif FORC55_0713 PF02561 Flagellar protein FliS FORC55_0714 PF02954 Bacterial regulatory protein, Fis family FORC55_0714 PF00158 Sigma-54 interaction domain FORC55_0714 PF00072 Response regulator receiver domain FORC55_0715 PF13493 Domain of unknown function (DUF4118) FORC55_0715 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0715 PF00989 PAS fold FORC55_0715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0715 PF08447 PAS fold FORC55_0715 PF13426 PAS domain FORC55_0716 PF00158 Sigma-54 interaction domain FORC55_0716 PF02954 Bacterial regulatory protein, Fis family FORC55_0716 PF00072 Response regulator receiver domain FORC55_0717 PF02049 Flagellar hook-basal body complex protein FliE FORC55_0718 PF01514 Secretory protein of YscJ/FliF family FORC55_0718 PF08345 Flagellar M-ring protein C-terminal FORC55_0719 PF01706 FliG C-terminal domain FORC55_0719 PF14842 FliG N-terminal domain FORC55_0719 PF14841 FliG middle domain FORC55_0720 PF02108 Flagellar assembly protein FliH FORC55_0721 PF18269 T3SS EscN ATPase C-terminal domain FORC55_0721 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC55_0724 PF03748 Flagellar basal body-associated protein FliL FORC55_0725 PF02154 Flagellar motor switch protein FliM FORC55_0725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FORC55_0726 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FORC55_0727 PF04347 Flagellar biosynthesis protein, FliO FORC55_0728 PF00813 FliP family FORC55_0729 PF01313 Bacterial export proteins, family 3 FORC55_0730 PF01311 Bacterial export proteins, family 1 FORC55_0731 PF01312 FlhB HrpN YscU SpaS Family FORC55_0732 PF01713 Smr domain FORC55_0733 PF05175 Methyltransferase small domain FORC55_0734 PF01264 Chorismate synthase FORC55_0735 PF03458 UPF0126 domain FORC55_0736 PF04315 Elongation factor P hydroxylase FORC55_0737 PF08891 YfcL protein FORC55_0738 PF03358 NADPH-dependent FMN reductase FORC55_0739 PF01266 FAD dependent oxidoreductase FORC55_0739 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FORC55_0740 PF00109 Beta-ketoacyl synthase, N-terminal domain FORC55_0740 PF02801 Beta-ketoacyl synthase, C-terminal domain FORC55_0741 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC55_0741 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC55_0741 PF11890 Domain of unknown function (DUF3410) FORC55_0742 PF01118 Semialdehyde dehydrogenase, NAD binding domain FORC55_0742 PF02774 Semialdehyde dehydrogenase, dimerisation domain FORC55_0743 PF01475 Ferric uptake regulator family FORC55_0745 PF03466 LysR substrate binding domain FORC55_0745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0746 PF03788 LrgA family FORC55_0747 PF04172 LrgB-like family FORC55_0748 PF00258 Flavodoxin FORC55_0750 PF12697 Alpha/beta hydrolase family FORC55_0751 PF03925 SeqA protein C-terminal domain FORC55_0751 PF17206 SeqA protein N-terminal domain FORC55_0752 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC55_0752 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC55_0752 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC55_0752 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC55_0754 PF01784 NIF3 (NGG1p interacting factor 3) FORC55_0755 PF00285 Citrate synthase, C-terminal domain FORC55_0756 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FORC55_0757 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FORC55_0758 PF00890 FAD binding domain FORC55_0758 PF02910 Fumarate reductase flavoprotein C-term FORC55_0759 PF13085 2Fe-2S iron-sulfur cluster binding domain FORC55_0760 PF00676 Dehydrogenase E1 component FORC55_0760 PF16870 2-oxoglutarate dehydrogenase C-terminal FORC55_0760 PF02779 Transketolase, pyrimidine binding domain FORC55_0760 PF16078 2-oxoglutarate dehydrogenase N-terminus FORC55_0761 PF02817 e3 binding domain FORC55_0761 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FORC55_0761 PF00364 Biotin-requiring enzyme FORC55_0762 PF08442 ATP-grasp domain FORC55_0762 PF00549 CoA-ligase FORC55_0763 PF02629 CoA binding domain FORC55_0763 PF00549 CoA-ligase FORC55_0764 PF00950 ABC 3 transport family FORC55_0765 PF00005 ABC transporter FORC55_0766 PF01297 Zinc-uptake complex component A periplasmic FORC55_0767 PF12833 Helix-turn-helix domain FORC55_0767 PF02311 AraC-like ligand binding domain FORC55_0768 PF04023 FeoA domain FORC55_0769 PF07670 Nucleoside recognition FORC55_0769 PF02421 Ferrous iron transport protein B FORC55_0769 PF07664 Ferrous iron transport protein B C terminus FORC55_0772 PF03485 Arginyl tRNA synthetase N terminal domain FORC55_0772 PF05746 DALR anticodon binding domain FORC55_0772 PF00750 tRNA synthetases class I (R) FORC55_0774 PF00675 Insulinase (Peptidase family M16) FORC55_0774 PF05193 Peptidase M16 inactive domain FORC55_0775 PF00300 Histidine phosphatase superfamily (branch 1) FORC55_0776 PF00771 FHIPEP family FORC55_0777 PF00448 SRP54-type protein, GTPase domain FORC55_0778 PF10609 NUBPL iron-transfer P-loop NTPase FORC55_0779 PF04539 Sigma-70 region 3 FORC55_0779 PF04542 Sigma-70 region 2 FORC55_0779 PF04545 Sigma-70, region 4 FORC55_0780 PF00072 Response regulator receiver domain FORC55_0781 PF04344 Chemotaxis phosphatase, CheZ FORC55_0782 PF01584 CheW-like domain FORC55_0782 PF02895 Signal transducing histidine kinase, homodimeric domain FORC55_0782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0782 PF01627 Hpt domain FORC55_0782 PF07194 P2 response regulator binding domain FORC55_0783 PF01339 CheB methylesterase FORC55_0783 PF00072 Response regulator receiver domain FORC55_0784 PF13614 AAA domain FORC55_0786 PF01584 CheW-like domain FORC55_0788 PF00005 ABC transporter FORC55_0789 PF03379 CcmB protein FORC55_0790 PF01578 Cytochrome C assembly protein FORC55_0791 PF04995 Heme exporter protein D (CcmD) FORC55_0792 PF03100 CcmE FORC55_0793 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FORC55_0793 PF01578 Cytochrome C assembly protein FORC55_0794 PF08534 Redoxin FORC55_0795 PF03918 Cytochrome C biogenesis protein FORC55_0797 PF04333 MlaA lipoprotein FORC55_0800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FORC55_0800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FORC55_0801 PF00462 Glutaredoxin FORC55_0802 PF01751 Toprim domain FORC55_0802 PF01131 DNA topoisomerase FORC55_0803 PF00850 Histone deacetylase domain FORC55_0804 PF00884 Sulfatase FORC55_0804 PF11893 Domain of unknown function (DUF3413) FORC55_0805 PF07208 Protein of unknown function (DUF1414) FORC55_0806 PF04245 37-kD nucleoid-associated bacterial protein FORC55_0808 PF03553 Na+/H+ antiporter family FORC55_0809 PF02774 Semialdehyde dehydrogenase, dimerisation domain FORC55_0809 PF01118 Semialdehyde dehydrogenase, NAD binding domain FORC55_0810 PF01914 MarC family integral membrane protein FORC55_0811 PF00465 Iron-containing alcohol dehydrogenase FORC55_0811 PF00171 Aldehyde dehydrogenase family FORC55_0813 PF00916 Sulfate permease family FORC55_0813 PF01740 STAS domain FORC55_0814 PF00575 S1 RNA binding domain FORC55_0814 PF12111 Polyribonucleotide phosphorylase C terminal FORC55_0814 PF10150 Ribonuclease E/G family FORC55_0815 PF01479 S4 domain FORC55_0815 PF00849 RNA pseudouridylate synthase FORC55_0816 PF02545 Maf-like protein FORC55_0817 PF02620 Large ribosomal RNA subunit accumulation protein YceD FORC55_0818 PF01783 Ribosomal L32p protein family FORC55_0819 PF02504 Fatty acid synthesis protein FORC55_0820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FORC55_0820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FORC55_0821 PF00698 Acyl transferase domain FORC55_0823 PF00550 Phosphopantetheine attachment site FORC55_0824 PF00109 Beta-ketoacyl synthase, N-terminal domain FORC55_0824 PF02801 Beta-ketoacyl synthase, C-terminal domain FORC55_0825 PF01063 Amino-transferase class IV FORC55_0826 PF02618 YceG-like family FORC55_0827 PF02223 Thymidylate kinase FORC55_0828 PF09115 DNA polymerase III, delta subunit, C terminal FORC55_0829 PF01026 TatD related DNase FORC55_0830 PF00367 phosphotransferase system, EIIB FORC55_0830 PF02378 Phosphotransferase system, EIIC FORC55_0831 PF00209 Sodium:neurotransmitter symporter family FORC55_0833 PF01734 Patatin-like phospholipase FORC55_0834 PF00224 Pyruvate kinase, barrel domain FORC55_0834 PF02887 Pyruvate kinase, alpha/beta domain FORC55_0835 PF00480 ROK family FORC55_0836 PF00072 Response regulator receiver domain FORC55_0836 PF01584 CheW-like domain FORC55_0839 PF13847 Methyltransferase domain FORC55_0841 PF01263 Aldose 1-epimerase FORC55_0842 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC55_0842 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC55_0843 PF01641 SelR domain FORC55_0845 PF07023 Protein of unknown function (DUF1315) FORC55_0846 PF17763 Glutaminase/Asparaginase C-terminal domain FORC55_0846 PF00710 Asparaginase, N-terminal FORC55_0847 PF01343 Peptidase family S49 FORC55_0848 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0848 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FORC55_0849 PF00551 Formyl transferase FORC55_0849 PF01842 ACT domain FORC55_0851 PF13307 Helicase C-terminal domain FORC55_0851 PF04851 Type III restriction enzyme, res subunit FORC55_0852 PF00814 Glycoprotease family FORC55_0855 PF00561 alpha/beta hydrolase fold FORC55_0856 PF00501 AMP-binding enzyme FORC55_0856 PF13193 AMP-binding enzyme C-terminal domain FORC55_0857 PF00570 HRDC domain FORC55_0857 PF01612 3'-5' exonuclease FORC55_0860 PF13286 Phosphohydrolase-associated domain FORC55_0860 PF01966 HD domain FORC55_0862 PF00155 Aminotransferase class I and II FORC55_0863 PF00425 chorismate binding enzyme FORC55_0864 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC55_0864 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC55_0864 PF16582 Middle domain of thiamine pyrophosphate FORC55_0865 PF12697 Alpha/beta hydrolase family FORC55_0866 PF00378 Enoyl-CoA hydratase/isomerase FORC55_0867 PF13378 Enolase C-terminal domain-like FORC55_0868 PF13193 AMP-binding enzyme C-terminal domain FORC55_0868 PF00501 AMP-binding enzyme FORC55_0869 PF03594 Benzoate membrane transport protein FORC55_0870 PF07690 Major Facilitator Superfamily FORC55_0874 PF04170 NlpE N-terminal domain FORC55_0875 PF03776 Septum formation topological specificity factor MinE FORC55_0876 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FORC55_0877 PF05209 Septum formation inhibitor MinC, N-terminal domain FORC55_0877 PF03775 Septum formation inhibitor MinC, C-terminal domain FORC55_0878 PF05166 YcgL domain FORC55_0879 PF13406 Transglycosylase SLT domain FORC55_0880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0880 PF03466 LysR substrate binding domain FORC55_0881 PF07670 Nucleoside recognition FORC55_0881 PF01773 Na+ dependent nucleoside transporter N-terminus FORC55_0881 PF07662 Na+ dependent nucleoside transporter C-terminus FORC55_0882 PF03264 NapC/NirT cytochrome c family, N-terminal region FORC55_0883 PF00384 Molybdopterin oxidoreductase FORC55_0883 PF01568 Molydopterin dinucleotide binding domain FORC55_0883 PF18364 Molybdopterin oxidoreductase N-terminal domain FORC55_0885 PF03466 LysR substrate binding domain FORC55_0885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0886 PF01494 FAD binding domain FORC55_0887 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FORC55_0888 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FORC55_0888 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FORC55_0896 PF03707 Bacterial signalling protein N terminal repeat FORC55_0896 PF00990 Diguanylate cyclase, GGDEF domain FORC55_0896 PF00563 EAL domain FORC55_0896 PF13188 PAS domain FORC55_0898 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FORC55_0899 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC55_0900 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FORC55_0901 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC55_0902 PF02954 Bacterial regulatory protein, Fis family FORC55_0902 PF00158 Sigma-54 interaction domain FORC55_0902 PF00072 Response regulator receiver domain FORC55_0903 PF00512 His Kinase A (phospho-acceptor) domain FORC55_0903 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_0903 PF02743 Cache domain FORC55_0905 PF05698 Bacterial trigger factor protein (TF) C-terminus FORC55_0905 PF05697 Bacterial trigger factor protein (TF) FORC55_0905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC55_0906 PF00574 Clp protease FORC55_0907 PF07724 AAA domain (Cdc48 subfamily) FORC55_0907 PF10431 C-terminal, D2-small domain, of ClpB protein FORC55_0907 PF06689 ClpX C4-type zinc finger FORC55_0908 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_0908 PF05362 Lon protease (S16) C-terminal proteolytic domain FORC55_0908 PF02190 ATP-dependent protease La (LON) substrate-binding domain FORC55_0909 PF00216 Bacterial DNA-binding protein FORC55_0910 PF13145 PPIC-type PPIASE domain FORC55_0912 PF02224 Cytidylate kinase FORC55_0913 PF00575 S1 RNA binding domain FORC55_0914 PF00216 Bacterial DNA-binding protein FORC55_0915 PF06305 Lipopolysaccharide assembly protein A domain FORC55_0916 PF18073 Rubredoxin metal binding domain FORC55_0917 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC55_0918 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_0919 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_0919 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_0920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_0921 PF00005 ABC transporter FORC55_0921 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_0922 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_0922 PF00005 ABC transporter FORC55_0925 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FORC55_0928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_0928 PF03466 LysR substrate binding domain FORC55_0930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FORC55_0930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FORC55_0931 PF01037 Lrp/AsnC ligand binding domain FORC55_0933 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FORC55_0933 PF17854 FtsK alpha domain FORC55_0933 PF09397 Ftsk gamma domain FORC55_0933 PF01580 FtsK/SpoIIIE family FORC55_0934 PF02600 Disulfide bond formation protein DsbB FORC55_0935 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FORC55_0936 PF07840 FadR C-terminal domain FORC55_0936 PF00392 Bacterial regulatory proteins, gntR family FORC55_0938 PF00672 HAMP domain FORC55_0938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0939 PF01230 HIT domain FORC55_0942 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FORC55_0942 PF13036 Peptidoglycan-synthase activator LpoB FORC55_0944 PF05728 Uncharacterised protein family (UPF0227) FORC55_0945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_0947 PF12563 Hemolytic toxin N terminal FORC55_0947 PF07968 Leukocidin/Hemolysin toxin family FORC55_0947 PF16458 Beta-prism lectin FORC55_0949 PF00271 Helicase conserved C-terminal domain FORC55_0949 PF03461 TRCF domain FORC55_0949 PF02559 CarD-like/TRCF domain FORC55_0949 PF00270 DEAD/DEAH box helicase FORC55_0949 PF17757 UvrB interaction domain FORC55_0951 PF02687 FtsX-like permease family FORC55_0951 PF12704 MacB-like periplasmic core domain FORC55_0952 PF00005 ABC transporter FORC55_0953 PF12704 MacB-like periplasmic core domain FORC55_0953 PF02687 FtsX-like permease family FORC55_0955 PF00753 Metallo-beta-lactamase superfamily FORC55_0955 PF03772 Competence protein FORC55_0955 PF13567 Domain of unknown function (DUF4131) FORC55_0956 PF00005 ABC transporter FORC55_0956 PF00664 ABC transporter transmembrane region FORC55_0957 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FORC55_0958 PF03966 Trm112p-like protein FORC55_0959 PF02348 Cytidylyltransferase FORC55_0960 PF04293 SpoVR like protein FORC55_0961 PF04285 Protein of unknown function (DUF444) FORC55_0962 PF06798 PrkA serine protein kinase C-terminal domain FORC55_0962 PF08298 PrkA AAA domain FORC55_0964 PF03887 YfbU domain FORC55_0966 PF04055 Radical SAM superfamily FORC55_0968 PF00672 HAMP domain FORC55_0968 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0968 PF12729 Four helix bundle sensory module for signal transduction FORC55_0970 PF02901 Pyruvate formate lyase-like FORC55_0970 PF01228 Glycine radical FORC55_0973 PF00005 ABC transporter FORC55_0974 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_0975 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_0976 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_0977 PF03372 Endonuclease/Exonuclease/phosphatase family FORC55_0978 PF00672 HAMP domain FORC55_0978 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_0979 PF10689 Protein of unknown function (DUF2496) FORC55_0980 PF07445 Primosomal replication protein priC FORC55_0981 PF01925 Sulfite exporter TauE/SafE FORC55_0982 PF06733 DEAD_2 FORC55_0982 PF13307 Helicase C-terminal domain FORC55_0983 PF13609 Gram-negative porin FORC55_0984 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FORC55_0985 PF02810 SEC-C motif FORC55_0986 PF08668 HDOD domain FORC55_0986 PF00563 EAL domain FORC55_0987 PF00149 Calcineurin-like phosphoesterase FORC55_0988 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FORC55_0989 PF09190 DALR domain FORC55_0989 PF01406 tRNA synthetases class I (C) catalytic domain FORC55_0990 PF02075 Crossover junction endodeoxyribonuclease RuvC FORC55_0991 PF07499 RuvA, C-terminal domain FORC55_0991 PF01330 RuvA N terminal domain FORC55_0992 PF17864 RuvB AAA lid domain FORC55_0992 PF05496 Holliday junction DNA helicase RuvB P-loop domain FORC55_0992 PF05491 RuvB C-terminal winged helix domain FORC55_0993 PF01654 Cytochrome bd terminal oxidase subunit I FORC55_0994 PF02322 Cytochrome bd terminal oxidase subunit II FORC55_0995 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FORC55_0996 PF03061 Thioesterase superfamily FORC55_0997 PF01618 MotA/TolQ/ExbB proton channel family FORC55_0998 PF02472 Biopolymer transport protein ExbD/TolR FORC55_1000 PF07676 WD40-like Beta Propeller Repeat FORC55_1000 PF04052 TolB amino-terminal domain FORC55_1001 PF00691 OmpA family FORC55_1003 PF02445 Quinolinate synthetase A protein FORC55_1005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1005 PF09308 LuxQ, periplasmic FORC55_1005 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1005 PF00072 Response regulator receiver domain FORC55_1006 PF06610 L-alanine exporter FORC55_1007 PF00171 Aldehyde dehydrogenase family FORC55_1008 PF00158 Sigma-54 interaction domain FORC55_1008 PF01590 GAF domain FORC55_1008 PF02954 Bacterial regulatory protein, Fis family FORC55_1009 PF09905 DNA-binding protein VF530 FORC55_1011 PF00875 DNA photolyase FORC55_1011 PF03441 FAD binding domain of DNA photolyase FORC55_1015 PF00873 AcrB/AcrD/AcrF family FORC55_1016 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC55_1018 PF02470 MlaD protein FORC55_1019 PF04403 Paraquat-inducible protein A FORC55_1020 PF08362 YcdC-like protein, C-terminal region FORC55_1020 PF00440 Bacterial regulatory proteins, tetR family FORC55_1021 PF00171 Aldehyde dehydrogenase family FORC55_1022 PF07383 Protein of unknown function (DUF1496) FORC55_1025 PF00440 Bacterial regulatory proteins, tetR family FORC55_1025 PF16295 Tetracyclin repressor-like, C-terminal domain FORC55_1026 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FORC55_1026 PF02770 Acyl-CoA dehydrogenase, middle domain FORC55_1026 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FORC55_1026 PF09317 Domain of unknown function (DUF1974) FORC55_1027 PF12241 Trans-2-enoyl-CoA reductase catalytic region FORC55_1027 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FORC55_1027 PF07055 Enoyl reductase FAD binding domain FORC55_1028 PF01176 Translation initiation factor 1A / IF-1 FORC55_1029 PF04377 Arginine-tRNA-protein transferase, C terminus FORC55_1029 PF04376 Arginine-tRNA-protein transferase, N terminus FORC55_1030 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FORC55_1032 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FORC55_1033 PF10692 Protein of unknown function (DUF2498) FORC55_1034 PF08272 Topoisomerase I zinc-ribbon-like FORC55_1034 PF01131 DNA topoisomerase FORC55_1034 PF01751 Toprim domain FORC55_1034 PF01396 Topoisomerase DNA binding C4 zinc finger FORC55_1035 PF00483 Nucleotidyl transferase FORC55_1036 PF00534 Glycosyl transferases group 1 FORC55_1036 PF08323 Starch synthase catalytic domain FORC55_1040 PF04993 TfoX N-terminal domain FORC55_1040 PF04994 TfoX C-terminal domain FORC55_1041 PF00356 Bacterial regulatory proteins, lacI family FORC55_1042 PF02613 Nitrate reductase delta subunit FORC55_1043 PF00486 Transcriptional regulatory protein, C terminal FORC55_1043 PF00072 Response regulator receiver domain FORC55_1044 PF02698 DUF218 domain FORC55_1046 PF17193 MukF C-terminal domain FORC55_1046 PF03882 MukF winged-helix domain FORC55_1046 PF17192 MukF middle domain FORC55_1047 PF04288 MukE-like family FORC55_1048 PF04310 MukB N-terminal FORC55_1048 PF16330 MukB hinge domain FORC55_1049 PF00465 Iron-containing alcohol dehydrogenase FORC55_1050 PF12833 Helix-turn-helix domain FORC55_1050 PF06719 AraC-type transcriptional regulator N-terminus FORC55_1052 PF01037 Lrp/AsnC ligand binding domain FORC55_1053 PF01810 LysE type translocator FORC55_1054 PF11842 Domain of unknown function (DUF3362) FORC55_1054 PF08497 Radical SAM N-terminal FORC55_1054 PF04055 Radical SAM superfamily FORC55_1055 PF00589 Phage integrase family FORC55_1055 PF12167 Arm DNA-binding domain FORC55_1075 PF04381 Putative exonuclease, RdgC FORC55_1083 PF00717 Peptidase S24-like FORC55_1094 PF07102 Protein of unknown function (DUF1364) FORC55_1129 PF03707 Bacterial signalling protein N terminal repeat FORC55_1129 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1129 PF00563 EAL domain FORC55_1130 PF05193 Peptidase M16 inactive domain FORC55_1130 PF00675 Insulinase (Peptidase family M16) FORC55_1133 PF03466 LysR substrate binding domain FORC55_1133 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1134 PF01717 Cobalamin-independent synthase, Catalytic domain FORC55_1134 PF08267 Cobalamin-independent synthase, N-terminal domain FORC55_1136 PF03795 YCII-related domain FORC55_1137 PF03061 Thioesterase superfamily FORC55_1138 PF04279 Intracellular septation protein A FORC55_1140 PF02698 DUF218 domain FORC55_1141 PF01370 NAD dependent epimerase/dehydratase family FORC55_1143 PF01226 Formate/nitrite transporter FORC55_1145 PF06796 Periplasmic nitrate reductase protein NapE FORC55_1146 PF03264 NapC/NirT cytochrome c family, N-terminal region FORC55_1147 PF00384 Molybdopterin oxidoreductase FORC55_1147 PF01568 Molydopterin dinucleotide binding domain FORC55_1147 PF18364 Molybdopterin oxidoreductase N-terminal domain FORC55_1150 PF01368 DHH family FORC55_1150 PF02833 DHHA2 domain FORC55_1153 PF00005 ABC transporter FORC55_1154 PF00005 ABC transporter FORC55_1154 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_1155 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_1155 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1156 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1157 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_1158 PF02954 Bacterial regulatory protein, Fis family FORC55_1158 PF00158 Sigma-54 interaction domain FORC55_1159 PF04012 PspA/IM30 family FORC55_1162 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC55_1162 PF00529 HlyD membrane-fusion protein of T1SS FORC55_1163 PF13533 Biotin-lipoyl like FORC55_1164 PF00873 AcrB/AcrD/AcrF family FORC55_1165 PF03352 Methyladenine glycosylase FORC55_1166 PF00582 Universal stress protein family FORC55_1167 PF02080 TrkA-C domain FORC55_1167 PF02254 TrkA-N domain FORC55_1167 PF00999 Sodium/hydrogen exchanger family FORC55_1168 PF01053 Cys/Met metabolism PLP-dependent enzyme FORC55_1169 PF13396 Phospholipase_D-nuclease N-terminal FORC55_1169 PF13091 PLD-like domain FORC55_1170 PF00209 Sodium:neurotransmitter symporter family FORC55_1171 PF00849 RNA pseudouridylate synthase FORC55_1172 PF01066 CDP-alcohol phosphatidyltransferase FORC55_1173 PF00005 ABC transporter FORC55_1174 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1175 PF13416 Bacterial extracellular solute-binding protein FORC55_1177 PF06945 Protein of unknown function (DUF1289) FORC55_1180 PF00005 ABC transporter FORC55_1181 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC55_1182 PF03222 Tryptophan/tyrosine permease family FORC55_1184 PF03448 MgtE intracellular N domain FORC55_1184 PF00571 CBS domain FORC55_1184 PF01769 Divalent cation transporter FORC55_1186 PF08453 Peptidase family M9 N-terminal FORC55_1186 PF04151 Bacterial pre-peptidase C-terminal domain FORC55_1186 PF01752 Collagenase FORC55_1188 PF12793 Sugar transport-related sRNA regulator N-term FORC55_1188 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_1192 PF12729 Four helix bundle sensory module for signal transduction FORC55_1192 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1192 PF00672 HAMP domain FORC55_1195 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1195 PF01590 GAF domain FORC55_1195 PF00563 EAL domain FORC55_1195 PF00360 Phytochrome region FORC55_1196 PF01386 Ribosomal L25p family FORC55_1197 PF11808 Phosphate regulon sensor protein PhoR FORC55_1197 PF00989 PAS fold FORC55_1197 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1197 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1198 PF00072 Response regulator receiver domain FORC55_1198 PF00486 Transcriptional regulatory protein, C terminal FORC55_1200 PF00271 Helicase conserved C-terminal domain FORC55_1200 PF04851 Type III restriction enzyme, res subunit FORC55_1201 PF00849 RNA pseudouridylate synthase FORC55_1201 PF01479 S4 domain FORC55_1202 PF07690 Major Facilitator Superfamily FORC55_1204 PF11066 Protein of unknown function (DUF2867) FORC55_1204 PF13460 NAD(P)H-binding FORC55_1205 PF01554 MatE FORC55_1206 PF00005 ABC transporter FORC55_1209 PF06965 Na+/H+ antiporter 1 FORC55_1210 PF00202 Aminotransferase class-III FORC55_1211 PF03435 Saccharopine dehydrogenase NADP binding domain FORC55_1211 PF16653 Saccharopine dehydrogenase C-terminal domain FORC55_1213 PF00691 OmpA family FORC55_1213 PF05736 OprF membrane domain FORC55_1214 PF02321 Outer membrane efflux protein FORC55_1218 PF03466 LysR substrate binding domain FORC55_1218 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1220 PF01863 Protein of unknown function DUF45 FORC55_1221 PF05971 RNA methyltransferase FORC55_1224 PF04204 Homoserine O-succinyltransferase FORC55_1228 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC55_1231 PF00989 PAS fold FORC55_1231 PF17203 Single cache domain 3 FORC55_1231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1231 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FORC55_1232 PF00072 Response regulator receiver domain FORC55_1234 PF01584 CheW-like domain FORC55_1234 PF00072 Response regulator receiver domain FORC55_1237 PF00072 Response regulator receiver domain FORC55_1237 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1239 PF07690 Major Facilitator Superfamily FORC55_1240 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FORC55_1240 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FORC55_1241 PF00288 GHMP kinases N terminal domain FORC55_1241 PF08544 GHMP kinases C terminal FORC55_1241 PF10509 Galactokinase galactose-binding signature FORC55_1242 PF01263 Aldose 1-epimerase FORC55_1243 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1244 PF00563 EAL domain FORC55_1244 PF17154 Gammaproteobacterial periplasmic sensor domain FORC55_1244 PF00672 HAMP domain FORC55_1244 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1246 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC55_1246 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC55_1246 PF00205 Thiamine pyrophosphate enzyme, central domain FORC55_1247 PF03306 Alpha-acetolactate decarboxylase FORC55_1248 PF03466 LysR substrate binding domain FORC55_1248 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1249 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) FORC55_1250 PF00361 Proton-conducting membrane transporter FORC55_1250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FORC55_1251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1251 PF03466 LysR substrate binding domain FORC55_1252 PF00501 AMP-binding enzyme FORC55_1252 PF13193 AMP-binding enzyme C-terminal domain FORC55_1258 PF00206 Lyase FORC55_1258 PF10415 Fumarase C C-terminus FORC55_1260 PF01654 Cytochrome bd terminal oxidase subunit I FORC55_1261 PF02322 Cytochrome bd terminal oxidase subunit II FORC55_1262 PF02687 FtsX-like permease family FORC55_1262 PF00005 ABC transporter FORC55_1262 PF12704 MacB-like periplasmic core domain FORC55_1263 PF12704 MacB-like periplasmic core domain FORC55_1263 PF02687 FtsX-like permease family FORC55_1263 PF00005 ABC transporter FORC55_1265 PF12704 MacB-like periplasmic core domain FORC55_1265 PF02687 FtsX-like permease family FORC55_1265 PF00005 ABC transporter FORC55_1267 PF00529 HlyD membrane-fusion protein of T1SS FORC55_1268 PF00141 Peroxidase FORC55_1269 PF00232 Glycosyl hydrolase family 1 FORC55_1270 PF00356 Bacterial regulatory proteins, lacI family FORC55_1271 PF01042 Endoribonuclease L-PSP FORC55_1272 PF04074 YhcH/YjgK/YiaL FORC55_1273 PF03009 Glycerophosphoryl diester phosphodiesterase family FORC55_1274 PF00455 DeoR C terminal sensor domain FORC55_1274 PF08220 DeoR-like helix-turn-helix domain FORC55_1275 PF00005 ABC transporter FORC55_1275 PF17912 MalK OB fold domain FORC55_1276 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1277 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1278 PF13416 Bacterial extracellular solute-binding protein FORC55_1280 PF01618 MotA/TolQ/ExbB proton channel family FORC55_1281 PF01618 MotA/TolQ/ExbB proton channel family FORC55_1282 PF02472 Biopolymer transport protein ExbD/TolR FORC55_1283 PF03544 Gram-negative bacterial TonB protein C-terminal FORC55_1285 PF14743 DNA ligase OB-like domain FORC55_1285 PF01068 ATP dependent DNA ligase domain FORC55_1287 PF01554 MatE FORC55_1291 PF00877 NlpC/P60 family FORC55_1292 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1292 PF00672 HAMP domain FORC55_1292 PF12729 Four helix bundle sensory module for signal transduction FORC55_1295 PF00480 ROK family FORC55_1297 PF00994 Probable molybdopterin binding domain FORC55_1297 PF03454 MoeA C-terminal region (domain IV) FORC55_1297 PF03453 MoeA N-terminal region (domain I and II) FORC55_1298 PF12804 MobA-like NTP transferase domain FORC55_1299 PF08402 TOBE domain FORC55_1299 PF00005 ABC transporter FORC55_1300 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1301 PF12849 PBP superfamily domain FORC55_1302 PF02954 Bacterial regulatory protein, Fis family FORC55_1302 PF00158 Sigma-54 interaction domain FORC55_1302 PF00072 Response regulator receiver domain FORC55_1303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1303 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1303 PF00989 PAS fold FORC55_1304 PF00005 ABC transporter FORC55_1304 PF12848 ABC transporter FORC55_1305 PF02634 FdhD/NarQ family FORC55_1309 PF02613 Nitrate reductase delta subunit FORC55_1311 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FORC55_1311 PF00384 Molybdopterin oxidoreductase FORC55_1311 PF01568 Molydopterin dinucleotide binding domain FORC55_1312 PF13247 4Fe-4S dicluster domain FORC55_1315 PF02146 Sir2 family FORC55_1316 PF04461 Protein of unknown function (DUF520) FORC55_1317 PF00793 DAHP synthetase I family FORC55_1320 PF17783 CvfB-like winged helix domain FORC55_1320 PF13509 S1 domain FORC55_1321 PF01189 16S rRNA methyltransferase RsmB/F FORC55_1321 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FORC55_1321 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FORC55_1322 PF02470 MlaD protein FORC55_1323 PF04403 Paraquat-inducible protein A FORC55_1324 PF00664 ABC transporter transmembrane region FORC55_1324 PF00005 ABC transporter FORC55_1325 PF13185 GAF domain FORC55_1326 PF04352 ProQ/FINO family FORC55_1326 PF17516 ProQ C-terminal domain FORC55_1327 PF17804 Tail specific protease N-terminal domain FORC55_1327 PF03572 Peptidase family S41 FORC55_1327 PF00595 PDZ domain FORC55_1327 PF11818 C-terminal domain of tail specific protease (DUF3340) FORC55_1329 PF01433 Peptidase family M1 domain FORC55_1329 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FORC55_1329 PF11940 Domain of unknown function (DUF3458) Ig-like fold FORC55_1330 PF05088 Bacterial NAD-glutamate dehydrogenase FORC55_1331 PF01180 Dihydroorotate dehydrogenase FORC55_1332 PF07126 Cell-division protein ZapC FORC55_1333 PF01170 Putative RNA methylase family UPF0020 FORC55_1333 PF02926 THUMP domain FORC55_1333 PF10672 S-adenosylmethionine-dependent methyltransferase FORC55_1337 PF07977 FabA-like domain FORC55_1338 PF13654 AAA domain FORC55_1338 PF05362 Lon protease (S16) C-terminal proteolytic domain FORC55_1339 PF17414 MatP C-terminal ribbon-helix-helix domain FORC55_1339 PF06303 MatP N-terminal domain FORC55_1352 PF11647 Membrane Localization Domain FORC55_1352 PF11713 Peptidase C80 family FORC55_1352 PF07634 RtxA repeat FORC55_1352 PF16671 Actin cross-linking domain FORC55_1352 PF12146 Serine aminopeptidase, S33 FORC55_1353 PF02794 RTX toxin acyltransferase family FORC55_1355 PF13737 Transposase DDE domain FORC55_1357 PF00005 ABC transporter FORC55_1357 PF03412 Peptidase C39 family FORC55_1357 PF00664 ABC transporter transmembrane region FORC55_1358 PF00005 ABC transporter FORC55_1358 PF00664 ABC transporter transmembrane region FORC55_1358 PF03412 Peptidase C39 family FORC55_1360 PF00664 ABC transporter transmembrane region FORC55_1360 PF00005 ABC transporter FORC55_1360 PF03412 Peptidase C39 family FORC55_1361 PF00072 Response regulator receiver domain FORC55_1361 PF09308 LuxQ, periplasmic FORC55_1361 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1364 PF00115 Cytochrome C and Quinol oxidase polypeptide I FORC55_1367 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FORC55_1367 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FORC55_1369 PF00403 Heavy-metal-associated domain FORC55_1372 PF00027 Cyclic nucleotide-binding domain FORC55_1372 PF13545 Crp-like helix-turn-helix domain FORC55_1373 PF00582 Universal stress protein family FORC55_1374 PF01171 PP-loop family FORC55_1378 PF08402 TOBE domain FORC55_1378 PF00005 ABC transporter FORC55_1379 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1380 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1381 PF13416 Bacterial extracellular solute-binding protein FORC55_1382 PF13416 Bacterial extracellular solute-binding protein FORC55_1385 PF01235 Sodium:alanine symporter family FORC55_1386 PF01810 LysE type translocator FORC55_1391 PF13737 Transposase DDE domain FORC55_1394 PF04717 Type VI secretion system, phage-baseplate injector FORC55_1394 PF16671 Actin cross-linking domain FORC55_1395 PF05638 Type VI secretion system effector, Hcp FORC55_1396 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FORC55_1397 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1397 PF00672 HAMP domain FORC55_1397 PF02743 Cache domain FORC55_1398 PF07690 Major Facilitator Superfamily FORC55_1399 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC55_1399 PF00529 HlyD membrane-fusion protein of T1SS FORC55_1400 PF02321 Outer membrane efflux protein FORC55_1402 PF00270 DEAD/DEAH box helicase FORC55_1402 PF00271 Helicase conserved C-terminal domain FORC55_1403 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1403 PF08447 PAS fold FORC55_1403 PF13426 PAS domain FORC55_1404 PF02203 Tar ligand binding domain homologue FORC55_1404 PF00672 HAMP domain FORC55_1404 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1405 PF00893 Small Multidrug Resistance protein FORC55_1406 PF00875 DNA photolyase FORC55_1406 PF03441 FAD binding domain of DNA photolyase FORC55_1407 PF07690 Major Facilitator Superfamily FORC55_1408 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1408 PF03466 LysR substrate binding domain FORC55_1410 PF01979 Amidohydrolase family FORC55_1411 PF03099 Biotin/lipoate A/B protein ligase family FORC55_1411 PF10437 Bacterial lipoate protein ligase C-terminus FORC55_1412 PF00012 Hsp70 protein FORC55_1414 PF11898 Domain of unknown function (DUF3418) FORC55_1414 PF00271 Helicase conserved C-terminal domain FORC55_1414 PF00270 DEAD/DEAH box helicase FORC55_1414 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FORC55_1414 PF04408 Helicase associated domain (HA2) FORC55_1418 PF03707 Bacterial signalling protein N terminal repeat FORC55_1418 PF00563 EAL domain FORC55_1418 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1420 PF00012 Hsp70 protein FORC55_1421 PF00012 Hsp70 protein FORC55_1422 PF17158 Membrane-associated sensor, integral membrane domain FORC55_1422 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1424 PF00563 EAL domain FORC55_1424 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1424 PF03707 Bacterial signalling protein N terminal repeat FORC55_1428 PF06508 Queuosine biosynthesis protein QueC FORC55_1429 PF04055 Radical SAM superfamily FORC55_1432 PF10414 Sirohaem synthase dimerisation region FORC55_1432 PF14824 Sirohaem biosynthesis protein central FORC55_1432 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC55_1433 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_1434 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1435 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1436 PF00005 ABC transporter FORC55_1437 PF01027 Inhibitor of apoptosis-promoting Bax1 FORC55_1438 PF04358 DsrC like protein FORC55_1439 PF00708 Acylphosphatase FORC55_1440 PF10672 S-adenosylmethionine-dependent methyltransferase FORC55_1440 PF17785 PUA-like domain FORC55_1441 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1443 PF00462 Glutaredoxin FORC55_1443 PF08534 Redoxin FORC55_1444 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC55_1444 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1444 PF00072 Response regulator receiver domain FORC55_1444 PF00672 HAMP domain FORC55_1444 PF01627 Hpt domain FORC55_1448 PF00072 Response regulator receiver domain FORC55_1449 PF02798 Glutathione S-transferase, N-terminal domain FORC55_1449 PF14497 Glutathione S-transferase, C-terminal domain FORC55_1451 PF04209 homogentisate 1,2-dioxygenase FORC55_1452 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC55_1453 PF07687 Peptidase dimerisation domain FORC55_1453 PF01546 Peptidase family M20/M25/M40 FORC55_1456 PF16177 Acetyl-coenzyme A synthetase N-terminus FORC55_1456 PF00501 AMP-binding enzyme FORC55_1456 PF13193 AMP-binding enzyme C-terminal domain FORC55_1457 PF04303 PrpF protein FORC55_1458 PF00330 Aconitase family (aconitate hydratase) FORC55_1458 PF00694 Aconitase C-terminal domain FORC55_1459 PF00285 Citrate synthase, C-terminal domain FORC55_1461 PF00392 Bacterial regulatory proteins, gntR family FORC55_1461 PF07729 FCD domain FORC55_1465 PF01970 Tripartite tricarboxylate transporter TctA family FORC55_1468 PF02653 Branched-chain amino acid transport system / permease component FORC55_1469 PF00005 ABC transporter FORC55_1470 PF13407 Periplasmic binding protein domain FORC55_1474 PF00072 Response regulator receiver domain FORC55_1474 PF00486 Transcriptional regulatory protein, C terminal FORC55_1475 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1475 PF00672 HAMP domain FORC55_1475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1476 PF06629 MltA-interacting protein MipA FORC55_1477 PF04393 Protein of unknown function (DUF535) FORC55_1478 PF02954 Bacterial regulatory protein, Fis family FORC55_1478 PF00072 Response regulator receiver domain FORC55_1478 PF00158 Sigma-54 interaction domain FORC55_1479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1480 PF00939 Sodium:sulfate symporter transmembrane region FORC55_1481 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1481 PF00672 HAMP domain FORC55_1482 PF00842 Alanine racemase, C-terminal domain FORC55_1482 PF01168 Alanine racemase, N-terminal domain FORC55_1483 PF00892 EamA-like transporter family FORC55_1485 PF13302 Acetyltransferase (GNAT) domain FORC55_1486 PF18024 Helix-turn-helix domain FORC55_1486 PF00158 Sigma-54 interaction domain FORC55_1487 PF05128 Domain of unknown function (DUF697) FORC55_1488 PF04317 YcjX-like family, DUF463 FORC55_1491 PF04715 Anthranilate synthase component I, N terminal region FORC55_1491 PF00425 chorismate binding enzyme FORC55_1492 PF00293 NUDIX domain FORC55_1493 PF03222 Tryptophan/tyrosine permease family FORC55_1494 PF03315 Serine dehydratase beta chain FORC55_1494 PF03313 Serine dehydratase alpha chain FORC55_1495 PF01242 6-pyruvoyl tetrahydropterin synthase FORC55_1496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1496 PF00672 HAMP domain FORC55_1496 PF12729 Four helix bundle sensory module for signal transduction FORC55_1497 PF00152 tRNA synthetases class II (D, K and N) FORC55_1497 PF01336 OB-fold nucleic acid binding domain FORC55_1498 PF08543 Phosphomethylpyrimidine kinase FORC55_1499 PF00155 Aminotransferase class I and II FORC55_1502 PF02743 Cache domain FORC55_1502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1502 PF00672 HAMP domain FORC55_1503 PF04349 Periplasmic glucan biosynthesis protein, MdoG FORC55_1504 PF13506 Glycosyl transferase family 21 FORC55_1505 PF00356 Bacterial regulatory proteins, lacI family FORC55_1506 PF04794 YdjC-like protein FORC55_1507 PF11975 Family 4 glycosyl hydrolase C-terminal domain FORC55_1507 PF02056 Family 4 glycosyl hydrolase FORC55_1508 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FORC55_1509 PF02378 Phosphotransferase system, EIIC FORC55_1510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC55_1511 PF01522 Polysaccharide deacetylase FORC55_1512 PF01522 Polysaccharide deacetylase FORC55_1513 PF02028 BCCT, betaine/carnitine/choline family transporter FORC55_1514 PF01047 MarR family FORC55_1515 PF00196 Bacterial regulatory proteins, luxR family FORC55_1515 PF00072 Response regulator receiver domain FORC55_1516 PF17200 Single Cache domain 2 FORC55_1516 PF07730 Histidine kinase FORC55_1517 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC55_1519 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC55_1522 PF00753 Metallo-beta-lactamase superfamily FORC55_1523 PF05951 Bacterial protein of unknown function (DUF882) FORC55_1529 PF13006 Insertion element 4 transposase N-terminal FORC55_1529 PF01609 Transposase DDE domain FORC55_1530 PF00925 GTP cyclohydrolase II FORC55_1532 PF07690 Major Facilitator Superfamily FORC55_1535 PF00521 DNA gyrase/topoisomerase IV, subunit A FORC55_1535 PF03989 DNA gyrase C-terminal domain, beta-propeller FORC55_1537 PF00317 Ribonucleotide reductase, all-alpha domain FORC55_1537 PF03477 ATP cone domain FORC55_1537 PF02867 Ribonucleotide reductase, barrel domain FORC55_1538 PF00268 Ribonucleotide reductase, small chain FORC55_1539 PF00175 Oxidoreductase NAD-binding domain FORC55_1539 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_1539 PF00970 Oxidoreductase FAD-binding domain FORC55_1541 PF00994 Probable molybdopterin binding domain FORC55_1544 PF00672 HAMP domain FORC55_1544 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_1544 PF17200 Single Cache domain 2 FORC55_1547 PF00005 ABC transporter FORC55_1548 PF01032 FecCD transport family FORC55_1549 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FORC55_1551 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FORC55_1552 PF02654 Cobalamin-5-phosphate synthase FORC55_1553 PF02277 Phosphoribosyltransferase FORC55_1554 PF01641 SelR domain FORC55_1556 PF08411 Exonuclease C-terminal FORC55_1556 PF00929 Exonuclease FORC55_1557 PF03788 LrgA family FORC55_1558 PF04172 LrgB-like family FORC55_1559 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FORC55_1559 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FORC55_1561 PF02222 ATP-grasp domain FORC55_1562 PF05724 Thiopurine S-methyltransferase (TPMT) FORC55_1564 PF00216 Bacterial DNA-binding protein FORC55_1565 PF03483 B3/4 domain FORC55_1565 PF01588 Putative tRNA binding domain FORC55_1565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FORC55_1565 PF03484 tRNA synthetase B5 domain FORC55_1565 PF03147 Ferredoxin-fold anticodon binding domain FORC55_1566 PF01409 tRNA synthetases class II core domain (F) FORC55_1566 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FORC55_1568 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1568 PF00072 Response regulator receiver domain FORC55_1569 PF01066 CDP-alcohol phosphatidyltransferase FORC55_1570 PF08459 UvrC Helix-hairpin-helix N-terminal FORC55_1570 PF02151 UvrB/uvrC motif FORC55_1570 PF01541 GIY-YIG catalytic domain FORC55_1571 PF00196 Bacterial regulatory proteins, luxR family FORC55_1571 PF00072 Response regulator receiver domain FORC55_1572 PF03104 DNA polymerase family B, exonuclease domain FORC55_1572 PF00136 DNA polymerase family B FORC55_1573 PF00563 EAL domain FORC55_1573 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1573 PF13426 PAS domain FORC55_1575 PF01132 Elongation factor P (EF-P) OB domain FORC55_1575 PF09285 Elongation factor P, C-terminal FORC55_1575 PF08207 Elongation factor P (EF-P) KOW-like domain FORC55_1576 PF04269 Protein of unknown function, DUF440 FORC55_1578 PF07702 UTRA domain FORC55_1578 PF00392 Bacterial regulatory proteins, gntR family FORC55_1579 PF01979 Amidohydrolase family FORC55_1580 PF00491 Arginase family FORC55_1581 PF17392 Urocanase C-terminal domain FORC55_1581 PF17391 Urocanase N-terminal domain FORC55_1581 PF01175 Urocanase Rossmann-like domain FORC55_1582 PF00221 Aromatic amino acid lyase FORC55_1585 PF00089 Trypsin FORC55_1586 PF04191 Phospholipid methyltransferase FORC55_1587 PF13183 4Fe-4S dicluster domain FORC55_1587 PF01565 FAD binding domain FORC55_1587 PF02913 FAD linked oxidases, C-terminal domain FORC55_1591 PF13488 Glycine zipper FORC55_1591 PF00691 OmpA family FORC55_1595 PF01259 SAICAR synthetase FORC55_1597 PF00390 Malic enzyme, N-terminal domain FORC55_1597 PF03949 Malic enzyme, NAD binding domain FORC55_1599 PF02698 DUF218 domain FORC55_1600 PF08448 PAS fold FORC55_1600 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1601 PF00266 Aminotransferase class-V FORC55_1603 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_1604 PF00664 ABC transporter transmembrane region FORC55_1604 PF00005 ABC transporter FORC55_1605 PF00005 ABC transporter FORC55_1605 PF00664 ABC transporter transmembrane region FORC55_1606 PF00849 RNA pseudouridylate synthase FORC55_1606 PF01479 S4 domain FORC55_1607 PF01300 Telomere recombination FORC55_1608 PF02811 PHP domain FORC55_1609 PF00425 chorismate binding enzyme FORC55_1609 PF04715 Anthranilate synthase component I, N terminal region FORC55_1610 PF00117 Glutamine amidotransferase class-I FORC55_1611 PF02885 Glycosyl transferase family, helical bundle domain FORC55_1611 PF00591 Glycosyl transferase family, a/b domain FORC55_1612 PF00218 Indole-3-glycerol phosphate synthase FORC55_1612 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FORC55_1613 PF00291 Pyridoxal-phosphate dependent enzyme FORC55_1614 PF00290 Tryptophan synthase alpha chain FORC55_1615 PF00375 Sodium:dicarboxylate symporter family FORC55_1616 PF00265 Thymidine kinase FORC55_1617 PF02938 GAD domain FORC55_1617 PF00152 tRNA synthetases class II (D, K and N) FORC55_1617 PF01336 OB-fold nucleic acid binding domain FORC55_1618 PF01904 Protein of unknown function DUF72 FORC55_1619 PF13649 Methyltransferase domain FORC55_1620 PF08003 Protein of unknown function (DUF1698) FORC55_1621 PF18030 RimK PreATP-grasp domain FORC55_1621 PF08443 RimK-like ATP-grasp domain FORC55_1624 PF00266 Aminotransferase class-V FORC55_1626 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1626 PF00989 PAS fold FORC55_1626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1629 PF04993 TfoX N-terminal domain FORC55_1629 PF04994 TfoX C-terminal domain FORC55_1631 PF03956 Lysine exporter LysO FORC55_1633 PF00282 Pyridoxal-dependent decarboxylase conserved domain FORC55_1634 PF01418 Helix-turn-helix domain, rpiR family FORC55_1634 PF01380 SIS domain FORC55_1635 PF00465 Iron-containing alcohol dehydrogenase FORC55_1635 PF00171 Aldehyde dehydrogenase family FORC55_1636 PF00462 Glutaredoxin FORC55_1637 PF13006 Insertion element 4 transposase N-terminal FORC55_1637 PF01609 Transposase DDE domain FORC55_1638 PF02080 TrkA-C domain FORC55_1638 PF06826 Predicted Permease Membrane Region FORC55_1639 PF10431 C-terminal, D2-small domain, of ClpB protein FORC55_1639 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_1639 PF07724 AAA domain (Cdc48 subfamily) FORC55_1639 PF17871 AAA lid domain FORC55_1639 PF02861 Clp amino terminal domain, pathogenicity island component FORC55_1640 PF02617 ATP-dependent Clp protease adaptor protein ClpS FORC55_1641 PF00313 'Cold-shock' DNA-binding domain FORC55_1642 PF01609 Transposase DDE domain FORC55_1642 PF13006 Insertion element 4 transposase N-terminal FORC55_1643 PF03971 Monomeric isocitrate dehydrogenase FORC55_1644 PF00849 RNA pseudouridylate synthase FORC55_1645 PF01502 Phosphoribosyl-AMP cyclohydrolase FORC55_1645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FORC55_1646 PF00977 Histidine biosynthesis protein FORC55_1647 PF00977 Histidine biosynthesis protein FORC55_1648 PF00117 Glutamine amidotransferase class-I FORC55_1649 PF08645 Polynucleotide kinase 3 phosphatase FORC55_1649 PF00475 Imidazoleglycerol-phosphate dehydratase FORC55_1650 PF00155 Aminotransferase class I and II FORC55_1651 PF00815 Histidinol dehydrogenase FORC55_1652 PF08029 HisG, C-terminal domain FORC55_1652 PF01634 ATP phosphoribosyltransferase FORC55_1653 PF03553 Na+/H+ antiporter family FORC55_1654 PF00816 H-NS histone family FORC55_1655 PF00294 pfkB family carbohydrate kinase FORC55_1657 PF04356 Protein of unknown function (DUF489) FORC55_1658 PF00206 Lyase FORC55_1658 PF08328 Adenylosuccinate lyase C-terminal FORC55_1660 PF16036 Chalcone isomerase-like FORC55_1665 PF00106 short chain dehydrogenase FORC55_1667 PF01435 Peptidase family M48 FORC55_1670 PF08241 Methyltransferase domain FORC55_1671 PF00155 Aminotransferase class I and II FORC55_1672 PF04055 Radical SAM superfamily FORC55_1672 PF06968 Biotin and Thiamin Synthesis associated domain FORC55_1673 PF00202 Aminotransferase class-III FORC55_1674 PF02403 Seryl-tRNA synthetase N-terminal domain FORC55_1674 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FORC55_1675 PF12002 MgsA AAA+ ATPase C terminal FORC55_1675 PF16193 AAA C-terminal domain FORC55_1675 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_1676 PF03548 Outer membrane lipoprotein carrier protein LolA FORC55_1677 PF02810 SEC-C motif FORC55_1677 PF07516 SecA Wing and Scaffold domain FORC55_1677 PF01043 SecA preprotein cross-linking domain FORC55_1677 PF07517 SecA DEAD-like domain FORC55_1678 PF01207 Dihydrouridine synthase (Dus) FORC55_1679 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1680 PF00005 ABC transporter FORC55_1681 PF02653 Branched-chain amino acid transport system / permease component FORC55_1683 PF09905 DNA-binding protein VF530 FORC55_1684 PF04217 Protein of unknown function, DUF412 FORC55_1685 PF00871 Acetokinase family FORC55_1686 PF07085 DRTGG domain FORC55_1686 PF01515 Phosphate acetyl/butaryl transferase FORC55_1687 PF13409 Glutathione S-transferase, N-terminal domain FORC55_1688 PF00005 ABC transporter FORC55_1688 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_1689 PF00005 ABC transporter FORC55_1689 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_1690 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1690 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_1691 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1692 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_1694 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1694 PF13188 PAS domain FORC55_1694 PF08448 PAS fold FORC55_1694 PF00072 Response regulator receiver domain FORC55_1695 PF00158 Sigma-54 interaction domain FORC55_1695 PF00072 Response regulator receiver domain FORC55_1695 PF02954 Bacterial regulatory protein, Fis family FORC55_1696 PF00563 EAL domain FORC55_1696 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1696 PF03707 Bacterial signalling protein N terminal repeat FORC55_1696 PF13188 PAS domain FORC55_1697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1697 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1698 PF13426 PAS domain FORC55_1698 PF13188 PAS domain FORC55_1698 PF00989 PAS fold FORC55_1698 PF00512 His Kinase A (phospho-acceptor) domain FORC55_1698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1700 PF00072 Response regulator receiver domain FORC55_1703 PF01300 Telomere recombination FORC55_1703 PF03481 Putative GTP-binding controlling metal-binding FORC55_1706 PF01161 Phosphatidylethanolamine-binding protein FORC55_1708 PF00704 Glycosyl hydrolases family 18 FORC55_1708 PF06483 Chitinase C FORC55_1709 PF00704 Glycosyl hydrolases family 18 FORC55_1709 PF06483 Chitinase C FORC55_1712 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC55_1712 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC55_1713 PF01022 Bacterial regulatory protein, arsR family FORC55_1714 PF08448 PAS fold FORC55_1714 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1716 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FORC55_1719 PF01037 Lrp/AsnC ligand binding domain FORC55_1719 PF13404 AsnC-type helix-turn-helix domain FORC55_1720 PF00291 Pyridoxal-phosphate dependent enzyme FORC55_1721 PF01343 Peptidase family S49 FORC55_1721 PF08496 Peptidase family S49 N-terminal FORC55_1722 PF00106 short chain dehydrogenase FORC55_1724 PF03692 Putative zinc- or iron-chelating domain FORC55_1725 PF03692 Putative zinc- or iron-chelating domain FORC55_1726 PF13662 Toprim domain FORC55_1726 PF02132 RecR protein FORC55_1727 PF02575 YbaB/EbfC DNA-binding family FORC55_1728 PF12169 DNA polymerase III subunits gamma and tau domain III FORC55_1728 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FORC55_1728 PF12170 DNA polymerase III tau subunit V interacting with alpha FORC55_1729 PF00156 Phosphoribosyl transferase domain FORC55_1731 PF00072 Response regulator receiver domain FORC55_1732 PF03466 LysR substrate binding domain FORC55_1732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1733 PF00881 Nitroreductase family FORC55_1734 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FORC55_1734 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FORC55_1734 PF00378 Enoyl-CoA hydratase/isomerase FORC55_1735 PF00108 Thiolase, N-terminal domain FORC55_1735 PF02803 Thiolase, C-terminal domain FORC55_1736 PF08281 Sigma-70, region 4 FORC55_1736 PF04542 Sigma-70 region 2 FORC55_1738 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC55_1739 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC55_1740 PF01451 Low molecular weight phosphotyrosine protein phosphatase FORC55_1741 PF12557 Cob(I)alamin adenosyltransferase N terminal FORC55_1741 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FORC55_1742 PF05170 AsmA family FORC55_1743 PF00485 Phosphoribulokinase / Uridine kinase family FORC55_1745 PF10609 NUBPL iron-transfer P-loop NTPase FORC55_1746 PF01588 Putative tRNA binding domain FORC55_1746 PF09334 tRNA synthetases class I (M) FORC55_1748 PF01048 Phosphorylase superfamily FORC55_1749 PF00403 Heavy-metal-associated domain FORC55_1750 PF07085 DRTGG domain FORC55_1750 PF03061 Thioesterase superfamily FORC55_1750 PF00571 CBS domain FORC55_1750 PF00392 Bacterial regulatory proteins, gntR family FORC55_1751 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1752 PF02391 MoaE protein FORC55_1753 PF02597 ThiS family FORC55_1754 PF01967 MoaC family FORC55_1755 PF00994 Probable molybdopterin binding domain FORC55_1756 PF04055 Radical SAM superfamily FORC55_1756 PF06463 Molybdenum Cofactor Synthesis C FORC55_1757 PF01933 Uncharacterised protein family UPF0052 FORC55_1758 PF01627 Hpt domain FORC55_1759 PF00158 Sigma-54 interaction domain FORC55_1759 PF00072 Response regulator receiver domain FORC55_1759 PF02954 Bacterial regulatory protein, Fis family FORC55_1760 PF02151 UvrB/uvrC motif FORC55_1760 PF00271 Helicase conserved C-terminal domain FORC55_1760 PF04851 Type III restriction enzyme, res subunit FORC55_1760 PF17757 UvrB interaction domain FORC55_1760 PF12344 Ultra-violet resistance protein B FORC55_1761 PF02508 Rnf-Nqr subunit, membrane protein FORC55_1762 PF04060 Putative Fe-S cluster FORC55_1763 PF10531 SLBB domain FORC55_1763 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FORC55_1763 PF12838 4Fe-4S dicluster domain FORC55_1763 PF13375 RnfC Barrel sandwich hybrid domain FORC55_1764 PF03116 NQR2, RnfD, RnfE family FORC55_1765 PF04205 FMN-binding domain FORC55_1766 PF02508 Rnf-Nqr subunit, membrane protein FORC55_1767 PF00633 Helix-hairpin-helix motif FORC55_1767 PF10576 Iron-sulfur binding domain of endonuclease III FORC55_1767 PF00730 HhH-GPD superfamily base excision DNA repair protein FORC55_1768 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC55_1769 PF10952 Protein of unknown function (DUF2753) FORC55_1770 PF18393 MotY N-terminal domain FORC55_1770 PF00691 OmpA family FORC55_1771 PF00929 Exonuclease FORC55_1772 PF03553 Na+/H+ antiporter family FORC55_1772 PF13726 Na+-H+ antiporter family FORC55_1773 PF00156 Phosphoribosyl transferase domain FORC55_1774 PF02674 Colicin V production protein FORC55_1775 PF05036 Sporulation related domain FORC55_1776 PF08245 Mur ligase middle domain FORC55_1776 PF02875 Mur ligase family, glutamate ligase domain FORC55_1777 PF01039 Carboxyl transferase domain FORC55_1777 PF17848 Acetyl-coA carboxylase zinc finger domain FORC55_1778 PF01416 tRNA pseudouridine synthase FORC55_1781 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FORC55_1781 PF00749 tRNA synthetases class I (E and Q), catalytic domain FORC55_1782 PF00367 phosphotransferase system, EIIB FORC55_1782 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FORC55_1782 PF02378 Phosphotransferase system, EIIC FORC55_1783 PF01979 Amidohydrolase family FORC55_1784 PF00480 ROK family FORC55_1784 PF01047 MarR family FORC55_1785 PF00999 Sodium/hydrogen exchanger family FORC55_1785 PF02254 TrkA-N domain FORC55_1786 PF00733 Asparagine synthase FORC55_1786 PF13537 Glutamine amidotransferase domain FORC55_1787 PF02357 Transcription termination factor nusG FORC55_1788 PF00854 POT family FORC55_1789 PF00762 Ferrochelatase FORC55_1790 PF05191 Adenylate kinase, active site lid FORC55_1791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1791 PF00183 Hsp90 protein FORC55_1792 PF00486 Transcriptional regulatory protein, C terminal FORC55_1793 PF17323 Trans-membrane regulatory protein ToxS FORC55_1795 PF12850 Calcineurin-like phosphoesterase superfamily domain FORC55_1796 PF01370 NAD dependent epimerase/dehydratase family FORC55_1796 PF08338 Domain of unknown function (DUF1731) FORC55_1797 PF00106 short chain dehydrogenase FORC55_1798 PF00085 Thioredoxin FORC55_1799 PF01145 SPFH domain / Band 7 family FORC55_1799 PF16200 C-terminal region of band_7 FORC55_1800 PF01957 NfeD-like C-terminal, partner-binding FORC55_1801 PF13411 MerR HTH family regulatory protein FORC55_1802 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FORC55_1804 PF01653 NAD-dependent DNA ligase adenylation domain FORC55_1804 PF03120 NAD-dependent DNA ligase OB-fold domain FORC55_1804 PF12826 Helix-hairpin-helix motif FORC55_1804 PF00533 BRCA1 C Terminus (BRCT) domain FORC55_1804 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FORC55_1805 PF04354 ZipA, C-terminal FtsZ-binding domain FORC55_1807 PF00291 Pyridoxal-phosphate dependent enzyme FORC55_1808 PF00381 PTS HPr component phosphorylation site FORC55_1809 PF00391 PEP-utilising enzyme, mobile domain FORC55_1809 PF02896 PEP-utilising enzyme, TIM barrel domain FORC55_1809 PF05524 PEP-utilising enzyme, N-terminal FORC55_1810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FORC55_1811 PF01494 FAD binding domain FORC55_1812 PF01938 TRAM domain FORC55_1812 PF00919 Uncharacterized protein family UPF0004 FORC55_1812 PF04055 Radical SAM superfamily FORC55_1813 PF02562 PhoH-like protein FORC55_1814 PF02130 Uncharacterized protein family UPF0054 FORC55_1815 PF00571 CBS domain FORC55_1815 PF03471 Transporter associated domain FORC55_1816 PF00795 Carbon-nitrogen hydrolase FORC55_1817 PF07295 Zinc-ribbon containing domain FORC55_1818 PF00133 tRNA synthetases class I (I, L, M and V) FORC55_1818 PF13603 Leucyl-tRNA synthetase, Domain 2 FORC55_1818 PF08264 Anticodon-binding domain of tRNA FORC55_1819 PF04390 Lipopolysaccharide-assembly FORC55_1820 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FORC55_1820 PF06144 DNA polymerase III, delta subunit FORC55_1822 PF02590 Predicted SPOUT methyltransferase FORC55_1823 PF03717 Penicillin-binding Protein dimerisation domain FORC55_1823 PF00905 Penicillin binding protein transpeptidase domain FORC55_1824 PF01098 Cell cycle protein FORC55_1825 PF05036 Sporulation related domain FORC55_1825 PF03330 Lytic transglycolase FORC55_1826 PF07943 Penicillin-binding protein 5, C-terminal domain FORC55_1826 PF00768 D-alanyl-D-alanine carboxypeptidase FORC55_1827 PF04359 Protein of unknown function (DUF493) FORC55_1828 PF03099 Biotin/lipoate A/B protein ligase family FORC55_1829 PF04055 Radical SAM superfamily FORC55_1829 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FORC55_1831 PF00464 Serine hydroxymethyltransferase FORC55_1835 PF02706 Chain length determinant protein FORC55_1835 PF13807 G-rich domain on putative tyrosine kinase FORC55_1835 PF13614 AAA domain FORC55_1836 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FORC55_1836 PF10531 SLBB domain FORC55_1836 PF02563 Polysaccharide biosynthesis/export protein FORC55_1838 PF02397 Bacterial sugar transferase FORC55_1842 PF17945 Beta/Gamma crystallin FORC55_1842 PF12561 ToxR activated gene A lipoprotein domain FORC55_1845 PF03808 Glycosyl transferase WecB/TagA/CpsF family FORC55_1847 PF00862 Sucrose synthase FORC55_1847 PF00534 Glycosyl transferases group 1 FORC55_1849 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_1853 PF06426 Serine acetyltransferase, N-terminal FORC55_1853 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_1854 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FORC55_1854 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FORC55_1854 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FORC55_1855 PF02350 UDP-N-acetylglucosamine 2-epimerase FORC55_1856 PF01451 Low molecular weight phosphotyrosine protein phosphatase FORC55_1857 PF00873 AcrB/AcrD/AcrF family FORC55_1858 PF13533 Biotin-lipoyl like FORC55_1859 PF16657 Maltogenic Amylase, C-terminal domain FORC55_1859 PF00128 Alpha amylase, catalytic domain FORC55_1860 PF00367 phosphotransferase system, EIIB FORC55_1860 PF02378 Phosphotransferase system, EIIC FORC55_1861 PF00356 Bacterial regulatory proteins, lacI family FORC55_1863 PF09383 NIL domain FORC55_1863 PF00005 ABC transporter FORC55_1864 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_1865 PF03180 NLPA lipoprotein FORC55_1866 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FORC55_1867 PF07348 Syd protein (SUKH-2) FORC55_1868 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FORC55_1868 PF14489 QueF-like protein FORC55_1870 PF00990 Diguanylate cyclase, GGDEF domain FORC55_1871 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FORC55_1871 PF03641 Possible lysine decarboxylase FORC55_1871 PF11892 Domain of unknown function (DUF3412) FORC55_1872 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FORC55_1872 PF01367 5'-3' exonuclease, C-terminal SAM fold FORC55_1873 PF04241 Protein of unknown function (DUF423) FORC55_1874 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1874 PF03466 LysR substrate binding domain FORC55_1875 PF02926 THUMP domain FORC55_1875 PF02568 Thiamine biosynthesis protein (ThiI) FORC55_1876 PF00691 OmpA family FORC55_1876 PF13677 Membrane MotB of proton-channel complex MotA/MotB FORC55_1877 PF01618 MotA/TolQ/ExbB proton channel family FORC55_1878 PF02609 Exonuclease VII small subunit FORC55_1879 PF00348 Polyprenyl synthetase FORC55_1880 PF02780 Transketolase, C-terminal domain FORC55_1880 PF02779 Transketolase, pyrimidine binding domain FORC55_1880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FORC55_1881 PF00849 RNA pseudouridylate synthase FORC55_1882 PF04287 tRNA pseudouridine synthase C FORC55_1886 PF13302 Acetyltransferase (GNAT) domain FORC55_1888 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FORC55_1889 PF03806 AbgT putative transporter family FORC55_1890 PF00444 Ribosomal protein L36 FORC55_1891 PF01197 Ribosomal protein L31 FORC55_1892 PF01980 tRNA-methyltransferase O FORC55_1892 PF18389 TrmO C-terminal domain FORC55_1893 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FORC55_1893 PF03129 Anticodon binding domain FORC55_1893 PF04073 Aminoacyl-tRNA editing domain FORC55_1895 PF06786 Uncharacterised protein family (UPF0253) FORC55_1897 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FORC55_1897 PF02769 AIR synthase related protein, C-terminal domain FORC55_1897 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FORC55_1899 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_1899 PF01464 Transglycosylase SLT domain FORC55_1900 PF14437 MafB19-like deaminase FORC55_1901 PF03806 AbgT putative transporter family FORC55_1906 PF00114 Pilin (bacterial filament) FORC55_1906 PF07963 Prokaryotic N-terminal methylation motif FORC55_1907 PF00226 DnaJ domain FORC55_1907 PF00684 DnaJ central domain FORC55_1907 PF01556 DnaJ C terminal domain FORC55_1908 PF00012 Hsp70 protein FORC55_1909 PF01025 GrpE FORC55_1910 PF01513 ATP-NAD kinase FORC55_1911 PF02463 RecF/RecN/SMC N terminal domain FORC55_1912 PF04355 SmpA / OmlA family FORC55_1913 PF03658 RnfH family Ubiquitin FORC55_1914 PF03364 Polyketide cyclase / dehydrase and lipid transport FORC55_1915 PF01668 SmpB protein FORC55_1916 PF00589 Phage integrase family FORC55_1916 PF13356 Arm DNA-binding domain FORC55_1919 PF09615 CRISPR-associated protein (Cas_Csy3) FORC55_1920 PF09614 CRISPR-associated protein (Cas_Csy2) FORC55_1921 PF09611 CRISPR-associated protein (Cas_Csy1) FORC55_1922 PF18019 HD domain FORC55_1923 PF01867 CRISPR associated protein Cas1 FORC55_1925 PF05638 Type VI secretion system effector, Hcp FORC55_1926 PF16671 Actin cross-linking domain FORC55_1926 PF04717 Type VI secretion system, phage-baseplate injector FORC55_1931 PF03050 Transposase IS66 family FORC55_1931 PF13817 IS66 C-terminal element FORC55_1931 PF13007 Transposase C of IS166 homeodomain FORC55_1931 PF13005 zinc-finger binding domain of transposase IS66 FORC55_1939 PF04851 Type III restriction enzyme, res subunit FORC55_1939 PF00271 Helicase conserved C-terminal domain FORC55_1943 PF00037 4Fe-4S binding domain FORC55_1943 PF11953 Domain of unknown function (DUF3470) FORC55_1944 PF00588 SpoU rRNA Methylase family FORC55_1944 PF08032 RNA 2'-O ribose methyltransferase substrate binding FORC55_1946 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FORC55_1947 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FORC55_1948 PF04223 Citrate lyase, alpha subunit (CitF) FORC55_1949 PF03328 HpcH/HpaI aldolase/citrate lyase family FORC55_1950 PF06857 Malonate decarboxylase delta subunit (MdcD) FORC55_1951 PF08218 Citrate lyase ligase C-terminal domain FORC55_1952 PF03390 2-hydroxycarboxylate transporter family FORC55_1953 PF04277 Oxaloacetate decarboxylase, gamma chain FORC55_1954 PF00364 Biotin-requiring enzyme FORC55_1954 PF02436 Conserved carboxylase domain FORC55_1954 PF00682 HMGL-like FORC55_1955 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FORC55_1956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_1956 PF17203 Single cache domain 3 FORC55_1957 PF00072 Response regulator receiver domain FORC55_1957 PF12431 Transcriptional regulator FORC55_1960 PF03466 LysR substrate binding domain FORC55_1960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_1961 PF01266 FAD dependent oxidoreductase FORC55_1962 PF01235 Sodium:alanine symporter family FORC55_1963 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FORC55_1963 PF01648 4'-phosphopantetheinyl transferase superfamily FORC55_1964 PF00005 ABC transporter FORC55_1965 PF01032 FecCD transport family FORC55_1966 PF01032 FecCD transport family FORC55_1967 PF01497 Periplasmic binding protein FORC55_1970 PF00425 chorismate binding enzyme FORC55_1971 PF13193 AMP-binding enzyme C-terminal domain FORC55_1971 PF00501 AMP-binding enzyme FORC55_1972 PF00550 Phosphopantetheine attachment site FORC55_1972 PF00857 Isochorismatase family FORC55_1973 PF01184 GPR1/FUN34/yaaH family FORC55_1974 PF06483 Chitinase C FORC55_1974 PF00704 Glycosyl hydrolases family 18 FORC55_1975 PF00117 Glutamine amidotransferase class-I FORC55_1975 PF00958 GMP synthase C terminal domain FORC55_1975 PF02540 NAD synthase FORC55_1976 PF00571 CBS domain FORC55_1976 PF00478 IMP dehydrogenase / GMP reductase domain FORC55_1977 PF02601 Exonuclease VII, large subunit FORC55_1977 PF13742 OB-fold nucleic acid binding domain FORC55_1980 PF01926 50S ribosome-binding GTPase FORC55_1980 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FORC55_1981 PF13360 PQQ-like domain FORC55_1982 PF09976 Tetratricopeptide repeat-like domain FORC55_1983 PF13393 Histidyl-tRNA synthetase FORC55_1983 PF03129 Anticodon binding domain FORC55_1984 PF04551 GcpE protein FORC55_1985 PF13464 Domain of unknown function (DUF4115) FORC55_1986 PF04055 Radical SAM superfamily FORC55_1987 PF00334 Nucleoside diphosphate kinase FORC55_1988 PF12404 Peptidase FORC55_1988 PF00883 Cytosol aminopeptidase family, catalytic domain FORC55_1989 PF04384 Iron-sulphur cluster assembly FORC55_1990 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_1991 PF00012 Hsp70 protein FORC55_1992 PF07743 HSCB C-terminal oligomerisation domain FORC55_1992 PF00226 DnaJ domain FORC55_1993 PF01521 Iron-sulphur cluster biosynthesis FORC55_1994 PF01592 NifU-like N terminal domain FORC55_1995 PF00266 Aminotransferase class-V FORC55_1996 PF02082 Transcriptional regulator FORC55_1997 PF00588 SpoU rRNA Methylase family FORC55_1998 PF00459 Inositol monophosphatase family FORC55_1999 PF01609 Transposase DDE domain FORC55_1999 PF13006 Insertion element 4 transposase N-terminal FORC55_2000 PF07549 SecD/SecF GG Motif FORC55_2000 PF02355 Protein export membrane protein FORC55_2001 PF07549 SecD/SecF GG Motif FORC55_2001 PF02355 Protein export membrane protein FORC55_2001 PF13721 SecD export protein N-terminal TM region FORC55_2002 PF02699 Preprotein translocase subunit FORC55_2003 PF01702 Queuine tRNA-ribosyltransferase FORC55_2005 PF02547 Queuosine biosynthesis protein FORC55_2006 PF00571 CBS domain FORC55_2007 PF00463 Isocitrate lyase family FORC55_2008 PF01274 Malate synthase FORC55_2009 PF03466 LysR substrate binding domain FORC55_2009 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2010 PF10417 C-terminal domain of 1-Cys peroxiredoxin FORC55_2010 PF00578 AhpC/TSA family FORC55_2011 PF03932 CutC family FORC55_2012 PF03976 Polyphosphate kinase 2 (PPK2) FORC55_2013 PF01895 PhoU domain FORC55_2014 PF00005 ABC transporter FORC55_2015 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2016 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2017 PF13089 Polyphosphate kinase N-terminal domain FORC55_2017 PF17941 Polyphosphate kinase C-terminal domain 1 FORC55_2017 PF13090 Polyphosphate kinase C-terminal domain 2 FORC55_2017 PF02503 Polyphosphate kinase middle domain FORC55_2018 PF02541 Ppx/GppA phosphatase family FORC55_2019 PF12849 PBP superfamily domain FORC55_2020 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2020 PF11808 Phosphate regulon sensor protein PhoR FORC55_2020 PF00989 PAS fold FORC55_2020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2021 PF00072 Response regulator receiver domain FORC55_2021 PF00486 Transcriptional regulatory protein, C terminal FORC55_2022 PF04381 Putative exonuclease, RdgC FORC55_2024 PF00037 4Fe-4S binding domain FORC55_2025 PF00881 Nitroreductase family FORC55_2028 PF10431 C-terminal, D2-small domain, of ClpB protein FORC55_2028 PF02861 Clp amino terminal domain, pathogenicity island component FORC55_2028 PF17871 AAA lid domain FORC55_2028 PF07724 AAA domain (Cdc48 subfamily) FORC55_2028 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_2030 PF01479 S4 domain FORC55_2030 PF00849 RNA pseudouridylate synthase FORC55_2031 PF13525 Outer membrane lipoprotein FORC55_2032 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FORC55_2033 PF01817 Chorismate mutase type II FORC55_2033 PF00800 Prephenate dehydratase FORC55_2034 PF13416 Bacterial extracellular solute-binding protein FORC55_2035 PF00563 EAL domain FORC55_2035 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2036 PF01931 Protein of unknown function DUF84 FORC55_2037 PF01371 Trp repressor protein FORC55_2038 PF14718 Soluble lytic murein transglycosylase L domain FORC55_2038 PF01464 Transglycosylase SLT domain FORC55_2039 PF12848 ABC transporter FORC55_2039 PF00005 ABC transporter FORC55_2040 PF07238 PilZ domain FORC55_2041 PF02153 Prephenate dehydrogenase FORC55_2041 PF01817 Chorismate mutase type II FORC55_2042 PF00793 DAHP synthetase I family FORC55_2043 PF06580 Histidine kinase FORC55_2043 PF07694 5TMR of 5TMR-LYT FORC55_2044 PF04397 LytTr DNA-binding domain FORC55_2044 PF00072 Response regulator receiver domain FORC55_2045 PF00933 Glycosyl hydrolase family 3 N terminal domain FORC55_2046 PF03702 Anhydro-N-acetylmuramic acid kinase FORC55_2047 PF13580 SIS domain FORC55_2050 PF02554 Carbon starvation protein CstA FORC55_2051 PF02401 LytB protein FORC55_2052 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC55_2053 PF01252 Signal peptidase (SPase) II FORC55_2054 PF06827 Zinc finger found in FPG and IleRS FORC55_2054 PF00133 tRNA synthetases class I (I, L, M and V) FORC55_2054 PF08264 Anticodon-binding domain of tRNA FORC55_2055 PF06574 FAD synthetase FORC55_2055 PF01687 Riboflavin kinase FORC55_2056 PF03023 Lipid II flippase MurJ FORC55_2057 PF01649 Ribosomal protein S20 FORC55_2058 PF01022 Bacterial regulatory protein, arsR family FORC55_2059 PF03466 LysR substrate binding domain FORC55_2059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2060 PF02690 Na+/Pi-cotransporter FORC55_2061 PF00303 Thymidylate synthase FORC55_2062 PF01790 Prolipoprotein diacylglyceryl transferase FORC55_2063 PF01925 Sulfite exporter TauE/SafE FORC55_2064 PF01590 GAF domain FORC55_2064 PF00391 PEP-utilising enzyme, mobile domain FORC55_2064 PF02896 PEP-utilising enzyme, TIM barrel domain FORC55_2064 PF05524 PEP-utilising enzyme, N-terminal FORC55_2065 PF00293 NUDIX domain FORC55_2067 PF02976 DNA mismatch repair enzyme MutH FORC55_2068 PF00248 Aldo/keto reductase family FORC55_2070 PF02954 Bacterial regulatory protein, Fis family FORC55_2070 PF00072 Response regulator receiver domain FORC55_2070 PF00158 Sigma-54 interaction domain FORC55_2071 PF01336 OB-fold nucleic acid binding domain FORC55_2071 PF00152 tRNA synthetases class II (D, K and N) FORC55_2072 PF00472 RF-1 domain FORC55_2072 PF03462 PCRF domain FORC55_2073 PF05525 Branched-chain amino acid transport protein FORC55_2074 PF05175 Methyltransferase small domain FORC55_2075 PF00271 Helicase conserved C-terminal domain FORC55_2075 PF00270 DEAD/DEAH box helicase FORC55_2076 PF03144 Elongation factor Tu domain 2 FORC55_2076 PF00009 Elongation factor Tu GTP binding domain FORC55_2076 PF16658 Class II release factor RF3, C-terminal domain FORC55_2077 PF00717 Peptidase S24-like FORC55_2077 PF01381 Helix-turn-helix FORC55_2084 PF11867 Domain of unknown function (DUF3387) FORC55_2084 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FORC55_2084 PF18766 SWI2/SNF2 ATPase FORC55_2086 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2086 PF00672 HAMP domain FORC55_2086 PF12729 Four helix bundle sensory module for signal transduction FORC55_2090 PF01381 Helix-turn-helix FORC55_2092 PF06122 Conjugative relaxosome accessory transposon protein FORC55_2095 PF00072 Response regulator receiver domain FORC55_2095 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2098 PF13817 IS66 C-terminal element FORC55_2098 PF13005 zinc-finger binding domain of transposase IS66 FORC55_2098 PF03050 Transposase IS66 family FORC55_2098 PF13007 Transposase C of IS166 homeodomain FORC55_2099 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2099 PF00563 EAL domain FORC55_2099 PF03707 Bacterial signalling protein N terminal repeat FORC55_2100 PF00665 Integrase core domain FORC55_2100 PF13333 Integrase core domain FORC55_2100 PF13276 HTH-like domain FORC55_2105 PF04002 RadC-like JAB domain FORC55_2106 PF00092 von Willebrand factor type A domain FORC55_2110 PF07728 AAA domain (dynein-related subfamily) FORC55_2113 PF00436 Single-strand binding protein family FORC55_2116 PF03050 Transposase IS66 family FORC55_2116 PF13007 Transposase C of IS166 homeodomain FORC55_2116 PF13005 zinc-finger binding domain of transposase IS66 FORC55_2116 PF13817 IS66 C-terminal element FORC55_2121 PF02028 BCCT, betaine/carnitine/choline family transporter FORC55_2124 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2124 PF00563 EAL domain FORC55_2124 PF03707 Bacterial signalling protein N terminal repeat FORC55_2125 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2126 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_2126 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC55_2128 PF07722 Peptidase C26 FORC55_2131 PF00753 Metallo-beta-lactamase superfamily FORC55_2132 PF10011 Predicted membrane protein (DUF2254) FORC55_2138 PF03050 Transposase IS66 family FORC55_2138 PF13007 Transposase C of IS166 homeodomain FORC55_2138 PF13005 zinc-finger binding domain of transposase IS66 FORC55_2138 PF13817 IS66 C-terminal element FORC55_2139 PF06986 Type-1V conjugative transfer system mating pair stabilisation FORC55_2140 PF06834 TraU protein FORC55_2142 PF10502 Signal peptidase, peptidase S26 FORC55_2145 PF10411 Disulfide bond isomerase protein N-terminus FORC55_2145 PF13098 Thioredoxin-like domain FORC55_2161 PF13737 Transposase DDE domain FORC55_2162 PF13657 HipA N-terminal domain FORC55_2162 PF07804 HipA-like C-terminal domain FORC55_2163 PF01381 Helix-turn-helix FORC55_2164 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2164 PF03707 Bacterial signalling protein N terminal repeat FORC55_2164 PF00563 EAL domain FORC55_2167 PF13508 Acetyltransferase (GNAT) domain FORC55_2169 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2169 PF03707 Bacterial signalling protein N terminal repeat FORC55_2169 PF00563 EAL domain FORC55_2174 PF07719 Tetratricopeptide repeat FORC55_2174 PF13181 Tetratricopeptide repeat FORC55_2175 PF00575 S1 RNA binding domain FORC55_2175 PF03725 3' exoribonuclease family, domain 2 FORC55_2175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FORC55_2175 PF00013 KH domain FORC55_2175 PF01138 3' exoribonuclease family, domain 1 FORC55_2176 PF00312 Ribosomal protein S15 FORC55_2177 PF09157 Pseudouridine synthase II TruB, C-terminal FORC55_2177 PF01509 TruB family pseudouridylate synthase (N terminal domain) FORC55_2177 PF16198 tRNA pseudouridylate synthase B C-terminal domain FORC55_2178 PF02033 Ribosome-binding factor A FORC55_2179 PF00009 Elongation factor Tu GTP binding domain FORC55_2179 PF11987 Translation-initiation factor 2 FORC55_2179 PF04760 Translation initiation factor IF-2, N-terminal region FORC55_2179 PF08364 Bacterial translation initiation factor IF-2 associated region FORC55_2180 PF00575 S1 RNA binding domain FORC55_2180 PF13184 NusA-like KH domain FORC55_2180 PF08529 NusA N-terminal domain FORC55_2181 PF17384 RimP C-terminal SH3 domain FORC55_2181 PF02576 RimP N-terminal domain FORC55_2182 PF03840 Preprotein translocase SecG subunit FORC55_2184 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC55_2184 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC55_2184 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC55_2184 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC55_2185 PF00809 Pterin binding enzyme FORC55_2186 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_2186 PF01434 Peptidase family M41 FORC55_2186 PF17862 AAA+ lid domain FORC55_2186 PF06480 FtsH Extracellular FORC55_2187 PF01728 FtsJ-like methyltransferase FORC55_2188 PF01985 CRS1 / YhbY (CRM) domain FORC55_2189 PF03449 Transcription elongation factor, N-terminal FORC55_2189 PF01272 Transcription elongation factor, GreA/GreB, C-term FORC55_2190 PF13609 Gram-negative porin FORC55_2191 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FORC55_2192 PF00579 tRNA synthetases class I (W and Y) FORC55_2192 PF01479 S4 domain FORC55_2193 PF04225 Opacity-associated protein A LysM-like domain FORC55_2193 PF01551 Peptidase family M23 FORC55_2194 PF00873 AcrB/AcrD/AcrF family FORC55_2196 PF01521 Iron-sulphur cluster biosynthesis FORC55_2197 PF00202 Aminotransferase class-III FORC55_2198 PF01594 AI-2E family transporter FORC55_2199 PF05175 Methyltransferase small domain FORC55_2199 PF08468 Methyltransferase small domain N-terminal FORC55_2200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2200 PF09308 LuxQ, periplasmic FORC55_2200 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2200 PF00072 Response regulator receiver domain FORC55_2201 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_2202 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2203 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2203 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_2204 PF00005 ABC transporter FORC55_2204 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_2205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_2205 PF00005 ABC transporter FORC55_2207 PF01869 BadF/BadG/BcrA/BcrD ATPase family FORC55_2208 PF02838 Glycosyl hydrolase family 20, domain 2 FORC55_2208 PF00728 Glycosyl hydrolase family 20, catalytic domain FORC55_2209 PF06165 Glycosyltransferase family 36 FORC55_2209 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FORC55_2210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC55_2210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC55_2210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC55_2210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC55_2211 PF00005 ABC transporter FORC55_2211 PF08402 TOBE domain FORC55_2213 PF13416 Bacterial extracellular solute-binding protein FORC55_2214 PF00909 Ammonium Transporter Family FORC55_2215 PF00543 Nitrogen regulatory protein P-II FORC55_2216 PF06062 Uncharacterised protein family (UPF0231) FORC55_2217 PF11791 Aconitate B N-terminal domain FORC55_2217 PF06434 Aconitate hydratase 2 N-terminus FORC55_2217 PF00330 Aconitase family (aconitate hydratase) FORC55_2218 PF01734 Patatin-like phospholipase FORC55_2219 PF14814 Bifunctional transglycosylase second domain FORC55_2219 PF00905 Penicillin binding protein transpeptidase domain FORC55_2219 PF00912 Transglycosylase FORC55_2220 PF00270 DEAD/DEAH box helicase FORC55_2220 PF08482 ATP-dependent helicase C-terminal FORC55_2220 PF00271 Helicase conserved C-terminal domain FORC55_2220 PF04408 Helicase associated domain (HA2) FORC55_2222 PF03749 Sugar fermentation stimulation protein RE domain FORC55_2222 PF17746 SfsA N-terminal OB domain FORC55_2223 PF01258 Prokaryotic dksA/traR C4-type zinc finger FORC55_2224 PF00749 tRNA synthetases class I (E and Q), catalytic domain FORC55_2225 PF12627 Probable RNA and SrmB- binding site of polymerase A FORC55_2225 PF01743 Poly A polymerase head domain FORC55_2225 PF12626 Polymerase A arginine-rich C-terminus FORC55_2226 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FORC55_2227 PF02548 Ketopantoate hydroxymethyltransferase FORC55_2228 PF02569 Pantoate-beta-alanine ligase FORC55_2229 PF01061 ABC-2 type transporter FORC55_2230 PF00005 ABC transporter FORC55_2231 PF00916 Sulfate permease family FORC55_2231 PF01740 STAS domain FORC55_2232 PF00484 Carbonic anhydrase FORC55_2233 PF00156 Phosphoribosyl transferase domain FORC55_2234 PF00440 Bacterial regulatory proteins, tetR family FORC55_2235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC55_2236 PF04348 LppC putative lipoprotein FORC55_2237 PF02021 Uncharacterised protein family UPF0102 FORC55_2238 PF13580 SIS domain FORC55_2239 PF04972 BON domain FORC55_2240 PF04386 Stringent starvation protein B FORC55_2241 PF02798 Glutathione S-transferase, N-terminal domain FORC55_2241 PF00043 Glutathione S-transferase, C-terminal domain FORC55_2242 PF02167 Cytochrome C1 family FORC55_2243 PF00033 Cytochrome b/b6/petB FORC55_2243 PF00032 Cytochrome b(C-terminal)/b6/petD FORC55_2244 PF00355 Rieske [2Fe-2S] domain FORC55_2244 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FORC55_2245 PF00380 Ribosomal protein S9/S16 FORC55_2246 PF00572 Ribosomal protein L13 FORC55_2247 PF03969 AFG1-like ATPase FORC55_2249 PF00595 PDZ domain FORC55_2250 PF13180 PDZ domain FORC55_2251 PF13006 Insertion element 4 transposase N-terminal FORC55_2251 PF01609 Transposase DDE domain FORC55_2252 PF01245 Ribosomal protein L19 FORC55_2253 PF01746 tRNA (Guanine-1)-methyltransferase FORC55_2254 PF01782 RimM N-terminal domain FORC55_2254 PF05239 PRC-barrel domain FORC55_2255 PF00886 Ribosomal protein S16 FORC55_2256 PF02881 SRP54-type protein, helical bundle domain FORC55_2256 PF00448 SRP54-type protein, GTPase domain FORC55_2256 PF02978 Signal peptide binding domain FORC55_2257 PF01578 Cytochrome C assembly protein FORC55_2258 PF03471 Transporter associated domain FORC55_2258 PF01595 Cyclin M transmembrane N-terminal domain FORC55_2258 PF00571 CBS domain FORC55_2259 PF02664 S-Ribosylhomocysteinase (LuxS) FORC55_2260 PF04262 Glutamate-cysteine ligase FORC55_2261 PF05193 Peptidase M16 inactive domain FORC55_2261 PF00675 Insulinase (Peptidase family M16) FORC55_2262 PF09335 SNARE associated Golgi protein FORC55_2264 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FORC55_2265 PF00364 Biotin-requiring enzyme FORC55_2265 PF02436 Conserved carboxylase domain FORC55_2265 PF00682 HMGL-like FORC55_2266 PF04277 Oxaloacetate decarboxylase, gamma chain FORC55_2267 PF02599 Global regulator protein family FORC55_2268 PF13840 ACT domain FORC55_2268 PF01842 ACT domain FORC55_2268 PF00696 Amino acid kinase family FORC55_2269 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FORC55_2269 PF01411 tRNA synthetases class II (A) FORC55_2269 PF02272 DHHA1 domain FORC55_2270 PF02631 RecX family FORC55_2271 PF00154 recA bacterial DNA recombination protein FORC55_2272 PF02464 Competence-damaged protein FORC55_2273 PF00005 ABC transporter FORC55_2273 PF12857 TOBE-like domain FORC55_2274 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2275 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2277 PF00291 Pyridoxal-phosphate dependent enzyme FORC55_2278 PF01624 MutS domain I FORC55_2278 PF05192 MutS domain III FORC55_2278 PF05190 MutS family domain IV FORC55_2278 PF00488 MutS domain V FORC55_2278 PF05188 MutS domain II FORC55_2279 PF00140 Sigma-70 factor, region 1.2 FORC55_2279 PF04539 Sigma-70 region 3 FORC55_2279 PF04542 Sigma-70 region 2 FORC55_2279 PF04545 Sigma-70, region 4 FORC55_2280 PF01476 LysM domain FORC55_2280 PF01551 Peptidase family M23 FORC55_2282 PF01975 Survival protein SurE FORC55_2283 PF01142 tRNA pseudouridine synthase D (TruD) FORC55_2284 PF02542 YgbB family FORC55_2285 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FORC55_2286 PF04977 Septum formation initiator FORC55_2287 PF02673 Bacitracin resistance protein BacA FORC55_2288 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FORC55_2289 PF02152 Dihydroneopterin aldolase FORC55_2290 PF02660 Glycerol-3-phosphate acyltransferase FORC55_2291 PF00561 alpha/beta hydrolase fold FORC55_2292 PF00814 Glycoprotease family FORC55_2294 PF01165 Ribosomal protein S21 FORC55_2295 PF09424 Yqey-like protein FORC55_2297 PF08278 DNA primase DnaG DnaB-binding FORC55_2297 PF01807 CHC2 zinc finger FORC55_2297 PF08275 DNA primase catalytic core, N-terminal domain FORC55_2297 PF10410 DnaB-helicase binding domain of primase FORC55_2298 PF04545 Sigma-70, region 4 FORC55_2298 PF04539 Sigma-70 region 3 FORC55_2298 PF04542 Sigma-70 region 2 FORC55_2298 PF04546 Sigma-70, non-essential region FORC55_2298 PF00140 Sigma-70 factor, region 1.2 FORC55_2298 PF03979 Sigma-70 factor, region 1.1 FORC55_2300 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC55_2301 PF01380 SIS domain FORC55_2302 PF00455 DeoR C terminal sensor domain FORC55_2302 PF08220 DeoR-like helix-turn-helix domain FORC55_2303 PF00224 Pyruvate kinase, barrel domain FORC55_2303 PF02887 Pyruvate kinase, alpha/beta domain FORC55_2304 PF04402 Protein of unknown function (DUF541) FORC55_2305 PF03466 LysR substrate binding domain FORC55_2305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2306 PF01810 LysE type translocator FORC55_2307 PF05552 Conserved TM helix FORC55_2307 PF00924 Mechanosensitive ion channel FORC55_2308 PF01116 Fructose-bisphosphate aldolase class-II FORC55_2310 PF00162 Phosphoglycerate kinase FORC55_2311 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC55_2311 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC55_2312 PF07715 TonB-dependent Receptor Plug Domain FORC55_2312 PF00593 TonB dependent receptor FORC55_2313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2313 PF03466 LysR substrate binding domain FORC55_2314 PF02779 Transketolase, pyrimidine binding domain FORC55_2314 PF02780 Transketolase, C-terminal domain FORC55_2314 PF00456 Transketolase, thiamine diphosphate binding domain FORC55_2316 PF00438 S-adenosylmethionine synthetase, N-terminal domain FORC55_2316 PF02773 S-adenosylmethionine synthetase, C-terminal domain FORC55_2316 PF02772 S-adenosylmethionine synthetase, central domain FORC55_2317 PF17283 SprT-like zinc ribbon domain FORC55_2317 PF10263 SprT-like family FORC55_2318 PF04231 Endonuclease I FORC55_2319 PF04452 RNA methyltransferase FORC55_2320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FORC55_2320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FORC55_2321 PF02622 Uncharacterized ACR, COG1678 FORC55_2322 PF03652 Holliday junction resolvase FORC55_2323 PF01479 S4 domain FORC55_2323 PF00579 tRNA synthetases class I (W and Y) FORC55_2325 PF00437 Type II/IV secretion system protein FORC55_2326 PF00437 Type II/IV secretion system protein FORC55_2327 PF01168 Alanine racemase, N-terminal domain FORC55_2328 PF14748 Pyrroline-5-carboxylate reductase dimerisation FORC55_2328 PF03807 NADP oxidoreductase coenzyme F420-dependent FORC55_2329 PF02325 YGGT family FORC55_2330 PF02594 Uncharacterised ACR, YggU family COG1872 FORC55_2332 PF01725 Ham1 family FORC55_2333 PF04055 Radical SAM superfamily FORC55_2333 PF06969 HemN C-terminal domain FORC55_2334 PF04960 Glutaminase FORC55_2335 PF02390 Putative methyltransferase FORC55_2337 PF14815 NUDIX domain FORC55_2337 PF00730 HhH-GPD superfamily base excision DNA repair protein FORC55_2337 PF10576 Iron-sulfur binding domain of endonuclease III FORC55_2337 PF00633 Helix-hairpin-helix motif FORC55_2338 PF04362 Bacterial Fe(2+) trafficking FORC55_2339 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FORC55_2339 PF01464 Transglycosylase SLT domain FORC55_2340 PF17200 Single Cache domain 2 FORC55_2340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2340 PF00672 HAMP domain FORC55_2341 PF00226 DnaJ domain FORC55_2341 PF05099 Tellurite resistance protein TerB FORC55_2342 PF03968 OstA-like protein FORC55_2342 PF04453 LPS transport system D FORC55_2343 PF09312 SurA N-terminal domain FORC55_2344 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FORC55_2345 PF00398 Ribosomal RNA adenine dimethylase FORC55_2346 PF04379 ApaG domain FORC55_2347 PF00149 Calcineurin-like phosphoesterase FORC55_2348 PF00186 Dihydrofolate reductase FORC55_2349 PF12821 Threonine/Serine exporter, ThrE FORC55_2350 PF06738 Putative threonine/serine exporter FORC55_2351 PF01018 GTP1/OBG FORC55_2351 PF01926 50S ribosome-binding GTPase FORC55_2352 PF01016 Ribosomal L27 protein FORC55_2353 PF00829 Ribosomal prokaryotic L21 protein FORC55_2354 PF00348 Polyprenyl synthetase FORC55_2355 PF13520 Amino acid permease FORC55_2356 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FORC55_2356 PF00056 lactate/malate dehydrogenase, NAD binding domain FORC55_2357 PF02863 Arginine repressor, C-terminal domain FORC55_2357 PF01316 Arginine repressor, DNA binding domain FORC55_2358 PF16868 NMT1-like family FORC55_2360 PF00582 Universal stress protein family FORC55_2363 PF06877 Regulator of ribonuclease activity B FORC55_2365 PF00970 Oxidoreductase FAD-binding domain FORC55_2365 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_2365 PF00175 Oxidoreductase NAD-binding domain FORC55_2366 PF03063 Prismane/CO dehydrogenase family FORC55_2367 PF01523 Putative modulator of DNA gyrase FORC55_2368 PF00795 Carbon-nitrogen hydrolase FORC55_2369 PF13502 AsmA-like C-terminal region FORC55_2369 PF13116 Protein of unknown function FORC55_2370 PF00575 S1 RNA binding domain FORC55_2370 PF10150 Ribonuclease E/G family FORC55_2371 PF02545 Maf-like protein FORC55_2372 PF04093 rod shape-determining protein MreD FORC55_2373 PF04085 rod shape-determining protein MreC FORC55_2380 PF00114 Pilin (bacterial filament) FORC55_2380 PF07963 Prokaryotic N-terminal methylation motif FORC55_2383 PF00482 Type II secretion system (T2SS), protein F FORC55_2384 PF00437 Type II/IV secretion system protein FORC55_2386 PF13401 AAA domain FORC55_2386 PF01471 Putative peptidoglycan binding domain FORC55_2387 PF11741 AMIN domain FORC55_2387 PF00263 Bacterial type II and III secretion system protein FORC55_2387 PF03958 Bacterial type II/III secretion system short domain FORC55_2387 PF07660 Secretin and TonB N terminus short domain FORC55_2391 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2391 PF00563 EAL domain FORC55_2391 PF17157 Gammaproteobacterial periplasmic sensor domain FORC55_2392 PF00436 Single-strand binding protein family FORC55_2393 PF00196 Bacterial regulatory proteins, luxR family FORC55_2394 PF00483 Nucleotidyl transferase FORC55_2395 PF17760 UvrA interaction domain FORC55_2395 PF17755 UvrA DNA-binding domain FORC55_2395 PF00005 ABC transporter FORC55_2397 PF00266 Aminotransferase class-V FORC55_2398 PF01842 ACT domain FORC55_2398 PF00696 Amino acid kinase family FORC55_2399 PF02574 Homocysteine S-methyltransferase FORC55_2399 PF02310 B12 binding domain FORC55_2399 PF02607 B12 binding domain FORC55_2399 PF02965 Vitamin B12 dependent methionine synthase, activation domain FORC55_2399 PF00809 Pterin binding enzyme FORC55_2400 PF00999 Sodium/hydrogen exchanger family FORC55_2401 PF01507 Phosphoadenosine phosphosulfate reductase family FORC55_2402 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FORC55_2402 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FORC55_2403 PF00667 FAD binding domain FORC55_2403 PF00258 Flavodoxin FORC55_2403 PF00175 Oxidoreductase NAD-binding domain FORC55_2407 PF09583 Phage shock protein G (Phageshock_PspG) FORC55_2408 PF01207 Dihydrouridine synthase (Dus) FORC55_2409 PF01475 Ferric uptake regulator family FORC55_2411 PF12706 Beta-lactamase superfamily domain FORC55_2412 PF00342 Phosphoglucose isomerase FORC55_2413 PF01894 Uncharacterised protein family UPF0047 FORC55_2414 PF00842 Alanine racemase, C-terminal domain FORC55_2414 PF01168 Alanine racemase, N-terminal domain FORC55_2415 PF03796 DnaB-like helicase C terminal domain FORC55_2415 PF00772 DnaB-like helicase N terminal domain FORC55_2417 PF03948 Ribosomal protein L9, C-terminal domain FORC55_2417 PF01281 Ribosomal protein L9, N-terminal domain FORC55_2418 PF01084 Ribosomal protein S18 FORC55_2419 PF00436 Single-strand binding protein family FORC55_2420 PF01250 Ribosomal protein S6 FORC55_2421 PF00210 Ferritin-like domain FORC55_2422 PF03143 Elongation factor Tu C-terminal domain FORC55_2422 PF03144 Elongation factor Tu domain 2 FORC55_2422 PF00009 Elongation factor Tu GTP binding domain FORC55_2423 PF00679 Elongation factor G C-terminus FORC55_2423 PF14492 Elongation Factor G, domain II FORC55_2423 PF03764 Elongation factor G, domain IV FORC55_2423 PF00009 Elongation factor Tu GTP binding domain FORC55_2423 PF03144 Elongation factor Tu domain 2 FORC55_2424 PF00177 Ribosomal protein S7p/S5e FORC55_2425 PF00164 Ribosomal protein S12/S23 FORC55_2427 PF02635 DsrE/DsrF-like family FORC55_2428 PF02635 DsrE/DsrF-like family FORC55_2429 PF08348 YheO-like PAS domain FORC55_2429 PF13309 HTH domain FORC55_2430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC55_2430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FORC55_2432 PF04102 SlyX FORC55_2433 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FORC55_2434 PF01145 SPFH domain / Band 7 family FORC55_2435 PF01145 SPFH domain / Band 7 family FORC55_2435 PF12221 Bacterial membrane protein N terminal FORC55_2436 PF01926 50S ribosome-binding GTPase FORC55_2436 PF13167 GTP-binding GTPase N-terminal FORC55_2436 PF16360 GTP-binding GTPase Middle Region FORC55_2437 PF17209 Hfq protein FORC55_2439 PF08676 MutL C terminal dimerisation domain FORC55_2439 PF01119 DNA mismatch repair protein, C-terminal domain FORC55_2440 PF01520 N-acetylmuramoyl-L-alanine amidase FORC55_2441 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FORC55_2442 PF08331 Domain of unknown function (DUF1730) FORC55_2443 PF00929 Exonuclease FORC55_2444 PF03193 RsgA GTPase FORC55_2445 PF02666 Phosphatidylserine decarboxylase FORC55_2446 PF00939 Sodium:sulfate symporter transmembrane region FORC55_2448 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FORC55_2448 PF01676 Metalloenzyme superfamily FORC55_2449 PF01551 Peptidase family M23 FORC55_2451 PF08360 QacR-like protein, C-terminal region FORC55_2451 PF00440 Bacterial regulatory proteins, tetR family FORC55_2452 PF01208 Uroporphyrinogen decarboxylase (URO-D) FORC55_2453 PF00293 NUDIX domain FORC55_2453 PF09297 NADH pyrophosphatase zinc ribbon domain FORC55_2454 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FORC55_2455 PF04998 RNA polymerase Rpb1, domain 5 FORC55_2455 PF05000 RNA polymerase Rpb1, domain 4 FORC55_2455 PF04997 RNA polymerase Rpb1, domain 1 FORC55_2455 PF04983 RNA polymerase Rpb1, domain 3 FORC55_2455 PF00623 RNA polymerase Rpb1, domain 2 FORC55_2456 PF04560 RNA polymerase Rpb2, domain 7 FORC55_2456 PF00562 RNA polymerase Rpb2, domain 6 FORC55_2456 PF04563 RNA polymerase beta subunit FORC55_2456 PF10385 RNA polymerase beta subunit external 1 domain FORC55_2456 PF04565 RNA polymerase Rpb2, domain 3 FORC55_2456 PF04561 RNA polymerase Rpb2, domain 2 FORC55_2457 PF00542 Ribosomal protein L7/L12 C-terminal domain FORC55_2457 PF16320 Ribosomal protein L7/L12 dimerisation domain FORC55_2458 PF00466 Ribosomal protein L10 FORC55_2459 PF00687 Ribosomal protein L1p/L10e family FORC55_2460 PF03946 Ribosomal protein L11, N-terminal domain FORC55_2460 PF00298 Ribosomal protein L11, RNA binding domain FORC55_2461 PF00467 KOW motif FORC55_2461 PF02357 Transcription termination factor nusG FORC55_2462 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FORC55_2463 PF03143 Elongation factor Tu C-terminal domain FORC55_2463 PF03144 Elongation factor Tu domain 2 FORC55_2463 PF00009 Elongation factor Tu GTP binding domain FORC55_2464 PF00485 Phosphoribulokinase / Uridine kinase family FORC55_2465 PF03099 Biotin/lipoate A/B protein ligase family FORC55_2465 PF02237 Biotin protein ligase C terminal domain FORC55_2465 PF08279 HTH domain FORC55_2466 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FORC55_2466 PF01565 FAD binding domain FORC55_2468 PF13091 PLD-like domain FORC55_2469 PF00175 Oxidoreductase NAD-binding domain FORC55_2470 PF00970 Oxidoreductase FAD-binding domain FORC55_2470 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_2470 PF00175 Oxidoreductase NAD-binding domain FORC55_2471 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FORC55_2473 PF07498 Rho termination factor, N-terminal domain FORC55_2473 PF07497 Rho termination factor, RNA-binding domain FORC55_2473 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC55_2474 PF00085 Thioredoxin FORC55_2475 PF00271 Helicase conserved C-terminal domain FORC55_2475 PF00270 DEAD/DEAH box helicase FORC55_2476 PF02541 Ppx/GppA phosphatase family FORC55_2477 PF00072 Response regulator receiver domain FORC55_2477 PF09456 RcsC Alpha-Beta-Loop (ABL) FORC55_2477 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2478 PF12832 MFS_1 like family FORC55_2481 PF16177 Acetyl-coenzyme A synthetase N-terminus FORC55_2481 PF00501 AMP-binding enzyme FORC55_2481 PF13193 AMP-binding enzyme C-terminal domain FORC55_2482 PF01220 Dehydroquinase class II FORC55_2483 PF00364 Biotin-requiring enzyme FORC55_2484 PF00289 Biotin carboxylase, N-terminal domain FORC55_2484 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FORC55_2484 PF02785 Biotin carboxylase C-terminal domain FORC55_2486 PF01207 Dihydrouridine synthase (Dus) FORC55_2487 PF02954 Bacterial regulatory protein, Fis family FORC55_2488 PF00356 Bacterial regulatory proteins, lacI family FORC55_2488 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC55_2490 PF11647 Membrane Localization Domain FORC55_2491 PF01699 Sodium/calcium exchanger protein FORC55_2492 PF00920 Dehydratase family FORC55_2493 PF01202 Shikimate kinase FORC55_2494 PF02447 GntP family permease FORC55_2495 PF01081 KDPG and KHG aldolase FORC55_2496 PF00593 TonB dependent receptor FORC55_2496 PF07715 TonB-dependent Receptor Plug Domain FORC55_2498 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2498 PF00672 HAMP domain FORC55_2498 PF17200 Single Cache domain 2 FORC55_2499 PF01276 Orn/Lys/Arg decarboxylase, major domain FORC55_2499 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FORC55_2499 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FORC55_2500 PF13520 Amino acid permease FORC55_2502 PF00486 Transcriptional regulatory protein, C terminal FORC55_2502 PF18500 CadC C-terminal domain 1 FORC55_2503 PF13411 MerR HTH family regulatory protein FORC55_2505 PF02142 MGS-like domain FORC55_2505 PF01808 AICARFT/IMPCHase bienzyme FORC55_2506 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FORC55_2506 PF02844 Phosphoribosylglycinamide synthetase, N domain FORC55_2506 PF02843 Phosphoribosylglycinamide synthetase, C domain FORC55_2508 PF00216 Bacterial DNA-binding protein FORC55_2509 PF01595 Cyclin M transmembrane N-terminal domain FORC55_2509 PF00571 CBS domain FORC55_2511 PF04222 Protein of unknown function (DUF416) FORC55_2512 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC55_2513 PF03167 Uracil DNA glycosylase superfamily FORC55_2514 PF00924 Mechanosensitive ion channel FORC55_2518 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FORC55_2518 PF10996 Beta-Casp domain FORC55_2518 PF00753 Metallo-beta-lactamase superfamily FORC55_2519 PF02719 Polysaccharide biosynthesis protein FORC55_2520 PF02397 Bacterial sugar transferase FORC55_2521 PF01370 NAD dependent epimerase/dehydratase family FORC55_2523 PF02350 UDP-N-acetylglucosamine 2-epimerase FORC55_2524 PF01370 NAD dependent epimerase/dehydratase family FORC55_2525 PF02719 Polysaccharide biosynthesis protein FORC55_2525 PF08485 Polysaccharide biosynthesis protein C-terminal FORC55_2526 PF00977 Histidine biosynthesis protein FORC55_2527 PF00117 Glutamine amidotransferase class-I FORC55_2528 PF00795 Carbon-nitrogen hydrolase FORC55_2528 PF02540 NAD synthase FORC55_2531 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_2533 PF03102 NeuB family FORC55_2533 PF08666 SAF domain FORC55_2536 PF02348 Cytidylyltransferase FORC55_2537 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FORC55_2539 PF01609 Transposase DDE domain FORC55_2539 PF13808 DDE_Tnp_1-associated FORC55_2540 PF01609 Transposase DDE domain FORC55_2540 PF13808 DDE_Tnp_1-associated FORC55_2541 PF02706 Chain length determinant protein FORC55_2542 PF01370 NAD dependent epimerase/dehydratase family FORC55_2546 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FORC55_2548 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FORC55_2549 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FORC55_2554 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_2555 PF01757 Acyltransferase family FORC55_2557 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FORC55_2558 PF00535 Glycosyl transferase family 2 FORC55_2559 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FORC55_2560 PF01467 Cytidylyltransferase-like FORC55_2561 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FORC55_2561 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FORC55_2561 PF06827 Zinc finger found in FPG and IleRS FORC55_2563 PF00471 Ribosomal protein L33 FORC55_2564 PF00830 Ribosomal L28 family FORC55_2565 PF04002 RadC-like JAB domain FORC55_2566 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2566 PF17200 Single Cache domain 2 FORC55_2566 PF00672 HAMP domain FORC55_2567 PF04127 DNA / pantothenate metabolism flavoprotein FORC55_2567 PF02441 Flavoprotein FORC55_2568 PF00440 Bacterial regulatory proteins, tetR family FORC55_2569 PF03279 Bacterial lipid A biosynthesis acyltransferase FORC55_2570 PF03279 Bacterial lipid A biosynthesis acyltransferase FORC55_2571 PF00156 Phosphoribosyl transferase domain FORC55_2572 PF01138 3' exoribonuclease family, domain 1 FORC55_2572 PF03725 3' exoribonuclease family, domain 2 FORC55_2573 PF03755 YicC-like family, N-terminal region FORC55_2573 PF08340 Domain of unknown function (DUF1732) FORC55_2577 PF06114 IrrE N-terminal-like domain FORC55_2582 PF03606 C4-dicarboxylate anaerobic carrier FORC55_2584 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2584 PF03466 LysR substrate binding domain FORC55_2589 PF00145 C-5 cytosine-specific DNA methylase FORC55_2600 PF03350 Uncharacterized protein family, UPF0114 FORC55_2602 PF00367 phosphotransferase system, EIIB FORC55_2602 PF02378 Phosphotransferase system, EIIC FORC55_2603 PF13580 SIS domain FORC55_2604 PF01380 SIS domain FORC55_2604 PF01418 Helix-turn-helix domain, rpiR family FORC55_2605 PF01032 FecCD transport family FORC55_2606 PF01497 Periplasmic binding protein FORC55_2607 PF00005 ABC transporter FORC55_2608 PF00593 TonB dependent receptor FORC55_2608 PF07715 TonB-dependent Receptor Plug Domain FORC55_2609 PF00664 ABC transporter transmembrane region FORC55_2609 PF00005 ABC transporter FORC55_2612 PF00270 DEAD/DEAH box helicase FORC55_2612 PF00271 Helicase conserved C-terminal domain FORC55_2612 PF00570 HRDC domain FORC55_2612 PF16124 RecQ zinc-binding FORC55_2612 PF09382 RQC domain FORC55_2613 PF00892 EamA-like transporter family FORC55_2615 PF12833 Helix-turn-helix domain FORC55_2616 PF01810 LysE type translocator FORC55_2617 PF00580 UvrD/REP helicase N-terminal domain FORC55_2617 PF13361 UvrD-like helicase C-terminal domain FORC55_2618 PF01432 Peptidase family M3 FORC55_2619 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FORC55_2620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC55_2620 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_2623 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_2623 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_2626 PF00005 ABC transporter FORC55_2626 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_2628 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FORC55_2629 PF00580 UvrD/REP helicase N-terminal domain FORC55_2629 PF13361 UvrD-like helicase C-terminal domain FORC55_2630 PF00440 Bacterial regulatory proteins, tetR family FORC55_2631 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC55_2632 PF00873 AcrB/AcrD/AcrF family FORC55_2633 PF04380 Membrane fusogenic activity FORC55_2634 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FORC55_2634 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FORC55_2635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2635 PF03466 LysR substrate binding domain FORC55_2637 PF12724 Flavodoxin domain FORC55_2638 PF02386 Cation transport protein FORC55_2639 PF09186 Domain of unknown function (DUF1949) FORC55_2639 PF01205 Uncharacterized protein family UPF0029 FORC55_2640 PF00378 Enoyl-CoA hydratase/isomerase FORC55_2640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FORC55_2640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FORC55_2641 PF02803 Thiolase, C-terminal domain FORC55_2641 PF00108 Thiolase, N-terminal domain FORC55_2642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2642 PF03466 LysR substrate binding domain FORC55_2643 PF07690 Major Facilitator Superfamily FORC55_2644 PF12804 MobA-like NTP transferase domain FORC55_2644 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_2645 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FORC55_2645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FORC55_2646 PF02874 ATP synthase alpha/beta family, beta-barrel domain FORC55_2646 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC55_2647 PF00231 ATP synthase FORC55_2648 PF02874 ATP synthase alpha/beta family, beta-barrel domain FORC55_2648 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC55_2648 PF00306 ATP synthase alpha/beta chain, C terminal domain FORC55_2649 PF00213 ATP synthase delta (OSCP) subunit FORC55_2650 PF00430 ATP synthase B/B' CF(0) FORC55_2651 PF00137 ATP synthase subunit C FORC55_2652 PF00119 ATP synthase A chain FORC55_2653 PF03899 ATP synthase I chain FORC55_2654 PF17762 HTH domain found in ParB protein FORC55_2654 PF02195 ParB-like nuclease domain FORC55_2655 PF13614 AAA domain FORC55_2656 PF02527 rRNA small subunit methyltransferase G FORC55_2657 PF01134 Glucose inhibited division protein A FORC55_2657 PF13932 GidA associated domain FORC55_2658 PF00258 Flavodoxin FORC55_2672 PF03050 Transposase IS66 family FORC55_2672 PF13817 IS66 C-terminal element FORC55_2672 PF13007 Transposase C of IS166 homeodomain FORC55_2672 PF13005 zinc-finger binding domain of transposase IS66 FORC55_2675 PF02384 N-6 DNA Methylase FORC55_2682 PF00589 Phage integrase family FORC55_2682 PF02899 Phage integrase, N-terminal SAM-like domain FORC55_2683 PF10396 GTP-binding protein TrmE N-terminus FORC55_2683 PF12631 MnmE helical domain FORC55_2683 PF01926 50S ribosome-binding GTPase FORC55_2684 PF02096 60Kd inner membrane protein FORC55_2684 PF14849 YidC periplasmic domain FORC55_2685 PF00825 Ribonuclease P FORC55_2686 PF00468 Ribosomal protein L34 FORC55_2687 PF00005 ABC transporter FORC55_2688 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2689 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_2690 PF08775 ParB family FORC55_2690 PF02195 ParB-like nuclease domain FORC55_2691 PF13614 AAA domain FORC55_2691 PF18607 ParA helix turn helix domain FORC55_2696 PF01709 Transcriptional regulator FORC55_2697 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FORC55_2697 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FORC55_2698 PF17200 Single Cache domain 2 FORC55_2698 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2698 PF00672 HAMP domain FORC55_2699 PF10928 Protein of unknown function (DUF2810) FORC55_2700 PF17874 MalT-like TPR region FORC55_2700 PF00196 Bacterial regulatory proteins, luxR family FORC55_2701 PF00343 Carbohydrate phosphorylase FORC55_2702 PF02446 4-alpha-glucanotransferase FORC55_2703 PF02806 Alpha amylase, C-terminal all-beta domain FORC55_2703 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FORC55_2703 PF00128 Alpha amylase, catalytic domain FORC55_2704 PF05638 Type VI secretion system effector, Hcp FORC55_2705 PF16671 Actin cross-linking domain FORC55_2705 PF04717 Type VI secretion system, phage-baseplate injector FORC55_2710 PF01168 Alanine racemase, N-terminal domain FORC55_2710 PF00842 Alanine racemase, C-terminal domain FORC55_2710 PF01757 Acyltransferase family FORC55_2712 PF00939 Sodium:sulfate symporter transmembrane region FORC55_2713 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FORC55_2714 PF08329 Chitinase A, N-terminal domain FORC55_2714 PF00704 Glycosyl hydrolases family 18 FORC55_2718 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2718 PF00672 HAMP domain FORC55_2718 PF02743 Cache domain FORC55_2723 PF01569 PAP2 superfamily FORC55_2724 PF00375 Sodium:dicarboxylate symporter family FORC55_2726 PF02630 SCO1/SenC FORC55_2729 PF03616 Sodium/glutamate symporter FORC55_2730 PF07238 PilZ domain FORC55_2730 PF12945 Flagellar protein YcgR FORC55_2733 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2736 PF01048 Phosphorylase superfamily FORC55_2737 PF08349 Protein of unknown function (DUF1722) FORC55_2738 PF13411 MerR HTH family regulatory protein FORC55_2739 PF03441 FAD binding domain of DNA photolyase FORC55_2739 PF00875 DNA photolyase FORC55_2740 PF01476 LysM domain FORC55_2740 PF17969 L,D-transpeptidase C-terminal domain FORC55_2740 PF03734 L,D-transpeptidase catalytic domain FORC55_2742 PF00271 Helicase conserved C-terminal domain FORC55_2742 PF00270 DEAD/DEAH box helicase FORC55_2743 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FORC55_2743 PF00326 Prolyl oligopeptidase family FORC55_2744 PF00593 TonB dependent receptor FORC55_2744 PF07715 TonB-dependent Receptor Plug Domain FORC55_2748 PF12849 PBP superfamily domain FORC55_2749 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2750 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_2751 PF00005 ABC transporter FORC55_2752 PF03707 Bacterial signalling protein N terminal repeat FORC55_2752 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2752 PF00563 EAL domain FORC55_2755 PF01740 STAS domain FORC55_2755 PF00916 Sulfate permease family FORC55_2757 PF01476 LysM domain FORC55_2757 PF08525 Opacity-associated protein A N-terminal motif FORC55_2757 PF01551 Peptidase family M23 FORC55_2758 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2758 PF00360 Phytochrome region FORC55_2758 PF01590 GAF domain FORC55_2758 PF00563 EAL domain FORC55_2759 PF13185 GAF domain FORC55_2759 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2760 PF03466 LysR substrate binding domain FORC55_2760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_2761 PF07690 Major Facilitator Superfamily FORC55_2762 PF00376 MerR family regulatory protein FORC55_2762 PF09278 MerR, DNA binding FORC55_2765 PF00375 Sodium:dicarboxylate symporter family FORC55_2767 PF02001 Protein of unknown function DUF134 FORC55_2771 PF02868 Thermolysin metallopeptidase, alpha-helical domain FORC55_2771 PF01483 Proprotein convertase P-domain FORC55_2771 PF01447 Thermolysin metallopeptidase, catalytic domain FORC55_2771 PF07504 Fungalysin/Thermolysin Propeptide Motif FORC55_2773 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FORC55_2773 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FORC55_2774 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FORC55_2774 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FORC55_2775 PF00581 Rhodanese-like domain FORC55_2776 PF00563 EAL domain FORC55_2776 PF00196 Bacterial regulatory proteins, luxR family FORC55_2777 PF13419 Haloacid dehalogenase-like hydrolase FORC55_2778 PF01740 STAS domain FORC55_2778 PF00916 Sulfate permease family FORC55_2779 PF00849 RNA pseudouridylate synthase FORC55_2792 PF10431 C-terminal, D2-small domain, of ClpB protein FORC55_2792 PF00004 ATPase family associated with various cellular activities (AAA) FORC55_2792 PF07724 AAA domain (Cdc48 subfamily) FORC55_2792 PF17871 AAA lid domain FORC55_2798 PF04717 Type VI secretion system, phage-baseplate injector FORC55_2798 PF16671 Actin cross-linking domain FORC55_2803 PF03050 Transposase IS66 family FORC55_2803 PF13817 IS66 C-terminal element FORC55_2803 PF13007 Transposase C of IS166 homeodomain FORC55_2803 PF13005 zinc-finger binding domain of transposase IS66 FORC55_2806 PF05025 RbsD / FucU transport protein family FORC55_2807 PF00005 ABC transporter FORC55_2808 PF02653 Branched-chain amino acid transport system / permease component FORC55_2809 PF13407 Periplasmic binding protein domain FORC55_2810 PF00294 pfkB family carbohydrate kinase FORC55_2811 PF00356 Bacterial regulatory proteins, lacI family FORC55_2812 PF04973 Nicotinamide mononucleotide transporter FORC55_2816 PF03009 Glycerophosphoryl diester phosphodiesterase family FORC55_2817 PF07690 Major Facilitator Superfamily FORC55_2820 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2820 PF02743 Cache domain FORC55_2821 PF00158 Sigma-54 interaction domain FORC55_2821 PF02954 Bacterial regulatory protein, Fis family FORC55_2821 PF00072 Response regulator receiver domain FORC55_2824 PF01266 FAD dependent oxidoreductase FORC55_2825 PF12561 ToxR activated gene A lipoprotein domain FORC55_2825 PF00041 Fibronectin type III domain FORC55_2826 PF01327 Polypeptide deformylase FORC55_2827 PF03611 PTS system sugar-specific permease component FORC55_2829 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC55_2830 PF00356 Bacterial regulatory proteins, lacI family FORC55_2831 PF00042 Globin FORC55_2831 PF00970 Oxidoreductase FAD-binding domain FORC55_2831 PF00175 Oxidoreductase NAD-binding domain FORC55_2832 PF03334 Na+/H+ antiporter subunit FORC55_2833 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FORC55_2837 PF13244 Domain of unknown function (DUF4040) FORC55_2837 PF00361 Proton-conducting membrane transporter FORC55_2837 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FORC55_2837 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FORC55_2839 PF00582 Universal stress protein family FORC55_2840 PF03222 Tryptophan/tyrosine permease family FORC55_2841 PF01212 Beta-eliminating lyase FORC55_2843 PF12843 Putative quorum-sensing-regulated virulence factor FORC55_2845 PF00563 EAL domain FORC55_2845 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2845 PF08448 PAS fold FORC55_2846 PF00313 'Cold-shock' DNA-binding domain FORC55_2849 PF13519 von Willebrand factor type A domain FORC55_2849 PF07584 Aerotolerance regulator N-terminal FORC55_2852 PF01882 Protein of unknown function DUF58 FORC55_2853 PF17863 AAA lid domain FORC55_2853 PF07726 ATPase family associated with various cellular activities (AAA) FORC55_2854 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2854 PF00672 HAMP domain FORC55_2854 PF02743 Cache domain FORC55_2857 PF01773 Na+ dependent nucleoside transporter N-terminus FORC55_2857 PF07670 Nucleoside recognition FORC55_2857 PF07662 Na+ dependent nucleoside transporter C-terminus FORC55_2859 PF07687 Peptidase dimerisation domain FORC55_2859 PF01546 Peptidase family M20/M25/M40 FORC55_2861 PF01590 GAF domain FORC55_2861 PF00158 Sigma-54 interaction domain FORC55_2862 PF00175 Oxidoreductase NAD-binding domain FORC55_2862 PF00042 Globin FORC55_2862 PF00970 Oxidoreductase FAD-binding domain FORC55_2863 PF00313 'Cold-shock' DNA-binding domain FORC55_2864 PF03889 Alternative ribosome-rescue factor A FORC55_2866 PF13006 Insertion element 4 transposase N-terminal FORC55_2866 PF01609 Transposase DDE domain FORC55_2868 PF00072 Response regulator receiver domain FORC55_2870 PF01256 Carbohydrate kinase FORC55_2870 PF03853 YjeF-related protein N-terminus FORC55_2871 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC55_2871 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC55_2873 PF07885 Ion channel FORC55_2876 PF00478 IMP dehydrogenase / GMP reductase domain FORC55_2882 PF00271 Helicase conserved C-terminal domain FORC55_2882 PF00270 DEAD/DEAH box helicase FORC55_2883 PF03605 Anaerobic c4-dicarboxylate membrane transporter FORC55_2884 PF02540 NAD synthase FORC55_2885 PF01467 Cytidylyltransferase-like FORC55_2886 PF11849 Domain of unknown function (DUF3369) FORC55_2887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2887 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_2887 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2889 PF03553 Na+/H+ antiporter family FORC55_2890 PF07690 Major Facilitator Superfamily FORC55_2893 PF00990 Diguanylate cyclase, GGDEF domain FORC55_2893 PF08448 PAS fold FORC55_2894 PF00657 GDSL-like Lipase/Acylhydrolase FORC55_2895 PF07968 Leukocidin/Hemolysin toxin family FORC55_2895 PF12563 Hemolytic toxin N terminal FORC55_2895 PF16458 Beta-prism lectin FORC55_2896 PF12729 Four helix bundle sensory module for signal transduction FORC55_2896 PF00672 HAMP domain FORC55_2896 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2897 PF00561 alpha/beta hydrolase fold FORC55_2898 PF03280 Proteobacterial lipase chaperone protein FORC55_2899 PF05547 Immune inhibitor A peptidase M6 FORC55_2899 PF00801 PKD domain FORC55_2903 PF01032 FecCD transport family FORC55_2904 PF01032 FecCD transport family FORC55_2905 PF00005 ABC transporter FORC55_2906 PF12833 Helix-turn-helix domain FORC55_2907 PF00593 TonB dependent receptor FORC55_2907 PF07715 TonB-dependent Receptor Plug Domain FORC55_2908 PF01609 Transposase DDE domain FORC55_2908 PF13006 Insertion element 4 transposase N-terminal FORC55_2910 PF00871 Acetokinase family FORC55_2919 PF11798 IMS family HHH motif FORC55_2919 PF00817 impB/mucB/samB family FORC55_2919 PF13438 Domain of unknown function (DUF4113) FORC55_2919 PF11799 impB/mucB/samB family C-terminal domain FORC55_2920 PF00717 Peptidase S24-like FORC55_2928 PF14490 Helix-hairpin-helix containing domain FORC55_2928 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FORC55_2928 PF13538 UvrD-like helicase C-terminal domain FORC55_2930 PF13007 Transposase C of IS166 homeodomain FORC55_2930 PF13005 zinc-finger binding domain of transposase IS66 FORC55_2930 PF03050 Transposase IS66 family FORC55_2930 PF13817 IS66 C-terminal element FORC55_2933 PF01695 IstB-like ATP binding protein FORC55_2934 PF00665 Integrase core domain FORC55_2941 PF00816 H-NS histone family FORC55_2946 PF13737 Transposase DDE domain FORC55_2947 PF08668 HDOD domain FORC55_2947 PF00563 EAL domain FORC55_2948 PF13358 DDE superfamily endonuclease FORC55_2949 PF07804 HipA-like C-terminal domain FORC55_2949 PF13657 HipA N-terminal domain FORC55_2954 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2954 PF00672 HAMP domain FORC55_2955 PF00072 Response regulator receiver domain FORC55_2955 PF00486 Transcriptional regulatory protein, C terminal FORC55_2957 PF01261 Xylose isomerase-like TIM barrel FORC55_2958 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC55_2960 PF00596 Class II Aldolase and Adducin N-terminal domain FORC55_2961 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC55_2962 PF03611 PTS system sugar-specific permease component FORC55_2963 PF00455 DeoR C terminal sensor domain FORC55_2963 PF08220 DeoR-like helix-turn-helix domain FORC55_2968 PF00072 Response regulator receiver domain FORC55_2968 PF00486 Transcriptional regulatory protein, C terminal FORC55_2969 PF00672 HAMP domain FORC55_2969 PF14827 Double sensory domain of two-component sensor kinase FORC55_2969 PF00512 His Kinase A (phospho-acceptor) domain FORC55_2969 PF13426 PAS domain FORC55_2969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_2972 PF00873 AcrB/AcrD/AcrF family FORC55_2978 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_2978 PF00672 HAMP domain FORC55_2978 PF02743 Cache domain FORC55_2980 PF00768 D-alanyl-D-alanine carboxypeptidase FORC55_2980 PF07943 Penicillin-binding protein 5, C-terminal domain FORC55_2983 PF00194 Eukaryotic-type carbonic anhydrase FORC55_2984 PF02347 Glycine cleavage system P-protein FORC55_2985 PF01597 Glycine cleavage H-protein FORC55_2986 PF00464 Serine hydroxymethyltransferase FORC55_2988 PF01571 Aminomethyltransferase folate-binding domain FORC55_2988 PF08669 Glycine cleavage T-protein C-terminal barrel domain FORC55_2989 PF02824 TGS domain FORC55_2989 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FORC55_2989 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FORC55_2989 PF03129 Anticodon binding domain FORC55_2990 PF05198 Translation initiation factor IF-3, N-terminal domain FORC55_2990 PF00707 Translation initiation factor IF-3, C-terminal domain FORC55_2991 PF01632 Ribosomal protein L35 FORC55_2992 PF00453 Ribosomal protein L20 FORC55_2993 PF13495 Phage integrase, N-terminal SAM-like domain FORC55_2993 PF00589 Phage integrase family FORC55_3004 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FORC55_3005 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FORC55_3009 PF08212 Lipocalin-like domain FORC55_3030 PF13302 Acetyltransferase (GNAT) domain FORC55_3041 PF04229 GrpB protein FORC55_3054 PF03050 Transposase IS66 family FORC55_3054 PF13007 Transposase C of IS166 homeodomain FORC55_3054 PF13005 zinc-finger binding domain of transposase IS66 FORC55_3054 PF13817 IS66 C-terminal element FORC55_3057 PF03050 Transposase IS66 family FORC55_3057 PF13007 Transposase C of IS166 homeodomain FORC55_3057 PF13005 zinc-finger binding domain of transposase IS66 FORC55_3057 PF13817 IS66 C-terminal element FORC55_3058 PF13007 Transposase C of IS166 homeodomain FORC55_3058 PF13817 IS66 C-terminal element FORC55_3058 PF03050 Transposase IS66 family FORC55_3058 PF13005 zinc-finger binding domain of transposase IS66 FORC55_3070 PF02016 LD-carboxypeptidase N-terminal domain FORC55_3070 PF17676 LD-carboxypeptidase C-terminal domain FORC55_3083 PF04229 GrpB protein FORC55_3086 PF13302 Acetyltransferase (GNAT) domain FORC55_3087 PF13737 Transposase DDE domain FORC55_3089 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system FORC55_3090 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA FORC55_3091 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FORC55_3107 PF01695 IstB-like ATP binding protein FORC55_3108 PF00665 Integrase core domain FORC55_3118 PF13737 Transposase DDE domain FORC55_3122 PF13302 Acetyltransferase (GNAT) domain FORC55_3127 PF13005 zinc-finger binding domain of transposase IS66 FORC55_3127 PF13007 Transposase C of IS166 homeodomain FORC55_3127 PF03050 Transposase IS66 family FORC55_3127 PF13817 IS66 C-terminal element FORC55_3140 PF13302 Acetyltransferase (GNAT) domain FORC55_3142 PF04229 GrpB protein FORC55_3147 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FORC55_3148 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FORC55_3150 PF03477 ATP cone domain FORC55_3150 PF13597 Anaerobic ribonucleoside-triphosphate reductase FORC55_3152 PF00155 Aminotransferase class I and II FORC55_3153 PF08443 RimK-like ATP-grasp domain FORC55_3153 PF18030 RimK PreATP-grasp domain FORC55_3154 PF02378 Phosphotransferase system, EIIC FORC55_3154 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC55_3155 PF00294 pfkB family carbohydrate kinase FORC55_3156 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC55_3156 PF00381 PTS HPr component phosphorylation site FORC55_3157 PF00356 Bacterial regulatory proteins, lacI family FORC55_3157 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC55_3158 PF00149 Calcineurin-like phosphoesterase FORC55_3158 PF12320 Type 5 capsule protein repressor C-terminal domain FORC55_3159 PF13476 AAA domain FORC55_3160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3160 PF00072 Response regulator receiver domain FORC55_3161 PF00155 Aminotransferase class I and II FORC55_3162 PF13005 zinc-finger binding domain of transposase IS66 FORC55_3162 PF13817 IS66 C-terminal element FORC55_3162 PF13007 Transposase C of IS166 homeodomain FORC55_3162 PF03050 Transposase IS66 family FORC55_3165 PF00155 Aminotransferase class I and II FORC55_3167 PF00654 Voltage gated chloride channel FORC55_3168 PF02492 CobW/HypB/UreG, nucleotide-binding domain FORC55_3168 PF07683 Cobalamin synthesis protein cobW C-terminal domain FORC55_3169 PF01926 50S ribosome-binding GTPase FORC55_3171 PF00563 EAL domain FORC55_3171 PF10388 EAL-domain associated signalling protein domain FORC55_3173 PF01292 Prokaryotic cytochrome b561 FORC55_3174 PF04264 YceI-like domain FORC55_3175 PF01609 Transposase DDE domain FORC55_3175 PF13006 Insertion element 4 transposase N-terminal FORC55_3176 PF01226 Formate/nitrite transporter FORC55_3177 PF03466 LysR substrate binding domain FORC55_3177 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3178 PF06496 Protein of unknown function (DUF1097) FORC55_3179 PF11398 Protein of unknown function (DUF2813) FORC55_3181 PF00149 Calcineurin-like phosphoesterase FORC55_3181 PF02872 5'-nucleotidase, C-terminal domain FORC55_3182 PF03741 Integral membrane protein TerC family FORC55_3184 PF08274 PhnA Zinc-Ribbon FORC55_3184 PF03831 PhnA domain FORC55_3191 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3191 PF17151 Periplasmic sensor domain FORC55_3194 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3194 PF05230 MASE2 domain FORC55_3197 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FORC55_3197 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FORC55_3197 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FORC55_3198 PF02233 NAD(P) transhydrogenase beta subunit FORC55_3200 PF00072 Response regulator receiver domain FORC55_3200 PF00486 Transcriptional regulatory protein, C terminal FORC55_3203 PF03701 Uncharacterised protein family (UPF0181) FORC55_3204 PF01797 Transposase IS200 like FORC55_3205 PF01253 Translation initiation factor SUI1 FORC55_3207 PF01820 D-ala D-ala ligase N-terminus FORC55_3207 PF07478 D-ala D-ala ligase C-terminus FORC55_3209 PF13607 Succinyl-CoA ligase like flavodoxin domain FORC55_3209 PF00583 Acetyltransferase (GNAT) family FORC55_3209 PF13380 CoA binding domain FORC55_3210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3210 PF03466 LysR substrate binding domain FORC55_3211 PF07715 TonB-dependent Receptor Plug Domain FORC55_3211 PF00593 TonB dependent receptor FORC55_3212 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_3212 PF12793 Sugar transport-related sRNA regulator N-term FORC55_3214 PF03061 Thioesterase superfamily FORC55_3219 PF02798 Glutathione S-transferase, N-terminal domain FORC55_3219 PF00043 Glutathione S-transferase, C-terminal domain FORC55_3222 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_3222 PF12804 MobA-like NTP transferase domain FORC55_3222 PF03479 Plants and Prokaryotes Conserved (PCC) domain FORC55_3223 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_3223 PF00005 ABC transporter FORC55_3224 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_3224 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3225 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3226 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_3227 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC55_3232 PF00854 POT family FORC55_3235 PF07702 UTRA domain FORC55_3235 PF00392 Bacterial regulatory proteins, gntR family FORC55_3236 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3237 PF00005 ABC transporter FORC55_3239 PF00266 Aminotransferase class-V FORC55_3241 PF13419 Haloacid dehalogenase-like hydrolase FORC55_3242 PF14760 Rnk N-terminus FORC55_3242 PF01272 Transcription elongation factor, GreA/GreB, C-term FORC55_3243 PF00128 Alpha amylase, catalytic domain FORC55_3243 PF00686 Starch binding domain FORC55_3244 PF17912 MalK OB fold domain FORC55_3244 PF03459 TOBE domain FORC55_3244 PF00005 ABC transporter FORC55_3246 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_3246 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FORC55_3249 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3250 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3251 PF02903 Alpha amylase, N-terminal ig-like domain FORC55_3251 PF00128 Alpha amylase, catalytic domain FORC55_3251 PF16657 Maltogenic Amylase, C-terminal domain FORC55_3254 PF13419 Haloacid dehalogenase-like hydrolase FORC55_3257 PF01741 Large-conductance mechanosensitive channel, MscL FORC55_3258 PF01268 Formate--tetrahydrofolate ligase FORC55_3259 PF01625 Peptide methionine sulfoxide reductase FORC55_3259 PF01641 SelR domain FORC55_3260 PF01227 GTP cyclohydrolase I FORC55_3261 PF00994 Probable molybdopterin binding domain FORC55_3261 PF03453 MoeA N-terminal region (domain I and II) FORC55_3261 PF03454 MoeA C-terminal region (domain IV) FORC55_3262 PF00899 ThiF family FORC55_3264 PF00581 Rhodanese-like domain FORC55_3265 PF00704 Glycosyl hydrolases family 18 FORC55_3265 PF08329 Chitinase A, N-terminal domain FORC55_3266 PF04198 Putative sugar-binding domain FORC55_3267 PF00923 Transaldolase/Fructose-6-phosphate aldolase FORC55_3268 PF02780 Transketolase, C-terminal domain FORC55_3268 PF00456 Transketolase, thiamine diphosphate binding domain FORC55_3268 PF02779 Transketolase, pyrimidine binding domain FORC55_3275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC55_3275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC55_3278 PF06942 GlpM protein FORC55_3280 PF03466 LysR substrate binding domain FORC55_3280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3281 PF03992 Antibiotic biosynthesis monooxygenase FORC55_3282 PF00881 Nitroreductase family FORC55_3284 PF00873 AcrB/AcrD/AcrF family FORC55_3287 PF04143 Sulphur transport FORC55_3290 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC55_3290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC55_3299 PF00367 phosphotransferase system, EIIB FORC55_3299 PF02378 Phosphotransferase system, EIIC FORC55_3301 PF08244 Glycosyl hydrolases family 32 C terminal FORC55_3301 PF00251 Glycosyl hydrolases family 32 N-terminal domain FORC55_3302 PF00294 pfkB family carbohydrate kinase FORC55_3303 PF01266 FAD dependent oxidoreductase FORC55_3303 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FORC55_3304 PF17200 Single Cache domain 2 FORC55_3304 PF00672 HAMP domain FORC55_3304 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3305 PF00691 OmpA family FORC55_3305 PF05736 OprF membrane domain FORC55_3306 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FORC55_3306 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC55_3307 PF13419 Haloacid dehalogenase-like hydrolase FORC55_3311 PF02743 Cache domain FORC55_3311 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3311 PF00672 HAMP domain FORC55_3312 PF03606 C4-dicarboxylate anaerobic carrier FORC55_3313 PF03315 Serine dehydratase beta chain FORC55_3313 PF03313 Serine dehydratase alpha chain FORC55_3314 PF00072 Response regulator receiver domain FORC55_3314 PF00196 Bacterial regulatory proteins, luxR family FORC55_3315 PF00672 HAMP domain FORC55_3315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3315 PF07730 Histidine kinase FORC55_3315 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FORC55_3316 PF13187 4Fe-4S dicluster domain FORC55_3316 PF12838 4Fe-4S dicluster domain FORC55_3318 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FORC55_3318 PF01568 Molydopterin dinucleotide binding domain FORC55_3318 PF00384 Molybdopterin oxidoreductase FORC55_3319 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FORC55_3320 PF03264 NapC/NirT cytochrome c family, N-terminal region FORC55_3321 PF01966 HD domain FORC55_3322 PF00196 Bacterial regulatory proteins, luxR family FORC55_3322 PF00072 Response regulator receiver domain FORC55_3323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3323 PF07730 Histidine kinase FORC55_3323 PF05231 MASE1 FORC55_3324 PF07690 Major Facilitator Superfamily FORC55_3326 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3327 PF00005 ABC transporter FORC55_3327 PF08402 TOBE domain FORC55_3328 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FORC55_3330 PF00108 Thiolase, N-terminal domain FORC55_3330 PF02803 Thiolase, C-terminal domain FORC55_3331 PF13737 Transposase DDE domain FORC55_3332 PF00106 short chain dehydrogenase FORC55_3333 PF07549 SecD/SecF GG Motif FORC55_3333 PF02355 Protein export membrane protein FORC55_3334 PF02355 Protein export membrane protein FORC55_3334 PF13721 SecD export protein N-terminal TM region FORC55_3334 PF07549 SecD/SecF GG Motif FORC55_3337 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3337 PF17158 Membrane-associated sensor, integral membrane domain FORC55_3338 PF00483 Nucleotidyl transferase FORC55_3339 PF00704 Glycosyl hydrolases family 18 FORC55_3339 PF06483 Chitinase C FORC55_3340 PF00465 Iron-containing alcohol dehydrogenase FORC55_3342 PF00072 Response regulator receiver domain FORC55_3342 PF14532 Sigma-54 interaction domain FORC55_3342 PF02954 Bacterial regulatory protein, Fis family FORC55_3343 PF02743 Cache domain FORC55_3343 PF00512 His Kinase A (phospho-acceptor) domain FORC55_3343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3345 PF07690 Major Facilitator Superfamily FORC55_3346 PF00224 Pyruvate kinase, barrel domain FORC55_3346 PF02887 Pyruvate kinase, alpha/beta domain FORC55_3347 PF00512 His Kinase A (phospho-acceptor) domain FORC55_3347 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3347 PF00672 HAMP domain FORC55_3347 PF01627 Hpt domain FORC55_3347 PF00072 Response regulator receiver domain FORC55_3348 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC55_3349 PF02142 MGS-like domain FORC55_3350 PF00857 Isochorismatase family FORC55_3351 PF01219 Prokaryotic diacylglycerol kinase FORC55_3352 PF12462 DNA helicase IV / RNA helicase N terminal FORC55_3352 PF13361 UvrD-like helicase C-terminal domain FORC55_3352 PF00580 UvrD/REP helicase N-terminal domain FORC55_3353 PF12805 FUSC-like inner membrane protein yccS FORC55_3354 PF00512 His Kinase A (phospho-acceptor) domain FORC55_3354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3359 PF03459 TOBE domain FORC55_3359 PF00005 ABC transporter FORC55_3360 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3362 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FORC55_3362 PF07685 CobB/CobQ-like glutamine amidotransferase domain FORC55_3368 PF09308 LuxQ, periplasmic FORC55_3368 PF00512 His Kinase A (phospho-acceptor) domain FORC55_3368 PF00072 Response regulator receiver domain FORC55_3368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3369 PF13407 Periplasmic binding protein domain FORC55_3371 PF01541 GIY-YIG catalytic domain FORC55_3372 PF04337 Protein of unknown function, DUF480 FORC55_3374 PF04363 Protein of unknown function (DUF496) FORC55_3377 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FORC55_3377 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FORC55_3378 PF00230 Major intrinsic protein FORC55_3379 PF04324 BFD-like [2Fe-2S] binding domain FORC55_3379 PF01266 FAD dependent oxidoreductase FORC55_3380 PF00890 FAD binding domain FORC55_3381 PF02754 Cysteine-rich domain FORC55_3381 PF13183 4Fe-4S dicluster domain FORC55_3382 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FORC55_3382 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FORC55_3383 PF00085 Thioredoxin FORC55_3385 PF07690 Major Facilitator Superfamily FORC55_3388 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3389 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_3391 PF00005 ABC transporter FORC55_3393 PF05762 VWA domain containing CoxE-like protein FORC55_3394 PF12592 Protein of unknown function (DUF3763) FORC55_3394 PF17868 AAA lid domain FORC55_3394 PF07728 AAA domain (dynein-related subfamily) FORC55_3395 PF00293 NUDIX domain FORC55_3396 PF01212 Beta-eliminating lyase FORC55_3397 PF00034 Cytochrome c FORC55_3398 PF08361 MAATS-type transcriptional repressor, C-terminal region FORC55_3398 PF00440 Bacterial regulatory proteins, tetR family FORC55_3399 PF00270 DEAD/DEAH box helicase FORC55_3399 PF00271 Helicase conserved C-terminal domain FORC55_3400 PF04336 Acyl carrier protein phosphodiesterase FORC55_3401 PF03222 Tryptophan/tyrosine permease family FORC55_3403 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3403 PF00672 HAMP domain FORC55_3403 PF02743 Cache domain FORC55_3404 PF16363 GDP-mannose 4,6 dehydratase FORC55_3405 PF03746 LamB/YcsF family FORC55_3407 PF02626 Carboxyltransferase domain, subdomain A and B FORC55_3409 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FORC55_3409 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FORC55_3411 PF00005 ABC transporter FORC55_3412 PF13472 GDSL-like Lipase/Acylhydrolase family FORC55_3413 PF12241 Trans-2-enoyl-CoA reductase catalytic region FORC55_3413 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FORC55_3413 PF07055 Enoyl reductase FAD binding domain FORC55_3414 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3414 PF00498 FHA domain FORC55_3414 PF00563 EAL domain FORC55_3416 PF00226 DnaJ domain FORC55_3416 PF01556 DnaJ C terminal domain FORC55_3416 PF00684 DnaJ central domain FORC55_3419 PF13419 Haloacid dehalogenase-like hydrolase FORC55_3422 PF00294 pfkB family carbohydrate kinase FORC55_3424 PF00271 Helicase conserved C-terminal domain FORC55_3424 PF00270 DEAD/DEAH box helicase FORC55_3424 PF03880 DbpA RNA binding domain FORC55_3425 PF08206 Ribonuclease B OB domain FORC55_3425 PF00575 S1 RNA binding domain FORC55_3425 PF00773 RNB domain FORC55_3427 PF12849 PBP superfamily domain FORC55_3428 PF01575 MaoC like domain FORC55_3429 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FORC55_3430 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FORC55_3430 PF18416 N-acetylglucosamine binding protein domain 2 FORC55_3432 PF04389 Peptidase family M28 FORC55_3432 PF04151 Bacterial pre-peptidase C-terminal domain FORC55_3433 PF00491 Arginase family FORC55_3434 PF17810 Arginine decarboxylase helical bundle domain FORC55_3434 PF17944 Arginine decarboxylase C-terminal helical extension FORC55_3434 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FORC55_3436 PF03448 MgtE intracellular N domain FORC55_3436 PF01769 Divalent cation transporter FORC55_3436 PF00571 CBS domain FORC55_3437 PF00166 Chaperonin 10 Kd subunit FORC55_3438 PF00118 TCP-1/cpn60 chaperonin family FORC55_3440 PF13840 ACT domain FORC55_3440 PF00696 Amino acid kinase family FORC55_3441 PF06339 Ectoine synthase FORC55_3442 PF00202 Aminotransferase class-III FORC55_3443 PF00583 Acetyltransferase (GNAT) family FORC55_3444 PF01329 Pterin 4 alpha carbinolamine dehydratase FORC55_3445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FORC55_3446 PF13193 AMP-binding enzyme C-terminal domain FORC55_3446 PF00501 AMP-binding enzyme FORC55_3450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3450 PF03466 LysR substrate binding domain FORC55_3452 PF00892 EamA-like transporter family FORC55_3453 PF14602 Hexapeptide repeat of succinyl-transferase FORC55_3453 PF00132 Bacterial transferase hexapeptide (six repeats) FORC55_3453 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FORC55_3454 PF01595 Cyclin M transmembrane N-terminal domain FORC55_3454 PF03471 Transporter associated domain FORC55_3454 PF00571 CBS domain FORC55_3455 PF02566 OsmC-like protein FORC55_3456 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FORC55_3458 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC55_3458 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC55_3461 PF13520 Amino acid permease FORC55_3463 PF00248 Aldo/keto reductase family FORC55_3464 PF00128 Alpha amylase, catalytic domain FORC55_3465 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC55_3466 PF12262 Bacterial virulence factor lipase N-terminal FORC55_3467 PF12262 Bacterial virulence factor lipase N-terminal FORC55_3468 PF13426 PAS domain FORC55_3468 PF08447 PAS fold FORC55_3468 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3469 PF07504 Fungalysin/Thermolysin Propeptide Motif FORC55_3469 PF03413 Peptidase propeptide and YPEB domain FORC55_3469 PF04151 Bacterial pre-peptidase C-terminal domain FORC55_3469 PF02868 Thermolysin metallopeptidase, alpha-helical domain FORC55_3469 PF01447 Thermolysin metallopeptidase, catalytic domain FORC55_3470 PF03922 OmpW family FORC55_3473 PF00768 D-alanyl-D-alanine carboxypeptidase FORC55_3474 PF08206 Ribonuclease B OB domain FORC55_3474 PF00773 RNB domain FORC55_3474 PF08461 Ribonuclease R winged-helix domain FORC55_3474 PF00575 S1 RNA binding domain FORC55_3474 PF17876 Cold shock domain FORC55_3475 PF00313 'Cold-shock' DNA-binding domain FORC55_3477 PF00196 Bacterial regulatory proteins, luxR family FORC55_3477 PF00563 EAL domain FORC55_3478 PF00107 Zinc-binding dehydrogenase FORC55_3478 PF08240 Alcohol dehydrogenase GroES-like domain FORC55_3479 PF00155 Aminotransferase class I and II FORC55_3480 PF01053 Cys/Met metabolism PLP-dependent enzyme FORC55_3481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3481 PF03466 LysR substrate binding domain FORC55_3482 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC55_3488 PF01966 HD domain FORC55_3489 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FORC55_3489 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FORC55_3490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FORC55_3491 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FORC55_3491 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FORC55_3495 PF02595 Glycerate kinase family FORC55_3496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3496 PF00672 HAMP domain FORC55_3497 PF01243 Pyridoxamine 5'-phosphate oxidase FORC55_3498 PF06228 Haem utilisation ChuX/HutX FORC55_3499 PF04055 Radical SAM superfamily FORC55_3500 PF03544 Gram-negative bacterial TonB protein C-terminal FORC55_3501 PF01618 MotA/TolQ/ExbB proton channel family FORC55_3502 PF02472 Biopolymer transport protein ExbD/TolR FORC55_3503 PF01497 Periplasmic binding protein FORC55_3504 PF01032 FecCD transport family FORC55_3505 PF00005 ABC transporter FORC55_3511 PF02743 Cache domain FORC55_3511 PF00672 HAMP domain FORC55_3511 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3512 PF03476 MOSC N-terminal beta barrel domain FORC55_3512 PF03473 MOSC domain FORC55_3512 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_3512 PF03473 MOSC domain FORC55_3512 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC55_3512 PF03476 MOSC N-terminal beta barrel domain FORC55_3513 PF01979 Amidohydrolase family FORC55_3516 PF05656 Protein of unknown function (DUF805) FORC55_3518 PF05958 tRNA (Uracil-5-)-methyltransferase FORC55_3519 PF05661 Protein of unknown function (DUF808) FORC55_3521 PF00313 'Cold-shock' DNA-binding domain FORC55_3526 PF08448 PAS fold FORC55_3526 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3527 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3527 PF08448 PAS fold FORC55_3528 PF08220 DeoR-like helix-turn-helix domain FORC55_3528 PF00455 DeoR C terminal sensor domain FORC55_3531 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3532 PF14785 Maltose transport system permease protein MalF P2 domain FORC55_3532 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3533 PF01547 Bacterial extracellular solute-binding protein FORC55_3534 PF08402 TOBE domain FORC55_3534 PF00005 ABC transporter FORC55_3535 PF13302 Acetyltransferase (GNAT) domain FORC55_3538 PF01906 Putative heavy-metal-binding FORC55_3539 PF00196 Bacterial regulatory proteins, luxR family FORC55_3541 PF00072 Response regulator receiver domain FORC55_3541 PF01584 CheW-like domain FORC55_3542 PF01047 MarR family FORC55_3543 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3547 PF00563 EAL domain FORC55_3547 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3547 PF03707 Bacterial signalling protein N terminal repeat FORC55_3551 PF03466 LysR substrate binding domain FORC55_3551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3552 PF00990 Diguanylate cyclase, GGDEF domain FORC55_3552 PF00563 EAL domain FORC55_3554 PF02678 Pirin FORC55_3554 PF05726 Pirin C-terminal cupin domain FORC55_3555 PF06865 Pyrimidine/purine nucleoside phosphorylase FORC55_3557 PF07690 Major Facilitator Superfamily FORC55_3558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3558 PF12729 Four helix bundle sensory module for signal transduction FORC55_3558 PF00672 HAMP domain FORC55_3559 PF13654 AAA domain FORC55_3559 PF05362 Lon protease (S16) C-terminal proteolytic domain FORC55_3561 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_3561 PF00005 ABC transporter FORC55_3562 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_3565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3565 PF03466 LysR substrate binding domain FORC55_3566 PF02652 L-lactate permease FORC55_3567 PF01070 FMN-dependent dehydrogenase FORC55_3569 PF03618 Kinase/pyrophosphorylase FORC55_3571 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FORC55_3571 PF02896 PEP-utilising enzyme, TIM barrel domain FORC55_3571 PF00391 PEP-utilising enzyme, mobile domain FORC55_3572 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3572 PF08447 PAS fold FORC55_3573 PF01554 MatE FORC55_3574 PF00271 Helicase conserved C-terminal domain FORC55_3574 PF00270 DEAD/DEAH box helicase FORC55_3575 PF12833 Helix-turn-helix domain FORC55_3576 PF02627 Carboxymuconolactone decarboxylase family FORC55_3578 PF00005 ABC transporter FORC55_3578 PF00664 ABC transporter transmembrane region FORC55_3580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FORC55_3582 PF01810 LysE type translocator FORC55_3583 PF12833 Helix-turn-helix domain FORC55_3586 PF01557 Fumarylacetoacetate (FAA) hydrolase family FORC55_3587 PF01047 MarR family FORC55_3588 PF02566 OsmC-like protein FORC55_3589 PF13609 Gram-negative porin FORC55_3590 PF00892 EamA-like transporter family FORC55_3591 PF00462 Glutaredoxin FORC55_3592 PF07670 Nucleoside recognition FORC55_3593 PF07670 Nucleoside recognition FORC55_3594 PF03600 Citrate transporter FORC55_3596 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FORC55_3596 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FORC55_3597 PF06029 AlkA N-terminal domain FORC55_3597 PF00730 HhH-GPD superfamily base excision DNA repair protein FORC55_3598 PF07681 DoxX FORC55_3599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3599 PF03466 LysR substrate binding domain FORC55_3603 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FORC55_3605 PF07148 Maltose operon periplasmic protein precursor (MalM) FORC55_3606 PF02264 LamB porin FORC55_3607 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FORC55_3607 PF00128 Alpha amylase, catalytic domain FORC55_3609 PF12729 Four helix bundle sensory module for signal transduction FORC55_3609 PF00672 HAMP domain FORC55_3609 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3611 PF00672 HAMP domain FORC55_3611 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3613 PF00793 DAHP synthetase I family FORC55_3614 PF00005 ABC transporter FORC55_3615 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3616 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC55_3617 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3618 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC55_3618 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC55_3618 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC55_3618 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC55_3620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC55_3620 PF02378 Phosphotransferase system, EIIC FORC55_3620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC55_3621 PF08125 Mannitol dehydrogenase C-terminal domain FORC55_3621 PF01232 Mannitol dehydrogenase Rossmann domain FORC55_3622 PF05068 Mannitol repressor FORC55_3623 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FORC55_3624 PF13006 Insertion element 4 transposase N-terminal FORC55_3624 PF01609 Transposase DDE domain FORC55_3629 PF00892 EamA-like transporter family FORC55_3632 PF00857 Isochorismatase family FORC55_3634 PF13460 NAD(P)H-binding FORC55_3635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3635 PF03466 LysR substrate binding domain FORC55_3636 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3636 PF02743 Cache domain FORC55_3636 PF00672 HAMP domain FORC55_3637 PF00106 short chain dehydrogenase FORC55_3638 PF03466 LysR substrate binding domain FORC55_3638 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC55_3639 PF04013 Putative SAM-dependent RNA methyltransferase FORC55_3640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FORC55_3641 PF13520 Amino acid permease FORC55_3642 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FORC55_3642 PF01276 Orn/Lys/Arg decarboxylase, major domain FORC55_3642 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FORC55_3644 PF00171 Aldehyde dehydrogenase family FORC55_3645 PF01037 Lrp/AsnC ligand binding domain FORC55_3646 PF02743 Cache domain FORC55_3646 PF00672 HAMP domain FORC55_3646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3648 PF00474 Sodium:solute symporter family FORC55_3650 PF00171 Aldehyde dehydrogenase family FORC55_3650 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FORC55_3650 PF01619 Proline dehydrogenase FORC55_3650 PF14850 DNA-binding domain of Proline dehydrogenase FORC55_3651 PF12833 Helix-turn-helix domain FORC55_3653 PF03781 Sulfatase-modifying factor enzyme 1 FORC55_3654 PF00196 Bacterial regulatory proteins, luxR family FORC55_3654 PF00072 Response regulator receiver domain FORC55_3655 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FORC55_3655 PF01243 Pyridoxamine 5'-phosphate oxidase FORC55_3656 PF00529 HlyD membrane-fusion protein of T1SS FORC55_3659 PF00664 ABC transporter transmembrane region FORC55_3659 PF03412 Peptidase C39 family FORC55_3659 PF00005 ABC transporter FORC55_3661 PF00486 Transcriptional regulatory protein, C terminal FORC55_3661 PF00072 Response regulator receiver domain FORC55_3663 PF00672 HAMP domain FORC55_3663 PF02743 Cache domain FORC55_3663 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3664 PF01339 CheB methylesterase FORC55_3664 PF00072 Response regulator receiver domain FORC55_3665 PF03975 CheD chemotactic sensory transduction FORC55_3666 PF01739 CheR methyltransferase, SAM binding domain FORC55_3666 PF03705 CheR methyltransferase, all-alpha domain FORC55_3667 PF00672 HAMP domain FORC55_3667 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC55_3667 PF02203 Tar ligand binding domain homologue FORC55_3668 PF01584 CheW-like domain FORC55_3669 PF01584 CheW-like domain FORC55_3670 PF01627 Hpt domain FORC55_3670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3670 PF02895 Signal transducing histidine kinase, homodimeric domain FORC55_3670 PF01584 CheW-like domain FORC55_3670 PF09078 CheY binding FORC55_3671 PF00072 Response regulator receiver domain FORC55_3674 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3675 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC55_3675 PF00528 Binding-protein-dependent transport system inner membrane component FORC55_3676 PF00005 ABC transporter FORC55_3676 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC55_3677 PF00884 Sulfatase FORC55_3677 PF08019 Phosphoethanolamine transferase EptA/EptB FORC55_3678 PF00512 His Kinase A (phospho-acceptor) domain FORC55_3678 PF08521 Two-component sensor kinase N-terminal FORC55_3678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC55_3679 PF00486 Transcriptional regulatory protein, C terminal FORC55_3679 PF00072 Response regulator receiver domain FORC55_3683 PF00501 AMP-binding enzyme FORC55_3685 PF13718 GNAT acetyltransferase 2 FORC55_3685 PF05127 Helicase FORC55_3686 PF13416 Bacterial extracellular solute-binding protein